Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001854-TA|BGIBMGA001854-PA|undefined
(350 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 3.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 5.2
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 5.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 5.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 5.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 5.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 5.2
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 23 5.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.9
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 6.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 6.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.9
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 9.1
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 3.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 162 PRLNYALSVKTVESENNYQGLFSKLTAVGISVKEAEEIVTTLGEYDG 208
P++ +LS KT+ + NNY +K I+ E + + Y G
Sbjct: 301 PKIISSLSNKTIHNNNNYNNYNNKKLYYNINYIEQIPVPVPVPIYYG 347
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.4 bits (48), Expect = 3.0
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 169 SVKTVESENNYQGLFSKLTAVGISVKEAEEIV 200
S+ + ++N+ QGLFSKL A VK+ ++I+
Sbjct: 677 SLPSTLTKNSKQGLFSKLFAK--KVKKDKDII 706
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 162 PRLNYALSVKTVESENNYQ 180
P++ +LS KT+ + NNY+
Sbjct: 79 PKIISSLSNKTIHNNNNYK 97
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 162 PRLNYALSVKTVESENNYQ 180
P++ +LS KT+ + NNY+
Sbjct: 79 PKIISSLSNKTIHNNNNYK 97
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 162 PRLNYALSVKTVESENNYQ 180
P++ +LS KT+ + NNY+
Sbjct: 79 PKIISSLSNKTIHNNNNYK 97
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 162 PRLNYALSVKTVESENNYQ 180
P++ +LS KT+ + NNY+
Sbjct: 79 PKIISSLSNKTIHNNNNYK 97
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 162 PRLNYALSVKTVESENNYQ 180
P++ +LS KT+ + NNY+
Sbjct: 79 PKIISSLSNKTIHNNNNYK 97
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 162 PRLNYALSVKTVESENNYQ 180
P++ +LS KT+ + NNY+
Sbjct: 312 PKIISSLSNKTIHNNNNYK 330
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 22.6 bits (46), Expect = 5.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 214 PLKDLKMDFVENNFSICELFTKTKNV 239
PLK +F N + +FT ++N+
Sbjct: 143 PLKQRSSEFCGKNIGMKRIFTSSQNI 168
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.2 bits (45), Expect = 6.9
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 68 EVETNPETLTEIASIAVDETMPSENISNEEDSVDFTNKPNLDSVQIY 114
E ++N + + S+ ++ + +E +NE + F N+ SV ++
Sbjct: 391 ETQSNYREMEKRQSVPANDLLTTEKDNNEIVTAQFLNQLKKSSVLVH 437
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 6.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 61 VAVIDELEVETNPETLTEIASIAVD 85
+A++D L ETN TL E A D
Sbjct: 376 LAIVDRLMDETNQLTLQETADAFKD 400
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 162 PRLNYALSVKTVESENNY 179
P++ +LS KT+ + NNY
Sbjct: 79 PKIISSLSNKTIHNNNNY 96
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 162 PRLNYALSVKTVESENNY 179
P++ +LS KT+ + NNY
Sbjct: 79 PKIISSLSNKTIHNNNNY 96
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 6.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 162 PRLNYALSVKTVESENNY 179
P++ +LS KT+ + NNY
Sbjct: 312 PKIISSLSNKTIHNNNNY 329
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 167 ALSVKTVESENNYQGLFSKL 186
+LS KT+ + NNY+ KL
Sbjct: 317 SLSNKTIHNNNNYKNYNKKL 336
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 9.1
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 77 TEIASIAVDETMPS---ENISNEEDSVDFT 103
T + I + ETMP EN+ N + +D T
Sbjct: 324 TTVHRICIGETMPMELIENLRNHPEYIDET 353
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.136 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,883
Number of Sequences: 429
Number of extensions: 3860
Number of successful extensions: 26
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 17
length of query: 350
length of database: 140,377
effective HSP length: 58
effective length of query: 292
effective length of database: 115,495
effective search space: 33724540
effective search space used: 33724540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)
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