Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001853-TA|BGIBMGA001853-PA|IPR005294|ATPase, F1 complex,
alpha subunit, IPR000793|ATPase, F1/V1/A1 complex, alpha/beta subunit,
C-terminal, IPR004100|ATPase, F1/V1/A1 complex, alpha/beta subunit,
N-terminal, IPR000194|ATPase, F1/V1/A1 complex, alpha/beta subunit,
nucleotide-binding
(553 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 970 0.0
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 924 0.0
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 699 0.0
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 589 e-167
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 557 e-157
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 556 e-157
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 556 e-157
UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto... 513 e-144
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 502 e-140
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 501 e-140
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 456 e-127
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 444 e-123
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 444 e-123
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 439 e-122
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 431 e-119
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 427 e-118
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 412 e-113
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 409 e-113
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 400 e-110
UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae... 387 e-106
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 380 e-104
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 350 5e-95
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 344 4e-93
UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n... 314 3e-84
UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas... 296 1e-78
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 281 5e-74
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 248 4e-64
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 241 3e-62
UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplas... 241 4e-62
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 237 4e-61
UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplas... 233 1e-59
UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplas... 225 3e-57
UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplas... 225 3e-57
UniRef50_UPI000023E632 Cluster: hypothetical protein FG01079.1; ... 222 2e-56
UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor... 194 4e-48
UniRef50_Q9RQ78 Cluster: Alpha subunit of membrane-bound ATP syn... 192 2e-47
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 161 4e-38
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 157 9e-37
UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ... 154 7e-36
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 153 2e-35
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 149 2e-34
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 149 3e-34
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 146 1e-33
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 145 2e-33
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 144 4e-33
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 142 3e-32
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 140 7e-32
UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: ... 136 1e-30
UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase ... 135 2e-30
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 135 2e-30
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 135 3e-30
UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n... 134 8e-30
UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secreto... 134 8e-30
UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; H... 133 1e-29
UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B... 133 1e-29
UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M... 132 3e-29
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 132 3e-29
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 131 4e-29
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 129 2e-28
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 128 3e-28
UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8; A... 128 3e-28
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 128 3e-28
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 126 1e-27
UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;... 126 1e-27
UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd... 126 2e-27
UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5; Ar... 126 2e-27
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 126 2e-27
UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1; O... 125 3e-27
UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase, flag... 124 5e-27
UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase; ... 123 1e-26
UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (E... 121 6e-26
UniRef50_Q8VNS1 Cluster: EscN protein; n=11; Enterobacteriaceae|... 119 2e-25
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 119 2e-25
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 117 7e-25
UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; B... 117 7e-25
UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ... 117 9e-25
UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xen... 116 2e-24
UniRef50_Q37798 Cluster: CF1ATPase alpha-subunit; n=1; Allium am... 115 3e-24
UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A... 115 3e-24
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 115 3e-24
UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; ... 113 9e-24
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 113 9e-24
UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep... 113 2e-23
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 111 6e-23
UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney... 111 6e-23
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 111 6e-23
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 111 6e-23
UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:... 109 2e-22
UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; S... 109 2e-22
UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25; ... 108 4e-22
UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n... 106 1e-21
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 106 1e-21
UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n... 105 2e-21
UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n... 105 3e-21
UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putati... 104 5e-21
UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16; Alphapr... 104 5e-21
UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1; R... 103 1e-20
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 102 2e-20
UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26; ... 101 4e-20
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 101 7e-20
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 99 3e-19
UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion sp... 98 5e-19
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 98 6e-19
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 97 1e-18
UniRef50_Q74MS5 Cluster: NEQ263; n=1; Nanoarchaeum equitans|Rep:... 94 8e-18
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 91 5e-17
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 91 5e-17
UniRef50_O45827 Cluster: Putative uncharacterized protein; n=1; ... 91 9e-17
UniRef50_A6GN32 Cluster: Type III secretion protein; n=1; Limnob... 89 3e-16
UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia cen... 87 9e-16
UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5; Bacteria... 85 6e-15
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 84 8e-15
UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase, alph... 82 4e-14
UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9; Bac... 81 6e-14
UniRef50_Q74MJ7 Cluster: V-type ATP synthase alpha chain; n=1; N... 81 1e-13
UniRef50_Q9HNE3 Cluster: V-type ATP synthase alpha chain; n=21; ... 75 4e-12
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 75 4e-12
UniRef50_A7B5P4 Cluster: Putative uncharacterized protein; n=2; ... 75 7e-12
UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10; ... 75 7e-12
UniRef50_A5ZRD0 Cluster: Putative uncharacterized protein; n=2; ... 73 2e-11
UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa... 73 3e-11
UniRef50_A6AXF1 Cluster: VcsN2; n=7; Vibrio|Rep: VcsN2 - Vibrio ... 71 8e-11
UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.... 71 8e-11
UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19; B... 70 1e-10
UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;... 70 2e-10
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 69 4e-10
UniRef50_Q5JIR3 Cluster: V-type ATP synthase alpha chain; n=12; ... 69 4e-10
UniRef50_Q8A875 Cluster: V-type ATP synthase subunit A; n=9; Bac... 68 7e-10
UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11; ... 67 1e-09
UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/... 66 2e-09
UniRef50_Q3J9F3 Cluster: Sodium-transporting two-sector ATPase; ... 66 2e-09
UniRef50_Q9RWG8 Cluster: V-type ATP synthase alpha chain; n=61; ... 65 5e-09
UniRef50_Q822J8 Cluster: V-type ATP synthase alpha chain; n=15; ... 64 9e-09
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 62 3e-08
UniRef50_Q6L1S7 Cluster: A1AO H+ ATPase subunit A; n=1; Picrophi... 62 3e-08
UniRef50_Q97CQ0 Cluster: V-type ATP synthase alpha chain (EC 3.6... 62 4e-08
UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to ENSANGP000... 61 6e-08
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 61 9e-08
UniRef50_Q6BRM0 Cluster: Debaryomyces hansenii chromosome D of s... 61 9e-08
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 60 2e-07
UniRef50_A3LP04 Cluster: Vacuolar H+-ATPase V1 sector, subunit A... 60 2e-07
UniRef50_O57728 Cluster: V-type ATP synthase alpha chain (EC 3.6... 60 2e-07
UniRef50_Q9UXU7 Cluster: V-type ATP synthase alpha chain (EC 3.6... 60 2e-07
UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit... 60 2e-07
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 59 3e-07
UniRef50_A5DXZ0 Cluster: Vacuolar ATP synthase catalytic subunit... 59 3e-07
UniRef50_P17255 Cluster: Vacuolar ATP synthase catalytic subunit... 58 5e-07
UniRef50_Q874G5 Cluster: Vacuolar membrane ATPase subunit a; n=7... 58 8e-07
UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le... 57 1e-06
UniRef50_A7BUC4 Cluster: V-type ATPase subunit A; n=1; Beggiatoa... 57 1e-06
UniRef50_Q4S553 Cluster: Chromosome 6 SCAF14737, whole genome sh... 55 6e-06
UniRef50_UPI0000382621 Cluster: COG0056: F0F1-type ATP synthase,... 54 1e-05
UniRef50_Q7QUD4 Cluster: GLP_59_34747_32780; n=2; Giardia intest... 53 2e-05
UniRef50_A6QSP8 Cluster: Vacuolar ATP synthase catalytic subunit... 53 2e-05
UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt... 53 2e-05
UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secreto... 52 5e-05
UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA... 51 9e-05
UniRef50_A6BBJ5 Cluster: Probable ATP synthase YscN; n=1; Vibrio... 51 9e-05
UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of s... 47 0.001
UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n... 46 0.002
UniRef50_A0D9M8 Cluster: Chromosome undetermined scaffold_42, wh... 46 0.003
UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n... 45 0.006
UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu... 44 0.008
UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; ... 44 0.014
UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.014
UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n... 42 0.032
UniRef50_Q8XIB4 Cluster: Transcription terminator Rho factor; n=... 42 0.043
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n... 42 0.043
UniRef50_Q24FC1 Cluster: ATP synthase alpha subunit, nucleotide-... 42 0.043
UniRef50_P45835 Cluster: Transcription termination factor rho; n... 42 0.043
UniRef50_P52157 Cluster: Transcription termination factor rho; n... 40 0.17
UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n... 40 0.23
UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w... 39 0.30
UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1; ... 39 0.40
UniRef50_A1U7T6 Cluster: Putative uncharacterized protein precur... 38 0.52
UniRef50_A0E2E9 Cluster: Chromosome undetermined scaffold_75, wh... 38 0.52
UniRef50_Q8G5D1 Cluster: Excinuclease ABC subunit A-like protein... 38 0.69
UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar p... 38 0.92
UniRef50_Q9FC33 Cluster: Putative transcription terminator facto... 38 0.92
UniRef50_O67031 Cluster: Transcription termination factor rho; n... 38 0.92
UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides 2.4.... 37 1.2
UniRef50_Q70AH6 Cluster: ATP-dependent Clp protease proteolytic ... 37 1.2
UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter... 37 1.2
UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populu... 37 1.2
UniRef50_O83281 Cluster: Transcription termination factor rho; n... 37 1.6
UniRef50_A7A9Z6 Cluster: Putative uncharacterized protein; n=1; ... 36 2.1
UniRef50_A7PG24 Cluster: Chromosome chr6 scaffold_15, whole geno... 36 2.1
UniRef50_Q4WFI3 Cluster: Short-chain dehydrogenase/reductase fam... 36 2.1
UniRef50_P21212 Cluster: Uncharacterized protein in lcrE 5'regio... 36 2.1
UniRef50_UPI0000E4A607 Cluster: PREDICTED: similar to Hamartin, ... 36 2.8
UniRef50_UPI0000E47BE5 Cluster: PREDICTED: hypothetical protein,... 36 2.8
UniRef50_Q4TFT9 Cluster: Chromosome undetermined SCAF4210, whole... 36 2.8
UniRef50_A5V9Z8 Cluster: Putative uncharacterized protein precur... 36 2.8
UniRef50_Q02ZT7 Cluster: Lipopolysaccharide biosynthesis glycosy... 36 3.7
UniRef50_A1VI76 Cluster: Vault protein inter-alpha-trypsin domai... 36 3.7
UniRef50_Q00Y22 Cluster: [S] KOG4674 Uncharacterized conserved c... 36 3.7
UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n... 35 4.9
UniRef50_Q2Y0E8 Cluster: VP3; n=1; Aedes pseudoscutellaris reovi... 35 6.5
UniRef50_A5F9L0 Cluster: Phage related protein; n=9; Bacteria|Re... 35 6.5
UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2; ... 35 6.5
UniRef50_Q1YH29 Cluster: Putative uncharacterized protein; n=1; ... 34 8.5
UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase alpha/... 34 8.5
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 970 bits (2402), Expect = 0.0
Identities = 479/550 (87%), Positives = 509/550 (92%), Gaps = 1/550 (0%)
Query: 1 MSLISARIAGSVARRLPNAATQVS-KXXXXXXXXXSRKLHVSTTHKAAEISTILEERILG 59
MS+ SAR+A SVAR LP AA QV+ K +RKLHV++T ++AEIS ILEERILG
Sbjct: 1 MSIFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILG 60
Query: 60 AAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGN 119
APKADLEETGRVLSIGDGIARVYGL NIQA+EMVEFSSGLKGMALNLEPDNVGVVVFGN
Sbjct: 61 VAPKADLEETGRVLSIGDGIARVYGLNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGN 120
Query: 120 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 179
DKLIK+GDIVKRTGAIVDVPVG+++LGRVVDALGN IDGKG I+TK R RVGIKAPGIIP
Sbjct: 121 DKLIKQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKDRFRVGIKAPGIIP 180
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ+RFN+ +DE KK
Sbjct: 181 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESKK 240
Query: 240 LYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR 299
LYCIYVAIGQKRSTVAQIVKRLTD+GA+ Y++IVSATASDAAPLQYLAPYSGCAMGE+FR
Sbjct: 241 LYCIYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFR 300
Query: 300 DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGG 359
D GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMS MGG
Sbjct: 301 DKGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGG 360
Query: 360 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA 419
GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA
Sbjct: 361 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA 420
Query: 420 QTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAI 479
QTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAI
Sbjct: 421 QTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAI 480
Query: 480 EEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLK 539
E+QVA+IYCGVRGHLDK+DP+KIT FEKEF QHIKTS Q LL TIAKDG I+ SDA LK
Sbjct: 481 EDQVAVIYCGVRGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLK 540
Query: 540 KIVTDFLATF 549
IV F++TF
Sbjct: 541 DIVAKFMSTF 550
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 924 bits (2286), Expect = 0.0
Identities = 454/551 (82%), Positives = 495/551 (89%), Gaps = 4/551 (0%)
Query: 3 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 58
++S R+A +V R LP A VS+ +R H S TH AE+S+ILEERIL
Sbjct: 1 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60
Query: 59 GAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFG 118
GA DLEETGRVLSIGDGIARV+GL+N+QAEEMVEFSSGLKGM+LNLEPDNVGVVVFG
Sbjct: 61 GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG 120
Query: 119 NDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGII 178
NDKLIKEGDIVKRTGAIVDVPVGE++LGRVVDALGN IDGKGPI +K+R RVG+KAPGII
Sbjct: 121 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII 180
Query: 179 PRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKK 238
PR+SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQ+RFN G DEKK
Sbjct: 181 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK 240
Query: 239 KLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
KLYCIYVAIGQKRSTVAQ+VKRLTDA A+ YTI+VSATASDAAPLQYLAPYSGC+MGE+F
Sbjct: 241 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 300
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMG 358
RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM+D G
Sbjct: 301 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG 360
Query: 359 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 418
GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
Sbjct: 361 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 420
Query: 419 AQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMA 478
AQT+AMKQVAG+MKLELAQYREVAAFAQFGSDLDAATQQLL+RG+RLTELLKQGQY PMA
Sbjct: 421 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA 480
Query: 479 IEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASL 538
IEEQVA+IY GVRG+LDKL+PSKIT FE F H+ + HQ LL TI DG+I+ +SDA L
Sbjct: 481 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL 540
Query: 539 KKIVTDFLATF 549
K+IVT+FLA F
Sbjct: 541 KEIVTNFLAGF 551
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 699 bits (1728), Expect = 0.0
Identities = 341/507 (67%), Positives = 409/507 (80%), Gaps = 1/507 (0%)
Query: 45 KAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFS-SGLKGM 103
+ AEIS IL+++I + ETG VLSIGDGIARVYGL N+ A EMVEF +GLKGM
Sbjct: 4 RPAEISDILKQQIASFDQVETVSETGTVLSIGDGIARVYGLTNVMAGEMVEFEGTGLKGM 63
Query: 104 ALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPID 163
ALNLE DNVGVV+FG+ I+EGD V RT ++V+VPVG+ +LGRVVD LGNPIDG+GP+
Sbjct: 64 ALNLEADNVGVVLFGDGDSIREGDTVLRTKSVVEVPVGKGLLGRVVDGLGNPIDGRGPLT 123
Query: 164 TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 223
R +KAPGI+PR SV EPMQTGIKA+D+LVPIGRGQRELIIGDRQTGKTA+ IDT
Sbjct: 124 DVEYRRAEVKAPGIMPRQSVSEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDT 183
Query: 224 IINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 283
I+ Q+ N D KK LYCIYVA+GQKRSTVA +V+ L + GA+ Y+I+V+ATASDAAP+
Sbjct: 184 IVAQKPVNAEGDPKKSLYCIYVAVGQKRSTVANLVRTLIEHGAMEYSIVVAATASDAAPM 243
Query: 284 QYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 343
QYLAPY+ CAMGE+FRDNG HAL+ YDDLSKQAVAYRQMSLLLRRPP REA+PGDVFYLH
Sbjct: 244 QYLAPYTACAMGEYFRDNGMHALVCYDDLSKQAVAYRQMSLLLRRPPAREAFPGDVFYLH 303
Query: 344 SRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIR 403
SRLLERAAKMSD GGGSLTALPVIETQAGD +AYIPTNVISITDGQIFLET+LFY+GIR
Sbjct: 304 SRLLERAAKMSDANGGGSLTALPVIETQAGDTAAYIPTNVISITDGQIFLETDLFYRGIR 363
Query: 404 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGM 463
PA+NVG SVSRVGSAAQ KAMKQVAG +KLELAQYRE+AAF+QF SDLDAAT++ L+RG
Sbjct: 364 PAVNVGGSVSRVGSAAQIKAMKQVAGKIKLELAQYREMAAFSQFASDLDAATRKQLDRGA 423
Query: 464 RLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLST 523
RL ELLKQ + P+ +EEQV ++Y G RG++D + K+ A+E ++ + +L+
Sbjct: 424 RLVELLKQPETSPLPVEEQVVVLYAGTRGYVDPIAVDKVVAYEAALLSELRGAGSDILTA 483
Query: 524 IAKDGQITPESDASLKKIVTDFLATFT 550
I D QI PE++ LK+++ F F+
Sbjct: 484 IRNDRQIKPETEGKLKELLEAFGKRFS 510
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 589 bits (1455), Expect = e-167
Identities = 277/507 (54%), Positives = 379/507 (74%)
Query: 43 THKAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKG 102
T A +I +EE + EE G V+ +GD IA V GL ++ +E++EF G+ G
Sbjct: 5 TISADDIQNAIEEYVSSFTADTFREEVGTVVDVGDSIAHVEGLPSVMTQELLEFPGGILG 64
Query: 103 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 162
+ALNL+ NVG V+ G+ + IKEG VKRTG ++ VPVGE +GRVV+ LG PIDG+G I
Sbjct: 65 VALNLDEHNVGAVILGDFENIKEGQKVKRTGDVLSVPVGEAFMGRVVNPLGQPIDGRGDI 124
Query: 163 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 222
+ ++R + ++AP ++ R SV+EP+QTGIKA+D++ PIGRGQR+L+IGDR+TGKTA+ +D
Sbjct: 125 EAEARRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCVD 184
Query: 223 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAP 282
TI+NQ++ + D K+++ C+YVAIGQK +T+A + + L + GA++YT IV+A ASD+A
Sbjct: 185 TILNQRQNWESGDPKRQVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAALASDSAG 244
Query: 283 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 342
++LAPY+G A+ + + +GKH LI++DDL+KQA AYR +SLLLRRPPGREAYPGDVFYL
Sbjct: 245 FKWLAPYTGSAIAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYL 304
Query: 343 HSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGI 402
HSRLLER AK++D +GGGSLT LP+IET+A D+SAYIPTNVISITDGQ FLET+LF +G+
Sbjct: 305 HSRLLERCAKLADHLGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQGV 364
Query: 403 RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRG 462
RPAINVG+SVSRVG AAQ KAMK+VAGS++L+L+QYRE+ AFA F SDLDA ++ L RG
Sbjct: 365 RPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELEAFAAFASDLDATSKAQLERG 424
Query: 463 MRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLS 522
RL ELLKQ QY PM +EEQV ++ G GHLD + + FE E HI+ + + +L+
Sbjct: 425 ARLVELLKQPQYQPMPVEEQVISLFLGTGGHLDSVPVGDVRRFETELLDHIRVAQEEILT 484
Query: 523 TIAKDGQITPESDASLKKIVTDFLATF 549
I + ++T E+ SL +++ F F
Sbjct: 485 EIRESQKLTDEAADSLTEVIKSFKKGF 511
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 557 bits (1376), Expect = e-157
Identities = 271/510 (53%), Positives = 364/510 (71%)
Query: 43 THKAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKG 102
T + EI + +E +P+A EE G V DGIA V GL + A E++EF G+ G
Sbjct: 5 TISSDEIRSAIENYTASYSPEASREEVGLVTDTSDGIAHVSGLPSAMANELLEFPGGILG 64
Query: 103 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 162
+ALNL+ +G V+ G+ + I+EG VKRTG ++ VPVG+ LGRV++ LG PIDG G I
Sbjct: 65 VALNLDATEIGAVILGDYENIQEGQEVKRTGDVLSVPVGDAFLGRVINPLGQPIDGLGEI 124
Query: 163 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 222
++ + ++A ++ R V EP+QTGIKA+D++ PIGRGQR+L+IGDR+TGKTA+ ID
Sbjct: 125 ESNETRALELQAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCID 184
Query: 223 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAP 282
I+NQ+ + DEK+++ CIYVAIGQK ST+A + L + GA+ YT IV+A ASD+A
Sbjct: 185 AILNQKANWETGDEKQQVRCIYVAIGQKGSTIAGVKAALEEQGAMEYTTIVAAPASDSAG 244
Query: 283 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 342
++LAPY+G A+G+ + GKH L+++DDL+KQA AYR +SLLLRRPPGREAYPGDVFYL
Sbjct: 245 FKWLAPYTGSAIGQHWMYQGKHVLVVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYL 304
Query: 343 HSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGI 402
HSRLLER+AK+SD +GGGSLTALP+IET+A DVSAYIPTNVISITDGQ+FLE++LF KG+
Sbjct: 305 HSRLLERSAKLSDALGGGSLTALPIIETKANDVSAYIPTNVISITDGQVFLESDLFNKGV 364
Query: 403 RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRG 462
RPAINVG+SVSRVG AAQTK MK+V+GS++LELAQ+RE+ AF+ F SDLDAA++ L RG
Sbjct: 365 RPAINVGISVSRVGGAAQTKGMKKVSGSLRLELAQFRELEAFSAFASDLDAASKAQLERG 424
Query: 463 MRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLS 522
RL ELLKQ QY P+ +E+Q+ IY G D + + FE E + + G+
Sbjct: 425 ARLVELLKQDQYSPIPVEDQIVSIYLAGEGVFDSVPVGDVRRFEAELLDELHRTASGVYE 484
Query: 523 TIAKDGQITPESDASLKKIVTDFLATFTQS 552
+I + ++ +L + F TF S
Sbjct: 485 SIKGGKALDADNAKALVEATDKFKETFIAS 514
>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
Length = 1259
Score = 556 bits (1372), Expect = e-157
Identities = 269/344 (78%), Positives = 307/344 (89%), Gaps = 1/344 (0%)
Query: 47 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 106
AE+ST+LE+RI K ++E GRV+S+GDGIARVYGL IQA EMVEF+SG+KGMALN
Sbjct: 7 AELSTLLEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNKIQAGEMVEFASGVKGMALN 66
Query: 107 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 166
LE +NVG+V+FG+D IKEGDIVKRTG+IVDVPVG+ +LGRVVDALG PIDGKG +
Sbjct: 67 LENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGMLGRVVDALGVPIDGKGALSAVE 126
Query: 167 RMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 226
R RV +KAPGII R SV EPMQTG+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+N
Sbjct: 127 RRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 186
Query: 227 QQRFN-KGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQY 285
Q++ N +G + +KLYC+YVAIGQKRSTVAQ+VK L++AGA+ Y+IIV+ATASD APLQ+
Sbjct: 187 QKQINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVAATASDPAPLQF 246
Query: 286 LAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 345
LAPYSGCAMGE+FRDNG HALIIYDDLSKQ+VAYRQMSLLLRRPPGREA+PGDVFYLHSR
Sbjct: 247 LAPYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSR 306
Query: 346 LLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDG 389
LLERAAKMSD+ G GSLTALPVIETQAGDVSAYIPTNVISITDG
Sbjct: 307 LLERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDG 350
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 556 bits (1372), Expect = e-157
Identities = 277/494 (56%), Positives = 362/494 (73%), Gaps = 3/494 (0%)
Query: 43 THKAAEISTILEERILGAAPKADL-EETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLK 101
T + EI L+ + P+ + EE G V++ GDGIA V GL + A E++ F +G
Sbjct: 5 TIRPEEIRDALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGLPSAMANELLRFENGTM 64
Query: 102 GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 161
G+ALNLE +GVVV G+ I EG V+ TG ++ VPVGE LGRVVDA+GNP+DG G
Sbjct: 65 GIALNLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGE 124
Query: 162 ID-TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 220
I + R + I+A G++ R VREP+QTG+KA+DS++PIGRGQR+LIIGDR+TGKTA+A
Sbjct: 125 IKGVEGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIA 184
Query: 221 IDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDA 280
IDTIINQ+ + D +K++ CIYVAIGQK STVA++ L AGA+ YT IV A ASD
Sbjct: 185 IDTIINQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDP 244
Query: 281 APLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 340
A +Y+APY+G A+G+ + GKH LII+DDL+KQA AYR MSLLLRRPPGREAYPGDVF
Sbjct: 245 AGFKYIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVF 304
Query: 341 YLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 400
YLHSRLLER AK+SD +GGGS+T LP+IET+A DVSA+IPTNVISITDGQIFL+++LF
Sbjct: 305 YLHSRLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNA 364
Query: 401 GIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLN 460
RPA++VG+SVSRVG AAQ KAMK VAG++K+ LAQYR++ AFA F SDLD +++ L+
Sbjct: 365 NQRPAVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQYRDMQAFAMFASDLDDTSRRQLD 424
Query: 461 RGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGL 520
RG RL ELLKQGQ+ P +EEQV ++ G G D + + FE + ++++ SH +
Sbjct: 425 RGARLMELLKQGQFSPYPVEEQVISVWGGTTGKFDDVPVGDVLRFEGDVLEYLR-SHSNV 483
Query: 521 LSTIAKDGQITPES 534
L+TI + G+ E+
Sbjct: 484 LTTIRETGKFDDEA 497
>UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2;
Cryptosporidium|Rep: ATP synthase subunit alpha -
Cryptosporidium parvum Iowa II
Length = 639
Score = 513 bits (1265), Expect = e-144
Identities = 253/491 (51%), Positives = 355/491 (72%), Gaps = 11/491 (2%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 129
G+V+S+ DGIA+V G+++++ E+VEFSSG KGMALNLE D+VG+V+ G D+ I++GD V
Sbjct: 151 GQVISVADGIAQVDGIRSVKYGELVEFSSGEKGMALNLENDHVGIVILGEDRNIRKGDQV 210
Query: 130 KRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQT 189
T IV+ PVG+++LGRVVDALGNPIDGK I + + + +KAPGI+ R + E + T
Sbjct: 211 ISTNTIVNCPVGKELLGRVVDALGNPIDGKPSIISLEKREIDVKAPGIMDRKPINEQLIT 270
Query: 190 GIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQ 249
GIK +DSL+PIG GQRE I+GDRQTGKT+L +D I+NQ++F +D K + YCIYVAIGQ
Sbjct: 271 GIKFIDSLIPIGLGQREAIVGDRQTGKTSLVLDIILNQRKFY--DDIKTRKYCIYVAIGQ 328
Query: 250 KRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIY 309
KRS+VAQIVK L A+ YTI+++ATAS+AA LQ+LAP++GC MGE+FRDNG+H +I+Y
Sbjct: 329 KRSSVAQIVKILEKYDALKYTIVIAATASNAASLQFLAPFTGCTMGEWFRDNGQHCIIVY 388
Query: 310 DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIE 369
DDLSKQA AYRQ+SLLLRRPPGRE+YPGD+FY+HSRLLER++K+SD+ GGGSLTALP++E
Sbjct: 389 DDLSKQANAYRQISLLLRRPPGRESYPGDIFYIHSRLLERSSKLSDEKGGGSLTALPIVE 448
Query: 370 TQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAG 429
TQ+ S++IPTN+ SITDGQI L+++LF+KG RPA N+GLS+SR+GS+ Q K++K+V+
Sbjct: 449 TQSNKFSSFIPTNITSITDGQIVLDSDLFFKGNRPAFNLGLSISRIGSSTQNKSIKKVSQ 508
Query: 430 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCG 489
++KL+L QY+E F+ S+ + + ++ L EL +Q Q+ E +IY
Sbjct: 509 NIKLDLLQYKEFKQFSDSNSNQNPNNLMINDKYKLLEELFQQNQFQFFEPEFLTCLIYTI 568
Query: 490 VRGHLDK-------LDPSKITAFEKEFTQHI--KTSHQGLLSTIAKDGQITPESDASLKK 540
+ + L+ FEK F + + K ++ LL+TI + + L K
Sbjct: 569 NNNNNNNNNNNNGILNIKDFKLFEKSFHEFLYSKQEYKDLLNTIKVSLEFNDLMKSKLNK 628
Query: 541 IVTDFLATFTQ 551
+ +F F +
Sbjct: 629 AINEFSYIFNK 639
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 502 bits (1238), Expect = e-140
Identities = 284/542 (52%), Positives = 362/542 (66%), Gaps = 68/542 (12%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEF-----------SSG-----LKGMALNLEPDNVG 113
G V + DG+A V L N++ E+V F S G ++GM + +E D +
Sbjct: 50 GEVEKVKDGVAFVTRLGNVRFSELVSFIPAPSRLKSLRSKGNSNLIVEGMVVGIEQDYIS 109
Query: 114 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID--------GKGPIDTK 165
V++FG+++ +K GD V+ G IV + VG +LGRV+D LGN +D K P D
Sbjct: 110 VIIFGDERFVKVGDRVRPRGNIVAINVGIGLLGRVIDPLGNVLDDPTRPVELNKSPKDDL 169
Query: 166 SR------------MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQ 213
R V I+APGII R SV +P+ TG+ VDS+VPIG GQRELIIGDRQ
Sbjct: 170 FRNYYIGRIVTGYSRPVEIQAPGIIVRKSVNKPLLTGLNCVDSMVPIGLGQRELIIGDRQ 229
Query: 214 TGKTALAIDTIINQQRFNK----------GEDEKKKL-----YCIYVAIGQKRSTVAQIV 258
GKTA+AID I+NQ N+ G K L YCIYV IGQK+ST+A+I
Sbjct: 230 VGKTAVAIDMILNQAFLNETLRNSLLSSEGAVVNKLLPSKPCYCIYVGIGQKQSTIARIA 289
Query: 259 K----------------RLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 302
K R + A+NYTIIV++ +SD+AP+Q+LAPY+GC +GE FRD+G
Sbjct: 290 KLLKRPRTLFERNVSTKRSSVFSALNYTIIVASISSDSAPIQFLAPYTGCTVGELFRDSG 349
Query: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSL 362
+A+I+YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAA+MSD +GGGSL
Sbjct: 350 SNAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAQMSDAVGGGSL 409
Query: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422
TALP+IET A DVSAYIPTNVISITDGQIFLETELF +GIRPAINVGLSVSRVGSAAQ K
Sbjct: 410 TALPIIETMANDVSAYIPTNVISITDGQIFLETELFNQGIRPAINVGLSVSRVGSAAQFK 469
Query: 423 AMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQ 482
MKQ+AG++KLELAQYREV FA+FG+ LDA T++ LNRG RL ELLKQGQYVP+ + Q
Sbjct: 470 PMKQIAGTLKLELAQYREVMEFAKFGASLDAETKRQLNRGARLVELLKQGQYVPLEVSVQ 529
Query: 483 VAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIV 542
+ ++ G+ G LD + + +++ +++G++ T + Q + D + KK+V
Sbjct: 530 IVFVFLGISGLLDGRKLENLGQLKSILRSYLRQNYKGMV-TSSNYLQTANQIDLNFKKLV 588
Query: 543 TD 544
+
Sbjct: 589 VN 590
>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
cellular organisms|Rep: ATP synthase subunit alpha -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 799
Score = 501 bits (1236), Expect = e-140
Identities = 260/507 (51%), Positives = 346/507 (68%), Gaps = 10/507 (1%)
Query: 42 TTHKAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLK 101
T +K + + ++ +I + KA E G V+S+GDGI V GL N+ E+V F +G++
Sbjct: 2 TDNKNHSLISDIKSQIKKFSEKALTLEVGNVISLGDGIVLVDGLDNVMLNEIVRFENGVE 61
Query: 102 GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGP 161
GMALNLE D VGVV+ G+ IKEGD V RT IV+VPVG+ +LGRVVDALG +D KG
Sbjct: 62 GMALNLEEDAVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVMLGRVVDALGKAVDNKGN 121
Query: 162 IDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAI 221
I + APG++ R SV +P++TGI ++D++ PIG+GQRELIIGDRQTGKT +AI
Sbjct: 122 IVANKFSVIEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTIAI 181
Query: 222 DTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAA 281
D IINQ KG + + C+YVAIGQK ST+A +V+ L GA+ YT +V+A AS+
Sbjct: 182 DAIINQ----KG----RNVNCVYVAIGQKNSTIANVVRELEAHGAMEYTTVVTANASELP 233
Query: 282 PLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 341
LQY+AP++G + E + GK LI+YDDLSK A+AYR +SLLLRRPPGREAYPGDVFY
Sbjct: 234 ALQYIAPFTGVTIAEEWMHQGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFY 293
Query: 342 LHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG 401
LHSRLLERA K+ D++G GS+TALP+IETQAGD+SAYIPTNVISITDGQIF+ T LF G
Sbjct: 294 LHSRLLERACKLKDELGAGSITALPIIETQAGDISAYIPTNVISITDGQIFMMTSLFNAG 353
Query: 402 IRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNR 461
RPAI+ G SVSRVGSAAQ K++KQ S+KLELA YRE+ AF+QFGSDLD T+++L
Sbjct: 354 QRPAIDAGQSVSRVGSAAQIKSVKQTGASLKLELANYRELEAFSQFGSDLDDETKRILKL 413
Query: 462 GMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTS--HQG 519
G + ++KQ P ++ I++ + ++ +I F++ + K +
Sbjct: 414 GKAVMAVIKQAPNKPYNQTDEAIILFTVKEKLIPQVPVERIQDFKEYLLNYFKGTKLRAD 473
Query: 520 LLSTIAKDGQITPESDASLKKIVTDFL 546
L A D + TP +++K + FL
Sbjct: 474 LEDKKAFDKENTPAFRCAIQKAINSFL 500
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 456 bits (1125), Expect = e-127
Identities = 220/277 (79%), Positives = 249/277 (89%), Gaps = 2/277 (0%)
Query: 65 DLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK 124
D++E G V+SIGDGIARV+GL +QA EMVEFSSG++GMALNLE DNVG+VV GND+ I+
Sbjct: 47 DIKEYGTVISIGDGIARVFGLTQVQAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQ 106
Query: 125 EGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVR 184
EGDIVKRTGAIVDVP+G ++LGRV DALGNPIDG GP+ T +R RV +KAPGIIPR SV
Sbjct: 107 EGDIVKRTGAIVDVPIGMEMLGRVFDALGNPIDGHGPVKTNTRRRVELKAPGIIPRKSVH 166
Query: 185 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ-RFNKGEDEKKKLYCI 243
EPMQTG+KAVD LVPIGRGQRELIIGDRQTGKTA+AIDTIINQ+ F+ G D+ K+LYCI
Sbjct: 167 EPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKPNFDSG-DKNKQLYCI 225
Query: 244 YVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGK 303
YVAIGQKRSTVA +VK LT AGA+ YTI+V+ATAS+AAPLQYLAPYSGCA+GE+FRDNG
Sbjct: 226 YVAIGQKRSTVANLVKILTQAGAMKYTIVVAATASEAAPLQYLAPYSGCAIGEYFRDNGM 285
Query: 304 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 340
HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF
Sbjct: 286 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 322
Score = 114 bits (275), Expect = 5e-24
Identities = 53/97 (54%), Positives = 71/97 (73%)
Query: 450 DLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEF 509
+LDAATQQLLNRG +LTELLKQ QYVPM EEQV +IY GVRG LDK+ S+I FE++F
Sbjct: 507 NLDAATQQLLNRGAQLTELLKQKQYVPMCAEEQVCVIYAGVRGFLDKVQTSEIAKFEEKF 566
Query: 510 TQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFL 546
H++T++ +L I G+++ + DA LK I+ F+
Sbjct: 567 LTHLRTNYPAMLERIRSTGELSKQDDAELKSILEVFI 603
>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
Marinobacter sp. ELB17
Length = 549
Score = 444 bits (1095), Expect = e-123
Identities = 219/472 (46%), Positives = 324/472 (68%), Gaps = 8/472 (1%)
Query: 62 PKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK 121
P L E GRV+ +GDG+A V GL A+E++ F+SG++G+ L+LEP +GV++ G +
Sbjct: 57 PAPVLTEVGRVIEVGDGVAVVTGLARALADELLIFASGVRGIVLDLEPGRLGVILLGPSE 116
Query: 122 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRV 181
I+ G+ V+RT ++ VPVG +LGRVVDA+G P DG G I + V +APG++ R
Sbjct: 117 HIRLGEDVRRTRKVISVPVGPALLGRVVDAVGLPRDGLGVIAAVAEHPVEAEAPGVLSRS 176
Query: 182 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 241
++ +P+ TGIKA+D+ VP+G GQRELIIGDRQTGKT++A+DT++NQ R + +
Sbjct: 177 AIFKPLATGIKAIDAAVPVGLGQRELIIGDRQTGKTSIAVDTMLNQIRSD--------VI 228
Query: 242 CIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDN 301
CIY AIGQ+ V++++ L + +I++SA + L Y+APY+ M E+F D
Sbjct: 229 CIYCAIGQRGDAVSRVIGALKKGDMMARSIVMSAGDEETPGLAYIAPYAAMTMAEYFCDQ 288
Query: 302 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 361
G+ LII+DDL+ A +YR++SLLLRRPPGREA+PGD+FY+H+RLLERA + ++++GGGS
Sbjct: 289 GRDVLIIFDDLTHHARSYRELSLLLRRPPGREAFPGDIFYVHARLLERAGQFTEEVGGGS 348
Query: 362 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 421
+TALPV+ETQA ++SAYIPTN+ISITDGQI+L +L K PA++ GLSVSRVGS AQ+
Sbjct: 349 ITALPVVETQAENLSAYIPTNLISITDGQIYLSPQLVQKNQFPAVHQGLSVSRVGSKAQS 408
Query: 422 KAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEE 481
+A+++VAG++++ L+Q+ E+ FA+FG+ LD AT+ L RG + L+Q + PM E
Sbjct: 409 RALRKVAGNLRVTLSQFEELEDFARFGTRLDDATRARLKRGAAVRNSLRQAERDPMPAVE 468
Query: 482 QVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPE 533
Q+A++ + G LD L+ + + K Q + IA D ++ PE
Sbjct: 469 QLAVLIAAMEGLLDGLEEQPLVDAMQRIRVLAKKQLQEIEQRIADDKELRPE 520
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 444 bits (1093), Expect = e-123
Identities = 215/447 (48%), Positives = 306/447 (68%), Gaps = 8/447 (1%)
Query: 61 APKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGND 120
AP E G + SI GIA+V GL + +E+V+F L G+A N++ +GVV+ G
Sbjct: 26 APSLAPREVGTITSIATGIAKVSGLPGVGFDELVKFPGDLFGIAFNVDEAEIGVVLLGEY 85
Query: 121 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPR 180
+ GD V RTG ++DV VG+ +LGRV+D LG P+DG+GP+ + R+ + A I+ R
Sbjct: 86 WHLHAGDEVDRTGRVMDVAVGDGLLGRVIDPLGRPLDGRGPVASSHRLPIERPASPIMDR 145
Query: 181 VSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKL 240
V P+QTG+K +D+L+P+GRGQRELI+GDRQTGKTA+AIDTI+NQQ N +
Sbjct: 146 APVTVPLQTGLKVIDALIPVGRGQRELILGDRQTGKTAIAIDTILNQQGQN--------V 197
Query: 241 YCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRD 300
C+Y AIGQ+ S VA++V L + GA+++T +V +D L Y+APY+ ++ E F +
Sbjct: 198 LCVYCAIGQRASAVAKVVATLREKGAMDFTTVVVTEGNDPPGLAYIAPYAATSIAEHFME 257
Query: 301 NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGG 360
G+ LI+YDDL++ A AYR++SLLLRRPPGREA+PGD+FY+HSRLLERA + + GGG
Sbjct: 258 AGRDVLIVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERATHLRQERGGG 317
Query: 361 SLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQ 420
SLTALP+IETQA ++SAYIPTN+ISITDGQI+L LF G+ PA++VG SVSRVG AQ
Sbjct: 318 SLTALPIIETQAQNISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVGKSVSRVGGKAQ 377
Query: 421 TKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIE 480
A + VAG +KL AQ+ E+ FA+FG+ LD T +++ G R+ LKQ + P+++
Sbjct: 378 RTAYRAVAGDLKLAYAQFEELETFARFGARLDENTTKIIEHGRRIRACLKQPESAPVSVA 437
Query: 481 EQVAIIYCGVRGHLDKLDPSKITAFEK 507
Q+A++ D ++ +++T E+
Sbjct: 438 AQIAVLLALSAELFDGVELNQMTEAEQ 464
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 439 bits (1082), Expect = e-122
Identities = 258/526 (49%), Positives = 341/526 (64%), Gaps = 29/526 (5%)
Query: 48 EISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNL 107
EI+ +++ +I K L++ G V ++GDGI+RV GL+ + E++EF +G GMA+NL
Sbjct: 7 EITGLIKSQIKNYRTKLVLDDVGTVCTVGDGISRVNGLEKCMSGELLEFENGTYGMAMNL 66
Query: 108 EPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSR 167
E D VG V+ G ++ I+EG VKRTG IV VPVGE +LGRVV+ALG PIDGKG I T
Sbjct: 67 EQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGEAMLGRVVNALGAPIDGKGAILTNET 126
Query: 168 MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 227
V A GII R SV P+QTGIKA+DS++P+GRGQRELIIGDRQTGKT +A+DTIINQ
Sbjct: 127 RPVESPAFGIITRKSVNRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGKTTIALDTIINQ 186
Query: 228 QRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLA 287
KG K + CIYVAIGQK STVA IV LT A++Y+I+VSATAS+ APLQY+A
Sbjct: 187 ----KG----KNVICIYVAIGQKISTVANIVDTLTKNDAMDYSIVVSATASEMAPLQYIA 238
Query: 288 PY-SGCAMGEFFRDNGKHALII--YDDLS----KQAVAYRQMSLLLRRPPGREAYP---- 336
PY S M E+F + ++ DDLS +QAV +LLL+RP G
Sbjct: 239 PYASVLLMAEYFMYTRANDVLCADTDDLSSTLYRQAVQIAICTLLLKRPTGTCGIMIPAI 298
Query: 337 GDVFYLHSRLLERAAKMSDKM----GGGSLTALPVIET--QAGDV-SAYIPTNVISITDG 389
GDV YLHSRL R + GGGS+TALP Q V AYIPTNVISITDG
Sbjct: 299 GDV-YLHSRLSGRERDYDHRYMKINGGGSITALPSHRNIRQVNKVYKAYIPTNVISITDG 357
Query: 390 -QIFL-ETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQF 447
+ FL + G+RPA+N G+SVSRVG +AQ KAMK+V+G +KL +QYRE+ +F+QF
Sbjct: 358 HRYFLGNRAVLSSGVRPAVNPGISVSRVGGSAQIKAMKKVSGPLKLLYSQYRELQSFSQF 417
Query: 448 GSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEK 507
GSDLD T+ L +G R+ E+LKQ + P+ +E+QV +IY V +L K+ I +EK
Sbjct: 418 GSDLDQDTKDRLAQGERIVEVLKQSKNSPVDVEKQVLLIYAVVNNYLKKIPVEDIREYEK 477
Query: 508 EFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATFTQSQ 553
+ + SH +L++I ++T E++ +LK ++ DF F Q +
Sbjct: 478 DLFLFLDESHPDILASIRDTKELTAENEKALKNVLKDFADKFMQQK 523
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 431 bits (1061), Expect = e-119
Identities = 220/454 (48%), Positives = 311/454 (68%), Gaps = 18/454 (3%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 129
G + I D + V GLKN + EM+ FS +KG+ +L NV +++ N + +G+
Sbjct: 5 GIINKIYDSVVEVLGLKNAKYGEMILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKC 64
Query: 130 KRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQT 189
T I +VPVG+Q++GR++++ G +D I + APG++ R +V EP+ T
Sbjct: 65 YCTNKIFEVPVGKQLIGRIINSRGETLDLLPEIKINEFSPIEKIAPGVMDRETVNEPLLT 124
Query: 190 GIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQ 249
GIK++DS++PIG+GQRELIIGDRQTGKT + IDTIINQ+ K + C+YV IGQ
Sbjct: 125 GIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIINQKN--------KNIICVYVCIGQ 176
Query: 250 KRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIY 309
K S++ I+ +L + YTIIV++TASD+A QY+APY+G + E+FRD G+ LI+Y
Sbjct: 177 KISSLINIINKLKKFNCLEYTIIVASTASDSAAEQYIAPYTGSTISEYFRDKGQDCLIVY 236
Query: 310 DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM--------SDKMGGGS 361
DDL+K A AYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER++K+ S+ + GS
Sbjct: 237 DDLTKHAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERSSKVNKFFVNKKSNILKAGS 296
Query: 362 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 421
LTA P+IET GDV+++IPTNVISITDGQIFL+T LF GIRP+INVGLSVSRVG AAQ
Sbjct: 297 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSGIRPSINVGLSVSRVGGAAQY 356
Query: 422 KAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEE 481
K +K+++G +++ LAQYRE+ AF++F SDLD+ T+ L G ++T L+KQ + I E
Sbjct: 357 KIIKKLSGDIRIMLAQYRELEAFSKFSSDLDSETKNQLIIGEKITILMKQNIHDVYDIFE 416
Query: 482 QVAIIYCGVRGHLDKLDP-SKITAFEKEFTQHIK 514
+ I+ ++ +L P +++ FE + +++
Sbjct: 417 LILILLI-IKHDFFRLIPINQVEYFENKIINYLR 449
>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to ATPA gene
encoding subunit alpha of ATP synthase - Candidatus
Kuenenia stuttgartiensis
Length = 498
Score = 427 bits (1053), Expect = e-118
Identities = 217/475 (45%), Positives = 312/475 (65%), Gaps = 8/475 (1%)
Query: 68 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 127
E G+VLS+GDGI + GL++ + E++ F SG +G++ +L D++ VV+ I+ GD
Sbjct: 27 EEGKVLSVGDGIVHIAGLRDAKLYELILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGD 86
Query: 128 IVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPM 187
+T I V E +LGRV+ ALGNPID + V AP ++ R + EP+
Sbjct: 87 TAYKTDRIASVNATEGLLGRVLGALGNPIDNGPELKECLSCPVERDAPSLLQRDFITEPL 146
Query: 188 QTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAI 247
TGIK +DS++ IG+GQRELIIGD TGK+++AIDT+INQ+ ++ IYV I
Sbjct: 147 YTGIKVIDSMLAIGKGQRELIIGDPSTGKSSIAIDTVINQKN--------SRVISIYVVI 198
Query: 248 GQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALI 307
GQK+S V +I++ + G + TI V A AS++ LQ++APYS A+ E+F GK LI
Sbjct: 199 GQKKSHVLKIIEEIKKYGDFSRTIFVIADASNSLGLQFIAPYSATAIAEYFLYKGKDVLI 258
Query: 308 IYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPV 367
+YDDL+K A AYR +SLLL+RPPGREAYPGD+F++HSRLLER+AK++ K GGGS+TALP+
Sbjct: 259 VYDDLTKHADAYRSLSLLLKRPPGREAYPGDIFFIHSRLLERSAKLNQKNGGGSITALPI 318
Query: 368 IETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQV 427
+ETQ G +S+YIPTN+ISITDGQI+L+T LF KGIRPA++VG SVSR+G AQ +AMK V
Sbjct: 319 VETQQGRISSYIPTNLISITDGQIYLDTLLFNKGIRPAVDVGKSVSRIGGKAQVEAMKAV 378
Query: 428 AGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIY 487
A +K++ +++ EV F +FG+ L+ T +L+ RG RL E+LKQ Q+ P +E +V
Sbjct: 379 ADRLKIDYSRFIEVEVFTKFGAHLEEETAKLIRRGERLREILKQPQFHPFPLEHEVLSFI 438
Query: 488 CGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIV 542
G LD + + E + I + +++ I +DG + +LK +
Sbjct: 439 IIESGILDNVTIPSVRKVCDEIIKKITPAFPEIINRIIQDGLLGKTDLGTLKDFI 493
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 412 bits (1015), Expect = e-113
Identities = 203/433 (46%), Positives = 290/433 (66%), Gaps = 8/433 (1%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 129
GRV + DGIA V GL++ E++ F G+ G A L+ D + VV+ D ++ V
Sbjct: 40 GRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAV 99
Query: 130 KRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQT 189
RTGA+++VP G Q+LGRVVD LG P+DG P+D + + AP II R V EP+ T
Sbjct: 100 ARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDT 159
Query: 190 GIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQ 249
G+ VD+L IGRGQRELIIGDR TGKT+LAID I+NQ+ + + C+YVAIGQ
Sbjct: 160 GVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSD--------VICVYVAIGQ 211
Query: 250 KRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIY 309
+ S V +++ + GA + V A A+ A LQ++AP++G ++ E+FRD G+HAL++
Sbjct: 212 RASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVV 271
Query: 310 DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIE 369
DDL+K A +R+++LL R PPGREAYPGD+FY+H+RLLERAAK+S +GGGSL+ALP+ E
Sbjct: 272 DDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAE 331
Query: 370 TQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAG 429
T AG+++AYIPTN+ISITDGQI L++ LF RPA++VGLSVSRVG AQ A++ +G
Sbjct: 332 TDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASG 391
Query: 430 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCG 489
++L+ AQ+ E+ AF +FG DA + + RG R+ L+ Q ++ + ++V ++
Sbjct: 392 RLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKAL 451
Query: 490 VRGHLDKLDPSKI 502
G LD + P +
Sbjct: 452 AAGTLDAMSPDLV 464
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 409 bits (1008), Expect = e-113
Identities = 201/441 (45%), Positives = 292/441 (66%), Gaps = 8/441 (1%)
Query: 62 PKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK 121
P+ + E G V S+GDGIA V GL + ++++ F G + L +G V+ +
Sbjct: 30 PRLRIGEYGTVASVGDGIAWVTGLPSAAMDDVLMFEDGSWAVVFALTKKRIGAVLLHQSE 89
Query: 122 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRV 181
+ G + G +DVPVGE +LGRV+D +GNP+DG P++T++R + +P II R
Sbjct: 90 NLTAGTPARLAGRTLDVPVGETLLGRVIDPIGNPLDGGRPLETRNRRPLDSPSPPIIARD 149
Query: 182 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 241
V++P+ TG + VD+LVPIG+GQR+LIIGD TG+++LAID ++NQ KG + +
Sbjct: 150 FVQQPLYTGTRLVDTLVPIGKGQRQLIIGDEGTGRSSLAIDAVLNQ----KGREVR---- 201
Query: 242 CIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDN 301
C+YV IGQKRSTV ++ L + GA+ YT +V A L+YLAP++GCA+ E +
Sbjct: 202 CVYVLIGQKRSTVVGTIELLRNYGALAYTTVVVGEAGSLPGLKYLAPFAGCAIAEDWMAR 261
Query: 302 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 361
G L++YDDLS A YR++SLLLRRPPGREAYPGD+FYLH+RLLERA ++ GGGS
Sbjct: 262 GHDTLVVYDDLSTHAQTYRELSLLLRRPPGREAYPGDIFYLHARLLERATALNPANGGGS 321
Query: 362 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 421
+TALP++ET+ G++ AYIPTN+ISITDGQI+L+++LF G +PAI+V SVSR+G AQ
Sbjct: 322 MTALPIVETRLGEIEAYIPTNLISITDGQIYLDSDLFAAGFKPAIDVTRSVSRIGGKAQH 381
Query: 422 KAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEE 481
+K+ AG MKL+ Q+ E+ F +FG+ L++ + + RG L E+L+Q + P+ E
Sbjct: 382 PRIKEEAGRMKLDYLQFLELEIFTRFGARLESGMEARIRRGRLLREILRQERLQPLPPEF 441
Query: 482 QVAIIYCGVRGHLDKLDPSKI 502
Q+A + G LD + P +
Sbjct: 442 QLAWMTAYNEGLLDAMPPGSV 462
>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
major
Length = 574
Score = 400 bits (984), Expect = e-110
Identities = 209/413 (50%), Positives = 283/413 (68%), Gaps = 13/413 (3%)
Query: 102 GMALNLEPDN-VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID--- 157
G+ NLE D +G+++ N ++ G V TG ++ +PVG +LG+VV+ LG+ +
Sbjct: 80 GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGL 139
Query: 158 ---GKGPIDTKSRM-RVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQ 213
+ ++++ + +V AP I+ R V + TG KAVD+++PIGRGQRELI+GDRQ
Sbjct: 140 LTRSRALLESEQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQ 199
Query: 214 TGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIV 273
TGKT++A+ TIINQ R N+ K + IYV+IGQ+ S VA+I + L GA+ YT ++
Sbjct: 200 TGKTSIAVSTIINQVRSNQQILSKNAVISIYVSIGQRCSNVARIHRLLRSYGALRYTTVM 259
Query: 274 SATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGRE 333
+ATA++ A LQYLAPYSG MGE+F + G+H L +YDDLSKQAVAYRQ+SLLLRRPPGRE
Sbjct: 260 AATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGRE 319
Query: 334 AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 393
AYPGDVFYLHSRLLERAA +S GGGS+TALP++ET + DV+AYI TNVISITDGQI+L
Sbjct: 320 AYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYL 379
Query: 394 ETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 453
+T+LF G RPA+N+GLSVSRVGS+AQ AMK VAG +K LA+YR++AA + GS +
Sbjct: 380 DTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADSVGGSQVQT 439
Query: 454 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFE 506
+ RG R L Q P + +Y + G+LD + + +E
Sbjct: 440 VP---MIRGARFVALFNQKN--PSFFMNALVSLYACLNGYLDDVKVNYAKLYE 487
>UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1;
Naegleria gruberi|Rep: ATP synthase F1 subunit alpha -
Naegleria gruberi
Length = 550
Score = 387 bits (953), Expect = e-106
Identities = 209/463 (45%), Positives = 291/463 (62%), Gaps = 27/463 (5%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSS---GLKGMALNLEPDNVGVVVF-GNDKLIKE 125
G++ SI D + GL+N+ E+V+F S L G LNLE V +V+ G +K
Sbjct: 13 GKIKSIQDNVIIATGLENVFVGEVVKFKSQESNLLGQVLNLEKSQVRIVMINGQQSHLKS 72
Query: 126 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG---------PIDTKSRMRVGIKAPG 176
D+V RT V G +LGRVV LG + + I + V I APG
Sbjct: 73 NDLVYRTYKDVKTKAGYGVLGRVVSPLGECYNEEDFDELSYLFDDISLIEDVSVEIPAPG 132
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
II R VR P TGI VD L+P+G GQRELIIGD+ TGKT+LAI ++NQ+ N +
Sbjct: 133 IIEREPVRVPFLTGINVVDCLIPVGCGQRELIIGDQNTGKTSLAISAVLNQRLVNNVIHK 192
Query: 237 KKK--------------LYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAP 282
K + + CIYV +G +RS A++ K L GA+NYT +V + A AA
Sbjct: 193 KWRALESEIKIDRHSNFITCIYVTVGTRRSEGARLKKILDKMGALNYTSMVFSHADQAAA 252
Query: 283 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 342
LQ++APY+GCA+GE+FR+ G A+++YDDLS+ AVAYRQMSLLL+RPPGREAYPGDVFY+
Sbjct: 253 LQFMAPYAGCAIGEWFRNKGYRAIVVYDDLSQHAVAYRQMSLLLKRPPGREAYPGDVFYV 312
Query: 343 HSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGI 402
HSRLLERAA++ G GSLTALPVIET+ GD+SAYIPTNVISITDGQIFL ++L +G+
Sbjct: 313 HSRLLERAAQLHRNKGAGSLTALPVIETKGGDISAYIPTNVISITDGQIFLSSQLANQGV 372
Query: 403 RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRG 462
RPA+NVGLSVSRVGS+AQ ++ ++ +K + + ++ + + G ++D + RG
Sbjct: 373 RPAVNVGLSVSRVGSSAQYTSVNGISKKIKADYSMFKTYESVEKLGGEIDPIVLSYIVRG 432
Query: 463 MRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAF 505
R+ +Q Y + + +QV ++ G +D+++ + ++ F
Sbjct: 433 KRINVYFQQSLYETLRLYQQVVCLFALAEGFVDEIELNCVSNF 475
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 380 bits (936), Expect = e-104
Identities = 190/441 (43%), Positives = 281/441 (63%), Gaps = 8/441 (1%)
Query: 66 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 125
L+E GRV I DG+ GL+N + V +G+ L L + VG+ + I E
Sbjct: 20 LKENGRVEKISDGVIFSSGLENAALHQAVTIDGRHRGVILELNEEFVGIGLIDKTNDILE 79
Query: 126 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRE 185
G V T ++V + E + GR++D G + + + P I+ SV
Sbjct: 80 GMSVSVTDHFIEVNLFEDMAGRIIDTTGKMLYDVSDEQPTASSPLFCVTPAIMTIDSVTR 139
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P+ TG+ +DS+ PIGRGQR+LI+G+RQ+GKT +A+DTIINQ N ++CIYV
Sbjct: 140 PLNTGLAVIDSITPIGRGQRQLILGNRQSGKTQIAVDTIINQHNQN--------VHCIYV 191
Query: 246 AIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHA 305
AIG K + +A++++ L GA++Y+ +V+ ASD+ QYL PY+G A+ E RD GK
Sbjct: 192 AIGLKAAYIAEVIETLRKHGAMDYSTVVATAASDSLTAQYLTPYAGMAVAEALRDQGKDV 251
Query: 306 LIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTAL 365
LII+DDL+K A AYR ++LL RPPGREAYPGD FY+HS LLERA +M+ GGGS+TA+
Sbjct: 252 LIIFDDLTKHADAYRAITLLFNRPPGREAYPGDSFYIHSSLLERAVQMNQDHGGGSITAI 311
Query: 366 PVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMK 425
P+IET + DV+AYIPTNVISITDGQ+FL+++LF +G +PA++VG+SVSR+G AQ ++
Sbjct: 312 PMIETLSDDVTAYIPTNVISITDGQLFLKSDLFNRGQKPAVDVGVSVSRIGGDAQHPIIR 371
Query: 426 QVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAI 485
+++ ++ L L+QY E+ FG+ LD + +++ G LTEL KQ P+++ E + I
Sbjct: 372 KLSKNLTLILSQYEELKELLDFGNALDDGSMKMVTDGRMLTELFKQNILSPLSVTELITI 431
Query: 486 IYCGVRGHLDKLDPSKITAFE 506
+Y G L K+ P+ + +F+
Sbjct: 432 LYAFQNGFLTKMAPANVQSFK 452
>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
alpha chain, mitochondrial precursor; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to ATP synthase alpha
chain, mitochondrial precursor - Canis familiaris
Length = 301
Score = 350 bits (861), Expect = 5e-95
Identities = 179/246 (72%), Positives = 196/246 (79%), Gaps = 22/246 (8%)
Query: 103 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 162
M+LNL PD VGVVVFGNDKLIKEGDIVKRT A VDVPVG+++ G VVDALGN DGKGPI
Sbjct: 1 MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVDALGNATDGKGPI 60
Query: 163 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 222
+K+ RVG+K PGIIP +SVREPM+TGIKAVDSLVPIGRGQ ELII + QTGKT++AID
Sbjct: 61 GSKTHRRVGLKGPGIIPPISVREPMKTGIKAVDSLVPIGRGQHELIISNWQTGKTSIAID 120
Query: 223 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAP 282
TIINQ+ N G DEKKKLYCIYV IGQKRSTVAQ+ KRLTDA A+ YTI+
Sbjct: 121 TIINQKHLNDGTDEKKKLYCIYVVIGQKRSTVAQLAKRLTDADAMKYTIV---------- 170
Query: 283 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 342
GE+FRDN KHALIIYDDLSKQAVAYRQMSLLL R PGREAYP DVFYL
Sbjct: 171 ------------GEYFRDNSKHALIIYDDLSKQAVAYRQMSLLLLRAPGREAYPDDVFYL 218
Query: 343 HSRLLE 348
HSRLLE
Sbjct: 219 HSRLLE 224
Score = 81.0 bits (191), Expect = 8e-14
Identities = 42/53 (79%), Positives = 44/53 (83%)
Query: 400 KGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLD 452
K I AINV LSVS +GS AQT AMKQVAG+MKL LAQYREVAAFAQF SDLD
Sbjct: 244 KRIHLAINVSLSVSCIGSVAQTSAMKQVAGTMKLGLAQYREVAAFAQFSSDLD 296
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 344 bits (845), Expect = 4e-93
Identities = 174/325 (53%), Positives = 234/325 (72%), Gaps = 9/325 (2%)
Query: 174 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 233
AP I+ R SV EP+ TGI ++D+++PIGRGQRELIIGDRQTGKT++ +DTI+N +
Sbjct: 108 APSIVSRQSVCEPLATGIVSIDAMIPIGRGQRELIIGDRQTGKTSICLDTIVNLKY---- 163
Query: 234 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCA 293
+K+ +YV +GQK ++V ++L IV A+AS +A +QYL+ Y+G A
Sbjct: 164 ----EKVLSVYVPVGQKAASVLDAYQQLVKRDVYQALAIVMASASTSAVMQYLSVYAGTA 219
Query: 294 MGEFFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 352
+ EFF N I YDDL+KQA AYR++SLLLRRPPGREA+PGD+FY+HSRLLER+AK
Sbjct: 220 LAEFFMYNLSLPVFIAYDDLAKQASAYREISLLLRRPPGREAFPGDIFYVHSRLLERSAK 279
Query: 353 MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV 412
++ G GS+TA P++ET A DVSA+IPTN+ISITDGQ+FL T+LF +GI+PAI+VG+SV
Sbjct: 280 LNYACGSGSITAFPIVETLAQDVSAFIPTNLISITDGQLFLSTDLFNQGIKPAIDVGISV 339
Query: 413 SRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQG 472
+RVGSAAQ MK VAG +KL LAQ+ E+ AF+QF SDL T + L G R+ E+LKQ
Sbjct: 340 TRVGSAAQQDQMKMVAGRLKLTLAQFVELEAFSQFASDLGEDTARALANGRRIREVLKQD 399
Query: 473 QYVPMAIEEQVAIIYCGVRGHLDKL 497
PM+I +Q A++ G L ++
Sbjct: 400 VASPMSIPQQCAVLSLAGSGVLARI 424
>UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100
entry - Canis familiaris
Length = 383
Score = 314 bits (772), Expect = 3e-84
Identities = 210/400 (52%), Positives = 249/400 (62%), Gaps = 66/400 (16%)
Query: 47 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 106
A +S++ EE ILGA ADLE+TG VLS GDGI R+ GL+N QAEEMV FSS LK M LN
Sbjct: 49 AGVSSVSEECILGANTSADLEDTGCVLSFGDGIVRISGLRNAQAEEMVGFSS-LKCMCLN 107
Query: 107 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 166
LE D +VV + KEGD VKRTGAI+DV VG+++LGRVV A+G D+K
Sbjct: 108 LEADM--LVVLHLEMNTKEGDTVKRTGAIMDVLVGKKLLGRVVGAIG---------DSKD 156
Query: 167 RMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 226
+VG+K I +SV+EPM+TGIKAVDSLVPIG GQ E+
Sbjct: 157 HRQVGLKVLRITLPISVQEPMETGIKAVDSLVPIGPGQHEIC------------------ 198
Query: 227 QQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYL 286
F+ G DE+KKLY IY+A+GQKRSTV Q+ KRLTDA A I+VS TA+DAAP +YL
Sbjct: 199 ---FSDGSDERKKLYYIYIAVGQKRSTVGQL-KRLTDANATKCPIVVSTTATDAAPHRYL 254
Query: 287 APYSGCAM-GEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 345
YSG ++ GE+ +DNG HA + Y LS GD YLHS
Sbjct: 255 NLYSGSSIGGEYLKDNGTHAPVTYGRLS-----------------------GDRLYLHSH 291
Query: 346 LLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA 405
LLERAAKM+D M +L L AGDVSAY P DGQIFLETE+FYK I
Sbjct: 292 LLERAAKMNDSM-VVALDCLTSHRNTAGDVSAYGP-------DGQIFLETEMFYKIICLT 343
Query: 406 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFA 445
INVGLSVS + AQT+AMK VAG+ KLELA EVAAFA
Sbjct: 344 INVGLSVSCIRFGAQTRAMKLVAGTTKLELALKHEVAAFA 383
>UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2;
Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 529
Score = 296 bits (726), Expect = 1e-78
Identities = 164/428 (38%), Positives = 251/428 (58%), Gaps = 12/428 (2%)
Query: 71 RVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMAL--NLEPDNVGVVVFGNDKLIKEGDI 128
++ SI D I V G + E+V+FS+ +G+ L + VG+V + ++ G
Sbjct: 6 KITSIKDNIVTVVGNHPYKFLEVVKFSNKTQGIVLKGSAFQAEVGLVNVDSHNQLEVGSE 65
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGNPI--DGKGPIDTKSRMRVGIKAPGIIPRVSVREP 186
TG + V + + ++G VVD N + K D + + V +A I R +V P
Sbjct: 66 AIATGELFKVKIHDNLIGSVVDVSLNEVLTFSKRGQDDIAILDVFEEAKPIYSRKAVNAP 125
Query: 187 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVA 246
++TGI A+D+++PIGRGQ++LIIGD+ TGKTA+A++ I+ Q EK + IY A
Sbjct: 126 LETGITAIDAVLPIGRGQKQLIIGDKGTGKTAIALNAILAQ--------EKSNVISIYAA 177
Query: 247 IGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHAL 306
+G+KR V +I L ++ TII+S++A D A +YL PY ++ E ++ G+ L
Sbjct: 178 VGKKREEVVEIFSVLKSRKLMDKTIIISSSADDLAVTKYLLPYVSMSVAEHYQSLGRDVL 237
Query: 307 IIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALP 366
++ DDL+ A AYR++SLL PGREAYPGD+FY HSRLLERA K SD+ GGGS+T +P
Sbjct: 238 VVIDDLTNHADAYREISLLSGSAPGREAYPGDIFYTHSRLLERAGKFSDEFGGGSITCIP 297
Query: 367 VIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQ 426
+ +T A D+S YIPTN+ISITDGQIF T+LF G RPAI++GLSVSR+GS AQ +M Q
Sbjct: 298 IAQTLASDISGYIPTNLISITDGQIFTSTKLFNSGKRPAIDIGLSVSRIGSIAQKYSMIQ 357
Query: 427 VAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAII 486
+ +K + ++ + ++ + + G L+ Q +Y + ++
Sbjct: 358 ASKGLKTLITEFLNQKKLSSVLTERTKRDLEKMELGWVFEALMDQREYEVVEYHTTTILL 417
Query: 487 YCGVRGHL 494
+ +G+L
Sbjct: 418 FLLKKGYL 425
>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
n=1; candidate division TM7 genomosp. GTL1|Rep:
Sodium-transporting two-sector ATPase - candidate
division TM7 genomosp. GTL1
Length = 495
Score = 281 bits (688), Expect = 5e-74
Identities = 152/403 (37%), Positives = 230/403 (57%), Gaps = 11/403 (2%)
Query: 69 TGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDI 128
TG V+ + + V GL I MV F SG +GM ++ + +V+ + G +
Sbjct: 36 TGEVVGLDRFLLTVKGLDGIAVGAMVLFESGQRGMVRDVNAETA-LVLNLEAETTPLGTL 94
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 188
I VGE ++GR+V L P+D KG + + +AP I+ R + E +
Sbjct: 95 AVLQDNIPTTRVGEGLIGRIVTPLCRPLDDKGTVRLDDTRPLFYEAPSIMERTMLSEQLP 154
Query: 189 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIG 248
+G+ AVD+L PI GQR I+GD + GK+ T + Q N+ + + +YV IG
Sbjct: 155 SGVTAVDALFPIVLGQRIAILGDTKAGKS-----TFLGQLGVNQIDTGR---IVVYVLIG 206
Query: 249 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALII 308
++R + ++V L GAI ++I+V A D+ Y+APY GCA+ E G+ +++
Sbjct: 207 KRRVEIDRLVATLNQTGAIKHSIVVVANIFDSIAQSYIAPYVGCAIAEHLWYGGRDVIVV 266
Query: 309 YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVI 368
YDDL+ A YR++SLL PGR++YPGD+FY HS LLERA K++ G +LTALP +
Sbjct: 267 YDDLTSHAKVYREISLLSEANPGRDSYPGDMFYAHSSLLERAGKLAS--SGKTLTALPAL 324
Query: 369 ETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVA 428
T D++AY+PT+++SITDGQI + F + IRPA+N GLSVSRVG QTK K++A
Sbjct: 325 VTPGDDITAYLPTSIMSITDGQIIFDLATFRQNIRPAVNTGLSVSRVGGRVQTKRQKEIA 384
Query: 429 GSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQ 471
G + L YR+ F+ FGS++ T++ L G + + L+Q
Sbjct: 385 GGLFKSLVAYRQAQEFSHFGSEVAPDTERSLRLGRLIYDALRQ 427
>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
Length = 516
Score = 248 bits (606), Expect = 4e-64
Identities = 144/410 (35%), Positives = 237/410 (57%), Gaps = 23/410 (5%)
Query: 72 VLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK---EGDI 128
+ SI D I V G N ++ ++ + L+ ++ ++V + +K E D+
Sbjct: 5 IKSIQDNIIYVEGEFNYSQSQVFLINNKIHAYLLSASVNSANLLVESEIESLKINDELDL 64
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGN---PIDGKGPIDTKSRM----RVGIKAPGIIPRV 181
V+ +G I ++ G+++D G+ PI+ ID ++ KA G++ R
Sbjct: 65 VENSGKISTY---QKFYGKIIDIFGHIKYPIEANDIIDENEEKIGTGKIFNKALGMMFRK 121
Query: 182 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 241
S+ EP+QTGI ++D L+P+G+GQRELIIGDR+TGKT++A++TII+Q+ N
Sbjct: 122 SLNEPVQTGIASIDMLIPLGKGQRELIIGDRRTGKTSVALNTIISQKNTNTK-------- 173
Query: 242 CIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDN 301
+YVAIGQ+++ + I L + + TII+ A++ + Q+ A Y G E N
Sbjct: 174 AVYVAIGQRKTNINFIYNTLEEFDVLKNTIILEASSENLYH-QFFALYVGMTHAENIAKN 232
Query: 302 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 361
G +I+ DDLSK A YR+M+LL+ +P GREA+PGD+F+ HS++LERA K ++ G+
Sbjct: 233 GDDVIIVIDDLSKHANIYREMALLINKPAGREAFPGDIFFTHSKVLERAGKFKNE-NWGT 291
Query: 362 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 421
+TALP++ET GD+++ I +N+ISITDGQI + +EL G PAI++ LSVSR GS Q
Sbjct: 292 ITALPIVETIEGDITSLISSNIISITDGQIIMSSELAASGKFPAIDIELSVSRTGSKVQN 351
Query: 422 KAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQ 471
K + + + + + Y+ +++ + + +L++G L L Q
Sbjct: 352 KVLSKYSKKISKTFSLYKRNLKYSEIKYNFSSEIFDILSKGEVLENLFIQ 401
>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
Leuconostocaceae|Rep: ATP synthase subunit alpha -
Leuconostoc durionis
Length = 297
Score = 241 bits (591), Expect = 3e-62
Identities = 121/217 (55%), Positives = 162/217 (74%), Gaps = 8/217 (3%)
Query: 79 IARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV 138
IAR GL N + E+V F++G GM NLE VG++V G+ + I+EGD VKRTG +++V
Sbjct: 1 IARATGLANALSGELVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEV 60
Query: 139 PVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLV 198
PVGE+++GRVV+ALG PIDG G ++T V KAPG++ R SV EP+QTGIKA+D+LV
Sbjct: 61 PVGEELIGRVVNALGQPIDGLGDLNTTKTRPVEAKAPGVMARKSVSEPLQTGIKAIDALV 120
Query: 199 PIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIV 258
PIGRGQRELIIGDR+TGKT++A+DTI+NQ K +D + IYVA+GQK STV + V
Sbjct: 121 PIGRGQRELIIGDRKTGKTSIAVDTILNQ----KDQD----MIVIYVAVGQKDSTVREQV 172
Query: 259 KRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMG 295
+ L GA++YTI+V+A ++AA L YLAPY+G A+G
Sbjct: 173 ETLKKMGAMDYTIVVNAGPAEAAALLYLAPYAGAAIG 209
Score = 158 bits (383), Expect = 4e-37
Identities = 73/89 (82%), Positives = 82/89 (92%)
Query: 331 GREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 390
GREAYPGDVFYLHSRLLERAAK+SD++GGGS+TALP+IETQAGDVSAYIPTNVISITDGQ
Sbjct: 209 GREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQ 268
Query: 391 IFLETELFYKGIRPAINVGLSVSRVGSAA 419
IFL+ + FY G+RPAI+ G SVSRVG A
Sbjct: 269 IFLDADQFYAGVRPAIDAGTSVSRVGGDA 297
>UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6;
Mycoplasmataceae|Rep: ATP synthase alpha chain -
Mycoplasma agalactiae
Length = 524
Score = 241 bits (589), Expect = 4e-62
Identities = 150/418 (35%), Positives = 226/418 (54%), Gaps = 19/418 (4%)
Query: 63 KADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGND-- 120
K+ + R+ ++ D I V G N + +++ S + + + N+
Sbjct: 14 KSASNDMPRISAVFDYIIEVKGKFNYRQQQVFTSSKNKNARLFLISAFSDTAYLLSNEEG 73
Query: 121 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK----APG 176
+ + D + +V ++ G+V+D GN I K V + A
Sbjct: 74 RKLAINDQIVLLNETNEVFTSKEHFGKVIDIYGNAILPVAQAIQKDDSAVSSEIFKLAHD 133
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
++ + E + TGI A+D L+PIG+GQRELIIGDRQTGKT +A++ IINQ
Sbjct: 134 LMKVQRLNEQLYTGINAIDLLIPIGKGQRELIIGDRQTGKTHIALNAIINQAA------- 186
Query: 237 KKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGE 296
K CIYVAIGQKR ++++I L A+ TII+ A A+ A QYLAPY G A E
Sbjct: 187 -KGTKCIYVAIGQKRESISRIYNTLNQHNALKNTIIIDAPANSAYE-QYLAPYVGMAHAE 244
Query: 297 FFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDK 356
AL+I+DDL+K A +R+++LL +P G+EA PGD+F+ HS+LLERA K
Sbjct: 245 NISATDD-ALVIFDDLTKHANIFREIALLSNKPVGKEAMPGDMFFAHSQLLERAGSYKGK 303
Query: 357 MGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVG 416
++TALP+I+T GD+++ I +NVISITDGQI +LF KGI PAI++ SVSR G
Sbjct: 304 K---TITALPIIQTVDGDITSLIASNVISITDGQIVTSAKLFAKGILPAIDIDFSVSRTG 360
Query: 417 SAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQY 474
S+ Q + + +VAG + +Y+ + +L+ L+ +G + +L Q Y
Sbjct: 361 SSVQDRTIAKVAGVINKIYRKYKRHLKLSMLDYELNKEVSNLMYKGKMVDKLFAQRGY 418
>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
Mycoplasma pulmonis
Length = 513
Score = 237 bits (581), Expect = 4e-61
Identities = 142/427 (33%), Positives = 245/427 (57%), Gaps = 18/427 (4%)
Query: 72 VLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKR 131
+ SI D I V G + + E+ + + +KG L+++ +++ G+ IK G +
Sbjct: 8 IKSIKDYIVEVQGDYDFRLYEVFQLTDDVKGFCLSVDEKRTFLLIDGDTSKIKVGTEIIP 67
Query: 132 TGAIVDVPVGEQILGRVVDALGNPIDGKGP---IDTKS--RMRVGIK-APGIIPRVSVRE 185
+ + G+++D G + + I K+ K A GI RV + E
Sbjct: 68 LESRFIAKTYKDYFGKIIDIDGKVLYSESEDQEISEKAYENENSAFKVASGIQDRVKLNE 127
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P++TGI ++D L+PIG+GQR+LI+GD +TGKT++A+ T+INQ+ E++ K IYV
Sbjct: 128 PLETGIFSIDILLPIGKGQRQLILGDSKTGKTSIALSTMINQK-----ENDIK---IIYV 179
Query: 246 AIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHA 305
+IG K + + +I K + + + TI++ A+ SD + Q+L PY A E +G+
Sbjct: 180 SIGLKSNDLKRIYKTIVEQKIAHKTILMHAS-SDNSFQQFLIPYVAMAHAENIMQSGEDV 238
Query: 306 LIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTAL 365
LII+DDL+ A R+++LL +P G+EA+PGD+FY HS+LLERA K + G S+T
Sbjct: 239 LIIFDDLTNHANVLREIALLTGKPVGKEAFPGDLFYSHSKLLERAGKFKN---GYSITCF 295
Query: 366 PVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMK 425
P++ T D+++ + +N+ SITDGQI +E+ +GI PAI++GLSVSR GS+ Q+ ++
Sbjct: 296 PIVRTINNDMTSLLASNIASITDGQIVTNSEIKDQGILPAIDIGLSVSRTGSSVQSVSLS 355
Query: 426 QVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAI 485
++A + ++Y++ F+ DL+ + + ++ +G L ++L Q ++ + + I
Sbjct: 356 KIAIEISKIYSKYKQNEKFSDTNFDLNDSVRDIIKKGKILLKILNQKEFQAYSRSFNLII 415
Query: 486 IYCGVRG 492
Y V G
Sbjct: 416 AYIVVWG 422
>UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplasma
hyopneumoniae|Rep: ATP synthase alpha chain - Mycoplasma
hyopneumoniae (strain 232)
Length = 512
Score = 233 bits (569), Expect = 1e-59
Identities = 155/445 (34%), Positives = 241/445 (54%), Gaps = 23/445 (5%)
Query: 71 RVLSIGDGIARVYGLKNIQAEEM--VEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGD 127
+V S+ D + V G N Q ++ V+ +K + + D ++F N K I+ D
Sbjct: 4 KVASVLDYVVLVKGEYNWQEQQFFQVKDKPEIKAVVIQASQDQA-YLLFNNQKGKIQIND 62
Query: 128 IVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT---KSRMRVGIKAPGIIPRVSVR 184
+ V + G+++D GN I+ + T + R A G++ R +
Sbjct: 63 ELIELPNFDKVLTSMEYFGKIIDLSGNIIEPRAARPTTFLQYRHSAFETAAGVLRRELID 122
Query: 185 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIY 244
+ TGI A+D PIG GQRELI+GDRQTGKT + I+TIINQ+ + + CIY
Sbjct: 123 RQIYTGIYAIDLFNPIGFGQRELIVGDRQTGKTHIGINTIINQK-------DSRTTKCIY 175
Query: 245 VAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKH 304
V+IGQKR + + L A+ TI++ A ++ QYLAPY A E N
Sbjct: 176 VSIGQKRQNLVSLYHDLVQNEAMANTIVLHAPSTSPFD-QYLAPYFAMAHAENLSYN-YD 233
Query: 305 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTA 364
LI++DDL+K A +R+++LL +P G+EA+P D+F+ HS+LLER+ K +G S+TA
Sbjct: 234 VLIVFDDLTKHASVWREVALLTNQPIGKEAFPADIFFAHSKLLERSGKF---IGRKSITA 290
Query: 365 LPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAM 424
LP+++T D++A + +NVISITDGQI + LF +G PAIN+GLSVSR GS+ Q + +
Sbjct: 291 LPILQTVDNDITALVSSNVISITDGQIITSSALFAQGKIPAINIGLSVSRTGSSVQAQNI 350
Query: 425 KQVAGSMKLELAQYR---EVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEE 481
+ ++ + Y+ ++A + DL+ T LL +G ++ + L Q Y ++
Sbjct: 351 RLISKEISSLYYNYQKQIKLAKLEKLDYDLNKETSDLLFKGSQVEQFLIQKGYSHYSLTS 410
Query: 482 QVAIIYCGVRGHL-DKLDPSKITAF 505
+ I G L D DP+K+ F
Sbjct: 411 VLMGIKIISWGLLKDVQDPTKVVDF 435
>UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 509
Score = 225 bits (549), Expect = 3e-57
Identities = 140/409 (34%), Positives = 233/409 (56%), Gaps = 21/409 (5%)
Query: 71 RVLSIGDGIARVYGLKNIQAEEM--VEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDI 128
+V+SI D + V G + + ++ +K + L+ E + ++V + I+ GD
Sbjct: 6 KVVSIIDYVIEVQGKFPFEEGQFFTIKNKPSVKALVLSAEINRAFLLVDTSKVPIEIGDE 65
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGN---PIDGKGPIDTKSRMRVG---IKAPGIIPRVS 182
+ A ++ Q G+VV+ G P+ + + +R G + G++ R
Sbjct: 66 LIVKPAYNEIQTSRQFFGKVVNIDGEIVYPVTQNKTVVYEPNLRKGNIFFQPVGMLERQH 125
Query: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 242
+ E + TGI ++D PIGRGQRE+I+GD+QTGKT +A++TIINQ+ N G + C
Sbjct: 126 LSEQLYTGILSIDLFNPIGRGQREIIVGDKQTGKTHIALNTIINQR--NSG------VKC 177
Query: 243 IYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 302
IYV+IGQ ++ + L +A A++YTII A++ +A QYL P+ A E N
Sbjct: 178 IYVSIGQNNKNLSNVYTTLKNANALDYTIIFEASSENAFD-QYLIPHVAMAHAENLSFND 236
Query: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSL 362
LI++DDL+K A R++SLL+ +P G+EA+P D+F+ HS+LLER+ + +G S+
Sbjct: 237 D-VLIVFDDLTKHANICREISLLIDKPIGKEAFPPDIFFTHSKLLERSGRF---IGRKSI 292
Query: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422
ALP+++T G++++ I +N+ISI+DGQI T+LF +G PA+++ SVSR GS+ Q K
Sbjct: 293 AALPIVKTVDGNLASLISSNLISISDGQIVTSTKLFLEGKIPAVDLDFSVSRTGSSIQKK 352
Query: 423 AMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQ 471
++ QV+ + Y + +L+ T +L+ G + +LL Q
Sbjct: 353 SVAQVSAKLSKIYHAYIRQEKLSSIDYELNKETAKLIFSGESIEKLLVQ 401
>UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplasma
synoviae 53|Rep: ATP synthase alpha chain - Mycoplasma
synoviae (strain 53)
Length = 514
Score = 225 bits (549), Expect = 3e-57
Identities = 133/341 (39%), Positives = 203/341 (59%), Gaps = 21/341 (6%)
Query: 138 VPVGEQILGRVVDALGN--PIDGKGPIDTKSRMRVGIKAPGIIPRVSVR-EPMQ----TG 190
V + G+++D N P K ++ KS+ + P P+ + +P++ TG
Sbjct: 77 VATSREFFGKIIDIQNNIYPHKAKASLN-KSKYYSSLSTPFNNPKELLNYQPLKKQLLTG 135
Query: 191 IKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQK 250
VD L+PIGRGQR+LIIGDR+TGKT LA++TIINQ+ N+G + CIYVAIGQ+
Sbjct: 136 YVVVDLLIPIGRGQRQLIIGDRKTGKTFLALNTIINQK--NQG------VKCIYVAIGQQ 187
Query: 251 RSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYD 310
+ + + L + GA+++TII++A A D+ QYLAPY A E + + L+I+D
Sbjct: 188 HAQLTSTYQLLKENGALDHTIIINAPA-DSPYEQYLAPYVAMAHAENIAKD-EDVLVIFD 245
Query: 311 DLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIET 370
DL+ A YR+++LL +P G+EA+PGD+F+ HSRLLER+ + + K S+TALP+++T
Sbjct: 246 DLTTHANIYREIALLTNKPVGKEAFPGDMFFAHSRLLERSGRFAGKK---SITALPILQT 302
Query: 371 QAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGS 430
D+S+ I +N+ISITDGQ+ +F G PAI+ LSVSR+G+A Q K M + +
Sbjct: 303 VDNDISSLIASNIISITDGQLVTNANIFQSGQLPAIDTELSVSRIGAAVQEKNMAKTSKE 362
Query: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQ 471
+ Y+ A + DL+ T L+ G + + Q
Sbjct: 363 IGKIYKAYKRQAKLSSLKYDLNDETNALIVDGQLVEGIFSQ 403
>UniRef50_UPI000023E632 Cluster: hypothetical protein FG01079.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01079.1 - Gibberella zeae PH-1
Length = 175
Score = 222 bits (543), Expect = 2e-56
Identities = 120/197 (60%), Positives = 142/197 (72%), Gaps = 24/197 (12%)
Query: 353 MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV 412
M+DK+GGGS+TALPVIETQ GDVSAYIPTNVISITDGQIFLE ELFYKGIRPAINVGLSV
Sbjct: 1 MNDKLGGGSMTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSV 60
Query: 413 SRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQG 472
SRVGSAAQ KAMKQVAGS+KL LAQYRE LTELLKQ
Sbjct: 61 SRVGSAAQLKAMKQVAGSLKLFLAQYRE------------------------LTELLKQK 96
Query: 473 QYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITP 532
QY PMA+ E V +I+ GV G LD + +KI +E +F H+KT+ LL+TI K+G I+
Sbjct: 97 QYSPMAVTEMVPLIFAGVNGFLDTIPVNKILQWESDFLAHLKTNETELLATIDKEGAISK 156
Query: 533 ESDASLKKIVTDFLATF 549
+++A LK +V F+ +F
Sbjct: 157 DTEAKLKDVVQSFVKSF 173
>UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform,
mitochondrial precursor; n=20; cellular organisms|Rep:
ATP synthase subunit alpha liver isoform, mitochondrial
precursor - Sus scrofa (Pig)
Length = 148
Score = 194 bits (474), Expect = 4e-48
Identities = 100/148 (67%), Positives = 112/148 (75%), Gaps = 4/148 (2%)
Query: 3 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHK----AAEISTILEERIL 58
++S R+A +VAR LP A VSK + LH S T AE+S+ILE RIL
Sbjct: 1 MLSVRVAAAVARXLPRRAGXVSKNALGSSFVAAXNLHASNTRLQKTGTAEVSSILEXRIL 60
Query: 59 GAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFG 118
GA DLEETGRVLSIGDGIARV+G +N QAEEMVEFSSGLKGM+LNLEPDNVGVVVFG
Sbjct: 61 GADTSVDLEETGRVLSIGDGIARVHGXRNXQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG 120
Query: 119 NDKLIKEGDIVKRTGAIVDVPVGEQILG 146
NDKLIKEGDIVKRTG IVDVPVG+ +LG
Sbjct: 121 NDKLIKEGDIVKRTGXIVDVPVGKDLLG 148
>UniRef50_Q9RQ78 Cluster: Alpha subunit of membrane-bound ATP
synthase; n=23; Gammaproteobacteria|Rep: Alpha subunit
of membrane-bound ATP synthase - Buchnera aphidicola
Length = 224
Score = 192 bits (468), Expect = 2e-47
Identities = 106/226 (46%), Positives = 145/226 (64%), Gaps = 15/226 (6%)
Query: 339 VFYLHSRLLERAA-----------KMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISIT 387
+FYLHSRLLERA K+ +K GSLTALP+IETQ GDVS++IPTNVISIT
Sbjct: 1 IFYLHSRLLERACRVNNTYLNTIMKVKEKNKTGSLTALPIIETQDGDVSSFIPTNVISIT 60
Query: 388 DGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQF 447
DGQ+FLE+ LF GIRPAIN G+SVSRVGSAAQ + +K+V+ ++ LAQY+E++AF+QF
Sbjct: 61 DGQLFLESNLFNSGIRPAINPGISVSRVGSAAQCEIIKKVSSGIRTALAQYQELSAFSQF 120
Query: 448 GSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEK 507
SDLD T+ L G +L E+LKQ QY M++ EQ I+Y +G ++ + KI +FE+
Sbjct: 121 SSDLDELTRNQLIYGKKLIEILKQQQYQSMSVAEQALILYSADQGFINDVKIEKIKSFEQ 180
Query: 508 EFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATFTQSQ 553
+ + +G +D +KI+T + +F SQ
Sbjct: 181 SLISFANEKFSDFMKDVNVNGDF---NDIINQKIIT-IIKSFKSSQ 222
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 161 bits (391), Expect = 4e-38
Identities = 128/430 (29%), Positives = 200/430 (46%), Gaps = 26/430 (6%)
Query: 54 EERILGAAPKADLEETGRVLSIG--DGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDN 111
E+R++G K + S+G I + +K I E++ G K + L P
Sbjct: 15 EKRLVGYYGKVSQVIGLTIESVGPLSNIGEICYIKTIDGNEVLAEVVGFKEEKVYLMP-- 72
Query: 112 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 171
GN + I G V TG + V VG+ +LGRV+D LGNPIDGKGP+ + + V
Sbjct: 73 -----LGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKGPLKYEKSIPVN 127
Query: 172 IKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 231
P + R +RE M GIKA+D L+ G+GQR I GK+ T++ N
Sbjct: 128 NTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKS-----TLLGMMARN 182
Query: 232 KGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSG 291
D + IG++ V + +++ + +++V AT+ A ++ +
Sbjct: 183 AKADLN-----VIALIGERGREVNEFIEKDLGEEGLKRSVVVVATSDTPALVRVKGAMTA 237
Query: 292 CAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAA 351
A+ E+FRD G L++ D +++ A+A R++ L + P Y VF + +LLER+
Sbjct: 238 TAIAEYFRDQGLDVLLMMDSITRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERSG 297
Query: 352 KMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLS 411
S K GS+TAL + D++ I V I DG I L +L K PAI+V S
Sbjct: 298 S-SQK---GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLAS 353
Query: 412 VSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQ 471
VSRV + T K++ K LA Y E G+ + T ++ + L E K
Sbjct: 354 VSRVINDIITDEHKELVAKFKNILATYAEAEDLINIGA-YNFGTNPKIDEAIELNE--KM 410
Query: 472 GQYVPMAIEE 481
++ I+E
Sbjct: 411 NSFLRQKIDE 420
>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
usitatus (strain Ellin6076)
Length = 449
Score = 157 bits (380), Expect = 9e-37
Identities = 105/359 (29%), Positives = 171/359 (47%), Gaps = 17/359 (4%)
Query: 126 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRE 185
GD + V VG +LGRV+D G P+D I+ + + + R + +
Sbjct: 81 GDPLAARSEDARVEVGPGLLGRVIDGFGKPMDTGPAINARESYSLHGTPTNPLDRQHITQ 140
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P+ TGI+A+D+L+P G+GQR I G GK+ T++ N D +
Sbjct: 141 PLVTGIRAIDALLPCGKGQRIGIFGGSGVGKS-----TLLGSMSRNNSAD-----VTVIA 190
Query: 246 AIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHA 305
IG++ V ++ +++V AT+ APL+ A + A+ E+FRD G +
Sbjct: 191 MIGERNREVRGFLENELGPEGRKRSVVVCATSERPAPLRVRACFVSLAIAEYFRDQGANV 250
Query: 306 LIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTAL 365
L++ D +++ A+A R++ L PP ++ Y VF L ++LERA G GS+T
Sbjct: 251 LLVMDSVTRLAMAQREIGLAAGEPPSQKGYTPSVFNLLPKVLERAG----NFGRGSITGF 306
Query: 366 PVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMK 425
+ + D + I V I DG L +L +G PAI++ SVSR+ SA T A K
Sbjct: 307 FTVLVEGDDFNEPICDAVRGILDGHFILSRDLGAQGHYPAIDILHSVSRLTSAIATPAQK 366
Query: 426 QVAGSMKLELAQYREVAAFAQFGSDLDAATQQL---LNRGMRLTELLKQGQYVPMAIEE 481
+ A ++ LA YR+ Q G+ + + L ++ L + L+Q V +EE
Sbjct: 367 EAARKIRAALAAYRDAEDLIQLGAYVSGSNPDLDASIHLRPELLDFLRQDHLVVSTLEE 425
>UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18;
Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus
subtilis
Length = 440
Score = 154 bits (373), Expect = 7e-36
Identities = 106/390 (27%), Positives = 187/390 (47%), Gaps = 18/390 (4%)
Query: 100 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 159
+K + + +N+ ++ + I G IV+ TG + V VG ++G+V+DA G P+D +
Sbjct: 58 IKAEVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD-E 116
Query: 160 GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 219
S + P + R +RE M G++++DSL+ +G+GQR I GK+ L
Sbjct: 117 SFCRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTL 176
Query: 220 AIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASD 279
+ I Q + + +G++ V + +++ + +I+V AT+
Sbjct: 177 -MGMIAKQTEADLN---------VIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQ 226
Query: 280 AAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 339
A ++ A Y+ A+ E+FRD G++ + + D +++ A+A R++ L PP + Y V
Sbjct: 227 PALMRLKAAYTATAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSV 286
Query: 340 FYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY 399
F + RLLER G++TA + D++ I V I DG I L+ L
Sbjct: 287 FAILPRLLERTGANEH----GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALAN 342
Query: 400 KGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQL- 458
KG PA+NV S+SRV S TK A + L+ Y+ G+ +++++
Sbjct: 343 KGQFPAVNVLKSISRVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREID 402
Query: 459 --LNRGMRLTELLKQGQYVPMAIEEQVAII 486
+ +L + LKQG P +EE +A +
Sbjct: 403 EAIQFYPQLIQFLKQGTDEPALLEESIAAL 432
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 153 bits (370), Expect = 2e-35
Identities = 107/348 (30%), Positives = 175/348 (50%), Gaps = 18/348 (5%)
Query: 138 VPV-GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDS 196
+PV G Q+LGRV+DALG P DG GP+ T+ V + P + R +RE + TG++A+D+
Sbjct: 109 IPVSGAQLLGRVLDALGRPFDGAGPVPTRRVDAVHSRPPHPLRRQRIREALPTGVRALDA 168
Query: 197 LVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQ 256
P+GRGQR + GK+ T++ D + +G++ V +
Sbjct: 169 FTPLGRGQRLGLFAGSGVGKS-----TLLGMIARGSAAD-----VVVIGLVGERGREVRE 218
Query: 257 IVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQA 316
+++ A + +++V AT+ APL+ A ++ A+ E +RD GK+ L++ D +++ A
Sbjct: 219 FLEKDLGAEGLARSVVVVATSDSPAPLRLRAAFTATAIAESYRDQGKNVLLLMDSVTRFA 278
Query: 317 VAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVS 376
+A R++ L + PP Y VF L RLLERA G++TAL + + D++
Sbjct: 279 MAQREIGLAIGEPPATRGYTPSVFALLPRLLERAGAGET----GAITALYTVLVEGDDMN 334
Query: 377 AYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELA 436
I V I DG + L L + PAI+V SVSR+ + + A + LA
Sbjct: 335 EPIADAVRGILDGHLVLSRALAHANHYPAIDVLESVSRLTRDICSATEVESAARARELLA 394
Query: 437 QYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVA 484
Y+ G+ A+ L+R + L E LK Q++ ++E VA
Sbjct: 395 IYKRNEDLITIGAYQKGAS-AALDRAVTLHEPLK--QFLRQRVDEIVA 439
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 149 bits (361), Expect = 2e-34
Identities = 96/349 (27%), Positives = 168/349 (48%), Gaps = 17/349 (4%)
Query: 126 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRE 185
GD V+ + + VG+ + GRV+DA G PIDGK D R+ AP + R + E
Sbjct: 93 GDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGKPLSDDLVRVSASRAAPDSLDRPPIDE 152
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P+QTG++A+D+++ G GQR I GK+ L +G + +
Sbjct: 153 PLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTLL-------GMLTRGTTADR---IVIA 202
Query: 246 AIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHA 305
+G++ V + ++R A + +++V AT+ A + A ++ A+ E FRD G
Sbjct: 203 MVGERGREVQEFMQRALGAAGLKRSVVVVATSDKPAAQRLSAAWTATAIAEKFRDEGHRV 262
Query: 306 LIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTAL 365
L++ D +++ A+A R++ L PP YP VF + +L+ERA + + GS+TA
Sbjct: 263 LLLVDSVTRFAMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAGRTTK----GSITAF 318
Query: 366 PVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMK 425
+ + D + I V + DG I L +L ++G P I++ S+SRV + T
Sbjct: 319 YTVLVEGDDNNEPISDTVRGLLDGHIVLNRKLAHRGHYPPIDIPESISRVANHLVTPETY 378
Query: 426 QVAGSMKLELAQYR---EVAAFAQFGSDLDAATQQLLNRGMRLTELLKQ 471
Q ++ + QY+ ++ + + S D + + +LL+Q
Sbjct: 379 QATLGIREHMVQYQTSEDLISIGAYRSGSDPRVDTAIAMRDPINDLLRQ 427
>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 435
Score = 149 bits (360), Expect = 3e-34
Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 17/357 (4%)
Query: 118 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGI 177
G+ ++ GD V G + +PVGE + GRV+D LG P+D +D + V P
Sbjct: 72 GDTTGLRVGDHVVNHGEGLRIPVGEALRGRVLDGLGRPMDDGPALDDLPTVVVDNLPPAA 131
Query: 178 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEK 237
+ R + + + G++A+D+L+ GRGQR I+ GK++L +G D +
Sbjct: 132 LSRPRIDQQLGLGVRAMDALISCGRGQRLGIMAGSGVGKSSLL-------SMIARGTDAE 184
Query: 238 KKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEF 297
+ + IG++ V + ++ + +I+V AT+ + ++ A + + E+
Sbjct: 185 ISVIAL---IGERGREVREFLENDLGPAGLRRSIVVVATSDEPPVVRLRAAFVATRIAEW 241
Query: 298 FRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKM 357
FRD+G+H +++ D L++ A+A R++ L PP +P VF L RLLERA +
Sbjct: 242 FRDSGRHVVLMMDSLTRVALAQREIGLSAGEPPATRGFPPSVFALLPRLLERAGTSPE-- 299
Query: 358 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGS 417
GS+T L + + D+ I + SI DG + L +L G P+I+V S+SRV S
Sbjct: 300 --GSITGLYTVLVEGDDLQDPIGDSARSILDGHVVLSRDLATSGHFPSIDVLESISRVAS 357
Query: 418 AAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL---DAATQQLLNRGMRLTELLKQ 471
A + + ++ LA YR V + G+ + DA L R+ + L+Q
Sbjct: 358 AIIEPSGRADGIRLRRLLAAYRSVRELVEIGAYVAGSDADADDALALMPRINDFLRQ 414
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 146 bits (354), Expect = 1e-33
Identities = 102/333 (30%), Positives = 162/333 (48%), Gaps = 15/333 (4%)
Query: 118 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSR-MRVGIKAPG 176
G K I +G V +G + VGE +LGRV++ LG P+DG GP+ ++ V + P
Sbjct: 77 GELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPVGGRTENYPVDNRPPN 136
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
+ R + E + TG++AVD L+ GRGQR I GK+ L + RF+ +
Sbjct: 137 PLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTL----LGMVSRFSDADVN 192
Query: 237 KKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGE 296
+ IG++ V ++ + +++V AT+ A ++ + CA+ E
Sbjct: 193 ------VIGLIGERGREVLDFIETDLGPEGLARSVVVVATSEQPALVRLKGAFVACAVAE 246
Query: 297 FFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDK 356
+FRD G+ L++ D +++ A+A R++ L + PP + Y VF L RLLERA S
Sbjct: 247 YFRDQGRDVLLMMDSITRFAMAQREVGLAIGEPPATKGYTPSVFALLPRLLERAGMSS-- 304
Query: 357 MGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVG 416
GS+TA + D++ I V I DG I L L PA++V SVSR+
Sbjct: 305 --AGSITAFFTVLVDGDDLNEPISDAVRGILDGHIVLSRSLAASNHFPAVDVLNSVSRLM 362
Query: 417 SAAQTKAMKQVAGSMKLELAQYREVAAFAQFGS 449
T+ + AG ++ LA YR+ G+
Sbjct: 363 PDITTEEHRAWAGRLRDLLAAYRQAEDLINIGA 395
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 145 bits (352), Expect = 2e-33
Identities = 109/364 (29%), Positives = 165/364 (45%), Gaps = 17/364 (4%)
Query: 123 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVS 182
++ G V GA + VPVG+ +LGRV++A G IDGKG I R V + + R+
Sbjct: 80 VEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGEIYAPLRSEVLRASSNPMERLP 139
Query: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 242
+ M TG++ +DSL+ +G GQR I GK+ T++ N D
Sbjct: 140 ITRQMVTGVRVLDSLLAVGCGQRLGIFSGSGVGKS-----TLMGMIARNTDAD-----VS 189
Query: 243 IYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 302
+ IG++ V V + ++IVSAT+ ++ + Y+ A+ E+FRD G
Sbjct: 190 VIALIGERGREVMDFVAHDLGPEGLKRSVIVSATSDESPLARVRGAYTATAIAEYFRDQG 249
Query: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSL 362
K L+++D L++ A A R++ L P Y VF +LLERA S GS+
Sbjct: 250 KQVLLLFDSLTRFAKAQREIGLASGELPATRGYTPGVFETLPKLLERAGSFS----MGSV 305
Query: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422
TA + D+ I V I DG I L L + PAI+V SVSR+
Sbjct: 306 TAFYTVLVDGDDLDEPISDAVRGIVDGHIVLSRALAQRNHYPAIDVLQSVSRLAHRVLGA 365
Query: 423 AMKQVAGSMKLELAQYREVAAFAQFGS---DLDAATQQLLNRGMRLTELLKQGQYVPMAI 479
MK+ ++ LA Y EV + G+ DA + + L L QG +
Sbjct: 366 DMKEAVRIVRRALAVYAEVEDLVRVGAYQQGSDAELDRAIAMRAELERFLTQGAQERVRF 425
Query: 480 EEQV 483
++ V
Sbjct: 426 QDTV 429
>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
bacterium (strain Ellin345)
Length = 437
Score = 144 bits (350), Expect = 4e-33
Identities = 116/422 (27%), Positives = 189/422 (44%), Gaps = 28/422 (6%)
Query: 66 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 125
+E G + S+GD + ++ E+V F +++ L+P K I+
Sbjct: 33 IESEGPLSSLGDSCEVISSKGDVYPGEIVGFRDNAV-LSMTLQPP----------KGIRF 81
Query: 126 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRE 185
GD V + VG++ILGRV+DA G P+DG P + V AP R+ VRE
Sbjct: 82 GDSVVGLAQPPSIAVGDEILGRVLDATGAPLDGITPARPRGSRPVDGSAPLPYARIPVRE 141
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
M GI+A+D V GRGQR I G GK+ T+I D +
Sbjct: 142 VMPCGIRAIDGFVTCGRGQRIGIFGGSGVGKS-----TLIGMLTRGSAAD-----VTVLA 191
Query: 246 AIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHA 305
IG++ V + V+ + +++ +T+ + L+ A + A+ E F GKH
Sbjct: 192 LIGERGREVREFVEESIGEEGMQRAVVIVSTSDQSPLLRLRAAMAATAVAEHFAAEGKHV 251
Query: 306 LIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTAL 365
L++ D L++ +A R++ L PP + Y VF L +RL+ERA GS+T
Sbjct: 252 LLVLDSLTRFGMAQREIGLAAGEPPTAKGYTPSVFTLLARLVERAGNFE----RGSITGF 307
Query: 366 PVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMK 425
+ + D+ + V S+ DG I L+ +L G P I + S+SR+ SA +
Sbjct: 308 YTVLMEGDDLQDPLVDAVRSLLDGHIVLDRKLASDGHYPPIQILESLSRLASAVCSVQHL 367
Query: 426 QVAGSMKLELAQY---REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQ 482
Q + ++ LA Y ++ + D Q ++ + +LL QG ++EE
Sbjct: 368 QASRKLRAWLASYVRSEDLIRIGAYQRGGDPVLDQAVSAMPEIRKLLIQGALERTSLEEI 427
Query: 483 VA 484
V+
Sbjct: 428 VS 429
>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 443
Score = 142 bits (343), Expect = 3e-32
Identities = 94/301 (31%), Positives = 148/301 (49%), Gaps = 12/301 (3%)
Query: 114 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 173
V+ F +K + G V+ GA VPVG+ +LGR++DA GNP+DG+ I ++ + + +
Sbjct: 74 VLPFDTNKPLVTGAPVEPHGASSMVPVGKALLGRIMDAQGNPLDGRPAIKSQFQWPLAGR 133
Query: 174 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 233
+ R V + G++A++ L+ +G GQR II GK+ L I +
Sbjct: 134 KVNPLRRGRVTRALNMGVRAINGLLTVGEGQRVAIIAGSGVGKSVLMGQMIAGTECD--- 190
Query: 234 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCA 293
+ IG++ V+ V+ +++V+ A L+ A A
Sbjct: 191 -------VIVVGLIGERSREVSDFVETKLPPDVRKKSVVVAVPADHPPLLRLRAAMRATA 243
Query: 294 MGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM 353
+ E FR GK L++ D L++ A A R++ L L PP + YP VF L L ERA
Sbjct: 244 IAEAFRAEGKKVLLLIDSLTRVAHAQREIGLTLGEPPTMKGYPPSVFALIPSLCERAG-- 301
Query: 354 SDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVS 413
DK GGS+TAL + GD+ + + +I DG I L +L +G+ PAI+V S+S
Sbjct: 302 IDKATGGSVTALYTVLADGGDIDDPVVDSARAIVDGHIILSRQLAEQGVYPAIDVARSLS 361
Query: 414 R 414
R
Sbjct: 362 R 362
>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
Erythrobacter sp. NAP1
Length = 450
Score = 140 bits (340), Expect = 7e-32
Identities = 111/379 (29%), Positives = 179/379 (47%), Gaps = 19/379 (5%)
Query: 56 RILGAAPKADLEETGRVLSIGDGIARVYGLK-NIQAEEMVEFSSGLKGMA--LNLEPDNV 112
R GAA + +GRV++ G+ V GL I + +E SG + +A + +
Sbjct: 11 RFRGAAIERGPVPSGRVVACDGGLIEVSGLSVPIGSLGAIESDSGDEPLAEVIGFRRGHS 70
Query: 113 GVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGI 172
+++ G+ +L++ V+ G+ V VG+ +LGR VD LG PIDG I +
Sbjct: 71 LMMLLGDAQLLQPRASVRAIGSPGSVRVGDALLGRAVDGLGQPIDGGPAIHASETWPLLG 130
Query: 173 KAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 232
K + R V E G++AV++L +G GQR II GK+ L IDT+
Sbjct: 131 KRESALARSGVSESFDCGVRAVNALATMGVGQRMGIIAGSGVGKSVL-IDTV-------- 181
Query: 233 GEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGC 292
+ K L + IG++ V+ V R ++V+ A A L+ A
Sbjct: 182 AANAKADL-AVIALIGERAREVSDFVTRHMSGAERGRMVVVAVPADHAPNLRLRAAQYAS 240
Query: 293 AMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 352
A+ E FR G+ L++ D L++ A A R+++L+L P YP +RL+ERA
Sbjct: 241 AIAEHFRAKGRKVLLVLDSLTRVAHAARELALVLGEPGAARGYPPSALSTITRLVERAGN 300
Query: 353 MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV 412
+ GG++T + + D S + +I DG + L EL +G PAI++ S+
Sbjct: 301 CA--TSGGAVTGIYSVLADGDDTSDPVVDTARAILDGHLVLSRELAQRGHYPAIDIPASL 358
Query: 413 SRV----GSAAQTKAMKQV 427
SRV SA Q +A +++
Sbjct: 359 SRVMHDIASAEQLEAARRL 377
>UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep:
SctN - Lysobacter enzymogenes
Length = 450
Score = 136 bits (329), Expect = 1e-30
Identities = 100/343 (29%), Positives = 164/343 (47%), Gaps = 17/343 (4%)
Query: 132 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 191
TG V GE +LGR++DA G+ IDG+G +M + +P + R + P TG+
Sbjct: 102 TGRQASVRCGEGLLGRILDANGDAIDGRGGFGPTVQMPIYAASPNPLARQLIDRPFATGV 161
Query: 192 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKR 251
+A+D+++ G GQR I GK+ L +G D + + +G++
Sbjct: 162 RALDTVITAGVGQRLGIFAVAGGGKSTLL-------GMLARGGDADVNVIAL---VGERG 211
Query: 252 STVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDD 311
V + + + +IIV AT+ A + A + A+ E+FRD GK +++ D
Sbjct: 212 REVNEFIHDNLGEEGLKKSIIVVATSDRPALERSRAAWVATAIAEYFRDRGKRVMLLVDS 271
Query: 312 LSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQ 371
+++ A A R + L + PP R +P VF RL ERA +DK GS+TA + +
Sbjct: 272 VTRFARALRDVGLAIGEPPARRGFPPSVFSQMPRLFERAGN-NDK---GSITAFYTVLME 327
Query: 372 AGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSM 431
D + V SI DG I L +L PAI+V +S+SR +A ++ AG +
Sbjct: 328 GEDGDDPVAEEVRSILDGHIVLSRKLAAAYHYPAIDVLVSLSRTMPRVADEAHQRAAGQL 387
Query: 432 KLELAQYREVAAFAQFGS---DLDAATQQLLNRGMRLTELLKQ 471
+ LA+++++ Q G DA + + + +LLKQ
Sbjct: 388 RKYLAKHQDIELLLQLGEYKRGSDADADIAIEKIEPIRKLLKQ 430
>UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase
protein; n=2; Proteobacteria|Rep: Type III secretion
system ATP synthase protein - Rhizobium etli (strain CFN
42 / ATCC 51251)
Length = 439
Score = 135 bits (327), Expect = 2e-30
Identities = 112/420 (26%), Positives = 193/420 (45%), Gaps = 26/420 (6%)
Query: 68 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSS---GLKGMA--LNLEPDNVGVVVFGNDKL 122
++GRV S+ + R + +++ E+ E G G+A + ++ + + + G +
Sbjct: 20 QSGRVTSVSGLLVRAL-IPSVRIGELCELHEPGRGRIGLADVVGIDGETALLSLHGETRG 78
Query: 123 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI-DGKGPIDTKSRMRVGIKAPGIIP-- 179
I + + TG + VG +LG VVDA GN + P +R + + P
Sbjct: 79 ISQRTEIVPTGREPAISVGNFLLGAVVDAHGNVLRPSANPAGDDARFLQPLYGQPVNPLS 138
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
R +R+P +GI A+D L+ G+GQR I G GK+ L + N NK +
Sbjct: 139 RRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVAN----NKAD----- 189
Query: 240 LYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR 299
+ +G++ V + V G + +V AT+ A ++ A + A+ E+FR
Sbjct: 190 -VIVCALVGERGREVGEFVADNMPEGVASNVALVLATSDRPALERFKAVMTATAIAEYFR 248
Query: 300 DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGG 359
+ GKH L++ D +++ A A R++ L PP R +P VF + ++ ERA ++
Sbjct: 249 EQGKHVLLVIDSVTRMARALREVGLAAGEPPVRRGFPPSVFAVLPQIFERAGNSAN---- 304
Query: 360 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA 419
G++TA + + + I S+ DG I L ++ G PAI+V S SR SA
Sbjct: 305 GTMTAFYTVLVEGEEQDDPIAEETRSLLDGHIVLSDKIARAGNFPAIDVLASRSRTMSAV 364
Query: 420 QTKAMKQVAGSMKLELAQYREVAAFAQFG---SDLDAATQQLLNRGMRLTELLKQGQYVP 476
+++ +Q A ++ LA Y EV + G DAA + + + + L GQ P
Sbjct: 365 VSESHRQAADRLRALLALYDEVELLIRVGEYRQGRDAAVDEAVAKHGLIQRFLFDGQGKP 424
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 135 bits (327), Expect = 2e-30
Identities = 99/364 (27%), Positives = 173/364 (47%), Gaps = 18/364 (4%)
Query: 110 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMR 169
D + ++ G ++ G V TG + PVG +LGRV+D LGNPID KGP+
Sbjct: 62 DRLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPIDDKGPLMGCGFRP 121
Query: 170 VGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQR 229
+ AP + R + P+ G++A+D+L+ +G GQR I GK+ T++
Sbjct: 122 ILGPAPDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGSGVGKS-----TLLGMVA 176
Query: 230 FNKGEDEKKKLYCIYVA-IGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAP 288
D C +A +G++ V + +++ + +++V AT+ + ++ A
Sbjct: 177 RATAAD------CNVIALVGERGREVREFIEKDLGEEGLRRSVVVVATSEQPSLVRIRAA 230
Query: 289 YSGCAMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 347
A+ E+FRD +G +++ D +++ A A R++ L + PP Y VF + R+L
Sbjct: 231 LMATAIAEYFRDAHGLDVILMMDSVTRLAHAQREVGLAVGEPPATRGYTPSVFAMLPRVL 290
Query: 348 ERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
ER S GS+T + + D++ + V SI DG + L +L G PAI+
Sbjct: 291 ER----SGTGPAGSVTGVYTVLVDGDDMNEPVADAVRSILDGHVVLSRKLANAGHYPAID 346
Query: 408 VGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTE 467
SVSRV T ++ A ++ L+ Y+E Q G+ T L++ + +
Sbjct: 347 PLQSVSRVMPDVTTPEHRKQAQRLRALLSAYQEAEDLIQIGA-YQQGTNPLVDEALAKMD 405
Query: 468 LLKQ 471
+K+
Sbjct: 406 QIKR 409
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 135 bits (326), Expect = 3e-30
Identities = 100/339 (29%), Positives = 162/339 (47%), Gaps = 18/339 (5%)
Query: 138 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 197
VPVGE +LGRV+D G P+DG+ D + + P ++ R + +P+ TGI+A+DS+
Sbjct: 91 VPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAMPPPAMV-RQPITQPLMTGIRAIDSV 149
Query: 198 VPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQI 257
G GQR I GK+ L + + N + + V IG++ V +
Sbjct: 150 ATCGEGQRVGIFSAPGVGKSTL-LAMLCNAPDADSN---------VLVLIGERGREVREF 199
Query: 258 VKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAV 317
+ +IV AT+ A + A + + EFFRDNGK +++ D L++ A
Sbjct: 200 IDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRYAR 259
Query: 318 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSA 377
A R+++L YP VF RLLER M +K GS+TA + + D++
Sbjct: 260 AAREIALAAGETAVSGEYPPGVFSALPRLLERTG-MGEK---GSITAFYTVLVEGDDMNE 315
Query: 378 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQ 437
+ V S+ DG I L L +G PAI+V ++SRV + +Q+A ++ LA
Sbjct: 316 PLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLAL 375
Query: 438 YREVAAFAQFGS---DLDAATQQLLNRGMRLTELLKQGQ 473
Y+EV + G +D T + ++ + L+Q +
Sbjct: 376 YQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSK 414
>UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI;
n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI
- Geobacter sulfurreducens
Length = 441
Score = 134 bits (323), Expect = 8e-30
Identities = 94/359 (26%), Positives = 171/359 (47%), Gaps = 19/359 (5%)
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 188
VKR A + VG +LGRV+D LG PID KGP+ + + + R +R+P+
Sbjct: 87 VKRKKA--SLGVGPGLLGRVIDGLGVPIDDKGPLAIREEYPIYANPVNPMKRRPIRQPLD 144
Query: 189 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIG 248
GI+A+++L+ G GQR I+ GK+ L + I R+ + + + IG
Sbjct: 145 LGIRAINALLTCGEGQRVGIMAGSGVGKSTL-LGMI---ARYTEADVN------VIALIG 194
Query: 249 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALII 308
++ + + +++ + +++V AT+ ++ Y + E+F+ GK L++
Sbjct: 195 ERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQGKKVLLM 254
Query: 309 YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVI 368
D ++ A+A R++ L + PP + Y VF +LLER D GS+T L +
Sbjct: 255 MDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGSFLD----GSITGLYTV 310
Query: 369 ETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVA 428
+ D + I + SI DG I L EL + I P +++ S SRV + ++ +Q A
Sbjct: 311 LVEGDDFNEPISDAMRSILDGHIVLNRELAARAIYPPLDILASASRVMNDVTERSQQQFA 370
Query: 429 GSMKLELAQYREVAAFAQFGSDLDAATQQL---LNRGMRLTELLKQGQYVPMAIEEQVA 484
K LA YR+ G+ + + + + + ++QG + +++E+ +A
Sbjct: 371 SRFKELLAAYRQAEDLINIGAYKPGSNPTIDYAIAKMDGMINFIRQGIHDGVSMEQSIA 429
>UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=3; Proteobacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Burkholderia dolosa AUO158
Length = 476
Score = 134 bits (323), Expect = 8e-30
Identities = 114/426 (26%), Positives = 191/426 (44%), Gaps = 25/426 (5%)
Query: 68 ETGRVLSIGDGIARVYGLK-NIQAEEMVEFSSG--LKGMALNLEPDNVGVVVFGNDKLIK 124
+ GR++ + + + G A +E +SG + + D ++ F +
Sbjct: 60 QVGRLIGVSGILLQATGYPFETGANARIETASGEWIDARVVGFRDDVTQLMPFRAPAGLF 119
Query: 125 EGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVS 182
G V GA + +G GR+VD +G P DG GP+ + + ++ P I P +
Sbjct: 120 AGARVMPAGAGRQLTIGAAWRGRIVDGMGEPFDGGGPLTGDAPL--DLRPPRINPMKKRP 177
Query: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 242
V + G++A++ ++ IGRGQR + GK+ L + I Q +
Sbjct: 178 VAGVLDVGVRAINGMLTIGRGQRVGLFAGSGVGKSVL-LGMITRQTAAD---------VV 227
Query: 243 IYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGC-AMGEFFRDN 301
+ IG++ V + V+ + I+V A A D +PL L C A+ FRD
Sbjct: 228 VVGLIGERGREVREFVEHALGPDGMRKAIVVVAPA-DESPLMRLMATELCHAIAAHFRDR 286
Query: 302 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 361
G + L++ D L++ A+A R+++L L PP + YP VF + L+ERA + G GS
Sbjct: 287 GDNVLLLVDSLTRYAMAQRELALALGEPPATKGYPPSVFGMLPALVERA---GNGEGSGS 343
Query: 362 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 421
++A+ + + D + +I DG I L EL +G PAI+V SVSR S +
Sbjct: 344 MSAIYTVLAEGDDEQDPVVDTARAILDGHIMLSRELAAQGHYPAIDVTRSVSRCMSLVAS 403
Query: 422 KAMKQVAGSMKLELA---QYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMA 478
A A +K L+ Q R++ + + D AT + + R+ L Q Q
Sbjct: 404 SAQCAAASELKDLLSRHVQVRDLIPLGGYVAGADPATDRAVELHPRIAAFLSQAQGDAAP 463
Query: 479 IEEQVA 484
++ VA
Sbjct: 464 YDDTVA 469
>UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1;
Hahella chejuensis KCTC 2396|Rep: Flagellum-specific ATP
synthase - Hahella chejuensis (strain KCTC 2396)
Length = 416
Score = 133 bits (321), Expect = 1e-29
Identities = 97/340 (28%), Positives = 169/340 (49%), Gaps = 22/340 (6%)
Query: 123 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAP-GIIPRV 181
I G V TG V V + +LG+VV+A G P+DG G + + + + P + R
Sbjct: 56 IHVGSEVVATGLPASVTVNDGMLGKVVNAFGTPLDG-GVLSSPGKSYPLYREPINPMERA 114
Query: 182 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 241
EP+ G++ +D+ + +GQR I GK+ L + I Q D + +
Sbjct: 115 PCDEPLNLGVRVIDAFCAMAKGQRVGIFAGSGVGKSTL-LGMIAKQC------DAEVNVI 167
Query: 242 CIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDN 301
+ IG++ V++ ++ + + +++V+ATA + A ++ A + A+ E+F+D
Sbjct: 168 AL---IGERGREVSEFIQDNLGSDGLKKSVVVAATADEPALVRVHAAFVATAIAEYFKDK 224
Query: 302 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 361
GKH ++ D +++ A A R++ L + PP Y F L RL ERA GGS
Sbjct: 225 GKHVMLYMDSITRLATAQREIGLAIGEPPTSRGYTPSTFSLLPRLTERAGIFK---SGGS 281
Query: 362 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVS----RVGS 417
++AL + + D + + V SI DG I L+ +L ++GI PAI++ S+S RV
Sbjct: 282 ISALYTVLVEGDDFNEPVSDTVRSILDGHIMLKRQLAHQGIFPAIDIRESMSRLFPRVTG 341
Query: 418 AAQTKAMKQV--AGSMKLELAQYREVAAFAQFGS-DLDAA 454
Q A++++ S+ E + E+ A+ Q G ++D A
Sbjct: 342 KEQQMAVRELIRLESLYQESKELIELGAYKQGGDPEIDQA 381
>UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3;
Borrelia burgdorferi group|Rep: Flagellum-specific ATP
synthase - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 436
Score = 133 bits (321), Expect = 1e-29
Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 13/292 (4%)
Query: 123 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVS 182
I+ G+ V +++ + +++LGRV+D+LG PID KG S + + I R
Sbjct: 78 IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSI 137
Query: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 242
+ + TG+K +D +P+ +GQR I GK+ T++ N D
Sbjct: 138 FEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKS-----TLLGMIAKNSNADVN----- 187
Query: 243 IYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 302
+ IG++ + + ++ + +++V +T+ ++ +Y Y + E+FR+ G
Sbjct: 188 VIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQG 247
Query: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSL 362
K +++D +++ A A R+MSL L PP + YP VF LLER+ + GGS+
Sbjct: 248 KDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFNGN---GGSV 304
Query: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR 414
T + + D + + N+ ++ DG I L+ +LF +GI P+INV S SR
Sbjct: 305 TGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSR 356
>UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific
ATP synthase - Mariprofundus ferrooxydans PV-1
Length = 471
Score = 132 bits (318), Expect = 3e-29
Identities = 86/344 (25%), Positives = 166/344 (48%), Gaps = 13/344 (3%)
Query: 118 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGI 177
G+ + I GD ++ + VG +LGRV+DA GNP+D + + +
Sbjct: 80 GSTRGIAPGDPIEPLSTTPSIRVGPHLLGRVLDAQGNPMDEYALSNLGTLFPLHGTRLNP 139
Query: 178 IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEK 237
R ++ PMQ G++A+D+ +P+G GQR + GK+ T++ N +
Sbjct: 140 FTRHTIDAPMQLGVRAIDACMPMGWGQRMGLFAGAGVGKS-----TLLGMLARNSDAEVN 194
Query: 238 KKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEF 297
+ +G++ V + + + + A+ +++++ AT+ L+ A + + E
Sbjct: 195 -----VIALVGERSREVREFLDQALGSEALQHSVVIVATSDMPPVLRVRAAHMATTIAEA 249
Query: 298 FRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKM 357
FR+ GK L++ D L++ A A R++ L+L PP + Y F + + LLER+ + +
Sbjct: 250 FREQGKRVLLLMDSLTRVAQAQREIGLMLGEPPASKGYTPSCFSILAELLERSGPGTAQ- 308
Query: 358 GGGSLTALPVIETQAGDVSA-YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVG 416
GG ++A + + D+ A I + +S+ DG I L+ +L +G PAINV S+SR+
Sbjct: 309 -GGDISAFYTVLVEGDDMRADPIADSAMSVLDGHILLDRKLAEQGHFPAINVLRSISRLD 367
Query: 417 SAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLN 460
+ Q A ++ +++ + + G+ + +L N
Sbjct: 368 TQLMNNEQMQAARMLRRKMSIFERMEDMISIGAYEQGSNPELDN 411
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 132 bits (318), Expect = 3e-29
Identities = 100/422 (23%), Positives = 200/422 (47%), Gaps = 20/422 (4%)
Query: 68 ETGRVLSIGDGIARVYGLKN-IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEG 126
ETG+++ + V GL++ I + +++ ++ + D + ++ G+ + ++ G
Sbjct: 33 ETGQLVHLSGMRLEVAGLRSPIGSRCLIQGKVPVEAEVIGFHGDRLVMMCEGSAEGLRPG 92
Query: 127 DIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREP 186
V+ +PVG +LGRV+D G P+DG P + + + + + R ++++P
Sbjct: 93 ARVEPLEGSDRIPVGPGLLGRVIDGAGRPLDGFSPPTSDITVPMQGEPLNPMDRGALQKP 152
Query: 187 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVA 246
+ GI+A++SL+ + RGQR + GK+ L + RF + + +
Sbjct: 153 LDVGIRAINSLLTVARGQRIGLFAGSGVGKSTL----LGMMTRFTEAD------VVVVGL 202
Query: 247 IGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAP-YSGCAMGEFFRDNGKHA 305
+G++ V + V+ + ++V AT +D +PL +A + A+ E++R G +
Sbjct: 203 VGERGREVREFVEDSLGPEGLKKAVVV-ATPADTSPLMRVAGCWRATAIAEYYRAQGLNV 261
Query: 306 LIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTAL 365
L++ D L++ A A R++ L PP Y VF L L+ERA +G GS+TA+
Sbjct: 262 LLLVDSLTRFAQAQREIGLAAGEPPVSRGYTPSVFSLMPNLIERAG----NLGSGSITAV 317
Query: 366 PVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMK 425
+ T+ D+ I + +I DG + L ++ G+ PAI++ S+SR A +
Sbjct: 318 YTVLTEGDDLQDPIADSARAILDGHVVLSRKMADSGLFPAIDIEASISRAMLQITDDAQQ 377
Query: 426 QVAGSMKLELAQY---REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQ 482
A ++ A Y R++ A + + D + + +L++Q P + +
Sbjct: 378 AHARKVRDVYATYQANRDLIAMGAYRAGTDPQIDLAIRHHNAVHQLIEQPLDQPASFDSS 437
Query: 483 VA 484
++
Sbjct: 438 LS 439
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 131 bits (317), Expect = 4e-29
Identities = 117/438 (26%), Positives = 201/438 (45%), Gaps = 32/438 (7%)
Query: 64 ADLEETGRVLSIGDGIARVYGLKNIQAEEMV----EFSSGLKGMALNLEPDNVGVVVFGN 119
A +E+ GRV+++ GI L + ++ + S + + PDN + G
Sbjct: 27 APVEKKGRVMAVS-GILLECSLPQARIGDLCWVARQDDSQMMAEIVGFSPDNTFLSALGA 85
Query: 120 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG------PIDTKSRMRVGI- 172
I +G V + V E++LG V+D G ++ G P R + +
Sbjct: 86 LDGIAQGATVTPLYQPHRIQVSERLLGSVLDGFGRALEDGGESAFVEPGQVTGRTQPVLG 145
Query: 173 KAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 232
AP R + +P+ TG++AVD L+ IG+GQR I GKT T++ + N
Sbjct: 146 DAPPPTSRPRISQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKT-----TLLAELARNT 200
Query: 233 GEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGC 292
D ++ IG++ + + + D + T++V +T+ ++ + A ++
Sbjct: 201 PCDT-----IVFGLIGERGRELREFLDHELDDELRSRTVLVCSTSDRSSMERARAAFTAT 255
Query: 293 AMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 352
A+ E +R G+ L+I D L++ A A R++ L L P GR P V+ L RL+ERA +
Sbjct: 256 AIAEAYRAEGRQVLLILDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAGQ 315
Query: 353 MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV 412
D G++TAL + + ++ + V S+ DG I L L +G PAI+V S+
Sbjct: 316 TED----GAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLARRLAEQGHYPAIDVLASL 371
Query: 413 SRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGS---DLDAATQQLLNRGMRLTELL 469
SR S + AG ++ +A Y++V + G D T +N +T+ L
Sbjct: 372 SRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEYQPGHDELTDSAVNAHSEITQFL 431
Query: 470 KQGQYVPM---AIEEQVA 484
+Q PM I++Q+A
Sbjct: 432 RQSMREPMPYGVIQQQLA 449
>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
Leptospira|Rep: Flagellum-specific ATP synthase fliI -
Leptospira interrogans
Length = 454
Score = 129 bits (311), Expect = 2e-28
Identities = 93/344 (27%), Positives = 168/344 (48%), Gaps = 18/344 (5%)
Query: 132 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 191
+G + +PVG+++LGRV++ +G PID KG I TK + P + R +R+ + TG+
Sbjct: 97 SGRKLAIPVGKELLGRVLNGVGRPIDKKGHIITKEERPPDNEVPNPLDRPIIRDVLMTGV 156
Query: 192 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKR 251
+A+D ++ IGRGQR I GK++L + I R+ + + +G++
Sbjct: 157 RAIDGILTIGRGQRVGIFSGSGVGKSSL-LGMIA---RYTDADIN------VIALVGERG 206
Query: 252 STVAQIVKRLTDAGAINYTIIVSATASDAAPLQYL-APYSGCAMGEFFRDNGKHALIIYD 310
V + ++ + +++++AT SDA ++ + ++ E+FRD GKH ++ D
Sbjct: 207 REVNEFIEIDLGKEGLKKSVVLAAT-SDAPKMEQVNCALLATSIAEYFRDQGKHVNLMMD 265
Query: 311 DLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIET 370
L++ A A R++S PP + VF ++L+ER+ GG++T + T
Sbjct: 266 SLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERS---GTSKSGGTITGFYTVLT 322
Query: 371 QAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGS 430
+A ++ I V DG I L +L K PAI+V S+SRV + + AG
Sbjct: 323 EADEMEDPIADAVRGYIDGHIILNRKLAEKNHYPAIDVPASLSRVMARIAPEDQNLRAGM 382
Query: 431 MKLELAQY---REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQ 471
++ ++ Y E+ + S D + + ++ LKQ
Sbjct: 383 IRELISVYNSAEELIRLNAYVSGSDPKVDLAIRKKDKIDRYLKQ 426
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 128 bits (310), Expect = 3e-28
Identities = 103/358 (28%), Positives = 162/358 (45%), Gaps = 17/358 (4%)
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQ 188
V TG + +VP+G +LGRV+D+ P+DGKG + T + +AP + R V P
Sbjct: 100 VVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKTTEVRPLHGRAPNPMTRRMVERPFP 159
Query: 189 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIG 248
G++A+D L+ G GQR I G+ GK+ T+I+Q D I IG
Sbjct: 160 LGVRALDGLLTCGEGQRIGIYGEPGGGKS-----TLISQIVKGAAAD-----VVIVALIG 209
Query: 249 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALII 308
++ V + V+R + I+V T+ +A + A+ E+FR+ G ++
Sbjct: 210 ERGREVREFVERHLGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFREQGLRVALL 269
Query: 309 YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVI 368
D L++ A R++ L PP R +P VF LLERA + ++ GS+TA +
Sbjct: 270 LDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLERAG-LGER---GSITAFYTV 325
Query: 369 ETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVA 428
+ I I DG I L L + PAI+V S SRV A ++ ++ A
Sbjct: 326 LVEGDGTGDPIAEESRGILDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSETHRKAA 385
Query: 429 GSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQV 483
+ LA+Y E + ++ D T + + L E L+Q + EE V
Sbjct: 386 SFFRDLLARYAECEFLINVGEYKQGGDPLTDRAVASIGELKEFLRQSEDEVSDFEETV 443
>UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Rhizobium meliloti (Sinorhizobium meliloti)
Length = 467
Score = 128 bits (310), Expect = 3e-28
Identities = 109/411 (26%), Positives = 187/411 (45%), Gaps = 26/411 (6%)
Query: 60 AAPKADLEETGRVLSIGDGIARVYGL-KNIQAEEMVEFSSGLK---GMALNLEPDNVGVV 115
A P + G V +I G V GL ++++ + V S G + +EP+ V V
Sbjct: 26 ANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGEVVRVEPERVVVC 85
Query: 116 VFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI-DTKSRMRVGIKA 174
I D+V R GA P + GR ++AL PIDG G + R + A
Sbjct: 86 PIEPGDPIGIHDVVIRKGAFRIAPT-DNWCGRTINALAEPIDGLGALLQGDIRRSIANTA 144
Query: 175 PGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 234
P + R V + +TG++A+D P+ GQR I GK+ L + + F+K
Sbjct: 145 PPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTL-LSMLARADAFDK-- 201
Query: 235 DEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAM 294
+ +G++ V + ++ T ++ ++ V AT+ ++ L+ +AP + +
Sbjct: 202 -------VVIALVGERGREVREFIED-TLGDNLSKSVAVVATSDESPMLRKMAPLTAVTI 253
Query: 295 GEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMS 354
E +RD G + L+I D +++ A A R+++ PP YP VF RLLERA +
Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313
Query: 355 DKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR 414
+ G G++TA+ I + + + + I DG I L+ L +G P +N S+SR
Sbjct: 314 E--GAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISR 371
Query: 415 VGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG-------SDLDAATQQL 458
+ A T +++ +K + ++ E G +DLD A +Q+
Sbjct: 372 LARKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQV 422
>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
Epsilonproteobacteria|Rep: Flagellum-specific ATP
synthase - Helicobacter pylori (Campylobacter pylori)
Length = 434
Score = 128 bits (310), Expect = 3e-28
Identities = 104/381 (27%), Positives = 178/381 (46%), Gaps = 19/381 (4%)
Query: 94 VEFSSGLK--GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDA 151
+E S G + GM + E + G F + + GD V ++ PVG +LGRV++
Sbjct: 46 IEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNP 105
Query: 152 LGNPIDGKGPIDTKSRMRVGIKAP-GIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIG 210
LG ID KG +D + R+ I P + R + E G+K++D L+ G+GQ+ I
Sbjct: 106 LGQVIDNKGALDYE-RLAPVITTPIAPLKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFA 164
Query: 211 DRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYT 270
GK+ L +G K+ + IG++ + + +++ G ++
Sbjct: 165 GSGVGKSTL-------MGMITRGCLAPIKVIAL---IGERGREIPEFIEKNLK-GDLSSC 213
Query: 271 IIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 330
++V AT+ D+ ++ + ++ E+F++ G L I D +++ A+A R++ L L PP
Sbjct: 214 VLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPP 273
Query: 331 GREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 390
+ YP L +L+ERA K +K GS+TA + + D+S I SI DG
Sbjct: 274 TSKGYPPSALSLLPQLMERAGKEENK---GSITAFFSVLVEGDDLSDPIADQTRSILDGH 330
Query: 391 IFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSD 450
I L EL GI P IN+ S SRV +++ A + A +E + GS
Sbjct: 331 IVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGS- 389
Query: 451 LDAATQQLLNRGMRLTELLKQ 471
+ L+ ++ L++Q
Sbjct: 390 YQMGNDKELDEAIKKKALMEQ 410
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 126 bits (305), Expect = 1e-27
Identities = 91/338 (26%), Positives = 163/338 (48%), Gaps = 15/338 (4%)
Query: 105 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK--GPI 162
+++ V ++ F + I GD + +G + +P+G +LG VVDA G P+D + G +
Sbjct: 57 ISISETQVKLMPFQSASGISFGDKLIGSGTSIRLPMGSGMLGHVVDAFGQPLDEQELGVV 116
Query: 163 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 222
T+ P + R ++ EP+ T IKA+DS +PIG+GQR I+ GK+ L
Sbjct: 117 QTQCVFLASHINP--LTRAAIDEPLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTLLA- 173
Query: 223 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAP 282
++ + V +G++ V + V + ++V+ATA +
Sbjct: 174 -------MMSDSCAQQNAVIVIVLVGERGREVEEFVNGKMFKRLRSRAVLVAATAEEMPV 226
Query: 283 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 342
+ LA G A+ E GK + + D L++ A+A R++ L + PP + Y VF L
Sbjct: 227 TRVLAVKYGLALAESLSAEGKEVIFVVDSLTRVAMAQREIGLAIGEPPTAKGYTPSVFSL 286
Query: 343 HSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGI 402
R++ER + S+TAL + + D I + ++ DG I L+ L +G
Sbjct: 287 LQRIVERCGAFRHR---ASITALFSVLVETDDFDDPIVDTLRAVLDGHIVLDRALAEQGH 343
Query: 403 RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYRE 440
PAI+V SVSR+ + +++ + ++ L++Y++
Sbjct: 344 FPAIDVLRSVSRLTTNLFDAKKIKLSRAGRILLSEYKQ 381
>UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;
cellular organisms|Rep: Flagellum-specific ATP synthase
- Salmonella typhimurium
Length = 456
Score = 126 bits (305), Expect = 1e-27
Identities = 92/340 (27%), Positives = 163/340 (47%), Gaps = 19/340 (5%)
Query: 138 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 197
+P+G +LGRV+D G P+DG DT + + R + + TG++A+++L
Sbjct: 110 LPLGPALLGRVLDGGGKPLDGLPAPDTLETGALITPPFNPLQRTPIEHVLDTGVRAINAL 169
Query: 198 VPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQI 257
+ +GRGQR + GK+ L + R+ + + + IG++ V
Sbjct: 170 LTVGRGQRMGLFAGSGVGKSVL----LGMMARYTRAD------VIVVGLIGERGREVKDF 219
Query: 258 VKRLTDAGAINYTIIVSATASDAAPLQYL--APYSGCAMGEFFRDNGKHALIIYDDLSKQ 315
++ + +++++A A D +PL + A Y+ + E FRD G+H L+I D L++
Sbjct: 220 IENILGPDGRARSVVIAAPA-DVSPLLRMQGAAYA-TRIAEDFRDRGQHVLLIMDSLTRY 277
Query: 316 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDV 375
A+A R+++L + PP + YP VF L+ERA + GGGS+TA + T+ D
Sbjct: 278 AMAQREIALAIGEPPATKGYPPSVFAKLPALVERAG--NGIHGGGSITAFYTVLTEGDDQ 335
Query: 376 SAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK---AMKQVAGSMK 432
I + +I DG I L L G PAI++ S+SR +A T+ A ++ +
Sbjct: 336 QDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLL 395
Query: 433 LELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQG 472
+ R++ + + D + + +L L+QG
Sbjct: 396 SSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQG 435
>UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1;
Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 -
Caenorhabditis elegans
Length = 146
Score = 126 bits (303), Expect = 2e-27
Identities = 60/76 (78%), Positives = 68/76 (89%)
Query: 47 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 106
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 107 LEPDNVGVVVFGNDKL 122
L+ DNVGVVVFGNDK+
Sbjct: 94 LDVDNVGVVVFGNDKI 109
>UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5;
Archaea|Rep: V-type ATP synthase beta chain -
Pyrobaculum aerophilum
Length = 467
Score = 126 bits (303), Expect = 2e-27
Identities = 111/422 (26%), Positives = 191/422 (45%), Gaps = 26/422 (6%)
Query: 112 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 171
V V+ G L +G V+ G + +PV EQ++GR++D G P D P+ R
Sbjct: 56 VAQVLGGTLGLPAKGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRDHM-PLPPPEDFR-D 113
Query: 172 IKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQR 229
+ + P R EP++TGI A+D L + RGQ+ I +A + +Q
Sbjct: 114 VNGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNLMAAQVV--RQA 171
Query: 230 FNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPY 289
+G +E+ + ++V +G K + GA+ + V ASD + LAP
Sbjct: 172 TVRGSEEEFAV--VFVGVGIKTEEALFFMDEFRKTGALRRAVAVLNLASDPVAERILAPR 229
Query: 290 SGCAMGEFFR-DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 348
G +GE+ G H L++ D++ R++S PGR YPG ++ + + E
Sbjct: 230 VGLTIGEYLAWQLGYHVLVVITDMTNYCEGLRELSSGRGELPGRRGYPGYMYTDLATIYE 289
Query: 349 RAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV 408
RA + + G S+T P++ D++ IP IT+GQ+ L ++ KGI P +V
Sbjct: 290 RAGRARGRRG--SVTQFPILTMPHDDITHPIPDLTGYITEGQLVLSRAMWGKGIYPPFDV 347
Query: 409 GLSVSR-----VGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGM 463
+S+SR +G + K VA ++ ++ E+ A + + ++ R +
Sbjct: 348 IMSLSRLAKDAIGEGKTREDHKDVANTLIAAYSKALEIRNLATLVGERNLGWRE--RRYL 405
Query: 464 RLTE-----LLKQGQYVPMAIEEQVAIIYCGVRGHL--DKLDPSKITAFEKEFTQHIKTS 516
R + +KQG Y + EE + I + V L D+L ++ +K + +HI S
Sbjct: 406 RFADAFEQRFIKQGYYERRSFEETLDIGW-DVLSILPEDELTNARPQITQKFYRRHIFES 464
Query: 517 HQ 518
Q
Sbjct: 465 VQ 466
>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
Proteobacteria|Rep: Probable ATP synthase spaL -
Salmonella typhimurium
Length = 431
Score = 126 bits (303), Expect = 2e-27
Identities = 103/380 (27%), Positives = 174/380 (45%), Gaps = 17/380 (4%)
Query: 101 KGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 160
+ + L+ + + + GN + + ++ TG + VG +LG V+D G ++
Sbjct: 48 RAQVVGLQRERTVLSLIGNAQGLSRDVVLYPTGRALSAWVGYSVLGAVLDPTGKIVERFT 107
Query: 161 P-IDTKSRMRV-GIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTA 218
P + S RV + P RV VREP+ TG++A+D L+ G GQR I GKT
Sbjct: 108 PEVAPISEERVIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTM 167
Query: 219 LAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATAS 278
L I E + ++ I + IG++ V + V L + ++V AT+
Sbjct: 168 LMHMLI---------EQTEADVFVIGL-IGERGREVTEFVDMLRASHKKEKCVLVFATSD 217
Query: 279 DAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGD 338
+ + A + E+FRD GK ++ D +++ A A R ++L P R YP
Sbjct: 218 FPSVDRCNAAQLATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPAS 277
Query: 339 VFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELF 398
VF RLLER S+ GS+TA + ++ + + + + SI DG ++L +L
Sbjct: 278 VFDNLPRLLERPGATSE----GSITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLA 333
Query: 399 YKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQL 458
+G PAI+V SVSRV T + A +++ + + E+ F G +
Sbjct: 334 GQGHYPAIDVLKSVSRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLG-EYRPGENID 392
Query: 459 LNRGMRLTELLKQGQYVPMA 478
+R M++ + LK P+A
Sbjct: 393 NDRAMQMRDSLKAWLCQPVA 412
>UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1;
Oceanicola granulosus HTCC2516|Rep: Flagellum-specific
ATP synthase - Oceanicola granulosus HTCC2516
Length = 438
Score = 125 bits (302), Expect = 3e-27
Identities = 100/379 (26%), Positives = 170/379 (44%), Gaps = 15/379 (3%)
Query: 72 VLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKR 131
+L G+ R G+ Q ++ + G + ++ ++ FG I GD V+
Sbjct: 16 LLLTATGLERAIGIG--QRCRVLGAGGAVLGEVVGVDGAGSHILPFGTWDGIVAGDQVEV 73
Query: 132 TGAIVDVPVGEQILGRVVDALGNPIDGKGPI-DTKSRMRVGIKAPGIIPRVSVREPMQTG 190
+ V + +GRVVD LG P+D GP+ + +S V P R V ++TG
Sbjct: 74 SPQGERVRPCDGWIGRVVDPLGRPLDRAGPLPEGRSPRAVRAGPPPAFDRRRVGARLETG 133
Query: 191 IKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQK 250
I+A D+ P+ RGQR + GK+ T++ N D + IG++
Sbjct: 134 IRAFDAFTPLCRGQRMGVFAGSGVGKS-----TLMAMLARNADVD-----VIVVGLIGER 183
Query: 251 RSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYD 310
V ++ + ++V AT + ++ A ++ A+ E FRD GK L++ D
Sbjct: 184 GREVQDFIQADLGPEGLARAVLVVATGDEPPLMRRQAAWTAMAVAEHFRDRGKQVLLLLD 243
Query: 311 DLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIET 370
+++ A A R++ L PP YP VF RLLERA D G G +TAL +
Sbjct: 244 SITRFATAQREIGLSGGEPPTSRGYPPTVFAELPRLLERAGPGCD--GQGDITALFTVLV 301
Query: 371 QAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGS 430
+ D+ + +V ITDG + L+ + +G PAI++ SVSR+ + +
Sbjct: 302 EGSDMEEPVADSVRGITDGHVILDRRIAERGRYPAIDLQRSVSRMLPDCHGPDEFAILSA 361
Query: 431 MKLELAQYREVAAFAQFGS 449
+ L +Y ++ + G+
Sbjct: 362 ARRALGRYGDMEELVRIGA 380
>UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase,
flagellum-specific; n=17; Rhodobacteraceae|Rep:
H+-transporting two-sector ATPase, flagellum-specific -
Silicibacter pomeroyi
Length = 445
Score = 124 bits (300), Expect = 5e-27
Identities = 103/406 (25%), Positives = 187/406 (46%), Gaps = 21/406 (5%)
Query: 66 LEETGRVLSIGDGIARVYGL-KNIQAEEMVE----FSSGLKGMALNLEPDNVGVVVFGND 120
+ GRV + G+ ++ GL + Q + VE F L G L +E + ++
Sbjct: 19 VRHVGRVTGVAGGVIQIQGLARQAQIGDRVELKRNFGPSLGGEVLQVEGSTINMLPDSAP 78
Query: 121 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG-IIP 179
+ + G+ V I G LGRVVD G P+DG+ P+ S+ R ++AP +
Sbjct: 79 EGVSLGNRVV-LHPIPGFAPGRHWLGRVVDPFGRPLDGR-PLMRGSKARDLMRAPPPAVQ 136
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
R + + M TG+ A+++L+PI RGQR + GK++L + T+ + +
Sbjct: 137 RKPLGQRMATGLAALNTLLPIVRGQRVGLFAGSGVGKSSL-LATLAKSMQADA------- 188
Query: 240 LYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR 299
+ IG++ V + V + + ++IV+AT+ +A ++ ++ + E R
Sbjct: 189 --VVVALIGERGREVNEFVAKALGPEGLARSVIVAATSDQSALVRRRCAWAAMTVAESLR 246
Query: 300 DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGG 359
D G + L + D +++ A A+R++S + P YP V L + L ERA ++K
Sbjct: 247 DEGLNVLYLADSITRFAEAHREISAAMGEAPALRGYPPSVTPLITGLCERAGPGTEKQ-- 304
Query: 360 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA 419
G +T + + D+ + + + DG I L E+ +G PAI++ SVSR A
Sbjct: 305 GDITGVFSVLVAGSDMDEPVADILRGVLDGHIVLNREIAERGRFPAIDISRSVSRSLPDA 364
Query: 420 QTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRL 465
T + G + + Y + + G + A LL++ +R+
Sbjct: 365 ATPEQNALIGEARRLIGAYEQSEVMIKAGLYSEGA-DPLLDQAVRV 409
>UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase;
n=5; cellular organisms|Rep: Sodium-transporting
two-sector ATPase - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 479
Score = 123 bits (297), Expect = 1e-26
Identities = 101/396 (25%), Positives = 180/396 (45%), Gaps = 16/396 (4%)
Query: 102 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 160
G + + V V VF G D L E V+ ++P+ +LGR+ D +G P D +
Sbjct: 43 GQVIFTSGEVVLVQVFEGTDDLDLERTWVRFLEEPFEIPLSPDVLGRIFDGVGAPRDDRP 102
Query: 161 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 220
P+ + V + R +E +QTGI A+D L + RGQ+ I LA
Sbjct: 103 PMIAPLKRNVNGAPVNPVARAYPQEFIQTGIAAIDGLNSLVRGQKLPIFSGSGLPHNRLA 162
Query: 221 IDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDA 280
I+ Q + E+ + ++ A+G S + ++G + ++ A D
Sbjct: 163 AQ-IVRQAKLL---GEETRFVMVFAAMGVTYSDARFFQEEFENSGVLGKVVMYLNLADDP 218
Query: 281 APLQYLAPYSGCAMGEFFR-DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 339
+ L P + A E+ + H L++ D++ A A R+++ P R+ YPG +
Sbjct: 219 PIKRLLLPRTALACAEYLAFEQDLHVLVVMTDMTHYAEALREVATAKGDVPSRKGYPGYL 278
Query: 340 FYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY 399
+ + + ERA ++ ++ G S+T +PV+ + D++ IP IT+GQI L EL +
Sbjct: 279 YSDLAEIYERAGRIKNRRG--SITMVPVVSMPSDDITHPIPDLTGYITEGQIVLSRELHH 336
Query: 400 KGIRPAINVGLSVSR-----VGSAAQTKAMKQVAGSMKLELAQYREVAAFAQF--GSDLD 452
+GI P +N+ S+SR +G + + +VA + A+ EV A +L
Sbjct: 337 QGIYPPVNIPPSLSRLMKDGIGKNSTREDHPRVASQLYAAYAKALEVRNLASIIGAEELS 396
Query: 453 AATQQLLN-RGMRLTELLKQGQYVPMAIEEQVAIIY 487
+ +Q L+ G +KQG+ +I E + + +
Sbjct: 397 PSDRQFLDFAGQFEQRFVKQGEEEDRSIIETLDLAW 432
>UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (EC
3.6.3.15) (Na(+)- translocating ATPase subunit B); n=14;
cellular organisms|Rep: V-type sodium ATP synthase
subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase
subunit B) - Enterococcus hirae
Length = 458
Score = 121 bits (291), Expect = 6e-26
Identities = 104/384 (27%), Positives = 173/384 (45%), Gaps = 16/384 (4%)
Query: 66 LEETGRVLSIGDGIARVYGLKNIQAEEMVE--FSSG--LKGMALNLEPDNVGVVVF-GND 120
++E + + + V + ++ EE++E +G +G L ++ D V +F G
Sbjct: 2 IKEYRTIKEVVGPLMAVEKVSGVKYEELIEVRMQNGEIRRGQVLEVQEDKAMVQIFEGTS 61
Query: 121 KLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPR 180
+ + V+ G + + V E ++GRV D LG P D I + + + + I R
Sbjct: 62 GINLKNSSVRFLGHPLQLGVSEDMIGRVFDGLGRPKDNGPEILPEKYLDINGEVINPIAR 121
Query: 181 VSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKL 240
E +QTGI A+D L + RGQ+ + LA I Q D+
Sbjct: 122 DYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKELAAQ-IARQATVLDSSDD---F 177
Query: 241 YCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR- 299
++ AIG ++ GAI+ +++ A+D A + P E+
Sbjct: 178 AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPAIERIATPRMALTAAEYLAY 237
Query: 300 DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGG 359
+ G H L+I D++ A A R++S R PGR YPG ++ + L ERA ++
Sbjct: 238 EKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLYTNLATLFERAGRIRGLK-- 295
Query: 360 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRV---G 416
GS+T +P++ D + IP IT+GQI L EL+ GI+P I+V S+SR+ G
Sbjct: 296 GSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGIQPPIDVLPSLSRLKDKG 355
Query: 417 SAAQTKAMKQVAGSMKLELAQYRE 440
+ A K + A +M A Y +
Sbjct: 356 TGA-GKTREDHAATMNQLFAAYAQ 378
>UniRef50_Q8VNS1 Cluster: EscN protein; n=11;
Enterobacteriaceae|Rep: EscN protein - Escherichia coli
Length = 446
Score = 119 bits (287), Expect = 2e-25
Identities = 109/414 (26%), Positives = 183/414 (44%), Gaps = 22/414 (5%)
Query: 39 HVSTTHKAAEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLK-NIQAEEMVEFS 97
H S + I +L + + + G++ +IG I + K I A +E S
Sbjct: 5 HDSVLERYPRIQKVLNSTVPTLSLNSSTRYEGKITNIGGTIIKARLPKARIGAFYKIEPS 64
Query: 98 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 157
L + + ++ D V ++ F + + G + G + VG+++LGR+VD +G P+
Sbjct: 65 QRLAEV-IAIDEDEVFLLPFEHISGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMG 123
Query: 158 GK--GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG 215
P R + P + R + +P G++A+D L+ G GQR I G
Sbjct: 124 SNITAPYLPFERSLYA-EPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVG 182
Query: 216 KTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSA 275
K+ L + I N + + IG++ V + + L + ++V
Sbjct: 183 KSTL-LGMICNGASAD---------IIVLALIGERGREVNEFLALLPQSTLSKCVLVV-- 230
Query: 276 TASDAAPLQYL-APYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 334
T SD L+ + A ++ + EFFRD GK+ L++ D +++ A A R + L P R
Sbjct: 231 TTSDRPALERMKAAFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGG 290
Query: 335 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 394
+P VF +LLERA GS+TA+ + ++ +V+ I V SI DG I L
Sbjct: 291 FPPSVFSSLPKLLERAGPAPK----GSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLT 346
Query: 395 TELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG 448
EL + PAI++GLS SRV + A K +A Y+ + + G
Sbjct: 347 RELAEENHFPAIDIGLSASRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIG 400
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 119 bits (287), Expect = 2e-25
Identities = 95/368 (25%), Positives = 169/368 (45%), Gaps = 23/368 (6%)
Query: 123 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK------GPIDTKSRMRVGIKAPG 176
I+ G ++ G + V + +LG V+D G P+ G GP D ++ + V A
Sbjct: 82 IQVGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGDCLGAFAGPEDRRTTLPVIADALP 141
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
R + + TGI+A+DS + +G GQR + GKT L + N
Sbjct: 142 PTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCD------ 195
Query: 237 KKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGE 296
++ IG++ + + + D +++V AT+ ++ + A ++ A+ E
Sbjct: 196 ----VIVFGLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAE 251
Query: 297 FFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDK 356
FR G+ L++ D L++ A A R++ + P GR P V+ L RL+ERA MS+
Sbjct: 252 AFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAG-MSEN 310
Query: 357 MGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVG 416
GS+TAL + + ++ + V S+ DG I L +L +G PAI+V S+SR+
Sbjct: 311 ---GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRIL 367
Query: 417 SAAQTKAMKQVAGSMKLELAQYREVAAFAQFG---SDLDAATQQLLNRGMRLTELLKQGQ 473
S + ++ ++ LA Y++V + G + D T + + L+Q
Sbjct: 368 SNVTGRKHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQDL 427
Query: 474 YVPMAIEE 481
P+ ++E
Sbjct: 428 REPVPLQE 435
>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
Chlamydiaceae|Rep: Virulence ATPase, putative -
Chlamydia muridarum
Length = 434
Score = 117 bits (282), Expect = 7e-25
Identities = 100/343 (29%), Positives = 160/343 (46%), Gaps = 21/343 (6%)
Query: 138 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 197
+P+ +LGRV+D GNP+DG P+ + P + R ++E TGI+A+D+L
Sbjct: 92 LPLSHHLLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPSPMSRTPIQEIFPTGIRAIDAL 151
Query: 198 VPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQI 257
+ IG GQR I + GK++L + TI KG + + + IG++ V
Sbjct: 152 LTIGEGQRVGIFSEPGGGKSSL-LSTIA------KGSQQTINVIAL---IGERGREVRDY 201
Query: 258 VKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAV 317
V + + A TIIV +TA + A + +A + + E+FRD G L I D LS+
Sbjct: 202 VNQHKEGLAAQRTIIVVSTAHETAASKVIAGRAAITIAEYFRDQGARVLFIMDSLSRWIE 261
Query: 318 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSA 377
+ ++++L Y VF+ S LERA +DK GS+T+ + A
Sbjct: 262 SLQEVALARGETLSTHHYAASVFHHVSEFLERAGN-NDK---GSITSFYAMLHYANHPDI 317
Query: 378 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKL--EL 435
+ V S+ DG FL + + P IN+ S+SR SA Q A + +L L
Sbjct: 318 F-NDYVKSLLDGHFFL-SPVEKSFFSPPINLLTSLSR--SACQLALPHHYAAAQELLSLL 373
Query: 436 AQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMA 478
Y E Q G+ + + L+R +RL L++ P++
Sbjct: 374 KAYHEAIDIIQLGAYVSGQDAK-LDRAIRLLPSLREFLSQPLS 415
>UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
Flagellum-specific ATP synthase - Buchnera aphidicola
subsp. Cinara cedri
Length = 457
Score = 117 bits (282), Expect = 7e-25
Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 16/355 (4%)
Query: 66 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 125
+E TG SIG+ K IQ+ + + G K L P +F K+ E
Sbjct: 39 IEVTGIYSSIGEYCWVECFYKGIQSTIICKVM-GFKKKIFFLIPIQNSYGIFPGAKVFSE 97
Query: 126 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSV 183
I + P G ++LGRV++ G+P+D G ++ K ++ K I P R +
Sbjct: 98 NYIFNKDIKFQYFPFGSKLLGRVLNGFGHPLDNLGDLNLKKKLFNFFKKKPINPLNRKPI 157
Query: 184 REPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCI 243
E + TG+ A++SL+ +GRGQR I GK+ L ++ D +
Sbjct: 158 TEILDTGVCAINSLLTVGRGQRMGIFSQAGIGKSMLL-------GMISRHTDAD---IIV 207
Query: 244 YVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGK 303
+G++ V + + ++ ++++ ++A + + + A+ E+F + G
Sbjct: 208 VSLVGERGREVKDFIDNILGKDSLKKSVVIVSSADVSPMFKIQSVEYATAVAEYFCNKGN 267
Query: 304 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLT 363
+ L+I D L++ A+AYR++S L P + YP +F L+ER + +K GS+T
Sbjct: 268 NVLLIVDSLTRYAMAYREVSNSLYEIPVKR-YPASIFSNIPYLIERTGNIDNK--SGSIT 324
Query: 364 ALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 418
+ I T+ + + I S+ DG I L L G PAIN+ S+SR+ S+
Sbjct: 325 SFYTILTEGDEYNDPILDITKSVLDGHIILSNVLSESGHYPAINIEKSISRLMSS 379
>UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase;
n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase
- Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 475
Score = 117 bits (281), Expect = 9e-25
Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 9/316 (2%)
Query: 102 GMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 160
G + L D + V V + L V TG + + V +LGRV+D LG P DG
Sbjct: 51 GQVIALSRDRIAVQVLEETRGLAPARSEVTLTGQVARLGVARGMLGRVLDGLGRPADGLP 110
Query: 161 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 220
P ++R + A + R + ++TG+ A+D + + RGQ+ + + LA
Sbjct: 111 PPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMNTLVRGQKLPVFSCAGLPASRLA 170
Query: 221 IDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDA 280
I+ Q R GE ++ A+G ++ AG ++ T++ A D
Sbjct: 171 AQ-IVCQARVRGGE----PFAVVFAAMGSPFREYHAFLEAFRAAGVLDRTVVFLNRAEDP 225
Query: 281 APLQYLAPYSGCAMGEFFR-DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 339
+ + P E +G H L++ D++ A R+++L PGR YPG +
Sbjct: 226 PIERLMTPRCALTCAEHLAFTHGLHVLVVLTDVTSYCEALREVALAREEVPGRRGYPGYM 285
Query: 340 FYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY 399
+ + + ERA ++ + GSLT LPV+ D++ IP IT+GQI L +L
Sbjct: 286 YTDLATIFERAGRVRGR--PGSLTQLPVLTMPDDDLTHPIPDLTGYITEGQIVLSRDLDR 343
Query: 400 KGIRPAINVGLSVSRV 415
+G+ P I+V S+SR+
Sbjct: 344 RGVYPPIDVLPSLSRL 359
>UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia
xenovorans LB400|Rep: ATPase FliI/YscN - Burkholderia
xenovorans (strain LB400)
Length = 444
Score = 116 bits (278), Expect = 2e-24
Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 22/334 (6%)
Query: 144 ILGRVVDALGNPIDGKGPID---TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPI 200
+LGRVVD LGNP+DG GP+ + + G + R + P TG++A+D L+
Sbjct: 102 LLGRVVDGLGNPLDG-GPVPRPLASAAAQAGEGTLNPLERPVIATPFATGVRAIDGLLTC 160
Query: 201 GRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKR 260
G GQR I GK+ TI+ D + IG++ VA+ +
Sbjct: 161 GVGQRTGIFAPAGGGKS-----TIMGMIANGASTDA-----IVVALIGERGREVAEFIHD 210
Query: 261 LTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYR 320
+ + TI+++AT+ A + A + R +G++ L+++D L++ A A R
Sbjct: 211 HLERRRAS-TIVIAATSDRPAAERIKAAELASQVAVGLRASGRNVLLLFDSLTRYARALR 269
Query: 321 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIP 380
++ L + PP R +P VF RL+E A + GS+TA + D+S +
Sbjct: 270 ELGLAVGEPPLRGGFPPSVFAQLPRLIEAAGVTAQ----GSITAFYTVLADEADLSDPVA 325
Query: 381 TNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYRE 440
S+ DG I L ++L G PAI++ S SR+ + + A ++ LA+Y +
Sbjct: 326 EEARSLLDGHIQLSSKLGAAGHYPAIDILRSRSRLMTRVAAAVHQADANRVRDWLARYED 385
Query: 441 VAAFAQFGS---DLDAATQQLLNRGMRLTELLKQ 471
V Q G DA T Q ++R + L+Q
Sbjct: 386 VELLLQIGEYQRGNDADTDQAIDRRAAIVSFLRQ 419
>UniRef50_Q37798 Cluster: CF1ATPase alpha-subunit; n=1; Allium
ampeloprasum|Rep: CF1ATPase alpha-subunit - Allium
porrum (Leek)
Length = 136
Score = 115 bits (277), Expect = 3e-24
Identities = 59/130 (45%), Positives = 79/130 (60%)
Query: 420 QTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAI 479
Q KAMKQVAG +KLELAQ+ E+ AFAQF SDLD ATQ L RG RL ELLKQ Q P+ +
Sbjct: 1 QIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSDPLTV 60
Query: 480 EEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLK 539
EEQ+A IY G G+LD L+ +I F + ++K + ++ T E++ LK
Sbjct: 61 EEQIATIYIGANGYLDSLEIGQIKKFLIKLRTYLKKNKPQFQEIVSSTKTFTEEAETFLK 120
Query: 540 KIVTDFLATF 549
+ + + F
Sbjct: 121 EAIQEHTELF 130
>UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2;
Aquifex aeolicus|Rep: Flagellum-specific ATP synthase -
Aquifex aeolicus
Length = 443
Score = 115 bits (277), Expect = 3e-24
Identities = 95/390 (24%), Positives = 183/390 (46%), Gaps = 26/390 (6%)
Query: 66 LEETGRVLSI-GDGIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGNDKLI 123
L+ +G ++S G + + NI E ++ +S ++G + D V V+ + +
Sbjct: 24 LKVSGEIVSAKGIYLEAILPFANIGNEVEIQSNSRRIRGEVIGFSGDKVLVMPYEPVFGL 83
Query: 124 KEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK--GPIDTKSRMRVGIKAPGIIP-- 179
++GD V +V G ++G+VVD GNP+DG G ++ K G++ P I P
Sbjct: 84 RKGDKVLLKNELVSTKTGNGVVGKVVDPFGNPLDGGFIGFVEEK-----GLELPQINPLY 138
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
R +RE TG+++V++L +G+GQ+ I GK+ L + I R +K +
Sbjct: 139 RERIREVFDTGVRSVNALFTLGKGQKIGIFAGAGVGKSTL-LGMIT---RHSKAD----- 189
Query: 240 LYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR 299
+ IG++ V + ++ + + +++V +TA + L+ S F
Sbjct: 190 -VVVLALIGERGREVKEFLEEVLGEEGLKKSVVVVSTADQSPILKVKGAISAVVHAHHFA 248
Query: 300 DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGG 359
GK L++ D +++ A+A R++ L PP + + VF +LL R A+
Sbjct: 249 SQGKDVLLLMDSITRLALAQREIGLAAGEPPTLKGFTPSVF----QLLTRIAESCGAFKK 304
Query: 360 GSLTALPVIETQAGDVSA-YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 418
GS+T + + + D+S I +++ + DG I L + +G+ PA++ S+SR+
Sbjct: 305 GSITGIFTVLVEGDDISLDPIADSLMGVLDGHIILSRKRAVRGLFPAVDPVRSLSRLMPK 364
Query: 419 AQTKAMKQVAGSMKLELAQYREVAAFAQFG 448
++ A K L+++ +V + G
Sbjct: 365 LVSEEHFMKANFFKEVLSKFEDVEELVRIG 394
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 115 bits (277), Expect = 3e-24
Identities = 100/404 (24%), Positives = 175/404 (43%), Gaps = 28/404 (6%)
Query: 103 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 162
+A +L + V + + + G+ V TG + VPVG + LGR+++ +G PID +GPI
Sbjct: 83 VAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI 142
Query: 163 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 222
+K R + P + + E ++TGIK VD L P RG + + G GKT +
Sbjct: 143 KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQE 202
Query: 223 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINY-----TIIVSATA 277
I N + + G + ++ +G++ + + + + G IN +V
Sbjct: 203 LINNIAKAHGG-------FSVFTGVGERTREGNDLYREMKETGVINLEGESKVALVFGQM 255
Query: 278 SDAAPLQYLAPYSGCAMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 336
++ + +G + E+FRD G+ L+ D++ + A ++S LL R P Y
Sbjct: 256 NEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQ 315
Query: 337 GDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 396
+ L ER GS+T++ + A D++ P + D L
Sbjct: 316 PTLATDMGLLQERITTTKK----GSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRG 371
Query: 397 LFYKGIRPAINVGLSVSRVGSAAQT-KAMKQVAGSMKLELAQYREVA-AFAQFGSD-LDA 453
+ GI PA++ S SR+ AA + VA ++ L Y+ + A G D L
Sbjct: 372 ISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSE 431
Query: 454 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKL 497
+ + R ++ L Q P A+ E ++ G+ G L +L
Sbjct: 432 QDKLTVERARKIQRFLSQ----PFAVAE----VFTGIPGKLVRL 467
>UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1;
Psychromonas ingrahamii 37|Rep: ATPase, FliI/YscN family
protein - Psychromonas ingrahamii (strain 37)
Length = 436
Score = 113 bits (273), Expect = 9e-24
Identities = 88/353 (24%), Positives = 172/353 (48%), Gaps = 21/353 (5%)
Query: 145 LGRVVDALGNPIDG-KGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRG 203
LGRV++A G ID P + +A I+ + + EP GIK+++ L+ + +G
Sbjct: 96 LGRVLNAHGEAIDDLPSPRGIDTITLRSAEAINILKKKPISEPFDVGIKSINGLLTLAKG 155
Query: 204 QRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTD 263
QR ++ GK+ L +I +F++ + + IG++ V + +++
Sbjct: 156 QRVGLVAGSGVGKSVLM--GMIT--KFSEAD------VVVVGLIGERNREVREFIEKNIG 205
Query: 264 AGAINYTIIVSATASDAAPLQYLAPYSGC-AMGEFFRDNGKHALIIYDDLSKQAVAYRQM 322
A + +++++A A D +PL + C ++ E++RD G + L++ D L++ A+A R++
Sbjct: 206 AEGLKKSVVIAAPA-DQSPLMRIQATELCHSVAEYYRDKGANVLLLVDSLTRYAMAQREV 264
Query: 323 SLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTN 382
++ L P + YP VF LLER+ + G++TA+ I ++ + +
Sbjct: 265 AISLGELPAIKGYPPSVFSFIPPLLERSGNGHE--NAGTMTAIYTILSEGDEDYDPVVDT 322
Query: 383 VISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY---R 439
+I DG I L EL +G PA+++ S+SR A ++ Q+A K + Y +
Sbjct: 323 AKAILDGHIVLSKELAQRGQFPAVDIEKSISRCMDAVVSEPHLQIARQCKRLYSMYNKAK 382
Query: 440 EVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEE---QVAIIYCG 489
++ A + D + + + + +LL Q ++ EE Q+A+I+ G
Sbjct: 383 DLIALGGYQQGNDPELDEAIQKNPIIEKLLMQNTIQYVSFEESCQQLALIFKG 435
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 113 bits (273), Expect = 9e-24
Identities = 89/366 (24%), Positives = 165/366 (45%), Gaps = 16/366 (4%)
Query: 114 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 173
V + D L++ G V+ TG + PVG +LGR+ + +G PID +G + +
Sbjct: 60 VAMDSTDGLVR-GLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGELKDIEYWPIHRP 118
Query: 174 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 233
AP + + + E ++TG+K +D L P +G + G GKT L ++ I N + G
Sbjct: 119 APSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRNIAIEHHG 178
Query: 234 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCA 293
+ I+ +G++ + +T+AG +N T++V ++ ++ +
Sbjct: 179 -------FSIFAGVGERTREGNDLYLEMTEAGVLNNTVLVFGQMNEPPGARFRVALTALT 231
Query: 294 MGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 352
+ E+FRD G+ L+ D++ + A ++S LL R P Y + L ER
Sbjct: 232 IAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTDMGELQERITS 291
Query: 353 MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV 412
GS+T++ I A D++ P + D I L +L G+ PA++ S
Sbjct: 292 TKK----GSITSVQAIYVPADDITDPAPATTFTHLDATIVLSRQLAALGLYPAVDPLDST 347
Query: 413 SRV-GSAAQTKAMKQVAGSMKLELAQYREVA-AFAQFG-SDLDAATQQLLNRGMRLTELL 469
S++ K +VA ++ L +Y+++ A G +L + ++ R ++ L
Sbjct: 348 SKILDPNIVGKEHYEVARGVQEVLQRYKDLQDIIAILGMEELSEEDKLIVQRARKIQRFL 407
Query: 470 KQGQYV 475
Q +V
Sbjct: 408 TQPTHV 413
>UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep:
FliI protein - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 442
Score = 113 bits (271), Expect = 2e-23
Identities = 89/351 (25%), Positives = 151/351 (43%), Gaps = 16/351 (4%)
Query: 140 VGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP 199
VG +LGRV+DA G P+DG D + + + R +V P+ G++A+++ +
Sbjct: 98 VGSALLGRVIDAEGAPLDGLPAPDCTGEWPLAGRVMNPLARTAVSRPLDVGVRAINAALT 157
Query: 200 IGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVK 259
+G+GQR I+ GK+ L I R+ + + IG++ V
Sbjct: 158 VGQGQRIGIVAGSGEGKSVL----IEMMTRYTAAD------VIVVGLIGERAREVGAFAA 207
Query: 260 RLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAY 319
+ A +V+ A + L+ A A+ E FR GK L+I D L++ A A
Sbjct: 208 SVMQGEAARKLCMVAVPADRSPLLRLRAARRATAIAEHFRSEGKQVLLIMDSLTRVAHAQ 267
Query: 320 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGD-VSAY 378
R++ L L P + YP V + L+ER G G++TA+ + D +
Sbjct: 268 REVGLALGEQPTAKGYPPSVVSMIPGLIERTG--PGLPGEGAITAIYTVLADGDDTTNDP 325
Query: 379 IPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQY 438
+ +I DG L G+ PAI++ SVSR + ++ A ++ +A Y
Sbjct: 326 VVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAARLRQLIALY 385
Query: 439 ---REVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAII 486
R++ + + DA Q + R+ L+ QG + P E A +
Sbjct: 386 SDNRDLMLMGGYAAGQDADLDQAVQLWPRIRALIGQGPHEPADFEASRAAL 436
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 111 bits (266), Expect = 6e-23
Identities = 92/364 (25%), Positives = 166/364 (45%), Gaps = 20/364 (5%)
Query: 123 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNP-IDGKGPIDTKSRMRVGIKAPGIIPRV 181
++ G V+ TG + VPVG+ +LGR++ G P DG R + AP + +
Sbjct: 97 LRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPLLAEQK 156
Query: 182 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 241
S TGIK +D L P+ +G + + G GKT ++ I E+ +
Sbjct: 157 SANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVFVMELI-------HAMVERYRGI 209
Query: 242 CIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRD- 300
++ IG++ +++ + +G + T++V ++ ++ P + A+ E+FRD
Sbjct: 210 SVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDE 269
Query: 301 NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGG 360
++ L++ D++ + A ++S LL R P R Y + + L ER A + G
Sbjct: 270 RAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVE----GA 325
Query: 361 SLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN-VGLSVSRVGSAA 419
++TA+ + A D + T + + D + L + +G+ PAI+ V S +
Sbjct: 326 AVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLV 385
Query: 420 QTKAMKQVAGSMKLELAQYREVA-AFAQFGSD-LDAATQQLLNRGMRLTELLKQGQYVPM 477
+A +VA ++ + YRE+ A G D L A ++L+ R RL L Q P
Sbjct: 386 VGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQ----PF 441
Query: 478 AIEE 481
A+ E
Sbjct: 442 AVTE 445
>UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney
isoform; n=451; cellular organisms|Rep: Vacuolar ATP
synthase subunit B, kidney isoform - Homo sapiens
(Human)
Length = 513
Score = 111 bits (266), Expect = 6e-23
Identities = 98/365 (26%), Positives = 157/365 (43%), Gaps = 16/365 (4%)
Query: 72 VLSIGDGIARVYGLKNIQAEEMVEFS----SGLKGMALNLEPDNVGVVVF-GNDKLIKEG 126
V S+ + + +K Q E+V F+ + G L + V VF G +
Sbjct: 44 VCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARK 103
Query: 127 DIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSVR 184
+ TG I+ PV E +LGRV + G PID KGP+ + + I I P R+
Sbjct: 104 TTCEFTGDILRTPVSEDMLGRVFNGSGKPID-KGPV-VMAEDFLDINGQPINPHSRIYPE 161
Query: 185 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGED----EKKKL 240
E +QTGI +D + I RGQ+ I +A K +
Sbjct: 162 EMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNF 221
Query: 241 YCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRD 300
++ A+G T G + + A+D + + P EF
Sbjct: 222 AIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAY 281
Query: 301 N-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGG 359
KH L+I D+S A A R++S PGR +PG ++ + + ERA ++ + G
Sbjct: 282 QCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR--G 339
Query: 360 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA 419
GS+T +P++ D++ IP IT+GQI+++ +L + I P INV S+SR+ +A
Sbjct: 340 GSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSA 399
Query: 420 QTKAM 424
+ M
Sbjct: 400 IGEGM 404
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 111 bits (266), Expect = 6e-23
Identities = 78/320 (24%), Positives = 146/320 (45%), Gaps = 18/320 (5%)
Query: 103 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 162
+A +L ++V + + + + G V TG + VPVG++ LGR+++ +G P+D GP+
Sbjct: 75 VAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPL 134
Query: 163 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 222
T +R + +AP + + + + + TGIK VD L P +G + + G GKT L ++
Sbjct: 135 KTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIME 194
Query: 223 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINY-------TIIVSA 275
I N + + G Y ++ +G++ + + ++G + +V
Sbjct: 195 LINNVAKAHGG-------YSVFAGVGERTREGNDLYHEMIESGVNKHGGGEGSKAALVYG 247
Query: 276 TASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 335
++ + +G + E FRD G+ L D++ + A ++S LL R P Y
Sbjct: 248 QMNEPPGARARVALTGLTVAEQFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGY 307
Query: 336 PGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 395
+ ++ ER + GS+T++ I A D++ P + D L
Sbjct: 308 QPTLATDMGQMQERITTTTK----GSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSR 363
Query: 396 ELFYKGIRPAINVGLSVSRV 415
+ KGI PA++ S SR+
Sbjct: 364 SIAEKGIYPAVDPLDSTSRM 383
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 111 bits (266), Expect = 6e-23
Identities = 103/400 (25%), Positives = 176/400 (44%), Gaps = 33/400 (8%)
Query: 114 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 173
+ + G + L++ G V +GA + +PVG + LGR+++ +G PID +GPI TK + +
Sbjct: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAE 169
Query: 174 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 233
AP + +E + TGIK VD L P +G + + G GKT L ++ I N + + G
Sbjct: 170 APEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 229
Query: 234 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATA------SDAAPLQYLA 287
Y ++ +G++ + + ++G IN S A ++ +
Sbjct: 230 -------YSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARV 282
Query: 288 PYSGCAMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 346
+G + E+FRD G+ L+ D++ + A ++S LL R P Y + +
Sbjct: 283 ALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTM 342
Query: 347 LERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 406
ER GS+T++ I A D++ P + D L + GI PA+
Sbjct: 343 QERITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 398
Query: 407 NVGLSVSRVGSAAQTKAMK-QVAGSMKLELAQYREVA-AFAQFGSD-LDAATQQLLNRGM 463
+ S SR+ + VA ++ L Y+ + A G D L + ++R
Sbjct: 399 DPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRAR 458
Query: 464 RLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 503
++ L Q P QVA ++ GH+ KL P K T
Sbjct: 459 KIQRFLSQ----PF----QVAEVF---TGHMGKLVPLKET 487
>UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:
SpaL/InvC - Sodalis glossinidius
Length = 437
Score = 109 bits (261), Expect = 2e-22
Identities = 93/325 (28%), Positives = 151/325 (46%), Gaps = 23/325 (7%)
Query: 132 TGAIVDVPVGEQILGRVVDALGN---PIDGKGP---IDTKSRMRVGIKAPGIIPRVSVRE 185
TG +P+GE +LG V+D LGN +DG I T+ R + ++A R + E
Sbjct: 82 TGKAFPIPLGEALLGAVLDPLGNICARLDGATETALIATEHRP-IDVEALHFSEREPIAE 140
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
+ T I+A+D L+ G GQR I GKT+L ++ +I E + +Y + +
Sbjct: 141 KLITRIRAIDGLLTCGHGQRLGIFAAAGCGKTSL-MNMLI--------EHSEADVYVVGL 191
Query: 246 AIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHA 305
IG++ V + V+ L + + ++V AT+ A+ + A + E+FRD G+
Sbjct: 192 -IGERGREVTEFVETLRHSPRRHKCVLVYATSDYASLERCNAALVATTVAEYFRDQGRRV 250
Query: 306 LIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTAL 365
++ D L++ A A R ++L P R YP VF R+LER GS+TA
Sbjct: 251 VLFLDSLTRFARALRDVALAAGEAPARRGYPASVFDALPRVLERPGNSL----SGSITAF 306
Query: 366 PVIETQAGD-VSAYIP-TNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKA 423
+ + D P N + +DG I+L +L PAI++ S SRV
Sbjct: 307 YTVLLEGDDEPDPDAPDENPLRFSDGHIYLSRKLSAASHYPAIDILHSASRVAGQVTDAR 366
Query: 424 MKQVAGSMKLELAQYREVAAFAQFG 448
+ +AG+M+ L + E+ G
Sbjct: 367 QQALAGAMRGLLTRLEEMQTLIDLG 391
>UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2;
Sulfitobacter|Rep: Flagellum-specific ATP synthase -
Sulfitobacter sp. EE-36
Length = 463
Score = 109 bits (261), Expect = 2e-22
Identities = 88/351 (25%), Positives = 153/351 (43%), Gaps = 13/351 (3%)
Query: 100 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 159
+ G ++ + ++ V+ FG + + G+ V+ V + +G VVDALG P+
Sbjct: 56 IDGEVVSAQGSDLCVLPFGTWEGVSVGNTVELIEHDDMVSPDDSWIGTVVDALGRPLTQY 115
Query: 160 GPIDTKSRM-RVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTA 218
R R PG R V E ++T IK +D PI RGQR + GK+
Sbjct: 116 TRARRPRRKTRFRANPPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKS- 174
Query: 219 LAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATAS 278
T++ N D + IG++ V Q ++ + ++V +T
Sbjct: 175 ----TMMAMLARNTDAD-----VIVIGLIGERGREVQQFIQEDLGEEGMARAVVVVSTGD 225
Query: 279 DAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGD 338
+A L+ A + A+ E+F+ GK L++ D +++ A+A R++ L PP YP
Sbjct: 226 EAPLLRKQAALTTTAIAEYFKSTGKQVLLLLDSVTRFAMAQREIGLARGEPPTLRGYPPS 285
Query: 339 VFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELF 398
VF LLERA G +T L + D++ I V I DG + L+ +
Sbjct: 286 VFSELPHLLERAG--PGMAAEGDITGLYTVLVDGDDMNEPIADAVRGIVDGHLVLDRRIA 343
Query: 399 YKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGS 449
+G PAI++ S+SR+ + ++ + L +Y ++ + G+
Sbjct: 344 EQGRFPAIDLQKSLSRMLPGCHSPEEYEITKVARKALGRYADMEDLIRLGA 394
>UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25;
Eukaryota|Rep: Vacuolar ATP synthase subunit B -
Plasmodium falciparum
Length = 494
Score = 108 bits (259), Expect = 4e-22
Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 13/323 (4%)
Query: 101 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 159
+G L + + VF G + + V+ +G I+ +P+ +++LGRV + G PID K
Sbjct: 68 QGQILEVCGKKAVIQVFEGTSGIDNKNSYVEVSGDILKMPMSDEMLGRVFNGSGKPID-K 126
Query: 160 GPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 217
GP + + + I I P RV +E +QTGI +D + I RGQ+ +
Sbjct: 127 GP-NILADDYLDINGNPINPQCRVYPKEMIQTGISTIDVMNSIVRGQKIPLFSAAGLPHN 185
Query: 218 ALAIDTIINQQRFNKGED----EKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIV 273
+ I Q +G+D ++ A+G T + + G + +
Sbjct: 186 EIGAQ-ICRQASLVQGKDVLDHSDDNFAVVFGAMGVNMETARYFRQDFEENGKMERVCLF 244
Query: 274 SATASDAAPLQYLAPYSGCAMGEFFR-DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 332
A+D + L P E+ + H +I D+S A A R++S PGR
Sbjct: 245 LNLANDPTIERILTPRIALTTAEYLAFEKEMHVFVILTDMSSYADALREVSSAREEVPGR 304
Query: 333 EAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIF 392
YPG ++ S + ERA ++ + GS+T P++ D++ IP IT+GQIF
Sbjct: 305 RGYPGYMYSDLSTIYERAGRVEGR--NGSITQFPILTMPNDDITHPIPDLTGYITEGQIF 362
Query: 393 LETELFYKGIRPAINVGLSVSRV 415
++ L+ + I P INV S+SR+
Sbjct: 363 VDRNLYNRQIYPPINVLPSLSRL 385
>UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Flagellar protein
export ATPase FliI - Hyphomonas neptunium (strain ATCC
15444)
Length = 462
Score = 106 bits (255), Expect = 1e-21
Identities = 100/386 (25%), Positives = 167/386 (43%), Gaps = 23/386 (5%)
Query: 78 GIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV 136
GIA V L + E ++E + G L++ D+V +++ +I+ GD+V
Sbjct: 24 GIAGVSELAGVGNEIVIEKQGQKIHGEILSVSGDSVTALLYSPSDIIRIGDVV-HIEQEA 82
Query: 137 DVPVGEQILGRVVDALGNPIDGK--GPIDTKSRMRVGIKAPGIIPRVSVR--EPMQTGIK 192
+ G+ LG++++ G G T + ++AP + + R + TG
Sbjct: 83 RIEPGDHWLGQIINYRGEVATEMPAGAGLTAKGVSRALRAPALPAHLRHRLGPRLATGWM 142
Query: 193 AVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRS 252
D+L+PI RGQR + GK+ T + D + IG++
Sbjct: 143 VTDTLLPICRGQRLGLFAGSGVGKS-----TFLGSLAGGLEADR-----VVIALIGERSR 192
Query: 253 TVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDL 312
V + V + T++VSATAS++ + A Y A E FRD G L ++D +
Sbjct: 193 EVGEFVNVNLPETVRHKTVVVSATASESPGAKKRAAYCAMATAEHFRDQGHSVLFLFDSI 252
Query: 313 SKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQA 372
++ A A+R+++LL P A+P + + L ERA + G +T + +
Sbjct: 253 TRFAEAHREVALLAGETPALNAFPPSTVRVIAELAERAGPGTG--AKGDITGIFSVLVAG 310
Query: 373 GDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMK 432
D+ + + I DG I L + +G PAI+V SVSR AA + +
Sbjct: 311 SDLEEPVADMIRGILDGHIILSRNIAERGRYPAIDVLKSVSRALPAAANDWENDLLRDYR 370
Query: 433 LELAQYREV-----AAFAQFGSDLDA 453
+A Y EV A+ +FG D DA
Sbjct: 371 RMIALYDEVAPMLRASLFEFGRDKDA 396
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 106 bits (255), Expect = 1e-21
Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 21/311 (6%)
Query: 114 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 173
+ + G + L++ G V TGA + VPVG LGR+++ LG PID +G I T+ + +
Sbjct: 139 IAMDGTEGLVR-GRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRD 197
Query: 174 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 233
AP ++ + +E + TGIK VD L P RG + + G GKT L ++ I N + + G
Sbjct: 198 APALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 257
Query: 234 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAI--------NYTIIVSATASDAAPLQY 285
+ ++ +G++ + + + ++G I + +V ++ +
Sbjct: 258 -------FSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARA 310
Query: 286 LAPYSGCAMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 344
+G + E+FRD G+ L+ D++ + A ++S LL R P Y +
Sbjct: 311 RVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLG 370
Query: 345 RLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRP 404
L ER GS+T++ I A D++ P + D L ++ GI P
Sbjct: 371 ALQERITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYP 426
Query: 405 AINVGLSVSRV 415
A++ S SR+
Sbjct: 427 AVDPLDSTSRM 437
>UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n=2;
Brucella|Rep: Flagellum-specific ATP synthase FliI -
Brucella suis
Length = 422
Score = 105 bits (253), Expect = 2e-21
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 12/215 (5%)
Query: 146 GRVVDALGNPIDGKGPIDTKSR-MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQ 204
GRV++ALGN IDGKG + +R M AP + R V ++TG+ +D P+ GQ
Sbjct: 109 GRVINALGNAIDGKGALKLGTRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQ 168
Query: 205 RELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDA 264
R I GK+ L + + F+ + G++ V ++++ T A
Sbjct: 169 RIGIFAGSGVGKSTL-LAMMTRAADFDT---------VVLALTGERGREVREMLEE-TMA 217
Query: 265 GAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSL 324
G + TI V AT ++ ++ LAP + A+ E+FRD G++ L+I D +++ A A R++++
Sbjct: 218 GHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTRFAHAAREVAI 277
Query: 325 LLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGG 359
PP YP VF RLLERA S + GG
Sbjct: 278 AAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGG 312
>UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n=1;
Nitratiruptor sp. SB155-2|Rep: Flagellar-specific ATP
synthase FliI - Nitratiruptor sp. (strain SB155-2)
Length = 431
Score = 105 bits (252), Expect = 3e-21
Identities = 80/348 (22%), Positives = 164/348 (47%), Gaps = 18/348 (5%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 129
G++ SI + L ++ ++ +G++ + ++ + + I+ G +
Sbjct: 11 GKITSIKGPLIEAV-LPDVSIGDLCYLDNGVEAEVVGFRDGKTLLMTYDDLYGIRIGSFI 69
Query: 130 KRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQT 189
+ + + VG +LG V+D GNP++ K + ++++ + + + R ++ P+
Sbjct: 70 SSSLSSSKIGVGADLLGTVLDPFGNPLN-KEKLQFETKVSLKNETINPLLRERIKTPLDI 128
Query: 190 GIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQ 249
G+++++ L IG+GQR I GK+ L + RF + + IG+
Sbjct: 129 GVRSINGLFTIGKGQRIGIFASAGVGKSTL----LGMVSRFTSADIN------VIALIGE 178
Query: 250 KRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYL-APYSGCAMGEFFRDNGKHALII 308
+ V + ++ + +I+V AT SD PL L A + A +F GK L +
Sbjct: 179 RGREVREFIEDNLGKEGLEKSIVVVAT-SDQPPLAKLRAVHVAMAYASYFSKKGKDVLFL 237
Query: 309 YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVI 368
D L++ A+A R++ LL+ PP + Y VF L +++E+A ++ GS+T + +
Sbjct: 238 VDSLTRLAMAQREIGLLVGEPPTSKGYTPSVFTLLPKIIEQAGTFHNQ---GSITGIYTV 294
Query: 369 ETQAGDVSA-YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 415
+ ++S+ I + DG + L E+ K + PA++ S+SR+
Sbjct: 295 LFEGEELSSDPIADAAVGFLDGHVVLSKEMAQKRVFPAVDPLKSISRL 342
>UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putative;
n=20; Bacillales|Rep: Flagellum-specific ATP synthase,
putative - Bacillus anthracis
Length = 434
Score = 104 bits (250), Expect = 5e-21
Identities = 89/373 (23%), Positives = 170/373 (45%), Gaps = 23/373 (6%)
Query: 107 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 166
+E +N ++ F + + GD V V +P G +LG+V+ A G ++ +
Sbjct: 62 IEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEDA--ENIP 119
Query: 167 RMRVGIKAPGI--IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 224
++ + AP I R + + +TGIK++DS++ IG GQ+ I GK+ T+
Sbjct: 120 LQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS-----TL 174
Query: 225 INQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQ 284
+ N D + +G++ V +++ + +++V AT+ ++ +Q
Sbjct: 175 LGMIAKNAKADIN-----VISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQ 229
Query: 285 YLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 344
A ++ E+FRD G + L++ D +++ A A R + + ++ P G L
Sbjct: 230 LRAAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELP-----IGGKTLLME 284
Query: 345 RLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRP 404
+++ + S K GS+T + + D++ +P I DG I L+ EL P
Sbjct: 285 SYMKKLLERSGKTQKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYP 344
Query: 405 AINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLL----N 460
AI+V SVSR+ + Q+A M+ L+ Y+E + + G+ + A + N
Sbjct: 345 AISVLDSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKN 404
Query: 461 RGMRLTELLKQGQ 473
+ + LKQG+
Sbjct: 405 KVEGINTFLKQGR 417
>UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16;
Alphaproteobacteria|Rep: Flagella-specific ATPase -
Bartonella bacilliformis
Length = 315
Score = 104 bits (250), Expect = 5e-21
Identities = 75/298 (25%), Positives = 139/298 (46%), Gaps = 14/298 (4%)
Query: 168 MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 227
M V AP + R V ++TG+K +D P+ GQR I GK+ L + ++
Sbjct: 1 MAVEAHAPPALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTL-LSMMMQA 59
Query: 228 QRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLA 287
F+K + +A+ +R + + T ++ + V AT+ ++ ++ LA
Sbjct: 60 DHFDK----------VVLALTGERGREVRDMLDDTLQDKLDKVVAVIATSDESPMMRRLA 109
Query: 288 PYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 347
P + E+F G + L++ D +++ A+A R++++ PP +P VF RLL
Sbjct: 110 PIMATTIAEYFSSLGDNVLLVVDSITRYALAVREIAISAHEPPVSRGFPPRVFSELPRLL 169
Query: 348 ERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
ERA + G GS+T + + D + I + I DG I L+ + +G PA++
Sbjct: 170 ERAG--PGRKGKGSITGVYAVLVDGDDHNDPIADAIRGILDGHIVLDRAIAAQGRFPAVD 227
Query: 408 VGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRL 465
+ S+SR+ S + T + + S+K + +Y E G+ T +L++ + L
Sbjct: 228 ISSSISRLASHSWTGEQRILVQSLKEMIFRYEETRDLRAMGA-YRPGTDHILDQAVHL 284
>UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1;
Roseobacter sp. AzwK-3b|Rep: Flagellum-specific ATP
synthase - Roseobacter sp. AzwK-3b
Length = 474
Score = 103 bits (247), Expect = 1e-20
Identities = 91/377 (24%), Positives = 174/377 (46%), Gaps = 20/377 (5%)
Query: 68 ETGRVLSIGDGIARVYGLKNI-QAEEMVEFSSG----LKGMALNLEPDNVGVVVFGNDKL 122
+ GRV +I + + GL + + + VE + L G L L+ D V+
Sbjct: 21 DIGRVSAIQSQLLGIAGLSRVAKLGDRVEIACRDAVILGGEVLRLDGDLANVMPDFPPDR 80
Query: 123 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVS 182
+ GD V+ + + P ++ +GR+VD G P+DG+ + + P R
Sbjct: 81 VHIGDRVRIADSALIRP-SDRWIGRIVDPFGQPLDGRPLPKGATGSALRADPPSAASRRG 139
Query: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 242
++TG+ A ++L+PI RGQR + GK+ L + T+ G + + +
Sbjct: 140 FGPRLETGLAAFNTLLPIVRGQRIGLFAGSGVGKSTL-LATL--------GRNTQADVV- 189
Query: 243 IYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL-QYLAPYSGCAMGEFFRDN 301
++ IG++ + ++ + +++V+AT SD +PL + ++ A+ E+FRD
Sbjct: 190 VFALIGERGRELRHFIETGLGPEGMLRSVVVAAT-SDQSPLARRRCAWTAMAVAEYFRDA 248
Query: 302 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 361
GK L+++D +++ A A+R++++ P +P ++ L ERA G
Sbjct: 249 GKQVLLMFDSITRFAEAHREVAIAAGELPTMRGFPASTSHMIMSLCERAG--PGAQGCAD 306
Query: 362 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 421
+TAL + D+ + + + DG + L+ ++ +G PAI++ SVSR A +
Sbjct: 307 ITALFSVLVAGSDLDEPVADILRGVLDGHVVLDRQIAERGRYPAIDLLRSVSRSLPQAAS 366
Query: 422 KAMKQVAGSMKLELAQY 438
A Q+ + L Y
Sbjct: 367 DAENQMILRARALLGAY 383
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 102 bits (245), Expect = 2e-20
Identities = 87/382 (22%), Positives = 172/382 (45%), Gaps = 22/382 (5%)
Query: 106 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI--D 163
+L+ V + + G + + G + VPVGE +LGR++D +G + KGP D
Sbjct: 50 HLDARRVRAIALAATSGLPRGVMARTLGGPLRVPVGEAVLGRLLD-VGGVVGDKGPPLPD 108
Query: 164 TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 223
R + P + + + EP TGIK +D L P+ +G + + G GKT L ++
Sbjct: 109 DVPRRPIHRSPPPLAAQAATSEPFATGIKVIDLLTPLVQGGKAAMFGGAGVGKTVLVMEL 168
Query: 224 IINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 283
I E+ + ++ +G++ +++ + ++G + +T++V ++
Sbjct: 169 I-------HAMVERYRGISVFAGVGERSREGHEMLLDMRNSGVLPHTVLVYGQMNEPPGA 221
Query: 284 QYLAPYSGCAMGEFFRDNGK-HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 342
++ P + ++ E+FRD + + L++ D++ + A ++S LL R P R Y +
Sbjct: 222 RWRVPLTALSIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLADE 281
Query: 343 HSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGI 402
+ L ER +GG ++TA+ + A D + T + + D + L + +G+
Sbjct: 282 VAALQERIV----SVGGVAVTAIEAVYVPADDFTDPAVTALAAHVDSMVVLSRAMAAQGM 337
Query: 403 RPAINVGLSVSRVGSAAQTKAMK-QVAGSMKLELAQYREVA-AFAQFG-SDLDAATQQLL 459
PA++ S S + A +A + + YR + + G +L ++++
Sbjct: 338 YPAVDPIASSSLLLDPLVVGAEHVAIATEARRIIEHYRSLQDVISLLGIEELAVEDRRIV 397
Query: 460 NRGMRLTELLKQGQYVPMAIEE 481
R RL L Q P A+ E
Sbjct: 398 GRARRLQRFLTQ----PFAVTE 415
>UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Caulobacter crescentus (Caulobacter vibrioides)
Length = 444
Score = 101 bits (243), Expect = 4e-20
Identities = 83/331 (25%), Positives = 144/331 (43%), Gaps = 17/331 (5%)
Query: 145 LGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG--IIPRVSVREPMQTGIKAVDSLVPIGR 202
LGR+++A G PIDG GP+ + + +K P R V E + G+++++ R
Sbjct: 98 LGRIINAFGEPIDGLGPLP-QGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNVFTTTCR 156
Query: 203 GQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLT 262
GQR I GK+ L + + + + + IG++ V + V+
Sbjct: 157 GQRLGIFAGSGVGKSVL-LSMLAKEATCDA---------VVVGLIGERGREVREFVEETL 206
Query: 263 DAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQM 322
+ ++V AT+ + A + A Y A+ EF RD + L + D +++ A+A R++
Sbjct: 207 GEEGLRRAVVVVATSDEPALTRRQAAYMTLAISEFMRDQDQEVLCLMDSVTRFAMAQREI 266
Query: 323 SLLLRRPPGREAYPGDVFYLHSRLLERAAK---MSDKMGGGSLTALPVIETQAGDVSAYI 379
L PP + Y VF +LLERA D +TAL + D + I
Sbjct: 267 GLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTTAAPITALFTVLVDGDDHNEPI 326
Query: 380 PTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYR 439
I DG I +E + +G PAINV S+SR Q + + + ++ Y
Sbjct: 327 ADATRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQHPHERDIVKGARQVMSAYS 386
Query: 440 EVAAFAQFGSDLDAATQQLLNRGMRLTELLK 470
+ + G+ A +++R +RL ++
Sbjct: 387 NMEELIRIGA-YRAGADPVVDRAIRLNPAIE 416
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 101 bits (241), Expect = 7e-20
Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 26/370 (7%)
Query: 120 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 179
D L++ G V+ TG + VPVG LGR+++ +G PID +GPI ++ R + AP
Sbjct: 73 DGLVR-GTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPISSELRFPIHRPAPSFEE 131
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
+ + E + TGIK VD L P +G + + G GKT + + I N + + G
Sbjct: 132 QAAASEILVTGIKVVDLLCPYLKGGKIGLFGGAGVGKTVIIQELINNIAKAHGG------ 185
Query: 240 LYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL--QYLAP--------Y 289
++ +G++ + + DAG I S S A + Q P
Sbjct: 186 -VSVFAGVGERTREGNDLYFEMQDAGVIKIAEDGSTEGSKVALVYGQMNEPPGARSRVAL 244
Query: 290 SGCAMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 348
+G ++ E+FRD G+ L D++ + A ++S LL R P Y + L E
Sbjct: 245 TGLSLAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQE 304
Query: 349 RAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV 408
R GS+T++ + A D++ P + D L + GI PA++
Sbjct: 305 RITSTKK----GSITSVQAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDP 360
Query: 409 GLSVSR-VGSAAQTKAMKQVAGSMKLELAQYREVA-AFAQFGSD-LDAATQQLLNRGMRL 465
S SR + + QVA ++ L Y+ + A G D L ++++ R R+
Sbjct: 361 LDSTSRSLDPKIVGEEHYQVARQVQQTLQTYKGLQDIIAILGMDELSEDDKKIVGRARRI 420
Query: 466 TELLKQGQYV 475
L Q +V
Sbjct: 421 QRFLSQPFHV 430
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 98.7 bits (235), Expect = 3e-19
Identities = 92/372 (24%), Positives = 160/372 (43%), Gaps = 28/372 (7%)
Query: 120 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 179
D L++ ++V TG+ + VPVG + LGR+++ +G P+D +GPI +K M + AP
Sbjct: 67 DGLVRGQEVVD-TGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPIHADAPPFTE 125
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
+ + + TGIK +D L P +G + + G GKT L + I N + + G
Sbjct: 126 QSTDTAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGG------ 179
Query: 240 LYCIYVAIGQKRSTVAQIVKRLTDAGAI------------NYTIIVSATASDAAPLQYLA 287
+ ++ +G++ + +AG I + +V ++ +
Sbjct: 180 -FSVFAGVGERTREGNDLYHEFLEAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARV 238
Query: 288 PYSGCAMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 346
SG M E+FRD G+ L D++ + A ++S LL R P Y + +L
Sbjct: 239 ALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQL 298
Query: 347 LERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 406
ER GS+T++ I A D++ P + D L + GI PA+
Sbjct: 299 QERITSTKK----GSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAV 354
Query: 407 NVGLSVSR-VGSAAQTKAMKQVAGSMKLELAQYREVA-AFAQFGSD-LDAATQQLLNRGM 463
+ S SR + Q A ++ L +Y+ + A G D L ++++ R
Sbjct: 355 DPLDSSSRNLEPRIVGDEHYQTARDVQEILQRYKNLQDIIAILGMDELSEDDRKVVGRAR 414
Query: 464 RLTELLKQGQYV 475
R+ L Q +V
Sbjct: 415 RIQRFLSQPFHV 426
>UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion
specific; n=2; Ostreococcus|Rep: ATP synthase alpha
chain, sodium ion specific - Ostreococcus tauri
Length = 625
Score = 98.3 bits (234), Expect = 5e-19
Identities = 77/246 (31%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 139 PVGEQILGRVVDALGNPIDGKGPID-TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 197
P GR V+A G + G+ + T R+ + P + R + P+ TG+KAVD L
Sbjct: 148 PSARWAAGRTVNAFGECLKGERMVTGTDDSSRMMREPPTVEDRKPITTPLVTGVKAVDVL 207
Query: 198 VPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQI 257
P+GRGQ L+ G+ TG + L + TI Q+ K + C+Y A+G + S V ++
Sbjct: 208 APLGRGQCMLVSGEPGTGLSELCLTTIAAQK--------KTGVRCVYAALGAQASRVEEV 259
Query: 258 VKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAV 317
KRL GA+ YT IV+ + +Y A + A+ E R G+ L++ DD +
Sbjct: 260 EKRLEQDGAMEYTTIVTVDKEASEGERYAATCTAFAIAEGARAVGQDVLLVLDDFTGLVN 319
Query: 318 AYRQMSLL---LRRPPG----REAYPGDVF--YLHSR------LLERAAKMSDKMGGGSL 362
+ MS L L G E Y G + L R L+R A+++DK+ GGS+
Sbjct: 320 FTKDMSRLAPQLNVAEGTQEEMEEYEGMLISASLAERRRFLGMTLQRVARLNDKLKGGSI 379
Query: 363 TALPVI 368
T + V+
Sbjct: 380 TLMGVM 385
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 97.9 bits (233), Expect = 6e-19
Identities = 88/358 (24%), Positives = 161/358 (44%), Gaps = 27/358 (7%)
Query: 80 ARVYGLKNIQAEE----MVEFSSGLKGMALNLEPDN------VGVVVFGNDKLIKEGDIV 129
++VY ++ +AEE V F + + G + LE + V V GN+ +K G V
Sbjct: 307 SQVYKIRIDKAEEEVLPKVIFYADVNGKEIQLEVADIFDKNLVSTFVLGNETGLKIGTKV 366
Query: 130 KRTGAIVDVPVGEQILGRVVDALGNPIDGK--GPIDTKSRMRVGIKAPGIIPRVSVREP- 186
K + + +++LGRV+D +G +D P+ + ++ R V
Sbjct: 367 KSKNQSYAIKISKRLLGRVIDPIGKILDDSIATPVHGNMYAPLEMQHDSEATRYVVSPKN 426
Query: 187 --MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIY 244
++TGIK +D L+PI +G + ++G GKT + + I +F+ G ++
Sbjct: 427 AILETGIKVIDVLLPIPKGGKTGLLGGAGVGKTVIVQELINAFIKFHDG-------VSVF 479
Query: 245 VAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDN-GK 303
IG++ ++ K G +N T + +++ L++ + SG + E+FR+N GK
Sbjct: 480 AGIGERIREGHELWKEAEALGFLNKTAFIFGQMNESPGLRFRSGISGVKVAEYFRNNLGK 539
Query: 304 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLT 363
L+ D++ + A ++S LL + P Y +F +L ER D G +T
Sbjct: 540 SVLLFMDNIFRYVQAGSEISSLLEKTPSAVGYQPTLFSEMGQLQERINSTKD----GDIT 595
Query: 364 ALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 421
++ + A D + + D I L +L +G+ PAI+ S S++ S T
Sbjct: 596 SIQAMYIPADDFTDPAAVAAFAHFDSTIILSRQLAAEGVYPAIDPLESNSKMLSIKYT 653
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 96.7 bits (230), Expect = 1e-18
Identities = 87/376 (23%), Positives = 172/376 (45%), Gaps = 19/376 (5%)
Query: 106 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT- 164
+L+ +V + ++ G IV G + +PV ++ LGR+++ G P+DG P++T
Sbjct: 65 HLDEHHVRAITLHRASGLQRGLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETH 124
Query: 165 KSRMRVGIKAPGIIPRVSVREP-MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 223
+ R + AP + S +E ++TGIK +D L P RG + + G GKT L ++
Sbjct: 125 EYRDVLANFAP--LEMTSTQETILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTVLLMEL 182
Query: 224 IINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPL 283
+ + ++G ++ +G++ ++ + AG ++ T++V ++ +
Sbjct: 183 MHAIIQLHQGTS-------VFAGVGERIREGHELWHEMKSAGVMDKTLMVFGQMDESPGV 235
Query: 284 QYLAPYSGCAMGEFFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 342
++ S E+ RD G L + D++ + A ++S LL R P Y +
Sbjct: 236 RFRTGLSALTYAEYLRDTLGHEVLFLVDNIYRFVQAGSEISGLLGRMPASVGYQPTLMTE 295
Query: 343 HSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGI 402
+ L ER + G++T++ + A D+S T +I+ D I L KGI
Sbjct: 296 IAELEERMTSTAK----GAVTSVQAVYVPADDMSDPAVTGIITHLDSIIVLSRAQAGKGI 351
Query: 403 RPAINVGLSVSR-VGSAAQTKAMKQVAGSMKLELAQYREVA-AFAQFG-SDLDAATQQLL 459
PA++ S S+ + + +A +++ L +Y+E+ + G +L + ++
Sbjct: 352 YPAVDPLASKSQFMDKILLGERHYSIAQAVREHLERYQELEDMISMMGIEELSPKDRAIV 411
Query: 460 NRGMRLTELLKQGQYV 475
R +L L Q +V
Sbjct: 412 LRARKLQRYLSQPFHV 427
>UniRef50_Q74MS5 Cluster: NEQ263; n=1; Nanoarchaeum equitans|Rep:
NEQ263 - Nanoarchaeum equitans
Length = 416
Score = 94.3 bits (224), Expect = 8e-18
Identities = 98/407 (24%), Positives = 173/407 (42%), Gaps = 30/407 (7%)
Query: 94 VEFSSGLKGMALNLEPDNVGVVVFGNDKLIK------EGDI--VKRTGAIVDVPVGEQIL 145
VE + + G ++LE V+ +K + G+I + R G + V E +
Sbjct: 11 VELENPMLGEVIDLEETKAIVIAAYENKALALLFDYYTGEIKQINRQGNTYKIAVSEDYI 70
Query: 146 GRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 205
G + + G PI G P R G+ +V E + TGI ++D P+ +GQ+
Sbjct: 71 GGIFNGFGEPIKGPKPYPEDYRDINGLAINPYARKVP-NEILYTGISSIDVAHPLLKGQK 129
Query: 206 ELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAG 265
I L ++ + Q N +D+ I+ AIG + +
Sbjct: 130 IAIFSP-----PGLPMERLALQIARNVAKDKT----IIFAAIGVPSDIYKMFIDEFINTK 180
Query: 266 AI-NYTIIVSATASDAAPLQYL-APYSGCAMGEFFR-DNGKHALIIYDDLSKQAVAYRQM 322
AI N I +S +D++P++ + P + E+ + + L++ D++ A A R++
Sbjct: 181 AIMNSAIFISK--ADSSPIEKIYTPRVALTLAEYLAFEKNRDVLVLMLDMTNYADALREI 238
Query: 323 SLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTN 382
S L + P R YP ++ + + ER+ S GS+T +P++ D++ +P
Sbjct: 239 STLRKEIPSRRGYPAYLYTDLASIYERSGLTSK----GSITLIPMLTMPGNDITHVVPDL 294
Query: 383 VISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVA 442
IT+GQ L +L K I P I++ S+SR+ +K K+ A + A+ E
Sbjct: 295 TGYITEGQYVLSQDLHSKNIYPPIDLLKSLSRLAKNGMSKKHKKYADILIKSYAKGLEAR 354
Query: 443 AFAQF-GSDLDAATQQLLNRGMRLT--ELLKQGQYVPMAIEEQVAII 486
A G D + + + L E +KQ Y +IE+ II
Sbjct: 355 DIATIVGEDSLSKEDKAYLKFAELVEKEFIKQDYYEYRSIEKSFEII 401
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 91.5 bits (217), Expect = 5e-17
Identities = 77/317 (24%), Positives = 152/317 (47%), Gaps = 28/317 (8%)
Query: 116 VFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALG-------NPIDGK--GP-IDTK 165
V G ++ I+ G + +P+ E++LGR++D +G +P+ GK P I+T+
Sbjct: 266 VLGREQGIEIGSFARSKNNPYSIPISEKLLGRIIDPVGRILDDPTHPLVGKQYAPMIETE 325
Query: 166 SRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTII 225
S+ K + P+ + ++TGIK +D L+PI G + ++G GKT + + +I
Sbjct: 326 SKQTEKYK---VFPKTQI---LETGIKVIDVLLPIPSGGKTGLLGGAGVGKT-VVVQELI 378
Query: 226 NQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQY 285
N F K D ++ IG++ ++ + + G ++ T + +++ L+
Sbjct: 379 N--TFIKHHDG----VSVFSGIGERIREGHELWEEAKELGFLDKTTFIFGQMNESPGLRL 432
Query: 286 LAPYSGCAMGEFFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 344
+ ++G + E+FR+N GK+ L+ D++ + A ++S LL + P Y +
Sbjct: 433 RSGFTGVKVAEYFRNNLGKNVLLFMDNIFRYMQAGSEVSSLLEKTPSAVGYQPMLVSEIG 492
Query: 345 RLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRP 404
+L ER +D G +T++ + A D + + D I L +L +G+ P
Sbjct: 493 KLQERINSNND----GDITSIQAMYIPADDFTDPAAVAAFAHFDATIILSRQLAAEGLYP 548
Query: 405 AINVGLSVSRVGSAAQT 421
A++ +S S++ S T
Sbjct: 549 AVDPLVSSSKLLSTKFT 565
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 91.5 bits (217), Expect = 5e-17
Identities = 73/310 (23%), Positives = 142/310 (45%), Gaps = 20/310 (6%)
Query: 107 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 166
+ D V ++ + + G +V T ++VPVG+ + +V D LGN ++ K K+
Sbjct: 45 ISEDEVRAILIKTSQRVFIGQVVLNTMKKLEVPVGKSSMNKVFDILGNCLNDKS---AKN 101
Query: 167 RMRVGIKAPGIIPR-VSVR-EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 224
++V I + + + ++ E ++TGIKA+D +PI RG + I+G GKT + + I
Sbjct: 102 LLKVEIDSTITKSKNLEIKNEILETGIKAIDFFIPILRGSKLGILGGAGVGKTVVMKEII 161
Query: 225 INQQRFN--KGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAP 282
N +F + + EKK I++ G++ ++ L ++ ++ T++ + ++A
Sbjct: 162 FNASKFKAPQAQKEKKNTSSIFIGSGERSREGLELYDELKNSKLLDKTVMFISQMNEAPG 221
Query: 283 LQYLAPYSGCAMGEFFRDNGK-HALIIYDDLSKQAVAYRQMSLLLRRPPGREAY----PG 337
+ G E+ RD K + L+ D++ + A ++S L + P Y
Sbjct: 222 ARMSIVPVGITAAEYLRDREKENVLLFIDNIYRFVQASSEVSATLGKKPSLGGYQPTLDT 281
Query: 338 DVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETEL 397
+V ++H RL A GS+T + D++ ++ S D + L +
Sbjct: 282 EVSFVHDRLFLNA--------NGSITTFETVFLPMDDLTDPSAVSIFSHLDSSMVLSRDQ 333
Query: 398 FYKGIRPAIN 407
K I PA +
Sbjct: 334 AAKNIYPAFD 343
>UniRef50_O45827 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 106
Score = 90.6 bits (215), Expect = 9e-17
Identities = 40/50 (80%), Positives = 48/50 (96%)
Query: 267 INYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQA 316
++YTI+VSATASDAAPL++LAPYSGCA+GE F DNGKHALII+DDLSK+A
Sbjct: 1 MDYTIVVSATASDAAPLKFLAPYSGCAIGEHFLDNGKHALIIFDDLSKKA 50
>UniRef50_A6GN32 Cluster: Type III secretion protein; n=1;
Limnobacter sp. MED105|Rep: Type III secretion protein -
Limnobacter sp. MED105
Length = 461
Score = 89.0 bits (211), Expect = 3e-16
Identities = 83/362 (22%), Positives = 161/362 (44%), Gaps = 26/362 (7%)
Query: 126 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG-----KGPIDTKSRMRVGIK-APGIIP 179
G V G + + +L ++D +G +D G + S R I+ AP
Sbjct: 89 GSRVLPLGRAHSIKASDHLLSSLLDGMGRNLDHPNDRRSGVLSVDSDARPVIQVAPPASK 148
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
R V E + T ++ +D L+ +G GQR I GK+ L + +G +
Sbjct: 149 RPPVSESLVTKVRVIDGLLTLGIGQRVGIFAPPGCGKSTLMAQIV-------RGANVDAV 201
Query: 240 LYCIYVAIGQKRSTVAQIV-KRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
++ + +G++ + + + K +TD + V AT+ +A + A ++ ++ E+
Sbjct: 202 VFGL---VGERGRELREFIEKEITDE-IRKKSFFVCATSDRSAIERVRAAFTATSIAEYL 257
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMG 358
RD GK L++ D L++ A A R++ L+ P + + V+ + L+ER+ +
Sbjct: 258 RDQGKSVLLVVDSLTRLARAQRELGLMAGEPATQAGFTPSVYSILPELIERSGRTEQ--- 314
Query: 359 GGSLTALPVIETQAGDV-SAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGS 417
G +TA+ + + + I + S+ DG I L T+L + PAI+ S+SRV
Sbjct: 315 -GDITAVFTVLMEGERIEDDPIASEAKSLLDGHIVLSTKLVERSHFPAIDPLKSLSRVMG 373
Query: 418 AAQTKAMKQVAGSMKLELAQYREVAAFA---QFGSDLDAATQQLLNRGMRLTELLKQGQY 474
+ + +++A ++ + Y+EV ++ D +++N L E KQ +
Sbjct: 374 SVTSVKTQELASLVRRAYSLYQEVELLIRLNEYQPGTDPLVDEVVNIKASLDEWCKQSRS 433
Query: 475 VP 476
P
Sbjct: 434 EP 435
>UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia
cenocepacia PC184|Rep: ATPase FliI/YscN - Burkholderia
cenocepacia PC184
Length = 386
Score = 87.4 bits (207), Expect = 9e-16
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 139 PVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLV 198
PVGE + GRV+D LG P+D GP+ + + P + R + P TG++ +D L+
Sbjct: 27 PVGEALFGRVLDGLGRPLDDLGPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLM 86
Query: 199 PIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIV 258
+G GQR I GK+ L +G + + +G++ V + +
Sbjct: 87 TLGIGQRVGIFAPSGVGKSTLL-------GMIARGAQADVNVIAL---VGERGREVREFI 136
Query: 259 KRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVA 318
+ +I+V +T+ A + + A+ E FRD GK L++ D L++ A A
Sbjct: 137 EHSLSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLVDSLTRFARA 196
Query: 319 YRQMSLLLRRPPGREAYP 336
R++ L PP R ++P
Sbjct: 197 QREVGLASGEPPTRRSFP 214
>UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5;
Bacteria|Rep: V-type ATPase, A subunit - Synechococcus
sp. WH 5701
Length = 621
Score = 84.6 bits (200), Expect = 6e-15
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 18/243 (7%)
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
R+ EPM T + VD+ +PI RG I G GKT L Q ++ D
Sbjct: 226 RLYPEEPMITTQRIVDTFLPIARGGTGCIPGPFGAGKTVL-------QNLISRHSDVDVV 278
Query: 240 LYCIYVAIGQKRSTVAQIVK---RLTD----AGAINYTIIVSATASDAAPLQYLAPYSGC 292
L VA G++ V + + +LTD ++ TII+ T+S + + Y+G
Sbjct: 279 LV---VACGERAGEVVETITEFPKLTDPKTGGSLMDRTIIICNTSSMPVAAREASIYTGL 335
Query: 293 AMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 352
+GE++R G + L+I D S+ A A R+ S L PG +A+P + + ERA
Sbjct: 336 TLGEYYRQMGCNVLLIADSTSRWAQAMRETSGRLEEIPGEDAFPAYLDSAIKGVYERAGI 395
Query: 353 MSDKMGG-GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLS 411
+ G GSLT + + G+ + + +S + L E YK PA+++ LS
Sbjct: 396 IRTNDGSVGSLTMIGTVSPAGGNFEEPVTQSTLSTVKAFLGLSAERAYKRCYPAVDILLS 455
Query: 412 VSR 414
SR
Sbjct: 456 WSR 458
Score = 36.7 bits (81), Expect = 1.6
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 100 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDG 158
LK L + VF + + + GD V++TG ++ V +G +L +V D L NP+ G
Sbjct: 51 LKAEVLRVHGSTADAQVFESTRGVGIGDPVEQTGELLSVKLGPGLLTQVYDGLQNPLAG 109
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 84.2 bits (199), Expect = 8e-15
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 13/296 (4%)
Query: 120 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 179
++ IK DI T +VPVG G + D LGN ++ + P D K ++ V
Sbjct: 57 EEQIKINDIAIDTKESFNVPVGSATNGAIFDVLGNLLN-EHPGDFK-KVEVDSTISTEKH 114
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
S E + TGIK +D VPI +G + I G GKT + + I N R D K
Sbjct: 115 FNSDNEIINTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFNISRQRDSNDVK-- 172
Query: 240 LYCIYVAIGQKRSTVAQIVKRLTDAGAINYT-IIVSATASDAAPLQYLAPYSGCAMGEFF 298
+V G++ ++ L ++ I T + +S + + P G E+
Sbjct: 173 --VFFVGTGERTREAKELYDELVNSSLIKSTSLFISQMNEPSGSRMKILPV-GITAAEYA 229
Query: 299 RDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKM 357
RD+ K L D++ + A R++S L + P Y + S + ER A
Sbjct: 230 RDSEQKDVLFFVDNIYRYLQAGRELSFSLGKKPSEAGYQATLVSDISSVQERLANSKH-- 287
Query: 358 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVS 413
GS+T+ + D++ +++ D + L E+F +G+ PAI+ LS S
Sbjct: 288 --GSITSFQTVFLPMDDLNDPASVAILNHLDSSLVLSREIFAEGLFPAIDPLLSNS 341
>UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase,
alpha/beta subunit, central region; n=1; Geobacter
uraniumreducens Rf4|Rep: H+-transporting two-sector
ATPase, alpha/beta subunit, central region - Geobacter
uraniumreducens Rf4
Length = 524
Score = 81.8 bits (193), Expect = 4e-14
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P+ TG +AVD L P+ RG + G TGKT L +F+ + +YV
Sbjct: 187 PLVTGQRAVDFLFPLARGGAAVFPGGFGTGKTVLEQSVA----KFSAVD------LVVYV 236
Query: 246 AIGQKRSTVAQIVKRL-------TDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
G++ + +A+++ T ++ TI+V T++ + + Y+ M E++
Sbjct: 237 GCGERGNEMAELLDEFAALSDPWTGKPLMDRTIVVVNTSNMPVAAREASIYTAVTMAEYY 296
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAKMSD 355
RD G H L++ D +S+ A A R++S L PG E YP YL SRL ERA +
Sbjct: 297 RDMGYHVLLLADSISRWAEALREISSSLEEMPGEEGYP---TYLASRLSGFFERAGVVET 353
Query: 356 -KMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
G GSL+ + + GD + + + L+T L ++ PAIN
Sbjct: 354 MNCGIGSLSMILSVSPPGGDFTEPVTQACLRTAGAFFMLDTALAHRRHFPAIN 406
>UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9;
Bacteroidales|Rep: V-type ATP synthase subunit B -
Bacteroides thetaiotaomicron
Length = 441
Score = 81.4 bits (192), Expect = 6e-14
Identities = 73/301 (24%), Positives = 128/301 (42%), Gaps = 17/301 (5%)
Query: 98 SGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPID 157
+G + + D+V + VF + I V G + V EQ+ GR +A G+PID
Sbjct: 37 NGKLAQVVKIAGDDVTLQVFEGTEGIPTNAEVVFLGKSPTLKVSEQLAGRFFNAFGDPID 96
Query: 158 GKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT 217
G GP + +G + + R E + TGI +D + GQ+ D
Sbjct: 97 G-GPEIEGQEVEIGGPSVNPVRRKQPSELIATGIAGIDLNNTLVSGQKIPFFADP----- 150
Query: 218 ALAIDTIINQQRFNKG-EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSAT 276
D NQ N E K+ I +G ++AGA++ + T
Sbjct: 151 ----DQPFNQVMANVALRAETDKI--ILGGMGMTNDDYLYFKNVFSNAGALDRIVSFMNT 204
Query: 277 ASDAAPLQYLAPYSGCAMGEFFR-DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 335
+ + L P E+F +N + L++ D++ A A +S + + P +++
Sbjct: 205 TENPPVERLLIPDMALTAAEYFAVNNNEKVLVLLTDMTSYADALAIVSNRMDQIPSKDSM 264
Query: 336 PGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 395
PG ++ +++ E+A + GGS+T + V GD++ +P N IT+GQ+FL
Sbjct: 265 PGSLYSDLAKIYEKAVQFPS---GGSITIIAVTTLSGGDITHAVPDNTGYITEGQLFLRR 321
Query: 396 E 396
+
Sbjct: 322 D 322
>UniRef50_Q74MJ7 Cluster: V-type ATP synthase alpha chain; n=1;
Nanoarchaeum equitans|Rep: V-type ATP synthase alpha
chain - Nanoarchaeum equitans
Length = 570
Score = 80.6 bits (190), Expect = 1e-13
Identities = 59/237 (24%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P TG + +D + PI +G + G +GKT ++NQQ + + IY+
Sbjct: 199 PFITGTRVLDIMFPIAKGGSAAVPGPFGSGKT------VLNQQIAKWADSD----IVIYI 248
Query: 246 AIGQKRSTVAQIVKRL-------TDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
G++ + + ++++ T + TI+++ T++ + + Y G +GE+F
Sbjct: 249 GCGERGNEMTEVLEEFPKLKDPKTGKPLMYRTILIANTSNMPIAAREASIYLGATIGEYF 308
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMG 358
RD G ++ D S+ A A R++S L P E YP + + ER+ ++
Sbjct: 309 RDQGYSVVVNADSTSRWAEALREISSRLGEIPSEEGYPAYLLRKLAEFYERSGRVRTLND 368
Query: 359 -GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR 414
GSLT + + GD S + N + + L+++L YK PAIN +S ++
Sbjct: 369 LEGSLTIIGAVSPPGGDFSEPVTQNTLRLVGALWALDSKLAYKRHYPAINYLISYTK 425
>UniRef50_Q9HNE3 Cluster: V-type ATP synthase alpha chain; n=21;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Halobacterium salinarium (Halobacterium halobium)
Length = 585
Score = 75.4 bits (177), Expect = 4e-12
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 18/231 (7%)
Query: 185 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIY 244
EP+ +G + +D L PI +G I G +GKT + QQ K D +Y
Sbjct: 210 EPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKT-------VTQQSLAKFADAD---IVVY 259
Query: 245 VAIGQKRSTVAQIVK---RLTDAGAIN----YTIIVSATASDAAPLQYLAPYSGCAMGEF 297
+ G++ + + ++++ L D N T +++ T++ + Y+G + E+
Sbjct: 260 IGCGERGNEMTEVIEDFPELPDPQTGNPLMARTTLIANTSNMPVAARESCIYTGITIAEY 319
Query: 298 FRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKM 357
+RD G ++ D S+ A A R++S L PG E YP + S ERA +
Sbjct: 320 YRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGYFENFN 379
Query: 358 G-GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
G GS++ + + GD S + N + I L+++L + PAIN
Sbjct: 380 GTEGSISVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSDLAERRHFPAIN 430
Score = 39.1 bits (87), Expect = 0.30
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 66 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 125
+ +TG + S+ + GL + + GL G + +E D + V+ I
Sbjct: 7 ITDTGEIESVSGPVVTATGLDAQMNDVVYVGDEGLMGEVIEIEGDVTTIQVYEETSGIGP 66
Query: 126 GDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGI 177
G V TG + V +G +L + D + P+D + + + G+ APGI
Sbjct: 67 GQPVDNTGEPLTVDLGPGMLDSIYDGVQRPLDVLED-EMGAFLDRGVDAPGI 117
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 75.4 bits (177), Expect = 4e-12
Identities = 94/401 (23%), Positives = 160/401 (39%), Gaps = 36/401 (8%)
Query: 110 DNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMR 169
+ V V + ++ G V TG + +PVGEQI GR+++ +G+ IDG ++
Sbjct: 57 NTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDGMKELNRDGAYS 116
Query: 170 VGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQR 229
+ P +V+E + TGIK +D L P +G + + G GKT L ++ I N +
Sbjct: 117 IHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINNIAK 176
Query: 230 FNKGED----------EKKKLYCIYVAIGQKRSTVA---QIVKRLTDAGAINYTIIVSAT 276
+ G E L + G R A + K D ++Y + +
Sbjct: 177 KHNGFSVFAGVGERTREGNDLLREMIESGVIRYGEAFKESMEKGHWDLSKVDYNEVEKSQ 236
Query: 277 AS-------DAAPLQYLAPYSGCAMGEFFRDNG-----KHALIIYDDLSKQAVAYRQMSL 324
A+ + + SG + E FRD G + L D++ + A ++S
Sbjct: 237 ATLVFGQMNEPPGARASVALSGLTVAESFRDMGAKSGARDILFFIDNIFRFTQAGSEVSA 296
Query: 325 LLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVI 384
LL R P Y + + ER GS+T++ + A D++ P
Sbjct: 297 LLGRMPSAVGYQPTLATEMGAMQERITSTKT----GSITSVQAVYVPADDLTDPAPATTF 352
Query: 385 SITDGQIFLETELFYKGIRPAINVGLSVSRV-GSAAQTKAMKQVAGSMKLELAQYREVAA 443
+ D L ++ GI PA++ S SR+ + VA +K L + +E+
Sbjct: 353 THLDATTVLSRKITELGIYPAVDPLESTSRILDPHIVGQEHYDVAQRVKQILQRNKELQD 412
Query: 444 FAQF--GSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQ 482
+L A + ++NR R+ L Q P + EQ
Sbjct: 413 IISILGMEELSDADRLVVNRARRVQRFLSQ----PFTVAEQ 449
>UniRef50_A7B5P4 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus gnavus ATCC 29149
Length = 591
Score = 74.5 bits (175), Expect = 7e-12
Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 24/233 (10%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P+ TG + +D++ PI +G I G TGKT + Q + K D IY+
Sbjct: 213 PLVTGQRIIDTMFPIAKGGTAAIPGGFGTGKT-------MTQHQIAKWSDAD---IIIYI 262
Query: 246 AIGQKRSTVAQIVKRL-------TDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
G++ + + Q+++ T ++ T +++ T++ + + Y+G + E++
Sbjct: 263 GCGERGNEMTQVLEEFGELIDPKTGNPLMDRTTLIANTSNMPVAAREASIYTGLTLAEYY 322
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAKMSD 355
RD G I+ D S+ A A R++S L P E +P YL SRL ERA M +
Sbjct: 323 RDMGYDVAIMADSTSRWAEALRELSGRLEEMPAEEGFPA---YLASRLSGFYERAGMMHN 379
Query: 356 KMG-GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
G GS+T + + Q GD S + N L+ L Y PAI+
Sbjct: 380 LNGTDGSVTIIGAVSPQGGDFSEPVTQNTKRFVRCFWGLDKSLAYARHFPAIH 432
>UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Aeropyrum pernix
Length = 597
Score = 74.5 bits (175), Expect = 7e-12
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 26/241 (10%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P+ TG++ +D+ P+ +G + G TGKT T+ + ++++ IY+
Sbjct: 217 PLITGVRIIDTFFPMAKGGTGAVPGGFGTGKTV----TLHSLAQWSEAR------VVIYI 266
Query: 246 AIGQKRSTVAQIVKRL-------TDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
G++ + + ++++R T ++ T++++ T++ + + Y G + E++
Sbjct: 267 GCGERGNEMTEVLERFPQYKDPWTGKPLMDRTVLIANTSNMPVAAREASIYVGITIAEYY 326
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE------RAAK 352
RD G L++ D S+ A A R+++ L P E YP YL SRL E R
Sbjct: 327 RDMGYDVLLVADSTSRWAEALREIAGRLEEMPAEEGYPS---YLASRLAEFYERAGRVKA 383
Query: 353 MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV 412
+ GS+T + + GD S + ++ L+T+L Y PAIN +S
Sbjct: 384 LGSPERSGSVTVVGAVSPPGGDFSEPVTSHTTRFIRVFWALDTKLAYSRHYPAINWLMSY 443
Query: 413 S 413
S
Sbjct: 444 S 444
Score = 40.3 bits (90), Expect = 0.13
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGNDKLIKEGDI 128
G ++ I + G+ Q EMV L G + D + V+ + +K G+
Sbjct: 5 GSIVRISGPLVVAEGMSGAQMYEMVYVGEDRLIGEITRIRGDRAFIQVYESTSGLKPGEP 64
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGNPI----DGKGPIDTKSRMRV--GIKAPGIIPR 180
V TGA + V +G +LG + D + P+ + +D + RM V GI+AP +PR
Sbjct: 65 VVGTGAPLSVELGPGLLGTIYDGVQRPLPIIAEKVAEVDPRRRMFVERGIQAPP-LPR 121
>UniRef50_A5ZRD0 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 589
Score = 72.9 bits (171), Expect = 2e-11
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P+ TG + +D+L PI +G + G TGKT + Q + K D IY+
Sbjct: 211 PLVTGQRILDTLFPIAKGGTAAVPGGFGTGKT-------MTQHQIAKWSDAD---IIIYI 260
Query: 246 AIGQKRSTVAQIVK---RLTDAGAINY----TIIVSATASDAAPLQYLAPYSGCAMGEFF 298
G++ + + Q+++ +L D + N T +++ T++ + + Y+G + E++
Sbjct: 261 GCGERGNEMTQVLEDFSKLIDPKSGNLMMDRTTLIANTSNMPVAAREASIYTGVTLAEYY 320
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMG 358
RD G I+ D S+ A A R++S L P E +P + S ERA M + G
Sbjct: 321 RDMGYDVAIMADSTSRWAEALRELSGRLEEMPAEEGFPAYLASKLSAFYERAGMMQNLNG 380
Query: 359 -GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
GS++ + + Q GD S + N L+ L Y PAI+
Sbjct: 381 TEGSVSIIGAVSPQGGDFSEPVTQNTKRFVRCFWGLDKALAYARHFPAIH 430
>UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza
sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp.
indica (Rice)
Length = 483
Score = 72.5 bits (170), Expect = 3e-11
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 105 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVP--VGEQILGRVVDALGNPIDGKGPI 162
LN +PD V+ D+ K I++ + + + V I G + PI PI
Sbjct: 195 LNQQPDCA--VILNADR--KSSVILEAARSQIPIAFLVDSTIPGESHKRITYPIPANDPI 250
Query: 163 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT 214
R + GI+ R SV EPMQTG+KAVDSLVPIGRG+RELIIG R+T
Sbjct: 251 QFVYLFRHSVTKTGILERKSVHEPMQTGLKAVDSLVPIGRGRRELIIGGRKT 302
>UniRef50_A6AXF1 Cluster: VcsN2; n=7; Vibrio|Rep: VcsN2 - Vibrio
parahaemolyticus AQ3810
Length = 420
Score = 70.9 bits (166), Expect = 8e-11
Identities = 85/358 (23%), Positives = 149/358 (41%), Gaps = 27/358 (7%)
Query: 123 IKEGDIVKRTGAIVDVPVGEQIL-GRVVDALGNPIDGKGPIDTKSR---MRVGIKAPGII 178
++ G V+ T P+ E L G+V++ G + G + + + ++ +
Sbjct: 62 VQRGGKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQ 121
Query: 179 PRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKK 238
R + T +K +D L IG GQR + GKT T ++ N D
Sbjct: 122 MRAPIETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKT-----TTVSIMANNMDAD--- 173
Query: 239 KLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYL-APYSGCAMGEF 297
I+ IG++ V + ++ I +I + +T S+A PL+ + + ++ +
Sbjct: 174 --VVIFAMIGERAREVVEFLEGEIGPEVIRKSITIVST-SEANPLEKVRSGLVAVSIARY 230
Query: 298 FRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKM 357
+ + GK ++ +D L++ A A +L P + P V SRL+E
Sbjct: 231 YMEQGKKVVLYFDSLTRFARA----QAMLDGTPIKGGIPIGVSLALSRLVESCGNSIQGS 286
Query: 358 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGS 417
G T L IE + D I V S+ DG + T + G PAI+V S SR+ +
Sbjct: 287 VTGIFTVL--IEKEIDDDP--IAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQN 342
Query: 418 AAQTKAMKQVAGSMKLELAQYREVAAFAQFG---SDLDAATQQLLNRGMRLTELLKQG 472
Q K +++ +K + +Y V + G D T + + R ++ E LKQG
Sbjct: 343 KVQEKYYVRLSEKIKDMVYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQG 400
>UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC
3.6.3.14) (V-type ATPase subunit B) [Contains: Mka atpB
intein]; n=8; cellular organisms|Rep: V-type ATP
synthase beta chain (EC 3.6.3.14) (V-type ATPase subunit
B) [Contains: Mka atpB intein] - Methanopyrus kandleri
Length = 990
Score = 70.9 bits (166), Expect = 8e-11
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 10/243 (4%)
Query: 82 VYGLKNIQAEEMVEFSSGL----KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIV 136
V G++ + E+VE + +G L D V VF G L V+ TG +
Sbjct: 25 VEGVEGAKYGEVVEVETPTGEVRRGQVLEARRDAAVVQVFEGTSGLDTTSTKVRFTGETL 84
Query: 137 DVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDS 196
+PV +LGR+++ G PIDG I + + + R + +QTGI A+D
Sbjct: 85 RIPVSTDLLGRILNGRGEPIDGGPEIVPEDELDIHGAPINPAARKYPSDFIQTGISAIDG 144
Query: 197 LVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQ 256
+ + RGQ+ I LA I +Q GE+E + ++ A+G A
Sbjct: 145 MNTLVRGQKLPIFSGSGLPHNELAAQ--IARQATVPGEEE--EFAVVFAAMGITHEEAAF 200
Query: 257 IVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR-DNGKHALIIYDDLSKQ 315
+ + GA++ +++ A D + + + P + E+ +N H L+I D++
Sbjct: 201 FRREFEETGALDRAVLILNLADDPSMERIITPRIALTVAEYLAFENDMHVLVILTDMTNY 260
Query: 316 AVA 318
A
Sbjct: 261 CFA 263
Score = 59.7 bits (138), Expect = 2e-07
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 304 HALIIYDDL-SKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSL 362
H L++ + + + A R++S PGR YPG ++ + + ERA + + G S+
Sbjct: 765 HTLVVENGIITSNCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGCIRGRKG--SI 822
Query: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 415
T +P++ D++ IP IT+GQI L +L +GI P I+V S+SR+
Sbjct: 823 TQMPILTMPHDDITHPIPDLTGYITEGQIVLSRDLHRRGIYPPIDVLPSLSRL 875
>UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19;
Bacteria|Rep: V-type ATP synthase beta chain - Chlamydia
muridarum
Length = 438
Score = 70.1 bits (164), Expect = 1e-10
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 19/293 (6%)
Query: 105 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 164
L + V + VFG + GD V G ++V G+ +LGR + G PID + +
Sbjct: 44 LRFDAKKVTLQVFGGTSGLSTGDKVVFLGRPMEVVYGDSLLGRRFNGTGKPIDNE---EI 100
Query: 165 KSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 222
+ I P P R+ RE ++T I +D + + Q+ I AL +
Sbjct: 101 CFGEPIPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNALLM- 159
Query: 223 TIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAP 282
R D I +G + V+ G + ++ A DA
Sbjct: 160 ------RIAAQTDAD---IVIIGGMGLTFVDYSFFVEESQRLGFADKCVMFIHKAVDAPV 210
Query: 283 LQYLAPYSGCAMGEFFR-DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 341
L P A E F + K+ L++ D++ A A +++++ + + P YPG
Sbjct: 211 ECVLIPDMALACAERFALEQKKNVLVLLTDMTAFADALKEIAITMDQIPANRGYPGS--- 267
Query: 342 LHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 394
L+S L R K D GGS+T + V D++ +P N IT+GQ +L+
Sbjct: 268 LYSDLAVRYEKAVDIAQGGSITLISVTTMPGDDITHPVPDNTGFITEGQFYLK 320
>UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;
Bacteria|Rep: V-type ATP synthase alpha chain 2 -
Treponema pallidum
Length = 605
Score = 69.7 bits (163), Expect = 2e-10
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 24/238 (10%)
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
+++V EP+ TG +A+D P+ +G I G TGKT + Q K D
Sbjct: 212 KLAVCEPLVTGQRAIDVFFPLSKGGTAAIPGGFGTGKT-------MTQHAVAKWCDAD-- 262
Query: 240 LYCIYVAIGQKRSTVAQIVKRL-------TDAGAINYTIIVSATASDAAPLQYLAPYSGC 292
+Y+ G++ + + ++ T + TI+++ T++ + ++ YSG
Sbjct: 263 -IIVYIGCGERGNEMTDVLSEFPKLIDPRTGRSLMERTILIANTSNMPVSAREVSLYSGI 321
Query: 293 AMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LER 349
+ E++RD G H I+ D S+ A A R++S + P E +P YL +RL ER
Sbjct: 322 TLAEYYRDMGMHVAIMADSTSRWAEALRELSGRMEEMPAEEGFPA---YLPTRLAEFYER 378
Query: 350 AAKMSDKMG-GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 406
A ++ + GS++ + + GD S + + L+ EL + PAI
Sbjct: 379 AGRVETCVAREGSVSIIGAVSPLGGDFSEPVTQHTKRFIRCFWALDRELAHARHYPAI 436
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 68.5 bits (160), Expect = 4e-10
Identities = 74/307 (24%), Positives = 130/307 (42%), Gaps = 16/307 (5%)
Query: 181 VSVREPM-QTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG------ 233
+ + P+ +TGIK VD L P +G + + G GKT L ++ I N + G
Sbjct: 201 IDITAPLFETGIKVVDVLTPYKKGGKVGLFGGAGVGKTVLIMELIRNLAYSHNGLSLFSG 260
Query: 234 -EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGC 292
+ ++ +YV + + + A + +V +D ++ +
Sbjct: 261 IGERSREANDLYVEMQESGIILLAEDSSNPYFSAESKVALVFGQMNDTPGARFRVANAAL 320
Query: 293 AMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAA 351
M E+FRD NG+ L+ D++ + A ++S LL R P Y + L ER
Sbjct: 321 TMAEYFRDVNGQDLLVFMDNIFRFVQAGSELSTLLGRMPSAVGYQPTLATEMGTLQERIV 380
Query: 352 KMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLS 411
GS+T++ + A D++ P + + D L L KGI PA++ S
Sbjct: 381 PTL----FGSITSIQAVYVPADDITDPAPVAIFTHLDAITVLSRGLAAKGIYPAVDPLAS 436
Query: 412 VSRVGSAAQT-KAMKQVAGSMKLELAQYREVA-AFAQFGSD-LDAATQQLLNRGMRLTEL 468
S+ +A+ + VA S+ L +Y+E+ A G D L + + + RG ++
Sbjct: 437 TSKALTASFVGERHYNVAQSIIQCLNRYKELQDLIAILGLDELSESDRLSVLRGRKIERF 496
Query: 469 LKQGQYV 475
L Q +V
Sbjct: 497 LSQPFFV 503
>UniRef50_Q5JIR3 Cluster: V-type ATP synthase alpha chain; n=12;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Pyrococcus kodakaraensis (Thermococcus kodakaraensis)
Length = 585
Score = 68.5 bits (160), Expect = 4e-10
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 18/284 (6%)
Query: 133 GAIVDVPV-GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 191
G IV++ G+ + V+ + P + R V +K P ++ P+ TG
Sbjct: 154 GEIVEIAEEGDYTVEEVIAKVKKPDGTIEELKMYHRWPVRVKRP-YKQKLPPEVPLITGQ 212
Query: 192 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKR 251
+ +D+ +G I G +GKT + Q + K D + +Y G +
Sbjct: 213 RTIDTFFSQAKGGTAAIPGPFGSGKT-------VTQHQLAKWSDAQVVVYIGCGERGNEM 265
Query: 252 STVAQIVKRLTDAGA----INYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALI 307
+ V + +L D + T++++ T++ + + Y+G + E+FRD G +
Sbjct: 266 TDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDQGYDVAL 325
Query: 308 IYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM----SDKMGGGSLT 363
+ D S+ A A R++S L PG E YP + + ERA ++ SD+ GS++
Sbjct: 326 MADSTSRWAEALREISGRLEEMPGEEGYPAYLASKIAEFYERAGRVITLGSDER-VGSVS 384
Query: 364 ALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
+ + GD S + N + + L+ +L + PAIN
Sbjct: 385 VIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAIN 428
Score = 40.3 bits (90), Expect = 0.13
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKEGDI 128
GR++ + + G+K + E+V GL G + LE D + V+ I+ G+
Sbjct: 2 GRIIRVTGPLVVADGMKGAKMYEVVRVGEIGLIGEIIRLEGDKAVIQVYEETAGIRPGEP 61
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGNPID 157
V+ TG+ + V +G +L + D + P++
Sbjct: 62 VEGTGSSLSVELGPGLLTAMYDGIQRPLE 90
>UniRef50_Q8A875 Cluster: V-type ATP synthase subunit A; n=9;
Bacteroidales|Rep: V-type ATP synthase subunit A -
Bacteroides thetaiotaomicron
Length = 585
Score = 67.7 bits (158), Expect = 7e-10
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 18/229 (7%)
Query: 187 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVA 246
++TG++ +D+L PI G I G TGKT L Q +K + I A
Sbjct: 212 LETGVRVIDTLNPIVEGGTGFIPGPFGTGKTVL-------QHAISKQAEAD---IVIIAA 261
Query: 247 IGQKRSTVAQIVKRL-------TDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR 299
G++ + V +I T + TII++ T++ + + Y+ ++ E++R
Sbjct: 262 CGERANEVVEIFTEFPELVDPHTGRKLMERTIIIANTSNMPVAAREASVYTAMSLAEYYR 321
Query: 300 DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMS-DKMG 358
G L++ D S+ A A R+MS + PG +A+P D+ + S RA + +
Sbjct: 322 SMGLKVLLMADSTSRWAQALREMSNRMEELPGPDAFPMDISAIISNFYGRAGYVKLNNDE 381
Query: 359 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
GS+T + + G++ + N + LE + K PA+N
Sbjct: 382 TGSITFIGTVSPAGGNLKEPVTENTKKVARCFYALEQDRADKKRYPAVN 430
>UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11;
Archaea|Rep: V-type ATP synthase alpha chain -
Sulfolobus tokodaii
Length = 592
Score = 66.9 bits (156), Expect = 1e-09
Identities = 70/270 (25%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 148 VVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQREL 207
VVD G+ I P+ + V I P ++ EP+ TGI+ +D++ PI +G
Sbjct: 177 VVDMNGDEI----PVKMYQKWPVRIPRP-YKEKLEPVEPLLTGIRVLDTVFPIAKGGTAA 231
Query: 208 IIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGA- 266
I G +GKT + Q K K +Y G + + + +L D
Sbjct: 232 IPGPFGSGKT-------VTLQSLAKWSAAKVVIYVGCGERGNEMTDELRSFPKLKDPWTG 284
Query: 267 ---INYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMS 323
+ TI+V+ T++ + + Y G M E+FRD G L++ D S+ A A R +
Sbjct: 285 KPLLLRTILVANTSNMPVAARESSIYVGVTMAEYFRDQGYDVLLVADSTSRWAEALRDLG 344
Query: 324 LLLRRPPGREAYPGDVFYLHSRLLE------RAAKMSDKMGGGSLTALPVIETQAGDVSA 377
+ P E +P YL SRL E R + + GS+T + GD +
Sbjct: 345 GRMEEMPAEEGFPS---YLPSRLAEYYERAGRVIALGNPERYGSVTIASAVSPPGGDFTE 401
Query: 378 YIPTNVISITDGQIFLETELFYKGIRPAIN 407
+ +N + L+ L PAIN
Sbjct: 402 PVTSNTLRFVRVFWPLDVSLAQARHYPAIN 431
Score = 51.2 bits (117), Expect = 7e-05
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKEGDI 128
GRV+ + + G++ Q E+V S L G +E D + V+ + +K GD
Sbjct: 5 GRVVRVNGPLVIADGMREAQMFEVVYVSDLKLVGEITRIEGDRAFIQVYESTDGVKPGDK 64
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGI 177
V R+GA + V +G ++G++ D L P+D + + G+ P +
Sbjct: 65 VYRSGAPLSVELGPGLIGKIYDGLQRPLDSIAKVSNSPFVARGVSIPAL 113
>UniRef50_UPI00005F655A Cluster: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase; n=1;
Yersinia pestis Angola|Rep: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase -
Yersinia pestis Angola
Length = 389
Score = 66.5 bits (155), Expect = 2e-09
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 248 GQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGC-AMGEFFRDNGKHAL 306
G +S + ++ R T A ++V A +D +PL + C A+ ++RD G L
Sbjct: 170 GVGKSVLLGMITRYTQAD-----VVVVAAPADESPLMRIKATELCHAIATYYRDKGHDVL 224
Query: 307 IIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALP 366
++ D L++ A+A R+++L L PP + YP F + RL E A S G G++TA+
Sbjct: 225 LLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNSS---GNGTMTAIY 281
Query: 367 VIETQAGDVSAYIPTNVISITDGQI 391
+ +AG A + IS Q+
Sbjct: 282 TVLAEAGHYPAIDISQSISRCMSQV 306
Score = 57.6 bits (133), Expect = 8e-07
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 140 VGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP 199
+G+ LGRV++ LG P+DGKG + + ++ + + R +V P+ G+ A++ L+
Sbjct: 97 IGDSWLGRVINGLGEPLDGKGQLGGSTPLQQQLPQIHPLQRRAVDTPLDVGVNAINGLLT 156
Query: 200 IGRGQRELIIGDRQTGKTAL 219
IG+GQR ++ GK+ L
Sbjct: 157 IGKGQRVGLMAGSGVGKSVL 176
>UniRef50_Q3J9F3 Cluster: Sodium-transporting two-sector ATPase;
n=1; Nitrosococcus oceani ATCC 19707|Rep:
Sodium-transporting two-sector ATPase - Nitrosococcus
oceani (strain ATCC 19707 / NCIMB 11848)
Length = 591
Score = 66.5 bits (155), Expect = 2e-09
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P+ TG + +D+ P+ +G + + G GKT + QQ+ + + IYV
Sbjct: 208 PLMTGQRILDTFFPLLKGGKAAVPGPFGAGKTMV-------QQQIARWSNAD---IVIYV 257
Query: 246 AIGQKRSTVAQIVK---RLTDA----GAINYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
G++ + + +++ LTD + T++V+ T++ + + Y G +GE++
Sbjct: 258 GCGERGNELVEVLDSFPELTDPHTGRSLMERTLLVANTSNMPVVAREASLYVGVTLGEYY 317
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAKMSD 355
RD G +I+ D S+ A A R+++ L + P E YP YL SRL ERA ++
Sbjct: 318 RDQGYDVVIVADSTSRWAEALREVAGRLGQMPVEEGYPA---YLASRLAAFYERAGRV-Q 373
Query: 356 KMGG--GSLTALPVIETQAGDVSAYIPTNVISI 386
+GG GS+T + + GD S + ++ I
Sbjct: 374 TLGGSVGSVTLIGAVSPPGGDFSEPVTSHTKEI 406
>UniRef50_Q9RWG8 Cluster: V-type ATP synthase alpha chain; n=61;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Deinococcus radiodurans
Length = 582
Score = 64.9 bits (151), Expect = 5e-09
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P TG++ +D + P+ G I G +GKT + QQ K + +YV
Sbjct: 207 PFLTGMRILDVMFPLVMGGAAAIPGPFGSGKT-------VTQQSVAKYGNAD---IVVYV 256
Query: 246 AIGQKRSTVAQIVKRL-------TDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
G++ + + ++ T ++ TI+++ T++ + + Y+G + E+F
Sbjct: 257 GCGERGNEMTDVLVEFPELEDPKTGGPLMHRTILIANTSNMPVAAREASVYTGVTLAEYF 316
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMG 358
RD G ++ D S+ A A R++S L P E YP + + ERA + G
Sbjct: 317 RDQGYSVSLMADSTSRWAEALREISSRLEEMPAEEGYPPYLGAKLAAFYERAGAVKTLAG 376
Query: 359 -GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
G+++ + + GD+S + + IT L+ L + PAIN
Sbjct: 377 EDGAVSVIGAVSPAGGDMSEPVTQATLRITGAFWRLDAGLARRRHFPAIN 426
>UniRef50_Q822J8 Cluster: V-type ATP synthase alpha chain; n=15;
Bacteria|Rep: V-type ATP synthase alpha chain -
Chlamydophila caviae
Length = 591
Score = 64.1 bits (149), Expect = 9e-09
Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 28/258 (10%)
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
+V E M GI+ +D+ +P+ +G G GKT L Q +K
Sbjct: 212 KVPCHEIMDVGIRILDTQIPVLKGGTFCTPGPFGAGKTVL-------QHHLSKYAAVDIV 264
Query: 240 LYCIYVAIGQKRSTVAQIVKR---LTDA----GAINYTIIVSATASDAAPLQYLAPYSGC 292
+ C A G++ V ++++ LTD ++ T I+ T+S + + Y G
Sbjct: 265 ILC---ACGERAGEVVEVLQEFPHLTDPHTGESLMHRTCIICNTSSMPVAARESSIYLGI 321
Query: 293 AMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LER 349
+ E++R G H L++ D S+ A A R++S L PG EA+P YL SR+ ER
Sbjct: 322 TVAEYYRQMGLHVLLLADSTSRWAQALREISGRLEEIPGEEAFPA---YLASRIAAFYER 378
Query: 350 AAKMSDKMGG-GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELF----YKGIRP 404
+ K G GSLT + G+ + +S+ L Y I P
Sbjct: 379 GGAVRMKDGSEGSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDP 438
Query: 405 AINVGLSVSRVGSAAQTK 422
I+ + +VG + K
Sbjct: 439 MISWSKYLDQVGDILENK 456
>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
Candidatus Carsonella ruddii|Rep: ATP synthase beta
subunit - Carsonella ruddii
Length = 139
Score = 62.5 bits (145), Expect = 3e-08
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 112 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 171
V V+ FG+ +K IV TG + PVG+ LGR+++ LGNPID KG I + ++ +
Sbjct: 49 VRVIAFGDTNGLKRNMIVLDTGKPILTPVGDCTLGRILNILGNPIDNKGNIFSSKKVPIH 108
Query: 172 IKAPGIIPRVSVREPMQTGIKAVDSLVP 199
P ++ + ++TGIK +D L P
Sbjct: 109 KLPPKFSDQIFNNDILETGIKIIDLLCP 136
>UniRef50_Q6L1S7 Cluster: A1AO H+ ATPase subunit A; n=1; Picrophilus
torridus|Rep: A1AO H+ ATPase subunit A - Picrophilus
torridus
Length = 922
Score = 62.5 bits (145), Expect = 3e-08
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 215 GKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRL-------TDAGAI 267
G A+ + + Q + +K D +YV G++ + + +I+ T +
Sbjct: 561 GYGAILLHNTVIQHQLSKWSDSD---IVVYVGCGERGNEMTEILSTFPELMDPKTGKPIM 617
Query: 268 NYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 327
T++++ T++ + + Y+G + E++RD G + ++ D S+ A A R++S L
Sbjct: 618 QRTVLIANTSNMPVAAREASIYTGVTIAEYYRDMGYNVALMADSTSRWAEALREISGRLE 677
Query: 328 RPPGREAYPGDVFYLHSRLLERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVI 384
PG E YP + S ER+ +++ GS+T + + GD+S + N +
Sbjct: 678 EMPGEEGYPAYLGRRISEFYERSGNAQIIAEDQRTGSVTLIGAVSPPGGDLSDPVVQNTL 737
Query: 385 SITDGQIFLETELFYKGIRPAIN 407
+T L+ L + P+IN
Sbjct: 738 RVTRVFWALDASLASRRHFPSIN 760
>UniRef50_Q97CQ0 Cluster: V-type ATP synthase alpha chain (EC
3.6.3.14) (V-type ATPase subunit A) [Contains: Tvo atpA
intein (Tvo VMA intein)]; n=2; Thermoplasma|Rep: V-type
ATP synthase alpha chain (EC 3.6.3.14) (V-type ATPase
subunit A) [Contains: Tvo atpA intein (Tvo VMA intein)]
- Thermoplasma volcanium
Length = 776
Score = 62.1 bits (144), Expect = 4e-08
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 215 GKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTD-----AGA--I 267
G+ L + + Q + K D +Y+ G++ + + +I+ + +G +
Sbjct: 413 GEGLLVLHNTVIQHQLAKWSDAN---IVVYIGCGERGNEMTEILTTFPELKDPVSGQPLM 469
Query: 268 NYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 327
+ T++++ T++ + + Y+G + E++RD G ++ D S+ A A R++S L
Sbjct: 470 DRTVLIANTSNMPVAAREASIYTGITIAEYYRDMGYDVALMADSTSRWAEALREISGRLE 529
Query: 328 RPPGREAYPGDVFYLHSRLLERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVI 384
PG E YP + S ER+ + +S + GS+T + + GD+S + N +
Sbjct: 530 EMPGEEGYPAYLGRRISEFYERSGRARLVSPEDRFGSITVIGAVSPPGGDISEPVSQNTL 589
Query: 385 SITDGQIFLETELFYKGIRPAIN 407
+T L+ L + P+IN
Sbjct: 590 RVTRVFWALDASLANRRHFPSIN 612
>UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to
ENSANGP00000024697; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000024697 - Nasonia
vitripennis
Length = 1018
Score = 61.3 bits (142), Expect = 6e-08
Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 28/245 (11%)
Query: 185 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIY 244
+P+ TG + +D+L P +G + G GKTALA Q K + +Y
Sbjct: 623 QPLLTGQRILDALFPSAQGASVALPGAFGCGKTALA-------QALAKYSNSD---LVVY 672
Query: 245 VAIGQKRSTVAQIVK-------RLTDA--GAINYTIIVSATASDAAPLQYLAPYSGCAMG 295
G++ + +A++++ ++ D + T +V+ T++ + + Y+G ++
Sbjct: 673 AGCGERGNEMAELLRDFGRLEVQVDDVRESIMKRTTLVANTSNMPVAAREASVYTGLSLA 732
Query: 296 EFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAK 352
E+FRD G + ++ D S+ A A R++ L P YP YL +RL ERA +
Sbjct: 733 EYFRDQGYNVALMADSTSRWAEALREIGARLAEMPAEAGYPA---YLGARLASFYERAGR 789
Query: 353 ---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVG 409
+ + GS++ + + AGD S + + + L+ L PA++
Sbjct: 790 VRCLGNPRREGSVSIIGAVSPPAGDFSDPVTNGTLGVVQAFWALDKRLAESKHFPAVDWL 849
Query: 410 LSVSR 414
S SR
Sbjct: 850 KSYSR 854
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 60.9 bits (141), Expect = 9e-08
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 115 VVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKA 174
+ G+ + +K G V TGA + VPVG+ LGR++D LGNPID GPI + R + +A
Sbjct: 53 IAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHREA 112
Query: 175 PGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGK 216
P + E ++ G + + +G + ++ R G+
Sbjct: 113 PSYADQAGGNELLKNGHQGDRPWSAVRQGGKVSLVRRRGRGQ 154
>UniRef50_Q6BRM0 Cluster: Debaryomyces hansenii chromosome D of
strain CBS767 of Debaryomyces hansenii; n=2;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome D of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 999
Score = 60.9 bits (141), Expect = 9e-08
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 270 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRP 329
T +V+ T++ + + Y+G + E+FRD GKH +I D S+ A A R++S L
Sbjct: 698 TTLVANTSNMPVAAREASIYTGITLAEYFRDQGKHVSMIADSSSRWAEALRELSGRLGEM 757
Query: 330 PGREAYPGDVFYLHSRLLERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISI 386
P + +P + + ERA K + GS++ + + GD S + T + I
Sbjct: 758 PADQGFPAYLGAKLASFYERAGKAVALGSPDRIGSVSIVAAVSPAGGDFSDPVTTATLGI 817
Query: 387 TDGQIFLETELFYKGIRPAINVGLSVSR 414
T L+ +L + P++N +S S+
Sbjct: 818 TQVFWGLDKKLAQRKHFPSVNTSISYSK 845
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 60.1 bits (139), Expect = 2e-07
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 106 NLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDT 164
+L D V + G + L + D+ + G I +P G+ I GR+ + +G IDG T
Sbjct: 50 HLGEDTVRTIAMEGTEGLQRGMDVTDKEGPI-SMPTGDGIKGRLFNVVGEAIDGIENPKT 108
Query: 165 KSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 224
R+ + AP + E + TGIK +D L P +G + + G GKT L + I
Sbjct: 109 DRRVSIHRAAPTFDQLTTETEVLFTGIKVIDLLEPYAKGGKIGLFGGAGVGKTVLIQELI 168
Query: 225 INQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINY 269
N + G ++ +G++ +++ + ++G +NY
Sbjct: 169 NNIAKAYAG-------VSVFAGVGERTREGNDLLREMIESGIVNY 206
Score = 47.6 bits (108), Expect = 9e-04
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 290 SGCAMGEFFRDN-----GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 344
SG ++ E+FRD G L D++ + A ++S LL R P Y +
Sbjct: 254 SGLSIAEYFRDGDGTGKGNDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 313
Query: 345 RLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRP 404
+ ER S K G S+T++ I A D++ P + D L +L GI P
Sbjct: 314 VMQERIT--STKRG--SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRKLASLGIYP 369
Query: 405 AINVGLSVSRVGSA-AQTKAMKQVAGSMKLELAQYREVA-AFAQFGSD-LDAATQQLLNR 461
A++ S SR+ +A + +A +K L +Y E+ A G D L ++++N+
Sbjct: 370 AVDPLDSTSRILTADILGEEHYNIAQRVKETLQRYNELQDIIAILGLDELSDDDRKVVNK 429
Query: 462 GMRLTELLKQGQYV 475
R+ L Q +V
Sbjct: 430 ARRIQRFLSQPFHV 443
>UniRef50_A3LP04 Cluster: Vacuolar H+-ATPase V1 sector, subunit A;
n=7; Saccharomycetaceae|Rep: Vacuolar H+-ATPase V1
sector, subunit A - Pichia stipitis (Yeast)
Length = 1065
Score = 60.1 bits (139), Expect = 2e-07
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 270 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRP 329
T +V+ T++ + + Y+G + E+FRD GK+ +I D S+ A A R++S L
Sbjct: 764 TTLVANTSNMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEM 823
Query: 330 PGREAYPGDVFYLHSRLLERAAKMSDKMGG----GSLTALPVIETQAGDVSAYIPTNVIS 385
P + +P + + ERA K S +G GS++ + + GD S + T+ +
Sbjct: 824 PADQGFPAYLGAKLASFYERAGK-SVALGSPERLGSVSIVAAVSPAGGDFSDPVTTSTLG 882
Query: 386 ITDGQIFLETELFYKGIRPAINVGLSVSR 414
IT L+ +L + P+IN +S S+
Sbjct: 883 ITQVFWGLDKKLAQRKHFPSINTSVSYSK 911
>UniRef50_O57728 Cluster: V-type ATP synthase alpha chain (EC
3.6.3.14) (V-type ATPase subunit A) [Contains:
Endonuclease PI-Pho2 (EC 3.1.-.-) (Pho atpA intein) (Pho
VMA intein)]; n=1; Pyrococcus horikoshii|Rep: V-type ATP
synthase alpha chain (EC 3.6.3.14) (V-type ATPase
subunit A) [Contains: Endonuclease PI-Pho2 (EC 3.1.-.-)
(Pho atpA intein) (Pho VMA intein)] - Pyrococcus
horikoshii
Length = 964
Score = 60.1 bits (139), Expect = 2e-07
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 13/203 (6%)
Query: 215 GKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGA----INYT 270
G + + Q + K D + +Y G + + V + +L D + T
Sbjct: 608 GNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERT 667
Query: 271 IIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 330
++++ T++ + + Y+G + E+FRD G ++ D S+ A A R++S L P
Sbjct: 668 VLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMP 727
Query: 331 GREAYPGDVFYLHSRLLE------RAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVI 384
G E YP YL S+L E R + GS++ + + GD S + N +
Sbjct: 728 GEEGYPA---YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTL 784
Query: 385 SITDGQIFLETELFYKGIRPAIN 407
+ L+ +L + PAIN
Sbjct: 785 RVVKVFWALDADLARRRHFPAIN 807
Score = 40.7 bits (91), Expect = 0.098
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKEGDI 128
GR++ + + G+K + E+V GL G + LE D + V+ ++ G+
Sbjct: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGNPID 157
V TGA + V +G +L + D + P++
Sbjct: 65 VVGTGASLSVELGPGLLTSIYDGIQRPLE 93
>UniRef50_Q9UXU7 Cluster: V-type ATP synthase alpha chain (EC
3.6.3.14) (V-type ATPase subunit A) [Contains: Pab atpA
intein (Pab VMA intein)]; n=3; cellular organisms|Rep:
V-type ATP synthase alpha chain (EC 3.6.3.14) (V-type
ATPase subunit A) [Contains: Pab atpA intein (Pab VMA
intein)] - Pyrococcus abyssi
Length = 1017
Score = 60.1 bits (139), Expect = 2e-07
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 13/203 (6%)
Query: 215 GKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGA----INYT 270
G + + Q + K D + +Y G + + V + +L D + T
Sbjct: 661 GNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERT 720
Query: 271 IIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 330
++++ T++ + + Y+G + E+FRD G ++ D S+ A A R++S L P
Sbjct: 721 VLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMP 780
Query: 331 GREAYPGDVFYLHSRLLE------RAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVI 384
G E YP YL S+L E R + GS++ + + GD S + N +
Sbjct: 781 GEEGYPA---YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTL 837
Query: 385 SITDGQIFLETELFYKGIRPAIN 407
+ L+ +L + PAIN
Sbjct: 838 RVVKVFWALDADLARRRHFPAIN 860
Score = 39.1 bits (87), Expect = 0.30
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 70 GRVLSIGDGIARVYGLKNIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKEGDI 128
GR++ + + G+K + E+V GL G + LE D + V+ ++ G+
Sbjct: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
Query: 129 VKRTGAIVDVPVGEQILGRVVDALGNPID 157
V TG+ + V +G +L + D + P++
Sbjct: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLE 93
>UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=209; cellular organisms|Rep: Vacuolar ATP synthase
catalytic subunit A - Homo sapiens (Human)
Length = 617
Score = 60.1 bits (139), Expect = 2e-07
Identities = 58/253 (22%), Positives = 113/253 (44%), Gaps = 28/253 (11%)
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
+ ++ P+ TG + +D+L P +G I G GKT ++ Q +K +
Sbjct: 217 VTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVIS-------QSLSKYSNS 269
Query: 237 KKKLYCIYVAIGQKRSTVAQIVKRLTDA---------GAINYTIIVSATASDAAPLQYLA 287
IYV G++ + ++++++ + + T +V+ T++ + +
Sbjct: 270 D---VIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREAS 326
Query: 288 PYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL- 346
Y+G + E+FRD G H ++ D S+ A A R++S L P YP YL +RL
Sbjct: 327 IYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA---YLGARLA 383
Query: 347 --LERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG 401
ERA + + + GS++ + + GD S + + + I L+ +L +
Sbjct: 384 SFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRK 443
Query: 402 IRPAINVGLSVSR 414
P++N +S S+
Sbjct: 444 HFPSVNWLISYSK 456
Score = 36.7 bits (81), Expect = 1.6
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 65 DLEET-GRVLSIGDGIARVYGLKNIQAEEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKL 122
D E T G V + + + E+V S L G + LE D + V+
Sbjct: 13 DKESTFGYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSG 72
Query: 123 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 156
+ GD V RTG + V +G I+G + D + P+
Sbjct: 73 VSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPL 106
>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
synthase; n=8; cellular organisms|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 59.3 bits (137), Expect = 3e-07
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 112 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 171
V + G+ +K G IV G + VPVGE LGR+++ LG ID KG + +K +
Sbjct: 52 VRTIAMGSSDGLKRGLIVNDLGHYIKVPVGEPTLGRILNVLGETIDNKGLLKSKRNTNIE 111
Query: 172 I-----KAPGIIPRVSVREPMQTGIKAVDSLVPIGR 202
P I + S +E ++TGIK +D + P +
Sbjct: 112 YWEIHRSPPNYIDQSSSKEILETGIKVIDLICPFSK 147
>UniRef50_A5DXZ0 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=8; Saccharomycetales|Rep: Vacuolar ATP synthase
catalytic subunit A - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 1034
Score = 58.8 bits (136), Expect = 3e-07
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 270 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRP 329
T +V+ T++ + + Y+G + E+FRD GK+ +I D S+ A A R++S L
Sbjct: 733 TTLVANTSNMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEM 792
Query: 330 PGREAYPGDVFYLHSRLLERAAKMSDKMGG----GSLTALPVIETQAGDVSAYIPTNVIS 385
P + +P + + ERA K + +G GS++ + + GD S + T +
Sbjct: 793 PADQGFPAYLGAKLASFYERAGK-ATALGSPDRVGSVSVVAAVSPAGGDFSDPVTTATLG 851
Query: 386 ITDGQIFLETELFYKGIRPAINVGLSVSR 414
IT L+ +L + P+IN +S S+
Sbjct: 852 ITQVFWGLDKKLAQRKHFPSINTSVSYSK 880
>UniRef50_P17255 Cluster: Vacuolar ATP synthase catalytic subunit A
(EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump
subunit A) [Contains: Endonuclease PI-SceI (EC 3.1.-.-)
(VMA1-derived endonuclease) (VDE) (Sce VMA intein)];
n=14; Ascomycota|Rep: Vacuolar ATP synthase catalytic
subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar
proton pump subunit A) [Contains: Endonuclease PI-SceI
(EC 3.1.-.-) (VMA1-derived endonuclease) (VDE) (Sce VMA
intein)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 1071
Score = 58.4 bits (135), Expect = 5e-07
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 270 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRP 329
T +V+ T++ + + Y+G + E+FRD GK+ +I D S+ A A R++S L
Sbjct: 770 TTLVANTSNMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEM 829
Query: 330 PGREAYPGDVFYLHSRLLERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISI 386
P + +P + + ERA K + GS++ + + GD S + T + I
Sbjct: 830 PADQGFPAYLGAKLASFYERAGKAVALGSPDRTGSVSIVAAVSPAGGDFSDPVTTATLGI 889
Query: 387 TDGQIFLETELFYKGIRPAINVGLSVSR 414
T L+ +L + P+IN +S S+
Sbjct: 890 TQVFWGLDKKLAQRKHFPSINTSVSYSK 917
>UniRef50_Q874G5 Cluster: Vacuolar membrane ATPase subunit a; n=7;
Saccharomycetaceae|Rep: Vacuolar membrane ATPase subunit
a - Saccharomyces castellii (Yeast)
Length = 1101
Score = 57.6 bits (133), Expect = 8e-07
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 270 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRP 329
T +V+ T++ + + Y+G + E+FRD GK +I D S+ A A R++S L
Sbjct: 815 TTLVANTSNMPVAAREASIYTGITLAEYFRDQGKDVSMIADSSSRWAEALREISGRLGEM 874
Query: 330 PGREAYPGDVFYLHSRLLERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISI 386
P + +P + + ERA K + GS++ + + GD S + T + I
Sbjct: 875 PADQGFPAYLGAKLASFYERAGKAVALGSPDRIGSVSIVAAVSPAGGDFSDPVTTATLGI 934
Query: 387 TDGQIFLETELFYKGIRPAINVGLSVSRVGSA 418
T L+ +L + P+IN +S S+ +A
Sbjct: 935 TQVFWGLDKKLAQRKHFPSINTSVSYSKYTNA 966
>UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1;
Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase
subunit beta - Lentisphaera araneosa HTCC2155
Length = 161
Score = 57.2 bits (132), Expect = 1e-06
Identities = 31/100 (31%), Positives = 55/100 (55%)
Query: 103 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPI 162
+A +L V + + + + G +V TGA + VPVG+++LGR ++ LG+PID K +
Sbjct: 51 VAQHLGEGVVRTIALDSTEGLHRGAVVTDTGAGLKVPVGDEVLGRAMNLLGDPIDNKPVV 110
Query: 163 DTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGR 202
++ + +AP + + E + TGIK + S + I R
Sbjct: 111 ESSDEWEIHREAPAFADQDTGTEVLVTGIKVLTSSLLIVR 150
>UniRef50_A7BUC4 Cluster: V-type ATPase subunit A; n=1; Beggiatoa
sp. PS|Rep: V-type ATPase subunit A - Beggiatoa sp. PS
Length = 595
Score = 56.8 bits (131), Expect = 1e-06
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 27/248 (10%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P+ TG + +D+ P+ +G + I G GKT L R++ + IYV
Sbjct: 212 PLLTGQRILDTFFPLLKGGKGAIPGPFGAGKTMLQHQIA----RWSNAD------IVIYV 261
Query: 246 AIGQKRSTVAQIVK---RLTDA----GAINYTIIVSATASDAAPLQYLAPYSGCAMGEFF 298
G++ + + I++ LTD + T++++ T++ + + Y G + E++
Sbjct: 262 GCGERGNELVDILETFPELTDPHTGRSLMERTLLIANTSNMPVVAREASIYVGVTIAEYY 321
Query: 299 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAKMSD 355
RD G +++ D S+ A A R++ L + P E YP YL SRL ERA +++
Sbjct: 322 RDLGYDVVMVADSTSRWAEALREVGGRLGQMPVEEGYPA---YLASRLAAFYERAGRVT- 377
Query: 356 KMGG--GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVS 413
+G S+T + + GD S + ++ I L EL P+I+ S S
Sbjct: 378 TLGNQKASVTLIGAVSPPGGDFSEPVTSHTKEIVQTFWALSKELADARHYPSIDWNDSFS 437
Query: 414 -RVGSAAQ 420
VG A Q
Sbjct: 438 DYVGIAQQ 445
Score = 36.3 bits (80), Expect = 2.1
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 67 EETGRVLSIGDGIARVYGLKNIQAEEMVEFSS-GLKGMALNLEPDNVGVVVFGNDKLIKE 125
E TG ++ I I + L ++ E V L G + L+ + V V+ + + ++
Sbjct: 3 ELTGEIIRINGPIVTIQ-LPGVRNGEQVRVGQLNLMGEVIRLDGEQATVQVYESTESLRP 61
Query: 126 GDIVKRTGAIVDVPVGEQILGRVVDALGNPID 157
G+I + V +G +LG++ D + P+D
Sbjct: 62 GEIAHALRHPLSVELGPGLLGKIFDGVQRPLD 93
>UniRef50_Q4S553 Cluster: Chromosome 6 SCAF14737, whole genome
shotgun sequence; n=7; Deuterostomia|Rep: Chromosome 6
SCAF14737, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 757
Score = 54.8 bits (126), Expect = 6e-06
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
+ ++ P+ TG + +D+L P +G I G GKT ++ Q +K +
Sbjct: 255 VTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGASGCGKTVIS-------QSLSKYSNS 307
Query: 237 KKKLYCIYVAIGQKRSTVAQIVKRLTDA---------GAINYTIIVSATASDAAPLQYLA 287
IYV G++ + ++++++ + + T +V+ T++ + +
Sbjct: 308 D---VIIYVGCGERGNEMSEVLRDFPELTMEVDGKTESIMKRTALVANTSNMPVAAREAS 364
Query: 288 PYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL- 346
Y+G + E+FRD G + ++ D S+ A A R++S L P YP YL +RL
Sbjct: 365 IYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA---YLGARLA 421
Query: 347 --LERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 390
ERA + + + GS++ + + GD S + + + I Q
Sbjct: 422 SFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVQ 470
>UniRef50_UPI0000382621 Cluster: COG0056: F0F1-type ATP synthase,
alpha subunit; n=1; Magnetospirillum magnetotacticum
MS-1|Rep: COG0056: F0F1-type ATP synthase, alpha subunit
- Magnetospirillum magnetotacticum MS-1
Length = 80
Score = 53.6 bits (123), Expect = 1e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 465 LTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTI 524
+TELLKQ QY PM++ +Q +++ RG+L ++ SKI +FE ++ H L+ I
Sbjct: 1 MTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEI 60
Query: 525 AKDGQITPESDAS 537
+ G E + S
Sbjct: 61 NQSGGYYDEIEGS 73
>UniRef50_Q7QUD4 Cluster: GLP_59_34747_32780; n=2; Giardia
intestinalis|Rep: GLP_59_34747_32780 - Giardia lamblia
ATCC 50803
Length = 655
Score = 53.2 bits (122), Expect = 2e-05
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA--------IDTIINQQRFNKGEDEK 237
P+ TG + +D L P+ G I G GKT ++ D I+ +G +
Sbjct: 231 PLITGQRTLDGLFPLAIGATAAIPGGFGCGKTVVSQSISKYGNTDVIVYIGCGERGNEMA 290
Query: 238 KKLYCI-YVAIGQKRSTVA----QIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGC 292
+ L + K+ + Q +K + + + T++V+ T++ + + Y+G
Sbjct: 291 EILTDFPEMTFEAKKRVIGPSGQQEIKTVV-SDIFSRTVLVANTSNMPVAAREASIYTGI 349
Query: 293 AMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 352
+ EFFRD G + ++ D S+ A A R++S L PG YP D+ S ERA +
Sbjct: 350 TISEFFRDQGYNVTLLADSTSRWAEALREISGRLGGIPGEGGYPADLTSKLSHFYERAGR 409
Query: 353 M 353
+
Sbjct: 410 V 410
Score = 36.3 bits (80), Expect = 2.1
Identities = 18/78 (23%), Positives = 39/78 (50%)
Query: 100 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 159
L G + L+ D+ + V+ + ++ D+V ++G ++ V +G +L + D + P++
Sbjct: 41 LIGEIIQLKGDSAVIQVYEDTSGLEVNDVVYKSGRLLSVHLGPGLLSSIYDGIQRPLEKI 100
Query: 160 GPIDTKSRMRVGIKAPGI 177
I + GI AP +
Sbjct: 101 AQITNSHFIPRGISAPAL 118
>UniRef50_A6QSP8 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=1; Ajellomyces capsulatus NAm1|Rep: Vacuolar ATP
synthase catalytic subunit A - Ajellomyces capsulatus
NAm1
Length = 636
Score = 53.2 bits (122), Expect = 2e-05
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 270 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRP 329
T +++ T++ + + Y+G + E+FRD GK+ ++ D S+ A A R++S L
Sbjct: 333 TCLIANTSNMPVAAREASIYTGITVAEYFRDQGKNVAMMADSSSRWAEALREISGRLGEM 392
Query: 330 PGREAYPGDVFYLHSRLLERAAKMSDKMGG----GSLTALPVIETQAGDVSAYIPTNVIS 385
P + +P + + ERA +S +G GS++ + + GD S + ++ +
Sbjct: 393 PADQGFPAYLGAKLASFYERAG-LSIALGSPERKGSVSIVGAVSPPGGDFSDPVTSSTLG 451
Query: 386 ITDGQIFLETELFYKGIRPAINVGLSVSR 414
I L+ +L + P+IN +S S+
Sbjct: 452 IVQVFWGLDKKLAQRKHFPSINTSVSYSK 480
>UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP
synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 52.8 bits (121), Expect = 2e-05
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 112 VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVG 171
V + G + G V G + VPVG LGR+V+ LG PID KGP++ K ++
Sbjct: 52 VRTIAMGASDGLSRGLSVLDLGHGIKVPVGISTLGRIVNVLGCPIDMKGPLNNKDGSKIE 111
Query: 172 IK-----APGIIPRVSVREPMQTGIKAVDSLVPIGR 202
+ APG +++ ++TGIK +D + P +
Sbjct: 112 HREIHRSAPGYEEQLNSCTILETGIKVIDLICPFSK 147
>UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=1; Burkholderia dolosa AUO158|Rep:
Flagellar biosynthesis/type III secretory pathway ATPase
- Burkholderia dolosa AUO158
Length = 390
Score = 51.6 bits (118), Expect = 5e-05
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 101 KGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI---- 156
+ + D + + G+ ++ TG + V +G+ +LG VVD+ G +
Sbjct: 48 RAQVIGFRQDAAVLSLLGSAAGCSRESVLVPTGRPLTVRLGDDLLGAVVDSTGRIVGRIA 107
Query: 157 DGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGK 216
D + + + P I R+ +R TG++A+D L+ G GQR I + TGK
Sbjct: 108 DARPERAADTWAALEAPPPSIDNRLPIRTRFLTGVRAIDGLMTCGIGQRVGIFAEAGTGK 167
Query: 217 TALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSAT 276
T L+ I D + IG++ V ++V+ L+ T+IV +T
Sbjct: 168 TTLSKMLI----------DHASADVSVIGLIGERGREVTELVEELSTFARRERTVIVFST 217
Query: 277 ASDA 280
SDA
Sbjct: 218 -SDA 220
>UniRef50_UPI00015B5329 Cluster: PREDICTED: similar to GA14484-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA14484-PA - Nasonia vitripennis
Length = 341
Score = 50.8 bits (116), Expect = 9e-05
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 102 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 160
G L + V VF G + + + TG I+ PV E +LGRV + G PID
Sbjct: 68 GQVLEVSGSKAVVQVFEGTSGIDAKNTHCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGP 127
Query: 161 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 205
PI + + + + R+ E +QTG+ A+D + I RGQ+
Sbjct: 128 PILAEDYLDIQGQPINPWSRIYPEEMIQTGLSAIDVMNSIARGQK 172
>UniRef50_A6BBJ5 Cluster: Probable ATP synthase YscN; n=1; Vibrio
parahaemolyticus AQ3810|Rep: Probable ATP synthase YscN
- Vibrio parahaemolyticus AQ3810
Length = 157
Score = 50.8 bits (116), Expect = 9e-05
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 143 QILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGR 202
Q+LG+++D LG P DG + + V AP + R + +P+ G++++D L+ G
Sbjct: 35 QVLGKILDGLGRPFDGAQSQEPSAWYPVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGE 94
Query: 203 GQRELIIGDRQTGKTAL 219
GQR I GK+ L
Sbjct: 95 GQRMGIFAAAGGGKSTL 111
>UniRef50_Q6BRW4 Cluster: Debaryomyces hansenii chromosome D of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome D of strain CBS767 of Debaryomyces hansenii
- Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 80
Score = 47.2 bits (107), Expect = 0.001
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 3 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAAP 62
++SAR A R A ++ + + + + ST E+S+ILEERI G +
Sbjct: 1 MLSARPVLRSAARSVAAVSRNLRVKQARPTQLAARCYASTKAAPTEVSSILEERIRGVSD 60
Query: 63 KADLEETGRVLSIG 76
+A+L ETGRVLS+G
Sbjct: 61 EANLNETGRVLSVG 74
>UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n=1;
Lentisphaera araneosa HTCC2155|Rep: Transcription
termination factor Rho - Lentisphaera araneosa HTCC2155
Length = 613
Score = 46.4 bits (105), Expect = 0.002
Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 28/266 (10%)
Query: 156 IDGKGPIDTKSRMRVGIKAPGIIP-RVSVR-EPMQTGIKAVDSLVPIGRGQRELIIGDRQ 213
I+G+ P + K+++ P R+ + EP ++ +D +VP+G GQR LI+ +
Sbjct: 317 INGEDPKEKKNKIPFESLTPDFPEYRMHMETEPTNHSMRVLDLVVPVGAGQRGLIVAPPR 376
Query: 214 TGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIV 273
TGKT L + +I N N + + I + I ++ V + + + ++
Sbjct: 377 TGKTVL-MQSIANSIATNNPD-----FHLIVLLIDERPEEVTDMKRNVKGE-------VI 423
Query: 274 SATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGRE 333
S+T + + ++GK+ +++ D +++ A AY + +P +
Sbjct: 424 SSTFDEPPTRHVQVAEMVIEKAKRMVEHGKNVVVLLDSITRLARAYNTV-----QPHSGK 478
Query: 334 AYPG--DVFYLH--SRLLERAAKMSDKMGGGSLTALPVIETQAGD-VSAYIPTNVISITD 388
G D LH R A ++ + GGSLT L G + I +
Sbjct: 479 ILSGGVDANALHKPKRFFGAARRIQE---GGSLTILATALVDTGSKMDEVIFEEFKGTGN 535
Query: 389 GQIFLETELFYKGIRPAINVGLSVSR 414
+I L+ + K I PAIN+ S +R
Sbjct: 536 MEICLDRGMIDKRIFPAINIEKSGAR 561
>UniRef50_A0D9M8 Cluster: Chromosome undetermined scaffold_42, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_42,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 603
Score = 46.0 bits (104), Expect = 0.003
Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 22/248 (8%)
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
I+ ++ + P+ TGI+ +D P G+ I G + G +++ K +
Sbjct: 211 ILEKLDINTPIITGIRVLDGFFPAFLGETCCISGPAECGYLEISL-------ALTKQSNT 263
Query: 237 KKKLYCIYVAIGQKRSTVA----QIVKRLTDAG-AINY-TIIVSATASDAAPLQYLAPYS 290
+ +Y G + ++V ++ L D ++N T +V+ + + +Y + Y+
Sbjct: 264 QCMIYIGCAESGNEMASVLSEYPELKIELKDKEESVNQRTCLVANPSQKSLGKRYASLYA 323
Query: 291 GCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERA 350
G E+FRD G + +I D SK ++S + + YP + S + +RA
Sbjct: 324 GTTFAEYFRDMGYNVGLIADQTSKWVETQTEISNRIGEILQEQEYPTFLASKLSPIYQRA 383
Query: 351 AKMSDKMG---GGSLTALPVIETQAGDVSAYIPTNVISITDGQIF--LETELFYKGIRPA 405
++ + GS+T V+ T+ D P + ++ + ++F L+ +L K PA
Sbjct: 384 GRVKCRGSPNREGSITLFGVVSTE--DFKD--PITIATLMNTKVFWGLDYQLKIKKHFPA 439
Query: 406 INVGLSVS 413
+N +S S
Sbjct: 440 VNWEISYS 447
>UniRef50_Q8F7C5 Cluster: Transcription termination factor rho;
n=54; cellular organisms|Rep: Transcription termination
factor rho - Leptospira interrogans
Length = 482
Score = 44.8 bits (101), Expect = 0.006
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 22/245 (8%)
Query: 185 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIY 244
+P + +D + PIG+GQR LI+ +TGKT L + I N N E I
Sbjct: 216 DPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL-MQNIANAITSNHPE-----CSLIV 269
Query: 245 VAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKH 304
+ I ++ V + + + +VS+T + A + ++GK
Sbjct: 270 LLIDERPEEVTDMARHVRGE-------VVSSTFDEPAQRHVQVAEMVIEKAKRLVEHGKD 322
Query: 305 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPG--DVFYLHS-RLLERAAKMSDKMGGGS 361
+I+ D +++ A AY Q+ P + G D LH + AA+ ++ G +
Sbjct: 323 VVILLDSITRLARAYNQVI-----PTSGKILSGGVDSNALHKPKRFFGAARNIEEGGSLT 377
Query: 362 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 421
+ A +I+T + I + +I L+ +L K I PAI++ S +R T
Sbjct: 378 IIATALIDT-GSKMDEVIFEEFKGTGNMEIHLDRKLSDKRIFPAIDINKSGTRKEELLIT 436
Query: 422 KAMKQ 426
K + Q
Sbjct: 437 KDVLQ 441
>UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP
synthase beta chain - Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)
Length = 129
Score = 44.4 bits (100), Expect = 0.008
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 123 IKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAP 175
+K G V G + +P+GE+I GRV + +GN IDG G ++ R+ + P
Sbjct: 72 LKRGQDVFSLGTTISMPIGEEINGRVFNVVGNTIDGLGDLNNSKRISIHRNPP 124
>UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3;
Corynebacterium|Rep: Transcription termination factor -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 762
Score = 43.6 bits (98), Expect = 0.014
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 28/266 (10%)
Query: 156 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI---KAVDSLVPIGRGQRELIIGDR 212
++G +T++R G P + P +R + I + +D ++PIG+GQR LI+
Sbjct: 452 VNGLPAEETRNRPEFGKLTP-LYPNQRLRLETEQKILTTRVIDLIMPIGKGQRALIVSPP 510
Query: 213 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 272
+ GKT + + I N N E Y + V + ++ V + + ++N +I
Sbjct: 511 KAGKTTI-LQNIANAISTNNPE-----CYLMVVLVDERPEEVTDMQR------SVNGEVI 558
Query: 273 VSATASDAAPLQYLAPYS-GCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPG 331
++ D P ++ A + + G+ +++ D +++ AY S R
Sbjct: 559 --SSTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILS 616
Query: 332 REAYPGDVFYLHSRLLERAAKMSDKMGGGSLT--ALPVIET-QAGDVSAYIPTNVISITD 388
+ Y R L A + + GGSLT A ++ET AGD + +
Sbjct: 617 -GGVDSNALYPPKRFLGAARNIEN---GGSLTIIATAMVETGSAGDTVIF--EEFKGTGN 670
Query: 389 GQIFLETELFYKGIRPAINVGLSVSR 414
++ L+ ++ + + PA++V S +R
Sbjct: 671 AELKLDRKISERRVFPAVDVNPSGTR 696
>UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 765
Score = 43.6 bits (98), Expect = 0.014
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 192 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKR 251
+ VD PIG+GQR LI+ +TGKT L D I N N E +Y I + I ++
Sbjct: 507 RVVDLFAPIGKGQRALIVAQPKTGKTILMKD-IANAIAANHPE-----VYMIMLLIDERP 560
Query: 252 STVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR--DNGKHALIIY 309
V + A ++N +I S P + +G + + R + G +I
Sbjct: 561 EEVTDM------ARSVNAEVIASTFDE---PAERHVKIAGIVLEKAKRLVECGHDVVIFL 611
Query: 310 DDLSKQAVAYRQMSLLLRRPPGREAYPG--DVFYLHS-RLLERAAKMSDKMGGGSLTALP 366
D +++ A AY +S P + G D LH + AA+ + G ++ A
Sbjct: 612 DSITRLARAYNTVS-----PASGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIIATA 666
Query: 367 VIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR 414
+I+T + I + ++ L+ L K I PA+N+ S +R
Sbjct: 667 LIDT-GSKMDEVIFEEFKGTGNMELQLDRNLSNKRIFPAVNITASSTR 713
>UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n=3;
Bacteria|Rep: Transcription termination factor Rho -
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 426
Score = 42.3 bits (95), Expect = 0.032
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYV 245
P + + +D L PIGRGQR LI+ + GKT L + I N N+ + + I +
Sbjct: 160 PDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTL-LKKIANAVLKNEPD-----IKVIVL 213
Query: 246 AIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGC-AMGEFFRDNGKH 304
I ++ V + + A I A+ D P ++ + + G H
Sbjct: 214 LIDERPEEVTDFRESVQGAEVI-------ASTFDEPPQNHIRVAEFVHERAKRIVEEGGH 266
Query: 305 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPG---DVFYLHSRLLERAAKMSDKMGGGS 361
+I+ D +++ A A + L+ P GR G Y R L A + GGGS
Sbjct: 267 VMILLDSITRLARA----NNLVTPPTGRTLSGGLDSAALYFPKRFLGAARNI---RGGGS 319
Query: 362 LTALPVIETQAGD-VSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR 414
LT L + G + I + ++ L L + I PAI++ S +R
Sbjct: 320 LTILATALVETGSRMDDVIFEEFKGTGNMELHLSRRLEERRIFPAIDILKSGTR 373
>UniRef50_Q8XIB4 Cluster: Transcription terminator Rho factor; n=4;
Clostridium|Rep: Transcription terminator Rho factor -
Clostridium perfringens
Length = 479
Score = 41.9 bits (94), Expect = 0.043
Identities = 86/351 (24%), Positives = 141/351 (40%), Gaps = 46/351 (13%)
Query: 86 KNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAI--VDVPVGEQ 143
K Q ++M+ S KG+ L+ +N G + N L E DI I + G++
Sbjct: 95 KKEQLKDMISSSDSAKGILEILDNNNFGFLRCRN-YLTSEDDIYVSPSQIRRFGLRTGDE 153
Query: 144 ILGRV-VDALGNP---------IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTG--- 190
+ G+V + G ++G+ P R + P I P+ +R + G
Sbjct: 154 VQGKVRIPKDGEKFKALLYVERVNGESPEKAVGRKKFEELTP-IYPKERLRLETENGRDL 212
Query: 191 -IKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQ 249
+ +D + PIG+GQR +I+ + GKT L + I Q +K E K I + I +
Sbjct: 213 SSRLMDIICPIGKGQRGMIVAPPKAGKTTL-LKRI--AQNISKNNPEVK---LIVLLIDE 266
Query: 250 KRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR--DNGKHALI 307
+ V +KR D I T D P Q A S + R + G+ +I
Sbjct: 267 RPEEVTD-MKRSIDGEVIYSTF-------DEEP-QNHAKVSSIVLERAKRMVEQGRDVVI 317
Query: 308 IYDDLSKQAVAYRQMSLLLRRPPGREAYPG---DVFYLHSRLLERAAKMSDKMGGGSLTA 364
+ D L++ + AY L P GR G + + A + + GGSLT
Sbjct: 318 LMDSLTRLSRAYN----LTVTPSGRTLSGGLDPGALIMPKKFFGAARNLEE---GGSLTI 370
Query: 365 LPVIETQAGD-VSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR 414
L G + I + ++ L+ +L + I PAI++ S +R
Sbjct: 371 LATSLVDTGSRMDDMIFEEFKGTGNMEVHLDRKLQERRIFPAIDIYKSGTR 421
>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
Clostridiales|Rep: Transcription termination factor Rho
- Clostridium phytofermentans ISDg
Length = 650
Score = 41.9 bits (94), Expect = 0.043
Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 25/266 (9%)
Query: 156 IDGKGPIDTKSRMRVGIKAPGIIP--RVSVREP-MQTGIKAVDSLVPIGRGQRELIIGDR 212
I+G P + R + P I P R+ + P Q ++ VD + PIG+GQR +I+
Sbjct: 348 INGLHPSEAVKRKKFEDLTP-IFPNERIHLETPGCQVAMRMVDLISPIGKGQRGMIVSQP 406
Query: 213 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 272
+TGKT L + + N E ++ I + I ++ V I K + G + +
Sbjct: 407 KTGKTTL-LKQVAKAITRNHPE-----MHLIILLIDERPEEVTDI-KESIEGGNVE---V 456
Query: 273 VSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 332
+ +T + + ++ K +I+ D +++ A AY L + GR
Sbjct: 457 IYSTFDELPENHKRVSEMVIERAKRLVEHKKDVVILLDSITRLARAYN----LTVQASGR 512
Query: 333 EAYPG-DVFYLH--SRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDG 389
G D LH + A M + GGSLT L + G + T
Sbjct: 513 TLSGGLDPAALHMPKKFFGAARNMRE---GGSLTILATALVETGSRMDDVVFEEFKGTGN 569
Query: 390 -QIFLETELFYKGIRPAINVGLSVSR 414
++ L+ L K I PAI++ S +R
Sbjct: 570 MELVLDRNLSEKRIFPAIDLPKSSTR 595
>UniRef50_Q24FC1 Cluster: ATP synthase alpha subunit,
nucleotide-binding domain protein; n=2; Tetrahymena
thermophila SB210|Rep: ATP synthase alpha subunit,
nucleotide-binding domain protein - Tetrahymena
thermophila SB210
Length = 607
Score = 41.9 bits (94), Expect = 0.043
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 180 RVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKK 239
R++ + + TG +VD PI +G ++ GD TGK+ LA + I N
Sbjct: 212 RLTSKRQLYTGNISVDMTQPICQGNFVILNGDLNTGKSHLASEMIKQNCALNPN------ 265
Query: 240 LYCIYVAIGQKRSTVAQIVKRL-TDAGAINYTIIVSATASDAAPL--QYLAPYSGCAMG- 295
+ + + Q ST +++ L ++ + N IIVS + A + +YL+P++ +
Sbjct: 266 --TVGIFVTQHFSTAEKVLSELQSNEHSKNNFIIVSPQNEETAGMAEKYLSPFTALHLAR 323
Query: 296 EFFRDNGKHALIIYDDL 312
+ ++ K +IIYD++
Sbjct: 324 KIQQEQSKDVIIIYDNI 340
>UniRef50_P45835 Cluster: Transcription termination factor rho;
n=87; Bacteria|Rep: Transcription termination factor rho
- Mycobacterium leprae
Length = 610
Score = 41.9 bits (94), Expect = 0.043
Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 22/263 (8%)
Query: 156 IDGKGPIDTKSRMRVGIKAPGIIPRVSVR---EPMQTGIKAVDSLVPIGRGQRELIIGDR 212
I+G D K R G P + P +R P + + +D ++PIG+GQR LI+
Sbjct: 305 INGGSVEDAKKRPEFGKLTP-LYPNQRLRLETTPDRLTTRVIDLIMPIGKGQRALIVSPP 363
Query: 213 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 272
+ GKT + D I N N E + + V + ++ V ++R I T
Sbjct: 364 KAGKTTILQD-IANAITRNNLE-----CHLMVVLVDERPEEVTD-MQRSVKGEVIASTF- 415
Query: 273 VSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 332
SD + LA + + GK +++ D +++ AY S R
Sbjct: 416 -DRPPSDHTSVAELA----IERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILS- 469
Query: 333 EAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISIT-DGQI 391
Y R L A + + GGSLT + + G + T + ++
Sbjct: 470 GGVDSTALYPPKRFLGAARNIEE---GGSLTIIATAMVETGSTGDMVIFEEFKGTGNAEL 526
Query: 392 FLETELFYKGIRPAINVGLSVSR 414
L+ ++ + + PA++V S +R
Sbjct: 527 KLDRKIAERRVFPAVDVNPSGTR 549
>UniRef50_P52157 Cluster: Transcription termination factor rho;
n=14; Bacteria|Rep: Transcription termination factor rho
- Streptomyces lividans
Length = 707
Score = 39.9 bits (89), Expect = 0.17
Identities = 63/267 (23%), Positives = 104/267 (38%), Gaps = 30/267 (11%)
Query: 156 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI---KAVDSLVPIGRGQRELIIGDR 212
++G P + R P + P+ +R G+ + +D + PIG+GQR LI+
Sbjct: 402 VNGMAPEHGRGRPEFNKLTP-LYPQDRLRLETDPGVLTTRIIDLVAPIGKGQRGLIVAPP 460
Query: 213 QTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTII 272
+TGKT + + I N N E + + V + ++ V ++R I+ T
Sbjct: 461 KTGKT-MIMQAIANAITHNNPE-----CHLMVVLVDERPEEVTD-MQRSVKGEVISSTF- 512
Query: 273 VSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 332
A D + LA + E G +++ D +++ AY L P
Sbjct: 513 -DRPAEDHTTVAELAIERAKRLVEL----GHDVVVLLDSITRLGRAYN-----LAAPASG 562
Query: 333 EAYPGDV----FYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGD-VSAYIPTNVISIT 387
G V Y R A + D GGSLT L G + I
Sbjct: 563 RILSGGVDSTALYPPKRFFGAARNIED---GGSLTILATALVDTGSRMDEVIFEEFKGTG 619
Query: 388 DGQIFLETELFYKGIRPAINVGLSVSR 414
+ ++ L+ +L K I PA++V S +R
Sbjct: 620 NAELKLDRKLADKRIFPAVDVDASGTR 646
>UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n=1;
Planctomyces maris DSM 8797|Rep: Transcription
termination factor Rho - Planctomyces maris DSM 8797
Length = 543
Score = 39.5 bits (88), Expect = 0.23
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 186 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 222
PM ++ +D L PIG+GQR L++ +TGKT L D
Sbjct: 277 PMPITMRIMDMLTPIGKGQRALVVAPPRTGKTMLLQD 313
>UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_808, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 106
Score = 39.1 bits (87), Expect = 0.30
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 88 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 123
I A E+VEF G + LNLE +NVGVV+ G+ +I
Sbjct: 71 IMASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106
>UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 762
Score = 38.7 bits (86), Expect = 0.40
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 164 TKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT 223
TKS + + ++ P S RE Q + VP Q I G Q G +A D
Sbjct: 596 TKSLIHMFLRGPWPFDPESTREAHQLHLNVERIRVPETVFQPSAIAGLDQAGLVEIAAD- 654
Query: 224 IINQQRFNKGEDEKKKLYCIYVAIG 248
I+NQQRF+ G++ + L +++ G
Sbjct: 655 IVNQQRFSSGQERARLLRDVFITGG 679
>UniRef50_A1U7T6 Cluster: Putative uncharacterized protein
precursor; n=1; Marinobacter aquaeolei VT8|Rep: Putative
uncharacterized protein precursor - Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 454
Score = 38.3 bits (85), Expect = 0.52
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 58 LGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVF 117
+G PKA+L E+G+ +S+ +A + I A E VE + MA L N G VV
Sbjct: 60 IGQIPKAELPESGKAVSLAAWLAHTFRSGTILALEEVE-QRREETMAYWLCIVNDGQVVI 118
Query: 118 GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGN 154
G D LI++ + V +G +G + +A N
Sbjct: 119 GTDTLIEDWETVVTMAESTLEALGADNVGYIGEAARN 155
>UniRef50_A0E2E9 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 610
Score = 38.3 bits (85), Expect = 0.52
Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 28/230 (12%)
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
I+ ++ P+ TGI+ +D L P +G G ++ +I + ++ +
Sbjct: 218 IVEKLEGNTPLLTGIRVLDGLYPSVQG-----------GTCCASVSSIGGKIFISQSISK 266
Query: 237 KKKLYC-IYVAIGQKRSTVAQIVKRLTDA---------GAINYTIIVSATASDAAPLQYL 286
C IYV G+ + +++ D T ++S ++ P +
Sbjct: 267 NSNSNCNIYVGCGENEFDIFRVIDEFYDQKIPIKDHQESIAQKTCLISNSSKMVTPTTEI 326
Query: 287 APYSGCAMGEFFRDNGKHALIIYDDLSK--QAVAYRQMSL--LLRRPPGREAYPGDVFYL 342
+ ++G +GE+FRD G + I D ++ QAV Q L +L E +
Sbjct: 327 SVFTGITIGEYFRDMGLNVSFIVDSTNQWSQAVNQIQEKLGEILPSETQSEVLTAKIGQF 386
Query: 343 HSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIF 392
++R R + GS+T + + GD + I TN +I + Q+F
Sbjct: 387 YNR-AGRVRCLGSPERIGSITMVGIATQSEGDWANSI-TN-CTINNSQVF 433
>UniRef50_Q8G5D1 Cluster: Excinuclease ABC subunit A-like protein;
n=7; Bacteria|Rep: Excinuclease ABC subunit A-like
protein - Bifidobacterium longum
Length = 865
Score = 37.9 bits (84), Expect = 0.69
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 99 GLKGMALNLEPDNVGVVVFGND-KLIKEGDIVKRTGAIVDVPVGEQIL-GRVVDALGNPI 156
GL G+ +L D VVV +D +++K D + G + G I G V + NP
Sbjct: 421 GLLGVMHDLVADGNSVVVVDHDVRVLKAADHLIEMGPVAGAEGGHVIAQGTVGEVAANPS 480
Query: 157 DGKGPI---DTKSRMRVGIKAPGI--IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 211
P + +R+R + P + + R+ + +K +D V I RG+ + G
Sbjct: 481 SRIAPFLADNVSARIRERVAEPQVFDLGRIRMTTSQLHTVKPLD--VDIPRGRLVAVTGV 538
Query: 212 RQTGKTALAIDTII 225
+GKT + ++++I
Sbjct: 539 SGSGKTTMVLESLI 552
>UniRef50_UPI0000E823B4 Cluster: PREDICTED: similar to vacuolar
proton-ATPase A-subunit, partial; n=2; Gallus
gallus|Rep: PREDICTED: similar to vacuolar proton-ATPase
A-subunit, partial - Gallus gallus
Length = 262
Score = 37.5 bits (83), Expect = 0.92
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 64 ADLEET---GRVLSIGDGIARVYGLKNIQAEEMVEFSSG-LKGMALNLEPDNVGVVVFGN 119
AD+EE G V + + + E+V L G + LE D + V+
Sbjct: 10 ADVEEESLLGAVHGVSGPVVTAIRMAGAAMYELVRVGHAELVGEIIRLEGDMATLQVYEE 69
Query: 120 DKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 179
++ GD V RTG + V +G ILG + D + P+ + + G+ P +P
Sbjct: 70 TSGLRVGDPVLRTGQPLSVELGPGILGSIFDGIQRPLRDIAQLTGGIYIPRGVNVPA-LP 128
Query: 180 R 180
R
Sbjct: 129 R 129
>UniRef50_Q9FC33 Cluster: Putative transcription terminator factor;
n=2; Streptomyces|Rep: Putative transcription terminator
factor - Streptomyces coelicolor
Length = 415
Score = 37.5 bits (83), Expect = 0.92
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 156 IDGKGPIDTKSRMRVGIKAPGIIPRVSVR-EPMQTGI--KAVDSLVPIGRGQRELIIGDR 212
++G+ P D +SR P + P +R E G+ + VD L P+G+GQR LI+
Sbjct: 115 VNGRTP-DRRSRPHFADLTP-LHPHERLRLEHPAAGLAGRVVDLLAPVGKGQRGLIVAPP 172
Query: 213 QTGKTAL 219
+TGKT L
Sbjct: 173 KTGKTVL 179
>UniRef50_O67031 Cluster: Transcription termination factor rho;
n=251; Bacteria|Rep: Transcription termination factor
rho - Aquifex aeolicus
Length = 436
Score = 37.5 bits (83), Expect = 0.92
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 16/231 (6%)
Query: 185 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIY 244
+P + + V + PIG+GQR LI+ + GKT L + I N E +Y I
Sbjct: 169 DPNELSTRVVSLIAPIGKGQRGLIVAPPKAGKTVL-LQKIAQAIIRNHPE-----VYLII 222
Query: 245 VAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKH 304
+ I ++ V ++ + + D +V++T + + + K
Sbjct: 223 LLIDERPEEVTEMRRIVKDKAE-----VVASTFDEPPERHMQVAEIVVEKAKRMVELKKD 277
Query: 305 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTA 364
+I+ D L++ + + S + P GR G R + + GGSLT
Sbjct: 278 VVILMDSLTR----FTRASNAVTPPTGRVLTGGIEITAFQRPKKFFGAARNIEEGGSLTI 333
Query: 365 LPVIETQAGD-VSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR 414
+ + G + I + +I L+ L + I PAIN+ S +R
Sbjct: 334 IATALVETGSKMDDVIYEEFKGTGNMEIHLDRRLMERRIFPAINIEKSGTR 384
>UniRef50_Q3IUV2 Cluster: TraG; n=1; Rhodobacter sphaeroides
2.4.1|Rep: TraG - Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM158)
Length = 1136
Score = 37.1 bits (82), Expect = 1.2
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 6/160 (3%)
Query: 5 SARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTHKAAEISTILEERILGAAPKA 64
SA ++G++ + +++ K S + A+ T + G +
Sbjct: 657 SASLSGNLGAKSDERFSEIVKAATSAGIDKDVSTINSARYSASSSDTHGRQTTAGEDRRF 716
Query: 65 DLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK 124
L+E R+ I+R+ K+ E SG + +NL +V G ++
Sbjct: 717 SLDEGERLAE--SYISRLEEAKSYSEAES-RLKSGGTSLDMNLNQMIGNELVRGGHNPLE 773
Query: 125 EGDIVK-RTGAIVDVPVGEQILGRVVDALGNPIDGKGPID 163
D +TGA + G+QI+GRVVD L N + G GP D
Sbjct: 774 VSDFFNPKTGAAMGE--GKQIVGRVVDDLVNGLVGPGPQD 811
>UniRef50_Q70AH6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Oenococcus oeni|Rep: ATP-dependent Clp
protease proteolytic subunit - Oenococcus oeni
(Leuconostoc oenos)
Length = 202
Score = 37.1 bits (82), Expect = 1.2
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 331 GREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAG--DVSAYIPTNVISITD 388
GRE+Y L R++ ++ D+M + L ++ Q D+ YI + S+T
Sbjct: 12 GRESYDLPSRLLKDRIILVQGEVEDQMATSIVAQLLFLDAQDPNKDIYMYINSPGGSVTA 71
Query: 389 GQIFLETELFYKGIRPAINVGL--SVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQ 446
G ++T F + I +G+ S++ + +++ TK + + + + + Q A
Sbjct: 72 GMAIVDTMNFIRSDVQTIVMGMAASMATIIASSGTKGKRFMLPNAEYLIHQPMGGAGAGT 131
Query: 447 FGSDLDAATQQLLNRGMRLTELLKQGQYVPM 477
+D+ QLL RL +LK+ P+
Sbjct: 132 QQTDMSIIADQLLKTRKRLNNILKENSGKPI 162
>UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37;
Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis
sp. (strain PCC 6803)
Length = 860
Score = 37.1 bits (82), Expect = 1.2
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 93 MVEFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV----DVPVGEQILGR 147
++ SSG+ GMA N+ P N+G V+ G LI+ +I ++ + D P G QILGR
Sbjct: 168 LINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQILGR 227
>UniRef50_P84582 Cluster: ATP synthase subunit alpha; n=1; Populus
euphratica|Rep: ATP synthase subunit alpha - Populus
euphratica (Euphrates poplar)
Length = 98
Score = 37.1 bits (82), Expect = 1.2
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 122 LIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRV 181
+++ GD + R I +PV E LGRV++AL PIDG+ + APGII R
Sbjct: 7 VLQVGDGIAR---IAQIPVSEAYLGRVINALAKPIDGR---------LIESPAPGIISRA 54
Query: 182 SVREPMQTGIKAVDSLVPIGRGQRELI 208
S + ++ LV + +E+I
Sbjct: 55 SSVAQVVNALQERKFLVELRTQFQEII 81
>UniRef50_O83281 Cluster: Transcription termination factor rho; n=5;
Bacteria|Rep: Transcription termination factor rho -
Treponema pallidum
Length = 519
Score = 36.7 bits (81), Expect = 1.6
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 192 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKR 251
+ ++ PIG+GQR LI+ +TGK TI+ Q+ N ++Y I + I ++
Sbjct: 256 RVMNLFCPIGKGQRALIVAPPRTGK------TILMQKIANAITQNHPEVYLIVLLIDERP 309
Query: 252 STVAQIVKRLTDAGAINYTIIVSAT 276
V ++R DA I+ T AT
Sbjct: 310 EEVTD-MERTVDAEVISSTFDEQAT 333
>UniRef50_A7A9Z6 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 644
Score = 36.3 bits (80), Expect = 2.1
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 13/154 (8%)
Query: 358 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGS 417
GG L A+ I T A D + + T +TD Q +E + + LSV + +
Sbjct: 327 GGNYLDAITQINTIAFDKTGTLTTGCFDVTDMQAHRISE------SELLTLLLSVEQKST 380
Query: 418 AAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPM 477
+A+ + A + A E+ A G + Q++L +RL + ++G +P
Sbjct: 381 HPIAQAIVRYAKKQNISAASVSEMHELAGHGVEAVIGGQEVLVGNIRL--MKERGISIPE 438
Query: 478 AIEEQVA-IIYCGV----RGHLDKLDPSKITAFE 506
+ +QVA ++ C + GHL D K A E
Sbjct: 439 ELSDQVATVVICAIDKKYAGHLLLSDTLKDDAVE 472
>UniRef50_A7PG24 Cluster: Chromosome chr6 scaffold_15, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_15, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 69
Score = 36.3 bits (80), Expect = 2.1
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 454 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKI 502
ATQ L + +L ELL+Q Q P+ ++EQ+ I+ +LD L+ +I
Sbjct: 9 ATQNQLTKVEQLHELLQQSQSSPLTMKEQIMTIHTQTNDYLDSLEIEQI 57
>UniRef50_Q4WFI3 Cluster: Short-chain dehydrogenase/reductase family
protein, putative; n=1; Aspergillus fumigatus|Rep:
Short-chain dehydrogenase/reductase family protein,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 344
Score = 36.3 bits (80), Expect = 2.1
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 381 TNVISITDGQIFLET--ELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGS----MKLE 434
T VI+ ++G I E +LF G+ I +G+ G AA K + G+ L+
Sbjct: 40 TAVITGSNGGIGFEAARQLFQLGLSRLI-MGVRSQASGDAAAEKLRAEFRGADIQVWLLD 98
Query: 435 LAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQ----GQYVPMAIEEQVAIIYCGV 490
+A Y ++ AFA+ DLD +LN M+ + + K+ G + ++ + C +
Sbjct: 99 MADYGDIDAFARRCRDLDRIDYVILNAAMQ-SSIFKRHHTTGHELVFQVDYLSTALLCML 157
Query: 491 RGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESD 535
+ K D S++ A K + S LS G I+P D
Sbjct: 158 LASVLK-DQSRVGAVTKPPVLTVVGSDTMYLSKFQAAGPISPRMD 201
>UniRef50_P21212 Cluster: Uncharacterized protein in lcrE 5'region;
n=114; Bacteria|Rep: Uncharacterized protein in lcrE
5'region - Yersinia enterocolitica
Length = 58
Score = 36.3 bits (80), Expect = 2.1
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 138 VPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 191
V VGE +LG+V+D LG P DG + + V AP + R + P+ GI
Sbjct: 4 VGVGEHLLGQVLDGLGQPFDGGHLPEPAAWYPVYQDAPAPMSRKLITTPLSLGI 57
>UniRef50_UPI0000E4A607 Cluster: PREDICTED: similar to Hamartin,
partial; n=5; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Hamartin, partial -
Strongylocentrotus purpuratus
Length = 1454
Score = 35.9 bits (79), Expect = 2.8
Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 344 SRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAY---IPTNVISITDGQI-FLETELFY 399
+ +L+R MSD++ L+ LP+ ++ + + Y P + I++ GQ+ L +L Y
Sbjct: 858 AEMLDRHISMSDEVHDKELSRLPLTSQKSVNWTHYGGSPPADEINLLKGQLQLLHNQLLY 917
Query: 400 KGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLEL 435
+ + ++ G + +G + KA +++ +MK +L
Sbjct: 918 ERHKREVHAGRNRRLLGKTHKAKAYEELNSAMKDQL 953
>UniRef50_UPI0000E47BE5 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 253
Score = 35.9 bits (79), Expect = 2.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 368 IETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 415
I+T GDV Y+ N +S DG + L+ EL K R IN L S++
Sbjct: 137 IKTNYGDVPIYVTENGVSEPDGPLNLDDELRTKYYRSYINEALKASKI 184
>UniRef50_Q4TFT9 Cluster: Chromosome undetermined SCAF4210, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4210,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 189
Score = 35.9 bits (79), Expect = 2.8
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 146 GRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSVREPMQTGIKAVDSLVPIGRG 203
GRV + G PID +GP + + I I P R+ E +QTGI A+D + I RG
Sbjct: 3 GRVFNGSGKPID-RGP-SVLAEDYLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARG 60
Query: 204 QR 205
Q+
Sbjct: 61 QK 62
>UniRef50_A5V9Z8 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 241
Score = 35.9 bits (79), Expect = 2.8
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 15/140 (10%)
Query: 60 AAPKADLE-ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFG 118
A PK L E G S G RVY +K + + + + + L +L+P + F
Sbjct: 105 ARPKVALTIEPGEPGSAGGREGRVYHVKGLDSSKPDKPADYLISSDPDLKPVGAALEQFM 164
Query: 119 NDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGII 178
N ++ ++ G++ +GE R + ALG PID G R R+ + +
Sbjct: 165 NAAIVPSAPLI---GSMATEMIGET---RTIFALGTPIDVDG------RFRLNLASKAAF 212
Query: 179 PRVSVREPMQTGIKAVDSLV 198
P R P Q ++VD+LV
Sbjct: 213 PSAYFRLPAQP--QSVDALV 230
>UniRef50_Q02ZT7 Cluster: Lipopolysaccharide biosynthesis
glycosyltransferase; n=1; Lactococcus lactis subsp.
cremoris SK11|Rep: Lipopolysaccharide biosynthesis
glycosyltransferase - Lactococcus lactis subsp. cremoris
(strain SK11)
Length = 759
Score = 35.5 bits (78), Expect = 3.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 117 FGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPG 176
FGN ++I++ I+ ++ + V + V A +DGK P D K+++ V + P
Sbjct: 274 FGNSEVIEKAKIILNN-PLIGLGVELEREFEKVKANFVDLDGKNPKDLKAKIYVSMHKPS 332
Query: 177 IIPRVSVREPMQTGIKAVDSLVP 199
IP+ P+Q G +P
Sbjct: 333 YIPKNKFLVPIQVGSALATGEIP 355
>UniRef50_A1VI76 Cluster: Vault protein inter-alpha-trypsin domain
protein precursor; n=2; Burkholderiales|Rep: Vault
protein inter-alpha-trypsin domain protein precursor -
Polaromonas naphthalenivorans (strain CJ2)
Length = 701
Score = 35.5 bits (78), Expect = 3.7
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 347 LERAAKMSDKMGGGSLTAL-PVIE-TQAGDVSAYIPTNVISITDGQIFLETELFYKGIRP 404
+E+A + D+MGGG T L P ++ A +A + V+ +TDG + +E E F R
Sbjct: 387 IEQAVRTIDEMGGGGGTELIPALKRVYAEPKAADVSRTVVVVTDGFVTVEREAFELVRRN 446
Query: 405 AINVGLSVSRVGSAAQTKAMKQVA 428
L +GS+ M+ +A
Sbjct: 447 LSQANLFSFGIGSSVNRHLMEGLA 470
>UniRef50_Q00Y22 Cluster: [S] KOG4674 Uncharacterized conserved
coiled-coil protein; n=1; Ostreococcus tauri|Rep: [S]
KOG4674 Uncharacterized conserved coiled-coil protein -
Ostreococcus tauri
Length = 674
Score = 35.5 bits (78), Expect = 3.7
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 440 EVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLD 498
E++A + + LDA L + G RL+E L + + + +EEQVA + G L ++D
Sbjct: 403 EISALKERVAHLDAQVDDLTSEGKRLSETLTKQRQIKDKLEEQVAGSEARIEGLLQEID 461
>UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n=2;
Planctomycetaceae|Rep: Transcription termination factor
Rho - Blastopirellula marina DSM 3645
Length = 444
Score = 35.1 bits (77), Expect = 4.9
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 KAVDSLVPIGRGQRELIIGDRQTGKTAL 219
+ VD L P+G+GQR L++ +TGKT L
Sbjct: 181 RIVDLLTPLGKGQRALVVAPPRTGKTML 208
>UniRef50_Q2Y0E8 Cluster: VP3; n=1; Aedes pseudoscutellaris
reovirus|Rep: VP3 - Aedes pseudoscutellaris reovirus
Length = 1202
Score = 34.7 bits (76), Expect = 6.5
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 82 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGND-KLIKEGDIVKRTGAIVDVPV 140
VY L N+ A M F G + VV GN ++++ GD + + ++D +
Sbjct: 712 VYHLYNVMANMMQNFIPNTDGQFHSFRACAYAVVDSGNIYRVVQNGDELNES-LVIDTAI 770
Query: 141 GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSL 197
+LG +A GN I G + ++++ I P ++ ++T I AV S+
Sbjct: 771 VWGLLGNTDNAYGNAIGATGTANVPTKVQPVIPTPDNFITPTIH--LKTSIDAVCSV 825
>UniRef50_A5F9L0 Cluster: Phage related protein; n=9; Bacteria|Rep:
Phage related protein - Clostridium kluyveri DSM 555
Length = 2561
Score = 34.7 bits (76), Expect = 6.5
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 404 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFA-QFGSDLDAATQQLLNRG 462
P + VG++ S++G+ +T +M Q AG+++ +AQ + A + G D + Q G
Sbjct: 218 PLVGVGIAASKIGNDFET-SMSQAAGALEKPIAQMGSLRELALKTGQDTQFSATQ---AG 273
Query: 463 MRLTELLKQG 472
+TEL K G
Sbjct: 274 NAITELAKGG 283
>UniRef50_Q5CS50 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 856
Score = 34.7 bits (76), Expect = 6.5
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 141 GEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP 179
GE ++ + D LGN IDG+ P TKS++R IK+ G+ P
Sbjct: 135 GESVVRGINDNLGNNIDGRTPQTTKSQVR--IKSLGMTP 171
>UniRef50_Q1YH29 Cluster: Putative uncharacterized protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
protein - Aurantimonas sp. SI85-9A1
Length = 168
Score = 34.3 bits (75), Expect = 8.5
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 97 SSGLKGMALNL-EPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNP 155
SSG+ AL L + G ++ EGD++K+ G +VD +G++ G DA G
Sbjct: 31 SSGVAAFALRLVDGQRSGTGAGKGEEAAGEGDVLKQRGLVVD--MGKKAGG---DAEGGQ 85
Query: 156 IDGKGP-IDTKSRMRVGIKAPG 176
DG GP ++T G K G
Sbjct: 86 RDGHGPRLETDQHRDAGQKLEG 107
>UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase
alpha/beta subunit central region; n=1; Opitutaceae
bacterium TAV2|Rep: H+transporting two-sector ATPase
alpha/beta subunit central region - Opitutaceae
bacterium TAV2
Length = 403
Score = 34.3 bits (75), Expect = 8.5
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 192 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 222
+AVD P+G+G R LI+ +TGKT L D
Sbjct: 146 RAVDLFCPVGKGTRGLIVAPPRTGKTTLLRD 176
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.134 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,511,186
Number of Sequences: 1657284
Number of extensions: 22573089
Number of successful extensions: 56984
Number of sequences better than 10.0: 202
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 56471
Number of HSP's gapped (non-prelim): 275
length of query: 553
length of database: 575,637,011
effective HSP length: 105
effective length of query: 448
effective length of database: 401,622,191
effective search space: 179926741568
effective search space used: 179926741568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 75 (34.3 bits)
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