Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001852-TA|BGIBMGA001852-PA|IPR000637|HMG-I and HMG-Y,
DNA-binding, IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR001650|Helicase, C-terminal, IPR014001|DEAD-like helicases,
N-terminal, IPR000330|SNF2-related
(3376 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 31 0.68
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 30 0.90
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 30 0.90
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 30 1.2
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 29 1.6
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 29 1.6
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 29 2.1
AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium transport... 28 3.6
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 27 6.3
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 27 8.4
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 30.7 bits (66), Expect = 0.68
Identities = 17/78 (21%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 211 NKNHHNRPSKDKIFETNQTTTSEADSTNNIEMSAECTNSSNDLKMKICPKAKEKIFPSHS 270
+KN+ RP+ + ++ +++S +DS ++ S++ ++SS++ + + KI P+
Sbjct: 351 DKNNFVRPANETDDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAE-----NFKISPAEQ 405
Query: 271 YKDLTTQLSNQDIRNQHN 288
YK ++ + RN+ +
Sbjct: 406 YKKQAKEVERRGNRNRRD 423
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 30.3 bits (65), Expect = 0.90
Identities = 31/174 (17%), Positives = 68/174 (39%), Gaps = 12/174 (6%)
Query: 571 PLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPT 630
P+ P + N S+ ++RG + K TS + + +N S + +
Sbjct: 421 PIPKPAPSSETNGSS----SQERGMESSDDAKSETSSTKDGSENGSNLWPAWVYCTRYSD 476
Query: 631 VPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISEN----EQKNCFIETENQ 686
P + Y K+P +++++ + N + + +++ +EN E++ + E
Sbjct: 477 RPSSGPRYRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTLSAELG 536
Query: 687 ISNNDEICMLPLNSNNTNIDTSKSDTTKILLESEKSVNNVTNESCVPNSDEAEQ 740
++ + + N KS + K L + + N S VP + E E+
Sbjct: 537 LNE----AQIKIWFQNKRAKIKKSSSEKNPLALQLMAQGLYNHSTVPLTKEEEE 586
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 30.3 bits (65), Expect = 0.90
Identities = 31/174 (17%), Positives = 68/174 (39%), Gaps = 12/174 (6%)
Query: 571 PLSTPDNQEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPT 630
P+ P + N S+ ++RG + K TS + + +N S + +
Sbjct: 421 PIPKPAPSSETNGSS----SQERGMESSDDAKSETSSTKDGSENGSNLWPAWVYCTRYSD 476
Query: 631 VPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISEN----EQKNCFIETENQ 686
P + Y K+P +++++ + N + + +++ +EN E++ + E
Sbjct: 477 RPSSGPRYRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTLSAELG 536
Query: 687 ISNNDEICMLPLNSNNTNIDTSKSDTTKILLESEKSVNNVTNESCVPNSDEAEQ 740
++ + + N KS + K L + + N S VP + E E+
Sbjct: 537 LNE----AQIKIWFQNKRAKIKKSSSEKNPLALQLMAQGLYNHSTVPLTKEEEE 586
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 190 EDILSTNMLSNQTEDEESLEINKNHHNRPSKDKIFETNQTTTSEADSTNNI 240
E +T Q +++ + HH RP+K N T+ AD+ N I
Sbjct: 3041 EHFFNTENQGKQDQEDRKVNPYLKHHKRPTKTPFHIANCFRTNSADNLNTI 3091
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 29.5 bits (63), Expect = 1.6
Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 11/177 (6%)
Query: 518 LNDEDEISTDIEQKNCSKETITESQISDDDEISLMCLKSYAPKQLLDNTDITTPLSTPDN 577
L DE ++ + KE + + +I DE L+ K L ++ D + N
Sbjct: 336 LAKHDETYDALKAERVEKEKLVKEEIKQYDE--LVSAKESKESTLKNSLDKFAKVQA--N 391
Query: 578 QEQCNSSNVEPIKKKRGRPKKNYEKKTTSRSPNVDKNQSQEINDGLQIVQSPTVPKTSTT 637
N ++K+ + E+K +V K +EI + ++S T KT
Sbjct: 392 MRATNE------RRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEVE 445
Query: 638 YSENKEPSN-KSETQVTESQVITLNDEDENIQSYISENEQKNCFIETENQISNNDEI 693
+ K ET+V + L E ++ + E++ E+E +I +DE+
Sbjct: 446 AKLTANLATLKDETKVLLEEKEKLQTELIELKRAVDESKSALSIAESELKICQHDEV 502
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 29.5 bits (63), Expect = 1.6
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 2986 PAPTPSTQTSSANKVVAGTSRDYSTATGLPQYLDNQAAVVNTERAASTQGPADCICLDSD 3045
P+P P+T+ S ++ +VA TS + P N AA + A+ A + L S
Sbjct: 743 PSPHPATRASPSSPIVA-TSSSGGGGSNTP----NSAAAPHPYYTAAAMAAASPLSLSS- 796
Query: 3046 DDEGPAPPHPVS-ISYTPPVPA 3066
APPHP S +S PV A
Sbjct: 797 ----KAPPHPHSALSSHSPVGA 814
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 196 NMLSNQTEDEESLEINK--NHHNRPSKDKIFETNQTTTSEADSTNNI 240
N + +D+E ++N HH R +K TN T+ AD+ N I
Sbjct: 3042 NTANQGKQDQEDRKVNPYLKHHKRQTKTPFHITNCFRTNSADNLNTI 3088
>AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium transport-like
protein protein.
Length = 591
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 2526 RKAAIAAERHLDMIVPNLLDDDSDLDTEPAYTEPAHTNPTRKTEQKSGKKIKMTTTIDME 2585
R I R L + P LD D +D P P H + E S K + +D
Sbjct: 447 RHTQIGISRALSALAPIQLDLDDVIDAPPIGRNPGHERCVDEIEAASQKLHQWRQAMDKF 506
Query: 2586 PANSARDNIE 2595
AR+ E
Sbjct: 507 ADRPAREKTE 516
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/78 (20%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 211 NKNHHNRPSKDKIFETNQTTTSEADSTNNIEMSAECTNSSNDLKMKICPKAKEKIFPSHS 270
+KN+ RP+ + ++ +++S +DS ++ S++ ++SS++ + + KI +
Sbjct: 351 DKNNFVRPANETDDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAE-----NFKISTAEQ 405
Query: 271 YKDLTTQLSNQDIRNQHN 288
YK ++ + RN+ +
Sbjct: 406 YKKQAKEVERRGNRNRRD 423
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 2980 LPAVSCPAPTPSTQTSSANKVVAGTSRDYSTATGLPQYLDNQAAVVNTERAASTQGP 3036
LP + A +SS N + TS+ S+A P ++ + A E S GP
Sbjct: 223 LPLIRSLADIGKNHSSSKNMPRSSTSKSISSANSFPMHVVSSAPSGMHEEGESALGP 279
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.311 0.127 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,059,178
Number of Sequences: 2123
Number of extensions: 122818
Number of successful extensions: 320
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 307
Number of HSP's gapped (non-prelim): 20
length of query: 3376
length of database: 516,269
effective HSP length: 77
effective length of query: 3299
effective length of database: 352,798
effective search space: 1163880602
effective search space used: 1163880602
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 57 (27.1 bits)
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