Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001853-TA|BGIBMGA001853-PA|IPR005294|ATPase, F1 complex,
alpha subunit, IPR000793|ATPase, F1/V1/A1 complex, alpha/beta subunit,
C-terminal, IPR004100|ATPase, F1/V1/A1 complex, alpha/beta subunit,
N-terminal, IPR000194|ATPase, F1/V1/A1 complex, alpha/beta subunit,
nucleotide-binding
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 774 0.0
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 112 1e-25
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 109 1e-24
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 64 5e-11
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 31 0.32
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 29 1.7
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 29 2.2
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 28 2.9
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 28 3.9
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 6.8
SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|ch... 27 9.0
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 9.0
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 774 bits (1914), Expect = 0.0
Identities = 365/502 (72%), Positives = 439/502 (87%)
Query: 48 EISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNL 107
E+ +ILEERI GA +A + E+GRVLSIGDGIAR+ GL N+QAEE+VEFSSG+KGMALNL
Sbjct: 35 EVPSILEERIRGAYNQAQMMESGRVLSIGDGIARISGLSNVQAEELVEFSSGIKGMALNL 94
Query: 108 EPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSR 167
E D VG V+FGND+L++EG++VKRT IVDVPVGE +LGRVVDALGNPIDGKGPI T R
Sbjct: 95 EADTVGCVLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGPIKTTER 154
Query: 168 MRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 227
RV +KAPGI+PR SV EPMQTG+KA+DS+VPIGRGQRELIIGDRQTGKTA+A+DTI+N
Sbjct: 155 RRVQLKAPGILPRTSVCEPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAIALDTILNH 214
Query: 228 QRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLA 287
+R+N DE KKLYC+YVA+GQKRSTVAQ+V++L + ++ Y+IIV+ATAS++APLQYLA
Sbjct: 215 KRWNNSSDESKKLYCVYVAVGQKRSTVAQLVQKLEENDSLKYSIIVAATASESAPLQYLA 274
Query: 288 PYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 347
P+SGCAMGE+FRDNGKH L++YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL
Sbjct: 275 PFSGCAMGEWFRDNGKHGLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 334
Query: 348 ERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
ERAAKMS K GGGSLTALPVIETQ GDVSAYIPTNVISITDGQIFLE+ELF+KGIRPAIN
Sbjct: 335 ERAAKMSPKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFFKGIRPAIN 394
Query: 408 VGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTE 467
VGLSVSRVGSAAQ KAMKQVAG +KL LAQYREVA+FAQFGSDLDA T+ L+RG+RLTE
Sbjct: 395 VGLSVSRVGSAAQVKAMKQVAGQIKLFLAQYREVASFAQFGSDLDAGTRATLDRGLRLTE 454
Query: 468 LLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKD 527
LLKQ QY P+A+EEQV +IYCGV+G+LDK+ ++ FE +F ++++S ++ I K+
Sbjct: 455 LLKQPQYSPLAVEEQVPLIYCGVKGYLDKIPVDRVVEFEHKFIPYLRSSGAEIMEAIRKE 514
Query: 528 GQITPESDASLKKIVTDFLATF 549
G ++ ++ SLK ++ +FL++F
Sbjct: 515 GVLSKTTEDSLKAVIKEFLSSF 536
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 112 bits (269), Expect = 1e-25
Identities = 85/301 (28%), Positives = 139/301 (46%), Gaps = 12/301 (3%)
Query: 132 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIP--RVSVREPMQT 189
TG + +PV E +LGRV + G PID KGP + + + I I P R+ E +QT
Sbjct: 92 TGHSMRIPVSEDMLGRVFNGSGLPID-KGP-NLLAEDYLDINGSPINPYARIYPEEMIQT 149
Query: 190 GIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDT-----IINQQRFNKGEDEKKKLYCIY 244
GI ++D L I RGQ+ I +A ++ + + + + ++
Sbjct: 150 GISSIDGLNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKRPTKDVHDGHEDNFSIVF 209
Query: 245 VAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR-DNGK 303
A+G T + + G+ + A+D + + P + EF K
Sbjct: 210 AAMGVNLETARFFQRDFEENGSFERVTLFLNLANDPTIERIITPRLALSASEFLAYQTEK 269
Query: 304 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLT 363
H L I D++ A A R++S PGR YPG ++ S + ERA ++ + GS+T
Sbjct: 270 HVLTILTDMTSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGR--NGSIT 327
Query: 364 ALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKA 423
+P++ D++ IP IT+GQIF++ +L I P INV S+SR+ +A +
Sbjct: 328 QIPILTMPNDDITHPIPDLTGYITEGQIFVDRQLHNNAIYPPINVLPSLSRLMKSAIGEG 387
Query: 424 M 424
M
Sbjct: 388 M 388
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 109 bits (262), Expect = 1e-24
Identities = 95/393 (24%), Positives = 171/393 (43%), Gaps = 29/393 (7%)
Query: 114 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 173
+ + G + L++ G V TG+ + +PVG LGR+++ +G P+D +GPI +
Sbjct: 108 IAMDGTEGLVR-GTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHAD 166
Query: 174 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 233
AP + + E ++TGIK VD L P RG + + G GKT + I N + + G
Sbjct: 167 APSFEEQSTTPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGG 226
Query: 234 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAI-----NYTIIVSATASDAAPLQYLAP 288
Y ++ +G++ + + + + G I + +V ++ +
Sbjct: 227 -------YSVFTGVGERTREGNDLYREMQETGVIKLEGESKAALVFGQMNEPPGARARVA 279
Query: 289 YSGCAMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 347
+G + E+FRD G+ L+ D++ + A ++S LL R P Y + +
Sbjct: 280 LTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQ 339
Query: 348 ERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 407
ER GS+T++ + A D++ P + D L + GI PA++
Sbjct: 340 ERITTTKK----GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSISELGIYPAVD 395
Query: 408 VGLSVSR-VGSAAQTKAMKQVAGSMKLELAQYREVA-AFAQFGSD-LDAATQQLLNRGMR 464
S SR + + +AGS++ L +Y+ + A G D L A + + R +
Sbjct: 396 PLDSKSRMMDPRILGEEHYNLAGSVQQMLQEYKSLQDIIAILGMDELSEADKLTVERARK 455
Query: 465 LTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKL 497
+ L Q P A+ E ++ G+ G L L
Sbjct: 456 VQRFLSQ----PFAVAE----VFTGIEGRLVSL 480
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 64.1 bits (149), Expect = 5e-11
Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
+ ++ +P+ TG + +D+L P +G I G GKT ++ Q +K +
Sbjct: 225 VADNLTANQPLLTGQRVLDALYPCVQGGTTAIPGAFGCGKTVIS-------QSLSKYSNS 277
Query: 237 KKKLYCIYVAIGQKRSTVAQIVK---RLT-DAGA-----INYTIIVSATASDAAPLQYLA 287
+YV G++ + +A+++ LT D + T +V+ T++ + +
Sbjct: 278 D---LIVYVGCGERGNEMAEVLMDFPELTIDINGKPEPIMKRTTLVANTSNMPVAAREAS 334
Query: 288 PYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 347
Y+G + E++RD GK+ ++ D S+ A A R++S L P YP + +
Sbjct: 335 IYTGITLAEYYRDQGKNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGAKLASFY 394
Query: 348 ERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRP 404
ERA + + G+++ + + GD S + + + I L+ +L + P
Sbjct: 395 ERAGRARCLGSPDREGTVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFP 454
Query: 405 AINVGLSVSRVGSAAQTKAMKQVAG 429
+IN LS S+ +A Q ++V G
Sbjct: 455 SINTSLSYSKYINALQPWYEERVPG 479
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 31.5 bits (68), Expect = 0.32
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 315 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM 353
Q++A + +LL+ P GRE GD FY + + A++
Sbjct: 651 QSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARI 689
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 29.1 bits (62), Expect = 1.7
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 418 AAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLL--NRGMRLTELLKQ---- 471
A K ++ A +MK Y E A + G L T +LL + M TE +
Sbjct: 907 AESLKIFREKANAMKERSLSYEECLAIVEEGESLQLKTPELLYFKQYMEKTEWIDSFNQI 966
Query: 472 GQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITA-FEKEFTQHIKTSHQGLLS 522
Q +EE V +I G + L + + TA KE +++ +GLLS
Sbjct: 967 SQKTDSTMEELVELIERGEKIGLTSDNENMATALLLKEKSENWMKQVEGLLS 1018
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/82 (19%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 66 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGN--DKLI 123
++ +G ++ G + + ++Q +++E +G +G +L ++ G ++ DK +
Sbjct: 432 VDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTV 491
Query: 124 KEGDIVKRTGAIVDVPVGEQIL 145
+ DI R+G + +P+ +L
Sbjct: 492 RIWDIFSRSGIVEPLPIPSDVL 513
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 404 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRG- 462
P N+GL V T+ + G + E Y + FA+ +D+D +QL+ G
Sbjct: 337 PHTNIGLMSKLV-----TQIEEPFGGELTFENPFYTTLQCFAENSADMDDNLRQLIKSGD 391
Query: 463 -MRLTELLKQGQYVPMAIEEQVAI 485
++T+L + + E +A+
Sbjct: 392 TEKMTDLFSKSRLYRYFFETSIAV 415
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1647
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 495 DKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFL 546
DK+DP AF+K T ++ TS + KD T S L I+ +FL
Sbjct: 1424 DKVDPVFKDAFQKLITPNLLTSQ--FFDVLTKDALYTNGSCWELSVIILNFL 1473
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.1 bits (57), Expect = 6.8
Identities = 19/80 (23%), Positives = 38/80 (47%)
Query: 182 SVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLY 241
S+RE + +A+D V Q E + +T KT L T + ++ + D ++KLY
Sbjct: 610 SLREEIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLY 669
Query: 242 CIYVAIGQKRSTVAQIVKRL 261
+ + + +S Q+ + +
Sbjct: 670 DLRIELDYTKSNCKQMEEEM 689
>SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 333
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 156 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTG 215
+D K PI+T + G I V + E IK ++VPI + E + R
Sbjct: 125 VDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIE 184
Query: 216 KTALAIDT 223
K + +DT
Sbjct: 185 KNGI-LDT 191
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 312 LSKQAVAYRQMSLLLRRPP 330
LSK+A+ YR+ L L+RPP
Sbjct: 102 LSKRALHYRRKRLALKRPP 120
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.134 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,139,104
Number of Sequences: 5004
Number of extensions: 84633
Number of successful extensions: 218
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 206
Number of HSP's gapped (non-prelim): 12
length of query: 553
length of database: 2,362,478
effective HSP length: 76
effective length of query: 477
effective length of database: 1,982,174
effective search space: 945496998
effective search space used: 945496998
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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