Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001852-TA|BGIBMGA001852-PA|IPR000637|HMG-I and HMG-Y,
DNA-binding, IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR001650|Helicase, C-terminal, IPR014001|DEAD-like helicases,
N-terminal, IPR000330|SNF2-related
(3376 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 33 0.030
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 32 0.092
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 30 0.37
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 29 0.49
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 27 2.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 26 4.6
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 26 6.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 25 8.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 25 8.0
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 25 8.0
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 25 8.0
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 33.5 bits (73), Expect = 0.030
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 2309 DSLLRGSTEPGLPEHERAAAWMQFQQEHAHKQMQNELAANNTRISSKLQGHEYAKSPVPQ 2368
D+L+R S E G+P +RA + QQ+ A Q Q + + + +L + ++PVP+
Sbjct: 1285 DNLIRSSLETGIPRDQRAMTEARNQQQQASSQQQIPESMRSKALIDQLCRNS-RRTPVPR 1343
Query: 2369 PSPRKDEAPKTKRGKKNSAVPP 2390
+ E ++ RG S P
Sbjct: 1344 LAQDSSE-DESYRGPSASGGRP 1364
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 31.9 bits (69), Expect = 0.092
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 156 KNRSVIVGKKRGRKPKQKIMGTRKPSSPPQTYLQEDILSTNMLSNQTEDEESLEINKNHH 215
+N++++ K K++ + K ++P + + + ++S++ E ++S E N N H
Sbjct: 764 RNKALLPVIKPANVNKEQSPNSTKETTPKKER-KTATTTQPVISSRKEQKKSEEKNINDH 822
Query: 216 NRPSKDKIFETNQTTTSEADSTNNIEMS 243
++ + TN TTT +T+ I MS
Sbjct: 823 CVTTEQSVVVTNVTTTINTPTTSVISMS 850
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 29.9 bits (64), Expect = 0.37
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 660 LNDEDENIQSYISENEQKNCFIETENQISN--NDEICMLPLNSNNTN 704
+N EDEN+Q YI +K F++ + + + EI + LN N N
Sbjct: 52 INIEDENVQLYIECAMKKFSFVDKDGNFNEHVSREIAKIFLNENEIN 98
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 29.5 bits (63), Expect = 0.49
Identities = 18/80 (22%), Positives = 32/80 (40%)
Query: 212 KNHHNRPSKDKIFETNQTTTSEADSTNNIEMSAECTNSSNDLKMKICPKAKEKIFPSHSY 271
+N H RPSK+ I + S +S N + +S N+ + K + +E+ +
Sbjct: 23 QNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSKNEQQRKEMEQMREREREQREH 82
Query: 272 KDLTTQLSNQDIRNQHNSSK 291
D T Q + Q +
Sbjct: 83 SDRVTSQQQQQQQQQQQQDQ 102
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 27.5 bits (58), Expect = 2.0
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 617 QEINDGLQIVQSPTVPKTSTTYSENKEPSNKSETQVTESQVITLNDEDENIQSYISENEQ 676
+E+ G+Q +Q V +T T S K +V V N EDEN+QSY+ +
Sbjct: 20 EELKTGIQTLQPICVGETGT--------SQKIIDEVYNGNV---NVEDENVQSYVECMMK 68
Query: 677 K-NCFIETEN-QISNNDEICMLPLNSNNTN 704
K N E N N +I L+ N T+
Sbjct: 69 KFNVVDENGNFNEKNTRDIVQAVLDDNETD 98
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 463 KSLNVDKNQSEATNHVLLIAQNSTVLKTPIISEDNLEFKSSDIVKSQVL 511
KSLN+ + E +H + S + K P+I+ +LE D++ +VL
Sbjct: 451 KSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGSLEV---DVIDGRVL 496
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 2899 IIQRNKKTGLNTAINGHPKGSLEQKDDSNVE 2929
I Q NK+T N A HP + +D +E
Sbjct: 336 ITQSNKRTAGNLATREHPSRNFTMSEDGMIE 366
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.4 bits (53), Expect = 8.0
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 1567 EDAKRAKLVNEFIERRGDGLDSRKRTRNPRYRKSKKFLLERE-KQLKTLSKE 1617
+D + KL NE E+ + SRKR R R+ K + ERE ++ + SKE
Sbjct: 15 KDRRYEKLHNEK-EKLLEERTSRKRYSRSREREQKSYKNEREYRKYRETSKE 65
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.4 bits (53), Expect = 8.0
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 1567 EDAKRAKLVNEFIERRGDGLDSRKRTRNPRYRKSKKFLLERE-KQLKTLSKE 1617
+D + KL NE E+ + SRKR R R+ K + ERE ++ + SKE
Sbjct: 15 KDRRYEKLHNEK-EKLLEERTSRKRYSRSREREQKSYKNEREYRKYRETSKE 65
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 17 DAFEEFQCVSMSAQQKYIKLSDLVSPQSSPCDYNSD 52
DA EE+ + + Q YI SDLV+ P N D
Sbjct: 286 DASEEYSYLRLKGQMLYIPESDLVTFLCYPSVMNLD 321
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 17 DAFEEFQCVSMSAQQKYIKLSDLVSPQSSPCDYNSD 52
DA EE+ + + Q YI SDLV+ P N D
Sbjct: 286 DASEEYSYLRLKGQMLYIPESDLVTFLCYPSVMNLD 321
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.311 0.127 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 889,304
Number of Sequences: 429
Number of extensions: 37743
Number of successful extensions: 100
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 93
Number of HSP's gapped (non-prelim): 12
length of query: 3376
length of database: 140,377
effective HSP length: 71
effective length of query: 3305
effective length of database: 109,918
effective search space: 363278990
effective search space used: 363278990
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 53 (25.4 bits)
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