GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001854-TA|BGIBMGA001854-PA|undefined
         (350 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2173|AAF58067.2|  995|Drosophila melanogaster CG8414-PA...    91   2e-18
AY070613-1|AAL48084.1|  995|Drosophila melanogaster RE71565p pro...    90   4e-18
AY061187-1|AAL28735.1|  423|Drosophila melanogaster LD15072p pro...    35   0.19 
AE013599-1720|AAF58372.1|  423|Drosophila melanogaster CG5970-PA...    35   0.19 
AE014134-3169|AAS64723.1| 1124|Drosophila melanogaster CG33316-P...    30   4.1  
AE014134-3168|AAS64722.1| 1249|Drosophila melanogaster CG33316-P...    30   4.1  
AY122065-1|AAM52577.1| 1124|Drosophila melanogaster AT07927p pro...    30   5.5  
BT022570-1|AAY54986.1|  187|Drosophila melanogaster IP06602p pro...    29   9.6  
BT022513-1|AAY54929.1|  189|Drosophila melanogaster IP06402p pro...    29   9.6  
AY071035-1|AAL48657.1|  233|Drosophila melanogaster RE11961p pro...    29   9.6  
AY070835-1|AAL48457.1|  233|Drosophila melanogaster GH06691p pro...    29   9.6  
AE014296-3462|AAF51671.2|  189|Drosophila melanogaster CG10581-P...    29   9.6  
AE014296-1844|AAF50139.1|  233|Drosophila melanogaster CG11811-P...    29   9.6  

>AE013599-2173|AAF58067.2|  995|Drosophila melanogaster CG8414-PA
           protein.
          Length = 995

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 86/310 (27%), Positives = 136/310 (43%), Gaps = 25/310 (8%)

Query: 54  LVPELGDVAVIDELEVETNPETLTEIASIAVDETMPSENISNEEDSVDFTN-KPNLDSVQ 112
           +V  L  V    E EV    E   E+ S+    T   EN     D   + N + N   + 
Sbjct: 404 VVKNLSSVPPKKESEVAIETEENDEV-SLPEVVTPEKENYLQPSDVPFYRNPQANPTELS 462

Query: 113 IYYGT---KHCVFVLKHPAILYFHGKVTMRALGGQMEVFGYNLKDQYQ-EVYAPR-LNYA 167
           ++  +    H + V+K    +Y  G + +  L GQ+ V GY  + Q    +Y+P+ LN+ 
Sbjct: 463 VFENSLKSNHVLAVIKEDLEVY--GTLVLTLLCGQISVNGYRARRQEAITIYSPKGLNWV 520

Query: 168 L-----SVKTVESENNYQGLFSKLTAVGISVKEAEEIVTTLGEYDGILSLGPLKDLKMDF 222
                 + K V+ E N++ L    T       + + I T+       + L          
Sbjct: 521 SISPTKTKKPVKDEVNWEELNKNFTRA-----QLDRIKTSFQRQTNAIVLLHRNTSAQQL 575

Query: 223 VEN--NFSICELFTKTKNVQSCFHRASDILGCSLYLKRPLRTYEERPQWEQAYTYGTDPG 280
           V+         +F    +    F ++  +L C +      RT +    W +   + T   
Sbjct: 576 VDTFGKHMAQNVFPLVNSSNRPFGQSETLLHCLIQSSDQSRTLQVPQVWNKLQMHAT--- 632

Query: 281 ARGIICGGKGTGKSTMLRYLCNRLLDHGP-VLVIDLDPGQAEFTVAGNLSVTIVNEPLLG 339
           +R I+ GGKG GKS++LRYL NR L   P +L+IDLD GQ E  V   +S T+++EPLLG
Sbjct: 633 SRIIVAGGKGVGKSSLLRYLINRNLGQFPSMLLIDLDIGQPEIFVPQTISCTVIDEPLLG 692

Query: 340 PNFTHLKTPE 349
           P F + + PE
Sbjct: 693 PGFLYNRQPE 702


>AY070613-1|AAL48084.1|  995|Drosophila melanogaster RE71565p
           protein.
          Length = 995

 Score = 90.2 bits (214), Expect = 4e-18
 Identities = 86/310 (27%), Positives = 136/310 (43%), Gaps = 25/310 (8%)

Query: 54  LVPELGDVAVIDELEVETNPETLTEIASIAVDETMPSENISNEEDSVDFTN-KPNLDSVQ 112
           +V  L  V    E EV    E   E+ S+    T   EN     D   + N + N   + 
Sbjct: 404 VVKNLSSVPPKKESEVAIETEENDEV-SLPEVVTPEKENYLQPSDVPFYRNPQANPTELS 462

Query: 113 IYYGT---KHCVFVLKHPAILYFHGKVTMRALGGQMEVFGYNLKDQYQ-EVYAPR-LNYA 167
           ++  +    H + V+K    +Y  G + +  L GQ+ V GY  + Q    +Y+P+ LN+ 
Sbjct: 463 VFENSLKSNHVLAVIKEDLEVY--GTLVLTLLCGQISVNGYRARRQEAITIYSPKGLNWV 520

Query: 168 L-----SVKTVESENNYQGLFSKLTAVGISVKEAEEIVTTLGEYDGILSLGPLKDLKMDF 222
                 + K V+ E N++ L    T       + + I T+       + L          
Sbjct: 521 SISPTKTKKPVKDEVNWEELNKNFTRA-----QLDGIKTSFQRQTNAIVLLHRNTSAQQL 575

Query: 223 VEN--NFSICELFTKTKNVQSCFHRASDILGCSLYLKRPLRTYEERPQWEQAYTYGTDPG 280
           V+         +F    +    F ++  +L C +      RT +    W +   + T   
Sbjct: 576 VDTFGKHMAQNVFPLVNSSNRPFGQSETLLHCLIQSSDQSRTLQVPQVWNKLQMHAT--- 632

Query: 281 ARGIICGGKGTGKSTMLRYLCNRLLDHGP-VLVIDLDPGQAEFTVAGNLSVTIVNEPLLG 339
           +R I+ GGKG GKS++LRYL NR L   P +L+IDLD GQ E  V   +S T+++EPLLG
Sbjct: 633 SRIIVAGGKGVGKSSLLRYLINRNLGQFPSMLLIDLDIGQPEIFVPQTISCTVIDEPLLG 692

Query: 340 PNFTHLKTPE 349
           P F + + PE
Sbjct: 693 PGFLYNRQPE 702


>AY061187-1|AAL28735.1|  423|Drosophila melanogaster LD15072p
           protein.
          Length = 423

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 280 GARGIICGGKGTGKSTMLRYLCNRLLDHGP-VLVIDLDPGQAEFTVAGNLSVTIVNEP 336
           G   ++ G    GKST+ R L N  +  G   L  DLD GQ    ++G+++  ++  P
Sbjct: 109 GPVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERP 166


>AE013599-1720|AAF58372.1|  423|Drosophila melanogaster CG5970-PA
           protein.
          Length = 423

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 280 GARGIICGGKGTGKSTMLRYLCNRLLDHGP-VLVIDLDPGQAEFTVAGNLSVTIVNEP 336
           G   ++ G    GKST+ R L N  +  G   L  DLD GQ    ++G+++  ++  P
Sbjct: 109 GPVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERP 166


>AE014134-3169|AAS64723.1| 1124|Drosophila melanogaster CG33316-PB,
           isoform B protein.
          Length = 1124

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 17/65 (26%), Positives = 32/65 (49%)

Query: 127 PAILYFHGKVTMRALGGQMEVFGYNLKDQYQEVYAPRLNYALSVKTVESENNYQGLFSKL 186
           PA+     K+     GG  ++ G    ++   V +PR+N + S+++ +SE  Y  + S+ 
Sbjct: 874 PALTRHGHKMIHNRSGGPGQMAGQMSGNESPYVQSPRMNRSNSIRSTKSEKMYPSMMSRA 933

Query: 187 TAVGI 191
             V I
Sbjct: 934 GEVEI 938


>AE014134-3168|AAS64722.1| 1249|Drosophila melanogaster CG33316-PA,
            isoform A protein.
          Length = 1249

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 17/65 (26%), Positives = 32/65 (49%)

Query: 127  PAILYFHGKVTMRALGGQMEVFGYNLKDQYQEVYAPRLNYALSVKTVESENNYQGLFSKL 186
            PA+     K+     GG  ++ G    ++   V +PR+N + S+++ +SE  Y  + S+ 
Sbjct: 999  PALTRHGHKMIHNRSGGPGQMAGQMSGNESPYVQSPRMNRSNSIRSTKSEKMYPSMMSRA 1058

Query: 187  TAVGI 191
              V I
Sbjct: 1059 GEVEI 1063


>AY122065-1|AAM52577.1| 1124|Drosophila melanogaster AT07927p
           protein.
          Length = 1124

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 17/65 (26%), Positives = 32/65 (49%)

Query: 127 PAILYFHGKVTMRALGGQMEVFGYNLKDQYQEVYAPRLNYALSVKTVESENNYQGLFSKL 186
           PA+     K+     GG  ++ G    ++   V +PR+N + S+++ +SE  Y  + S+ 
Sbjct: 874 PAMTRHGHKMIHNRSGGPGQMAGQMSGNESPYVQSPRMNRSNSIRSTKSEKMYPSMMSRA 933

Query: 187 TAVGI 191
             V I
Sbjct: 934 GEVEI 938


>BT022570-1|AAY54986.1|  187|Drosophila melanogaster IP06602p
           protein.
          Length = 187

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 284 IICGGKGTGKSTMLRYLCNRLLDHGPVL 311
           I+ G  G GK+T++  +C+ L D G +L
Sbjct: 10  ILTGPPGVGKTTLVHKICSALQDRGRIL 37


>BT022513-1|AAY54929.1|  189|Drosophila melanogaster IP06402p
           protein.
          Length = 189

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 284 IICGGKGTGKSTMLRYLCNRLLDHGPVL 311
           I+ G  G GK+T++  +C+ L D G +L
Sbjct: 10  ILTGPPGVGKTTLVHKICSALQDRGRIL 37


>AY071035-1|AAL48657.1|  233|Drosophila melanogaster RE11961p
           protein.
          Length = 233

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)

Query: 277 TDPGARGII-CGGKGTGKSTMLRYL 300
           T PG R ++ CG  G+GKST+L+ L
Sbjct: 31  TAPGPRPLVLCGPSGSGKSTLLKRL 55


>AY070835-1|AAL48457.1|  233|Drosophila melanogaster GH06691p
           protein.
          Length = 233

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)

Query: 277 TDPGARGII-CGGKGTGKSTMLRYL 300
           T PG R ++ CG  G+GKST+L+ L
Sbjct: 31  TAPGPRPLVLCGPSGSGKSTLLKRL 55


>AE014296-3462|AAF51671.2|  189|Drosophila melanogaster CG10581-PA
           protein.
          Length = 189

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 284 IICGGKGTGKSTMLRYLCNRLLDHGPVL 311
           I+ G  G GK+T++  +C+ L D G +L
Sbjct: 10  ILTGPPGVGKTTLVHKICSALQDRGRIL 37


>AE014296-1844|AAF50139.1|  233|Drosophila melanogaster CG11811-PA
           protein.
          Length = 233

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)

Query: 277 TDPGARGII-CGGKGTGKSTMLRYL 300
           T PG R ++ CG  G+GKST+L+ L
Sbjct: 31  TAPGPRPLVLCGPSGSGKSTLLKRL 55


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.136    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,096,173
Number of Sequences: 52641
Number of extensions: 710491
Number of successful extensions: 1557
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1543
Number of HSP's gapped (non-prelim): 15
length of query: 350
length of database: 24,830,863
effective HSP length: 86
effective length of query: 264
effective length of database: 20,303,737
effective search space: 5360186568
effective search space used: 5360186568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)