Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001851-TA|BGIBMGA001851-PA|undefined
(558 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.26
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.26
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 2.4
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 2.4
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 2.4
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 24 2.4
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 24 3.2
AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine 3-mon... 22 9.7
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 22 9.7
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 22 9.7
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 27.5 bits (58), Expect = 0.26
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 446 LVKSYNDLERDIKEAKEGIEDGFRVREEKLREIEQSMRPLVDYIW 490
L+ YN LER + E +E F + +++ ++++ + L+ IW
Sbjct: 11 LLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNIW 55
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 27.5 bits (58), Expect = 0.26
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 446 LVKSYNDLERDIKEAKEGIEDGFRVREEKLREIEQSMRPLVDYIW 490
L+ YN LER + E +E F + +++ ++++ + L+ IW
Sbjct: 11 LLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNIW 55
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.2 bits (50), Expect = 2.4
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 446 LVKSYNDLERDIKEAKEGIEDGFRVREEKLREIEQSMRPLVDYIW 490
L+ YN LER + E +E F + +++ ++++ + L W
Sbjct: 11 LLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAW 55
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.2 bits (50), Expect = 2.4
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 446 LVKSYNDLERDIKEAKEGIEDGFRVREEKLREIEQSMRPLVDYIW 490
L+ YN LER + E +E F + +++ ++++ + L W
Sbjct: 11 LLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAW 55
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.2 bits (50), Expect = 2.4
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 446 LVKSYNDLERDIKEAKEGIEDGFRVREEKLREIEQSMRPLVDYIW 490
L+ YN LER + E +E F + +++ ++++ + L W
Sbjct: 11 LLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAW 55
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 24.2 bits (50), Expect = 2.4
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 166 ECIRLADEVEDMTSAVIEVVGNTMDVYGNCGEKDTAPN-YFTFGPFDQYKQLQEL 219
E +RLA E +IE N D GN GE N Y+ P DQY+ Q L
Sbjct: 139 ETLRLAVEYIRSLKQMIEDHEN--DTTGNSGEGSLQENRYYNNSP-DQYQSYQIL 190
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 23.8 bits (49), Expect = 3.2
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 243 DNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQLSMNILEAQTA 302
+N L++ + + L+E K ++AK++ + NP + QL L +
Sbjct: 249 ENRYLTERRRQQLSAELGLNE-AQIKIWFQNKRAKIKKASGTKNPLALQLMAQGLYNHST 307
Query: 303 VQLLEQEEGIINLQ 316
+ L ++EE + +Q
Sbjct: 308 IPLTKEEEELQEMQ 321
>AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 290
Score = 22.2 bits (45), Expect = 9.7
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 313 INLQIENAIKEFVEDRTRIVEETALNAALAIREEVSNDLAYLLDTTQHALVLDKVLYSAL 372
IN+ + N ++ + R +E+ L +A+ ++ + +DL + + + + +YS
Sbjct: 52 INMALSNRGRKAL--RAVGIEKIILESAIPMKGRLLHDLKGRTTSVPYDALTGQCIYSIS 109
Query: 373 RHELHNI 379
R L+N+
Sbjct: 110 RDYLNNV 116
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 22.2 bits (45), Expect = 9.7
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 313 INLQIENAIKEFVEDRTRIVEETALNAALAIREEVSNDLAYLLDTTQHALVLDKVLYSAL 372
IN+ + N ++ + R +E+ L +A+ ++ + +DL + + + + +YS
Sbjct: 52 INMALSNRGRKAL--RAVGIEKIILESAIPMKGRLLHDLKGRTTSVPYDALTGQCIYSIS 109
Query: 373 RHELHNI 379
R L+N+
Sbjct: 110 RDYLNNV 116
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 22.2 bits (45), Expect = 9.7
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 313 INLQIENAIKEFVEDRTRIVEETALNAALAIREEVSNDLAYLLDTTQHALVLDKVLYSAL 372
IN+ + N ++ + R +E+ L +A+ ++ + +DL + + + + +YS
Sbjct: 52 INMALSNRGRKAL--RAVGIEKIILESAIPMKGRLLHDLKGRTTSVPYDALTGQCIYSIS 109
Query: 373 RHELHNI 379
R L+N+
Sbjct: 110 RDYLNNV 116
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.314 0.130 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,930
Number of Sequences: 317
Number of extensions: 4944
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 10
length of query: 558
length of database: 114,650
effective HSP length: 60
effective length of query: 498
effective length of database: 95,630
effective search space: 47623740
effective search space used: 47623740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 45 (22.2 bits)
- SilkBase 1999-2023 -