Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001853-TA|BGIBMGA001853-PA|IPR005294|ATPase, F1 complex,
alpha subunit, IPR000793|ATPase, F1/V1/A1 complex, alpha/beta subunit,
C-terminal, IPR004100|ATPase, F1/V1/A1 complex, alpha/beta subunit,
N-terminal, IPR000194|ATPase, F1/V1/A1 complex, alpha/beta subunit,
nucleotide-binding
(553 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 877 0.0
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 877 0.0
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 706 0.0
AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical ... 126 5e-29
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 118 8e-27
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 113 2e-25
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 102 8e-22
Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical pr... 91 2e-18
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 56 9e-08
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr... 31 2.8
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p... 31 2.8
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 877 bits (2171), Expect = 0.0
Identities = 424/503 (84%), Positives = 468/503 (93%)
Query: 47 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 106
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 7 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 66
Query: 107 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 166
L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVVDALGNPIDGKGPI
Sbjct: 67 LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 126
Query: 167 RMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 226
R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTIIN
Sbjct: 127 RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 186
Query: 227 QQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYL 286
Q+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI+VSATASDAAPLQ+L
Sbjct: 187 QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 246
Query: 287 APYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 346
APYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 247 APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 306
Query: 347 LERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 406
LERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 307 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 366
Query: 407 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLT 466
NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA+TQQLLNRG+RLT
Sbjct: 367 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 426
Query: 467 ELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAK 526
ELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF H+++S Q LL TI +
Sbjct: 427 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 486
Query: 527 DGQITPESDASLKKIVTDFLATF 549
+GQI+P++DA LK +V +FLATF
Sbjct: 487 EGQISPQTDAQLKDVVVNFLATF 509
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 877 bits (2171), Expect = 0.0
Identities = 424/503 (84%), Positives = 468/503 (93%)
Query: 47 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 106
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 107 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 166
L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVVDALGNPIDGKGPI
Sbjct: 94 LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 153
Query: 167 RMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 226
R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTIIN
Sbjct: 154 RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIIN 213
Query: 227 QQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYL 286
Q+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI+VSATASDAAPLQ+L
Sbjct: 214 QKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFL 273
Query: 287 APYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 346
APYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 274 APYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 333
Query: 347 LERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 406
LERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAI
Sbjct: 334 LERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAI 393
Query: 407 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLT 466
NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA+TQQLLNRG+RLT
Sbjct: 394 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLT 453
Query: 467 ELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAK 526
ELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF H+++S Q LL TI +
Sbjct: 454 ELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRE 513
Query: 527 DGQITPESDASLKKIVTDFLATF 549
+GQI+P++DA LK +V +FLATF
Sbjct: 514 EGQISPQTDAQLKDVVVNFLATF 536
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 706 bits (1745), Expect = 0.0
Identities = 360/504 (71%), Positives = 416/504 (82%), Gaps = 9/504 (1%)
Query: 52 ILEERILGAAPKADLEETGRVLSIGDGIARVYG--LKNIQAEEMVEFSSGLK----GMAL 105
+L +RI+ A A + + + G+A G + I E ++ +G+ G L
Sbjct: 1 MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL 60
Query: 106 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 165
++ D + V +G K I+ ++V+ I + + + V LGNPIDGKGPI
Sbjct: 61 SIG-DGIARV-YGL-KNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVLGNPIDGKGPIANA 117
Query: 166 SRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTII 225
R RV +KAPGIIPR+SVREPM TG+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTII
Sbjct: 118 RRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTII 177
Query: 226 NQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQY 285
NQ+RFN D+KKKL+CIYVA+GQKRSTVAQIVKRLTDAGA++YTI+VSATASDAAPLQ+
Sbjct: 178 NQKRFNDAGDDKKKLFCIYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQF 237
Query: 286 LAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 345
LAPYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR
Sbjct: 238 LAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 297
Query: 346 LLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA 405
LLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPA
Sbjct: 298 LLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPA 357
Query: 406 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRL 465
INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA+TQQLLNRG+RL
Sbjct: 358 INVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRL 417
Query: 466 TELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIA 525
TELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF H+++S Q LL TI
Sbjct: 418 TELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIR 477
Query: 526 KDGQITPESDASLKKIVTDFLATF 549
++GQI+P++DA LK +V +FLATF
Sbjct: 478 EEGQISPQTDAQLKDVVVNFLATF 501
Score = 118 bits (284), Expect = 1e-26
Identities = 57/73 (78%), Positives = 64/73 (87%)
Query: 47 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 106
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 107 LEPDNVGVVVFGN 119
L+ DNVGVVV GN
Sbjct: 94 LDVDNVGVVVLGN 106
>AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical
protein H28O16.1b protein.
Length = 146
Score = 126 bits (303), Expect = 5e-29
Identities = 60/76 (78%), Positives = 68/76 (89%)
Query: 47 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 106
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 107 LEPDNVGVVVFGNDKL 122
L+ DNVGVVVFGNDK+
Sbjct: 94 LDVDNVGVVVFGNDKI 109
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 118 bits (285), Expect = 8e-27
Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 8/328 (2%)
Query: 102 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 160
G L + + V VF G + + I + TG I+ PV E +LGR+ + G PID
Sbjct: 66 GQVLEISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGP 125
Query: 161 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 220
P+ + + + + R+ E +QTGI A+D + I RGQ+ I +A
Sbjct: 126 PVLAEDFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSASGLPHNEIA 185
Query: 221 IDTIINQQRFNKGED---EKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATA 277
I+ Q + D E+ ++ A+G T + + G++ + A
Sbjct: 186 AQ-IVRQGGLVQLPDRPHEQTNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLA 244
Query: 278 SDAAPLQYLAPYSGCAMGEFFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 336
+D + + P EF KH L++ D+S A A R++S PGR +P
Sbjct: 245 NDPTIERIITPRIALTSAEFLAYQCKKHVLVVLTDMSSYAEALREVSAAREEVPGRRGFP 304
Query: 337 GDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 396
G ++ + + ERA ++ + GS+T +P++ D++ IP IT+GQI+++ +
Sbjct: 305 GYMYTDLATIYERAGRVEGR--DGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQ 362
Query: 397 LFYKGIRPAINVGLSVSRVGSAAQTKAM 424
L + I P INV S+SR+ +A + M
Sbjct: 363 LHNRLIYPPINVLPSLSRLMKSAIGEGM 390
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 113 bits (273), Expect = 2e-25
Identities = 80/297 (26%), Positives = 140/297 (47%), Gaps = 7/297 (2%)
Query: 132 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 191
TG I PV +LGR+ + G PID P+ + + + + R+ E +QTGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168
Query: 192 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ---QRFNKGEDEKKKLYCIYVAIG 248
A+D + I RGQ+ I +A I+ Q + +E ++ A+G
Sbjct: 169 SAIDVMNSIARGQKIPIFSAAGLPHNEIAAQ-IVRQGGLVQLPGRNNETVNFAIVFAAMG 227
Query: 249 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDN-GKHALI 307
T + + G+++ + A+D + + P EFF + GKH L+
Sbjct: 228 VNMETARFFKQDFEECGSMDNVCLFLNLANDPTIERIITPRIALTAAEFFAYHCGKHVLV 287
Query: 308 IYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPV 367
+ D+S A A R++S PGR +PG ++ + + ERA ++ + GS+T +P+
Sbjct: 288 VLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKGR--EGSITQIPI 345
Query: 368 IETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAM 424
+ D++ IP IT+GQI+++ +L + I P I+V S+SR+ +A + M
Sbjct: 346 LTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLMKSAVGEGM 402
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 102 bits (244), Expect = 8e-22
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 19/309 (6%)
Query: 114 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 173
+ + G + L++ G V TG + +PVG + LGR+++ +G PID +GPI +K+ + +
Sbjct: 120 IAMDGTEGLVR-GQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAE 178
Query: 174 APGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 233
AP + +E + TGIK VD L P +G + + G GKT L ++ I N + + G
Sbjct: 179 APEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 238
Query: 234 EDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINY------TIIVSATASDAAPLQYLA 287
Y ++ +G++ + + + G I+ +V ++ +
Sbjct: 239 -------YSVFAGVGERTREGNDLYHEMIEGGVIDLKGKNSKVSLVYGQMNEPPGARARV 291
Query: 288 PYSGCAMGEFFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 346
+G + E+FRD G+ L+ D++ + A ++S LL R P Y + +
Sbjct: 292 CLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSM 351
Query: 347 LERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 406
ER GS+T++ I A D++ P + D L + I PA+
Sbjct: 352 QERITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAV 407
Query: 407 NVGLSVSRV 415
+ S SR+
Sbjct: 408 DPLDSTSRI 416
>Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical
protein T26E3.7 protein.
Length = 106
Score = 90.6 bits (215), Expect = 2e-18
Identities = 40/50 (80%), Positives = 48/50 (96%)
Query: 267 INYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQA 316
++YTI+VSATASDAAPL++LAPYSGCA+GE F DNGKHALII+DDLSK+A
Sbjct: 1 MDYTIVVSATASDAAPLKFLAPYSGCAIGEHFLDNGKHALIIFDDLSKKA 50
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 55.6 bits (128), Expect = 9e-08
Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 22/249 (8%)
Query: 177 IIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDE 236
+ +++ P+ G + +D+L P +G I G GKT ++ Q +K +
Sbjct: 206 VTEKLAANNPLLCGQRVLDALFPCVQGGTTAIPGAFGCGKTVIS-------QSLSKYSNS 258
Query: 237 KKKLYCIYVAIGQKRSTVAQIVKRLTD---------AGAINYTIIVSATASDAAPLQYLA 287
IYV G++ + ++++++ + + T +V+ T++ + +
Sbjct: 259 DA---IIYVGCGERGNEMSEVLRDFPELTMEVEGVTTSIMKRTALVANTSNMPVAAREAS 315
Query: 288 PYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 347
Y+G + E+FRD G + ++ D S+ A A R++S L P YP + +
Sbjct: 316 IYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFY 375
Query: 348 ERAAK---MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRP 404
ERA + + GS+T + + GD + + + + I L+ +L + P
Sbjct: 376 ERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFP 435
Query: 405 AINVGLSVS 413
+IN +S S
Sbjct: 436 SINWLISYS 444
Score = 34.3 bits (75), Expect = 0.23
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 100 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 156
L G + LE D + V+ + GD V RTG + V +G I+G + D + P+
Sbjct: 39 LVGEIIRLEGDYATIQVYEETSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPL 95
>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 30.7 bits (66), Expect = 2.8
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 82 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 140
+ GL +Q+ + E G+K + +L + +DK LIK G I+ + I VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690
Query: 141 GEQILGR-VVDAL 152
++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703
>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 30.7 bits (66), Expect = 2.8
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 82 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 140
+ GL +Q+ + E G+K + +L + +DK LIK G I+ + I VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690
Query: 141 GEQILGR-VVDAL 152
++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.134 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,564,503
Number of Sequences: 27539
Number of extensions: 467283
Number of successful extensions: 1168
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1147
Number of HSP's gapped (non-prelim): 15
length of query: 553
length of database: 12,573,161
effective HSP length: 85
effective length of query: 468
effective length of database: 10,232,346
effective search space: 4788737928
effective search space used: 4788737928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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