Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001851-TA|BGIBMGA001851-PA|undefined
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 44 3e-04
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 44 4e-04
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 38 0.023
At5g27220.1 68418.m03247 protein transport protein-related low s... 37 0.031
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 37 0.040
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 36 0.053
At1g66235.1 68414.m07518 expressed protein ; expression supporte... 35 0.12
At4g06603.1 68417.m01028 expressed protein 35 0.16
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 34 0.28
At5g28430.1 68418.m03453 hypothetical protein 34 0.28
At4g37210.1 68417.m05268 tetratricopeptide repeat (TPR)-containi... 34 0.28
At3g17360.1 68416.m02218 kinesin motor protein-related similar t... 34 0.28
At2g37420.1 68415.m04589 kinesin motor protein-related 34 0.28
At1g28530.2 68414.m03507 expressed protein 33 0.50
At1g28530.1 68414.m03508 expressed protein 33 0.50
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 33 0.66
At2g33435.1 68415.m04098 RNA recognition motif (RRM)-containing ... 33 0.66
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 32 0.87
At1g03080.1 68414.m00282 kinase interacting family protein simil... 32 0.87
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 32 1.1
At4g00160.1 68417.m00016 F-box family protein contains F-box dom... 32 1.1
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 32 1.1
At3g13000.2 68416.m01620 expressed protein contains Pfam profile... 32 1.1
At3g13000.1 68416.m01619 expressed protein contains Pfam profile... 32 1.1
At3g09350.1 68416.m01109 armadillo/beta-catenin repeat family pr... 32 1.1
At5g52280.1 68418.m06488 protein transport protein-related low s... 31 1.5
At3g60930.1 68416.m06816 expressed protein 31 1.5
At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing ... 31 1.5
At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing ... 31 1.5
At1g67270.1 68414.m07656 hypothetical protein 31 1.5
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 31 2.0
At2g45910.1 68415.m05709 protein kinase family protein / U-box d... 31 2.0
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 31 2.0
At5g66310.1 68418.m08360 kinesin motor family protein contains P... 31 2.7
At5g49880.1 68418.m06177 mitotic checkpoint family protein simil... 31 2.7
At4g32190.1 68417.m04581 centromeric protein-related low similar... 31 2.7
At4g31570.1 68417.m04483 expressed protein 31 2.7
At2g43840.1 68415.m05449 UDP-glucoronosyl/UDP-glucosyl transfera... 31 2.7
At5g27330.1 68418.m03263 expressed protein 30 3.5
At3g54280.1 68416.m05999 SNF2 domain-containing protein / helica... 30 3.5
At5g48520.1 68418.m05999 expressed protein similar to unknown pr... 30 4.6
At5g25180.1 68418.m02985 cytochrome P450 71B14, putative (CYP71B... 30 4.6
At5g05180.1 68418.m00551 expressed protein 30 4.6
At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical... 30 4.6
At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical... 30 4.6
At4g11100.1 68417.m01802 expressed protein 30 4.6
At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger) fa... 30 4.6
At3g01230.1 68416.m00029 expressed protein 30 4.6
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 30 4.6
At1g59540.1 68414.m06694 kinesin motor protein-related similar t... 30 4.6
At5g05180.2 68418.m00552 expressed protein 29 6.1
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 29 6.1
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 29 6.1
At1g43190.1 68414.m04977 polypyrimidine tract-binding protein, p... 29 6.1
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 6.1
At5g65800.1 68418.m08279 1-aminocyclopropane-1-carboxylate synth... 29 8.1
At5g51330.1 68418.m06364 meiosis protein-related (DYAD) (SWI1) a... 29 8.1
At5g28730.1 68418.m03529 hypothetical protein 29 8.1
At1g78240.1 68414.m09118 dehydration-responsive protein-related ... 29 8.1
At1g25350.1 68414.m03145 glutamine-tRNA ligase, putative / gluta... 29 8.1
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 44.0 bits (99), Expect = 3e-04
Identities = 99/513 (19%), Positives = 207/513 (40%), Gaps = 47/513 (9%)
Query: 64 EIQKRNVHKDNVLSQNEVDESISLIQSQYPGICLPGDVDALAEMKQDIEMQKEKFNLLAK 123
E + + + NV + N+++++ + IQ L ++ L + + E + E +L+
Sbjct: 181 EEENKAISSKNVETMNKLEQTQNTIQE------LMAELGKLKDSHR--EKESELSSLVEV 232
Query: 124 HERIVKDLIKQKEGINEQLNLE---ITKLNAAQQQICDEEKSLAQECIRLADEVEDMTSA 180
HE +D + + EQ+ + +LN +E+K L+Q+ L++E+++ +
Sbjct: 233 HETHQRDSSIHVKELEEQVESSKKLVAELNQTLNNAEEEKKVLSQKIAELSNEIKEAQNT 292
Query: 181 VIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQLQ--------ELYLSHFDLYVSK-K 231
+ E+V + + + KD + F+ + Q + E L + +S
Sbjct: 293 IQELVSESGQLKESHSVKDR--DLFSLRDIHETHQRESSTRVSELEAQLESSEQRISDLT 350
Query: 232 FDLKQNE-------SKNYD-NEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVAN 283
DLK E SKN + + L QA+N + L + L E D E ++++L +
Sbjct: 351 VDLKDAEEENKAISSKNLEIMDKLEQAQNTIKELMDELGELKDRHKE---KESELSSLVK 407
Query: 284 YNNPHSNQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAI 343
+ + ++ A+ ++L Q I+ +I+ A K E + E L + +
Sbjct: 408 SADQQVADMKQSLDNAEEEKKMLSQRILDISNEIQEAQKTIQE---HMSESEQLKESHGV 464
Query: 344 REEVSNDLAYLLDTTQHALVLDKVLYSALRHELHNIEEFLLFAAQLKQYVLDENDAVTSR 403
+E L + +T Q S L +L +E+ ++ + +E +++S
Sbjct: 465 KERELTGLRDIHETHQRE---SSTRLSELETQLKLLEQRVVDLSASLNAAEEEKKSLSSM 521
Query: 404 ICSMNEICREQASCEQKLEHSDVLLTSLCTVLGIEPTTNVMILVKSYNDLERDIKEAKEG 463
I + + ++ S Q+L T E ++ V + D +KE +
Sbjct: 522 ILEITDELKQAQSKVQELVTELAESKDTLTQKENELSSFVEVHEAHKRDSSSQVKELEAR 581
Query: 464 IEDGFRVREEKLREIEQSMRPLVDYIWDGCTKQPSSTDKTVAALAHQLEHEMSKTDTRIL 523
+E EE+++E+ Q++ + Q S A E+S R+
Sbjct: 582 VESA----EEQVKELNQNLNSSEEE--KKILSQQISEMSIKIKRAESTIQELSSESERLK 635
Query: 524 A--ANSDNQLRKLWQWFLTDPSKLMSVIKGVQS 554
A DN+L L T +L + ++G+++
Sbjct: 636 GSHAEKDNELFSLRDIHETHQRELSTQLRGLEA 668
Score = 40.7 bits (91), Expect = 0.002
Identities = 96/505 (19%), Positives = 208/505 (41%), Gaps = 53/505 (10%)
Query: 77 SQNEVDESISLIQSQYPGICLPGD------VDALAEMKQDIEMQKEKFNLLAK----HER 126
S E ++S+SL S+ + G + L EMK+ + ++ + + L + HER
Sbjct: 3 SAEEENKSLSLKVSEISDVIQQGQTTIQELISELGEMKEKYKEKESEHSSLVELHKTHER 62
Query: 127 IVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQECIRLADEVEDMTSAVIEVVG 186
+K+ E E + + +E+K L+Q+ L++E+++ + + E++
Sbjct: 63 ESSSQVKELEAHIESSEKLVADFTQSLNNAEEEKKLLSQKIAELSNEIQEAQNTMQELMS 122
Query: 187 NTMDVYGNCGEKDTAPNYFTFGPFDQYK---------------QLQELYLSHFDLYVSKK 231
+ G E + F D ++ QL+ DL S K
Sbjct: 123 ES----GQLKESHSVKERELFSLRDIHEIHQRDSSTRASELEAQLESSKQQVSDLSASLK 178
Query: 232 FDLKQNESKNYDN-EVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSN 290
++N++ + N E +++ + + + E ++E K ++++L + + H
Sbjct: 179 AAEEENKAISSKNVETMNKLEQTQNTIQELMAELGKLKDSHREKESELSSLVEVHETHQR 238
Query: 291 QLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVE-ETALNAALAIREEVSN 349
S+++ E + V+ ++ +N + NA +E +I E + A +E+ +
Sbjct: 239 DSSIHVKELEEQVESSKKLVAELNQTLNNAEEEKKVLSQKIAELSNEIKEAQNTIQELVS 298
Query: 350 DLAYLLDTTQHALVLDKVLYSALR--HELHNIEEFLLFA---AQL---KQYVLDENDAVT 401
+ L ++ H+ V D+ L+S LR HE H E + AQL +Q + D +
Sbjct: 299 ESGQLKES--HS-VKDRDLFS-LRDIHETHQRESSTRVSELEAQLESSEQRISDLTVDLK 354
Query: 402 SRICSMNEICREQASCEQKLEHSDVLLTSLCTVLG------IEPTTNVMILVKSYNDLER 455
I + KLE + + L LG E + + LVKS +
Sbjct: 355 DAEEENKAISSKNLEIMDKLEQAQNTIKELMDELGELKDRHKEKESELSSLVKSADQQVA 414
Query: 456 DIKEAKEGIEDGFRVREEKL----REIEQSMRPLVDYIWDGCTKQPSSTDKTVAALAHQL 511
D+K++ + E+ ++ +++ EI+++ + + +++ + + S K +
Sbjct: 415 DMKQSLDNAEEEKKMLSQRILDISNEIQEAQKTIQEHMSESEQLKESHGVKERELTGLRD 474
Query: 512 EHEMSKTDTRILAANSDNQLRKLWQ 536
HE + ++ + + QL+ L Q
Sbjct: 475 IHETHQRESSTRLSELETQLKLLEQ 499
Score = 40.7 bits (91), Expect = 0.002
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 25/249 (10%)
Query: 101 VDALAEMKQDIEMQKEKFNLLAK----HERIVKDLIKQKEGINEQLNLEITKLNAAQQQI 156
V LAE K + ++ + + + H+R +K+ E E ++ +LN
Sbjct: 540 VTELAESKDTLTQKENELSSFVEVHEAHKRDSSSQVKELEARVESAEEQVKELNQNLNSS 599
Query: 157 CDEEKSLAQECIRLADEVEDMTSAVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQL 216
+E+K L+Q+ ++ +++ S + E+ + + G+ EKD F+ + Q
Sbjct: 600 EEEKKILSQQISEMSIKIKRAESTIQELSSESERLKGSHAEKDN--ELFSLRDIHETHQR 657
Query: 217 Q--------ELYL---SHFDLYVSKKFDLKQNESKNYDNEVLSQAKNMER---RLSEALS 262
+ E L H L +S+ + ES+ ++ + +ER + E +
Sbjct: 658 ELSTQLRGLEAQLESSEHRVLELSESLKAAEEESRTMSTKISETSDELERTQIMVQELTA 717
Query: 263 EYIDSKAELCGEQAKLELVANYNNPHSNQLSMNILEAQTAVQLLEQEE---GIINLQIEN 319
+ K +L +++KL L+ ++ +Q+ + LEA A LE E II+L+ E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDS--KSQVQIKELEATVATLELELESVRARIIDLETEI 775
Query: 320 AIKEFVEDR 328
A K V ++
Sbjct: 776 ASKTTVVEQ 784
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 43.6 bits (98), Expect = 4e-04
Identities = 76/368 (20%), Positives = 156/368 (42%), Gaps = 33/368 (8%)
Query: 104 LAEMKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSL 163
LAE K +I+ QKE+ R +L + I E+LN IT L A ++ + S+
Sbjct: 313 LAEAKLEIKQQKEELI------RTQSELDSKNSAI-EELNTRITTLVAEKESYIQKLDSI 365
Query: 164 AQECIRLADEVEDMTSAVIEVVGNTMDVYGNCGEK-DTAPNYFTFGPFDQYKQLQELYLS 222
+++ L E +A E++ E D A + D+ L E Y
Sbjct: 366 SKDYSALKLTSETQAAADAELISRKEQEIQQLNENLDRALDDVNKSK-DKVADLTEKYED 424
Query: 223 HFDLYVSKKFDLKQNESKNYDNEVLSQAKNMER---RLSEALSEYIDSKAELCGE-QAKL 278
+ D++ KN +E+ K ++ R+S+ L +D LC + +++L
Sbjct: 425 S-----KRMLDIELTTVKNLRHELEGTKKTLQASRDRVSD-LETMLDESRALCSKLESEL 478
Query: 279 ELVANYNNPHSNQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETALN 338
+V + N L+A+ + E + + +K+ +E T ++E+++
Sbjct: 479 AIVHEEWKEAKERYERN-LDAEKQKNEISASELALEKDLRRRVKDELEGVTHELKESSVK 537
Query: 339 AALAIREEVSNDLAYLLDTTQHALVLDKVLYSALRHELHNIEEFLLFAAQLKQYVLDEND 398
+E V ++ ++T+ L +K +L E+ +E+ +L + ++ + E D
Sbjct: 538 NQSLQKELV--EIYKKVETSNKELEEEKKTVLSLNKEVKGMEKQILMEREARKSL--ETD 593
Query: 399 AVTSRICSMNEICREQASCEQKLEHSDVLLTSLCTVLGIEPTTNVMILVKSYNDLERDIK 458
+ + S++E+ + + ++LE + ++L +L +S + + K
Sbjct: 594 -LEEAVKSLDEMNKNTSILSRELEKVNTHASNL--------EDEKEVLQRSLGEAKNASK 644
Query: 459 EAKEGIED 466
EAKE +ED
Sbjct: 645 EAKENVED 652
>At4g14760.1 68417.m02271 M protein repeat-containing protein
contains Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 37.5 bits (83), Expect = 0.023
Identities = 65/322 (20%), Positives = 141/322 (43%), Gaps = 25/322 (7%)
Query: 126 RIVKDLIKQKEGINEQLNLEITKLNAAQ-------QQICDEEKSLAQECIRLADEVEDMT 178
R+ +D +Q E + L E+ KLN QQ + L +E D + ++
Sbjct: 282 RVFRDQSEQAETEIKALKQELLKLNEVNEDLNVRYQQCLETISKLEREVSHAQDNAKRLS 341
Query: 179 SAVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQL--QELYLSHFDLYVSKKFDLKQ 236
S V+ V C ++ + ++ ++ LS + K + Q
Sbjct: 342 SEVLAGAAKIKTVEEQCALLESFNQTMKVEAENLAHKMSAKDQELSQKQNEIEKLQAVMQ 401
Query: 237 NESKNYDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQLSMNI 296
E + +E+ + +N+E S++ E +EL ++++++ +S +L +I
Sbjct: 402 EEQLRF-SELGASLRNLESLHSQSQEEQKVLTSEL---HSRIQMLRELEMRNS-KLEGDI 456
Query: 297 LEAQTAVQLLEQEEGIINLQIE-NAIKEFVEDRTRIVEETA--LNAALAIREEVSNDLAY 353
+ L E + I+L+I+ N I + + ++ EE A +N + A++ E+ + +
Sbjct: 457 SSKEENRNLSEINDTSISLEIQKNEISCLKKMKEKLEEEVAKQMNQSSALQVEI-HCVKG 515
Query: 354 LLDTT--QHALVLDKVLYS-----ALRHELHNIEEFLLFAAQLKQYVLDENDAVTSRICS 406
+D+ ++ ++D+V + +L + + +++ +L DEN+AVT ++C
Sbjct: 516 NIDSMNRRYQKLIDQVSLTGFDPESLSYSVKKLQDENSKLVELCTNQRDENNAVTGKLCE 575
Query: 407 MNEICREQASCEQKLEHSDVLL 428
M+ I + A E+ L S+ L
Sbjct: 576 MDSILKRNADLEKLLLESNTKL 597
Score = 29.9 bits (64), Expect = 4.6
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 304 QLLEQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAIREEVSNDLAYLLDTTQHALV 363
++ E+ E + + ++++E R VE L L +E+ S L +L+ Q L
Sbjct: 1049 EMAEEVEDFV--ETVSSLREISTGLKRKVE--TLEKKLEGKEKESQGLNKMLENLQEGLE 1104
Query: 364 LDKVLYSALRHELHNIEEFL 383
D L L H++ N++E L
Sbjct: 1105 EDNFLTGLLEHQVSNVDEIL 1124
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 37.1 bits (82), Expect = 0.031
Identities = 96/503 (19%), Positives = 206/503 (40%), Gaps = 41/503 (8%)
Query: 63 EEIQKRNVHKDNVLSQNEVDESISLIQSQ-YPGICLPGDVDALAEMKQDIEMQKEKF--N 119
EEI+++ KD L N++ + I+++ I G+V+ + +++ EK+ +
Sbjct: 186 EEIERKT--KDLTLVMNKIVDCDKRIETRSLELIKTQGEVELKEKQLDQMKIDLEKYCVD 243
Query: 120 LLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQECIRLADEVEDMTS 179
+ A+ + + + +++ + E++ + L +I + EK + + L ++
Sbjct: 244 VNAEKKNLGRTQTHRRK-LEEEIERKTKDLTLVMDKIAECEKLFERRSLELIKTQGEVEL 302
Query: 180 AVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQLQELYLSHFDLYVSKKFDLKQNES 239
++ +D+ + GE + + + +E+ +L + ++
Sbjct: 303 KGKQLEQMDIDLERHRGEVNVVMEHLEKSQTRSRELAEEIERKRKELTAVLDKTAEYGKT 362
Query: 240 -KNYDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQLSMNILE 298
+ + E+ Q K ++ R SE +S+ K EL G LELV + N N+L +
Sbjct: 363 IELVEEELALQQKLLDIRSSELVSK----KKELDGLSLDLELVNSLN----NELKETVQR 414
Query: 299 AQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAIREEVSNDLAYLLDTT 358
++ + LE E +I Q + E ++ ++EE + LAI+EE N++A +
Sbjct: 415 IESKGKELEDMERLI--QERSGHNESIK---LLLEEH--SEELAIKEERHNEIAEAVRKL 467
Query: 359 QHALVLDKVLYSALRHELHNIEEFLLFAAQLKQYVLDENDAVTSRICSMNEICREQASCE 418
+V + L + H+ + L + + E + + +CS+ + RE C
Sbjct: 468 SLEIVSKEKTIQQLSEKQHSKQTKLDSTEKCLEETTAELVSKENELCSVKDTYRE---CL 524
Query: 419 QKLEHSDVLLTSLCTVLGIEPTTNVMILVKSYNDLERDIKEAKEGI-----EDGFR---- 469
Q E + L S E + +K + E ++ + KE + E G +
Sbjct: 525 QNWEIKEKELKSF-----QEEVKKIQDSLKDFQSKEAELVKLKESLTEHEKELGLKKKQI 579
Query: 470 -VREEKLREIEQSMRPLVDYIWDGCTKQPSSTDKTVAALAHQLEHEMSKTDTRILAANSD 528
VR EK+ E++ + D +Q S ++ +A + E K + N D
Sbjct: 580 HVRSEKI-ELKDKKLDAREERLDKKDEQLKSAEQKLAKCVKEYELNAKKLASFCQQNNPD 638
Query: 529 NQLRKLWQWFLTDPSKLMSVIKG 551
Q+ + + D L +++G
Sbjct: 639 QQVDLVRDASVCDEKTLQLLLRG 661
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 36.7 bits (81), Expect = 0.040
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 8/190 (4%)
Query: 286 NPHSNQLSMNILEAQTAVQLLEQEEGIINLQIENAIK--EFVEDRTRIVEETALNAALAI 343
N + L + +A ++ ++E + L++++A+K + VE+ + I + A+ A +
Sbjct: 111 NERISSLEKDKAKALDELKQAKKEAEQVTLKLDDALKAQKHVEENSEIEKFQAVEAGIEA 170
Query: 344 REEVSNDLAYLLDTTQHALVLDKVLYSALRHELHNIEEFLLFAAQLKQYVLDENDAVTSR 403
+ +L L+T ++ D A+R EL I E L A K L + + +
Sbjct: 171 VQNNEEELKKELETVKNQHASDSAALVAVRQELEKINEELAAAFDAKSKALSQAEDASKT 230
Query: 404 ICSMNEICREQAS-CEQKLEHSDVLLTSLCTVLGIEPTTNVMILVKSYNDLERDIKEAKE 462
EI E+ +L LL S I V L L+RD++ A+
Sbjct: 231 A----EIHAEKVDILSSELTRLKALLDSTREKTAISDNEMVAKLEDEIVVLKRDLESAR- 285
Query: 463 GIEDGFRVRE 472
G E + +E
Sbjct: 286 GFEAEVKEKE 295
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 98 PGDVDALAEMKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQIC 157
P L+++K+D++ E+ + L K + D +KQ + EQ+ L++ AQ+ +
Sbjct: 94 PQTTTRLSQIKEDLKKANERISSLEKDKAKALDELKQAKKEAEQVTLKLDDALKAQKHV- 152
Query: 158 DEEKS 162
EE S
Sbjct: 153 -EENS 156
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 36.3 bits (80), Expect = 0.053
Identities = 92/488 (18%), Positives = 208/488 (42%), Gaps = 45/488 (9%)
Query: 1 MNALDKLSDKEFIPFLRTLGVDTRNQSFEWMLNNSEFASALEWMYYHLDYNNVL-SETEK 59
+ +L++LS+K + L++ + + + + E+ + + L+ ++ SE E+
Sbjct: 159 LKSLEELSEK--VSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEE 216
Query: 60 RRFEEIQKRNVHKD--NVLSQNEVDESISLIQSQYPGICLPGDVDALAEMKQDIEMQKEK 117
+QK H+D NV ++ V+ SQ ++ E +D+E + K
Sbjct: 217 DLRIALQKGAEHEDIGNVSTKRSVELQGLFQTSQLK-------LEKAEEKLKDLEAIQVK 269
Query: 118 FNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQECIRLADEVEDM 177
+ L E + ++++ ++E LN + KL ++++++ + + + + R + E+E +
Sbjct: 270 NSSL---EATLSVAMEKERDLSENLNAVMEKLKSSEERLEKQAREIDEATTR-SIELEAL 325
Query: 178 TSAVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQLQELYLSHFDLYVSKKFDLKQN 237
V TM+ + + +DT T D ++++ +Y + L++
Sbjct: 326 HKHSELKVQKTMEDFSS---RDTEAKSLTEKSKDLEEKIR-VYEGKLAEACGQSLSLQEE 381
Query: 238 -ESKNYDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAK------LELVANYNNPHSN 290
+ + +NE+L+ N + + L Y+DS+ E E+ +L+ + H N
Sbjct: 382 LDQSSAENELLADTNNQLKIKIQELEGYLDSEKETAIEKLNQKDTEAKDLITKLKS-HEN 440
Query: 291 QL---SMNILEAQ--TAVQLLEQEEGIINLQ-IENAIKEFVEDRTRIVE-ETALNAALAI 343
+ +LEA + +E EE ++ L +E+ I+E ++ + E LN LA
Sbjct: 441 VIEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLAN 500
Query: 344 REEVSNDLAYLL-----DTTQHALVLDKVLYSALRHELHNIEEFLLFAAQLKQYVLDEND 398
+ ++D L + Q A L ++ L +L + E L +Q+ ++N
Sbjct: 501 QGSETDDFQAKLSVLEAEKYQQAKEL-QITIEDLTKQLTSERERL--RSQISSLEEEKNQ 557
Query: 399 AVTSRICSMNEICREQASCEQKLEHSDVLLTSLCTVLGIEPTTNVMILVKSYNDLERDIK 458
+ NE+ + QA + SD +++ + + + +L + +E +K
Sbjct: 558 VNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIEKLSAL--VAEKSVLESKFEQVEIHLK 615
Query: 459 EAKEGIED 466
E E + +
Sbjct: 616 EEVEKVAE 623
Score = 34.7 bits (76), Expect = 0.16
Identities = 34/198 (17%), Positives = 84/198 (42%), Gaps = 9/198 (4%)
Query: 113 MQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQECIRLAD 172
++ EK+ + + ++DL KQ E+L +I+ L + Q+ + +S E ++L
Sbjct: 515 LEAEKYQQAKELQITIEDLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQA 574
Query: 173 EVEDMTSAVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQLQELYLSHFDLYVSKKF 232
+++ S ++V + EK + +++Q++ +
Sbjct: 575 QLQVDKSKSDDMVSQIEKLSALVAEKSVLES--------KFEQVEIHLKEEVEKVAELTS 626
Query: 233 DLKQNESKNYDNEVLSQ-AKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQ 291
L++++ K D +VL + A + + L + + + K L + ++LE + +
Sbjct: 627 KLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEELDA 686
Query: 292 LSMNILEAQTAVQLLEQE 309
I+ ++ + LEQ+
Sbjct: 687 KKSVIVHLESKLNELEQK 704
>At1g66235.1 68414.m07518 expressed protein ; expression supported
by MPSS
Length = 265
Score = 35.1 bits (77), Expect = 0.12
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 22 DTRNQSFEWMLNNSEFASALEWMYYHLDYNNVLSETEKRRFEEIQKRNVHKDNVLSQNEV 81
D NQ+ E ++ + F S W + H+ N++ EK + Q + V L +
Sbjct: 75 DIFNQAKEMLMQDKHFKSG--WKFDHVW--NIIRNFEKFKDGATQAKKVLNLCGLENPTL 130
Query: 82 DESISLIQSQYP-GICLPGDVDALAEMKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINE 140
D + + L + D + ++ +K L K+++I+ D+IK E N+
Sbjct: 131 DSVSQASSGSFSFSLNLDDEDDIIGRSPYQRPIRVKKSKLKRKNDQIL-DVIKTFEEGNK 189
Query: 141 QLNLEITKLNAAQQQICD-EEKSLA 164
QL ++ K +A +QQ + + KSLA
Sbjct: 190 QLMEQLKKTSAQRQQYLEMQSKSLA 214
>At4g06603.1 68417.m01028 expressed protein
Length = 786
Score = 34.7 bits (76), Expect = 0.16
Identities = 31/146 (21%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 245 EVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQLSMNILEAQTAV- 303
E S+ + +ER +EALSE +K E+ ++E A+ N ++ +++ L+A + +
Sbjct: 577 EAESRIQAIEREKNEALSEAAAAKL----EKEEIERTAHVNKENAIKMAEQNLKADSEIV 632
Query: 304 ---QLLEQEEGIINLQIENAIKEFVED--RTRIVEETALNAALAIREEVSNDLAYLLDTT 358
++L +E G+ + + A++ + T I + +++ +EV++ YL
Sbjct: 633 RLKRMLSEERGLRDSDVARAVQTTRREVSETFIAQMKTAEHKVSLLDEVNDRFMYLSQAQ 692
Query: 359 QHALVLDKVLYS-ALRHELHNIEEFL 383
+A +++ + L E ++E+L
Sbjct: 693 ANAQLIEALEGGRVLESEKEQVDEWL 718
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 33.9 bits (74), Expect = 0.28
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 102 DALAEMKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEK 161
+ L + + I Q+E F++ K ER ++ ++++ + Q ++ LN +++ ++
Sbjct: 570 EELRKEAEYITRQREAFSMYLKDER--DNIKEERDALRNQHKNDVESLNREREEFMNKMV 627
Query: 162 SLAQECI-RLADEVEDMTSAVIEVVGNTMDV-YGNCGEKDTAPNYFTFGPFDQYKQLQEL 219
E + ++ E D IE+ ++ N E+ + F+Q K+L+E
Sbjct: 628 EEHSEWLSKIQRERADFLLG-IEMQKRELEYCIENKREELENSSRDREKAFEQEKKLEEE 686
Query: 220 YLSHFDLYVSKKFDLKQNESKNYDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLE 279
+ K+ + Q E K D E L + ERR E +E DS EL ++ KLE
Sbjct: 687 RIQSLKEMAEKELEHVQVELKRLDAERLEIKLDRERRERE-WAELKDSVEELKVQREKLE 745
>At5g28430.1 68418.m03453 hypothetical protein
Length = 486
Score = 33.9 bits (74), Expect = 0.28
Identities = 31/146 (21%), Positives = 73/146 (50%), Gaps = 11/146 (7%)
Query: 245 EVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQLSMNILEAQTAV- 303
E S+ + +ER +EALSE +K E+ ++E +A N ++ +++ L+A + +
Sbjct: 277 EAESRIQAIEREKNEALSEAAAAKL----EREEVERMAYVNKENAIKMAEQNLKANSEIV 332
Query: 304 ---QLLEQEEGIINLQIENAIKEFVED--RTRIVEETALNAALAIREEVSNDLAYLLDTT 358
++L +E G+ + ++ A++ + T I + +++ +EV++ YL
Sbjct: 333 RLKRMLSEERGLRDSEVARAVQTTRREVSETFIAKMKTAEHKVSLLDEVNDRFMYLSQAR 392
Query: 359 QHALVLDKVL-YSALRHELHNIEEFL 383
+A +++ + L E ++E+L
Sbjct: 393 ANAQLIEVLEGGGVLEREKEQVDEWL 418
>At4g37210.1 68417.m05268 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q02508 Protein HGV2
Halocynthia roretzi; contains Pfam profile PF00515 TPR
Domain
Length = 492
Score = 33.9 bits (74), Expect = 0.28
Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 436 GIEPTTNVMILVKSYNDLERDIKEAKEGIEDGFRVREEKLREIEQSMRPLVDYIWDGCTK 495
GI+ ++NV + KS +D E +I + G+ + + E L++ ++ + ++ + +
Sbjct: 341 GIQQSSNVPYIDKSASDKEVEIGDL-AGLAEDLEKKLEDLKQQAENPKQVLAELMGMVSA 399
Query: 496 QPSSTDKTVAALAHQLEHEMSKTDT 520
+P+++DK V A A M +T
Sbjct: 400 KPNASDKVVPAAAEMSSSRMGTVNT 424
>At3g17360.1 68416.m02218 kinesin motor protein-related similar to
KLP2 protein GB:CAA63826 from [Xenopus laevis]
Length = 2008
Score = 33.9 bits (74), Expect = 0.28
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 103 ALAEMKQDIEMQKEKFNLLAKHE----RIVKDLIKQK----EGINEQLNL------EITK 148
AL + D+E K++ +LA+ +V DL K+K EG++EQ +L EI
Sbjct: 1518 ALFTSQSDLEQAKQRIQILAEQNDELRALVSDLCKEKAAAEEGLDEQRDLVNRLEKEILH 1577
Query: 149 LNA-AQQQICDEEKSLAQECIRLADEVEDMTSAVIEVVGNTMDVYGNCGEKD 199
L A++Q+ KS+ + + +DE + + + + Y EK+
Sbjct: 1578 LTTTAEKQLLSAVKSIKENLKKTSDEKDQIVDEICSLNNKLELAYAIADEKE 1629
Score = 29.5 bits (63), Expect = 6.1
Identities = 54/279 (19%), Positives = 117/279 (41%), Gaps = 19/279 (6%)
Query: 215 QLQELYLSHFDLYVSKKFDLKQNESKNYDNEVLSQAKNMERRLSEALSEYIDSKAELCGE 274
Q+ EL++ H + + DLK + + L QAK + L+E E ++LC E
Sbjct: 1497 QVHELFV-HNENLENCSIDLKTALFTSQSD--LEQAKQRIQILAEQNDELRALVSDLCKE 1553
Query: 275 QAKLELVANYNNPHSNQLSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEE 334
+A E + N+L IL T + +Q + I+ +K+ +++ +IV+E
Sbjct: 1554 KAAAEEGLDEQRDLVNRLEKEILHLTTTAE--KQLLSAVK-SIKENLKKTSDEKDQIVDE 1610
Query: 335 -TALNAALAIREEVSNDLAYLLDTTQHALVLDKVLYSALRHELHNIEEFLLFAAQLKQYV 393
+LN L + ++++ + K+ E+ +E + +L++ +
Sbjct: 1611 ICSLNNKLELAYAIADEKEAIAVEAHQESEASKIYAEQKEEEVKILE---ISVEELERTI 1667
Query: 394 LDENDAVTSRICSMNEICREQASCEQKLEHSDVLLTSLCTVLGIEPTTNVMILV-KSYND 452
+ + R+ M+E + + + LE L + E T M+ +S +
Sbjct: 1668 ----NILERRVYDMDEEVKRHRTTQDSLETELQALRQ--RLFRFENFTGTMVTTNESTEE 1721
Query: 453 LERDIKEAK--EGIEDGFRVREEKLREIEQSMRPLVDYI 489
+ I + +G +V ++++ E + ++ L +YI
Sbjct: 1722 YKSHISRSTGLQGAHSQIQVLQKEVAEQTKEIKQLKEYI 1760
>At2g37420.1 68415.m04589 kinesin motor protein-related
Length = 1039
Score = 33.9 bits (74), Expect = 0.28
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 104 LAEMKQDIEMQKEKFNLLAKHERIVKDLIKQKEGIN--EQLNLEITKLNAAQQQICDEEK 161
L MK+D+ ++K + HER ++ +++K I EQL E+ + + CD +
Sbjct: 413 LERMKEDVRAARDKNGVYIAHERYTQEEVEKKARIERIEQLENELNLSESEVSKFCDLYE 472
Query: 162 SLAQECIRLADEVED 176
+ ++ + + +++D
Sbjct: 473 TEKEKLLDVESDLKD 487
>At1g28530.2 68414.m03507 expressed protein
Length = 506
Score = 33.1 bits (72), Expect = 0.50
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 257 LSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQLSMNILE-----AQTAVQLLEQEEG 311
L+EAL Y + L +Q ++ NY N + + +++L+ + + LL
Sbjct: 254 LAEALDIYFEDTYSLPRKQLPCDVPGNYANLPNEKKGLSLLKFISVTMASGIFLLAVSAA 313
Query: 312 IINLQIENAIKEFVEDRTRIV--EETALNAALAIREEVSNDLAYLLDTTQHAL--VLDKV 367
+ + +++ R I+ E L+ + E+ + L++ + A V +
Sbjct: 314 AQFCLPQKSERKYPGKRQEILWSESELLSHQSSDSSELDSFCGLLVNKLKDAYSWVGEIT 373
Query: 368 LYSALRHELHNIEEFLLFAAQLKQYVLDENDAVTSRICSMNEICREQASCE-QKLEHSDV 426
L S++ + + ++L ++ K E+ VTS S+ EI E A Q + V
Sbjct: 374 LESSIGAWIGEVPDYLKETSRAKSV---EDHIVTSS--SLLEILNEDAKASAQDIATYQV 428
Query: 427 LLTSLCTVLGIEPTTNVMILVKSYNDLERDI---KEAKEG-IEDGFRVREEK 474
+L+S ++G +PT+ V + + N L R++ K+ K G IE G + K
Sbjct: 429 VLSSEGKIIGFQPTSRVAVNHWAANPLARELYGGKKLKPGLIEPGLKSHPPK 480
>At1g28530.1 68414.m03508 expressed protein
Length = 614
Score = 33.1 bits (72), Expect = 0.50
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 257 LSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQLSMNILE-----AQTAVQLLEQEEG 311
L+EAL Y + L +Q ++ NY N + + +++L+ + + LL
Sbjct: 362 LAEALDIYFEDTYSLPRKQLPCDVPGNYANLPNEKKGLSLLKFISVTMASGIFLLAVSAA 421
Query: 312 IINLQIENAIKEFVEDRTRIV--EETALNAALAIREEVSNDLAYLLDTTQHAL--VLDKV 367
+ + +++ R I+ E L+ + E+ + L++ + A V +
Sbjct: 422 AQFCLPQKSERKYPGKRQEILWSESELLSHQSSDSSELDSFCGLLVNKLKDAYSWVGEIT 481
Query: 368 LYSALRHELHNIEEFLLFAAQLKQYVLDENDAVTSRICSMNEICREQASCE-QKLEHSDV 426
L S++ + + ++L ++ K E+ VTS S+ EI E A Q + V
Sbjct: 482 LESSIGAWIGEVPDYLKETSRAKSV---EDHIVTSS--SLLEILNEDAKASAQDIATYQV 536
Query: 427 LLTSLCTVLGIEPTTNVMILVKSYNDLERDI---KEAKEG-IEDGFRVREEK 474
+L+S ++G +PT+ V + + N L R++ K+ K G IE G + K
Sbjct: 537 VLSSEGKIIGFQPTSRVAVNHWAANPLARELYGGKKLKPGLIEPGLKSHPPK 588
>At5g48600.1 68418.m06011 structural maintenance of chromosomes (SMC)
family protein similar to SP|P50532 Chromosome assembly
protein XCAP-C {Xenopus laevis}; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 32.7 bits (71), Expect = 0.66
Identities = 43/211 (20%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 100 DVDALAEMKQDIEMQKEKFNLLAKHERIVKDLIKQ--KEGINEQLNLEITKLNAAQQQI- 156
++D L E+K+ I ++++ L K + +KD ++ + E+L + K+ Q I
Sbjct: 797 EIDRLKELKKIISKEEKEIENLEKGSKQLKDKLQTNIENAGGEKLKGQKAKVEKIQTDID 856
Query: 157 --------CDEEKSLAQECI-RLADEVEDMTSAVIEVVGNTMDVYGNCGEKDTAPNYFTF 207
C+ + Q+ I +L +E+ T + G +++ KD F
Sbjct: 857 KNNTEINRCNVQIETNQKLIKKLTKGIEEATREKERLEGEKENLHVTF--KDITQKAFEI 914
Query: 208 GPFDQYKQLQELYLSHFDLYVSKKFDLKQNESKNYDNEVLSQAKNMERRLSEALSEYIDS 267
+ YK+ Q+L H D+ K D +N K+ D E+ + + E ++ + +Y +
Sbjct: 915 Q--ETYKKTQQLIDEHKDVLTGAKSDY-ENLKKSVD-ELKASRVDAEFKVQDMKKKYNEL 970
Query: 268 KAELCGEQAKLELVANYNNPHSNQLSMNILE 298
+ G + KL + H Q+ ++++
Sbjct: 971 EMREKGYKKKLNDLQIAFTKHMEQIQKDLVD 1001
>At2g33435.1 68415.m04098 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 979
Score = 32.7 bits (71), Expect = 0.66
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 72 KDNVLSQNEVDESISLIQSQYPGICLPGDVDALAEMKQDIEMQKEKFNLLAKHERIVKDL 131
++ L + + DES S + + G C + +++ E +D +KE+ N + ER K +
Sbjct: 533 REENLDKQKKDESTSNRKRKAEGECSTAETESIEEHSKDRRGKKEETNSNCREERRDKKM 592
Query: 132 IKQKEGINEQLNLEI----TKLNAAQQQICDEEK 161
K+ N ++ EI TK + +C +++
Sbjct: 593 KKEDLASNRKIEGEIPTTETKTMTDRDGLCSKKR 626
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 32.3 bits (70), Expect = 0.87
Identities = 17/73 (23%), Positives = 38/73 (52%)
Query: 104 LAEMKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSL 163
+ E K +I+ K + +L + ++ + +++G+ E+L ++ KLN + + EEK L
Sbjct: 245 MEEKKNEIDGLKREIKVLLSEKNEMEIVKIEQKGVIEELERKLDKLNETVRSLTKEEKVL 304
Query: 164 AQECIRLADEVED 176
I L +++
Sbjct: 305 RDLVIGLEKNLDE 317
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 32.3 bits (70), Expect = 0.87
Identities = 55/282 (19%), Positives = 126/282 (44%), Gaps = 25/282 (8%)
Query: 236 QNESKNYDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQ---L 292
+++SK+ + LS A ++ + L E +S+ ++ +L +A++EL + N + L
Sbjct: 548 KDQSKSLNELNLSSAASI-KSLQEEVSKLRETIQKL---EAEVELRVDQRNALQQEIYCL 603
Query: 293 SMNILEAQTAVQLLEQEEGIINLQIEN---AIKEFVEDRTRIVE----ETALNAALAIRE 345
+ + Q + ++ ++ L E+ ++KE E+ +++ E E+ AL +
Sbjct: 604 KEELSQIGKKHQSMVEQVELVGLHPESFGSSVKELQEENSKLKEIRERESIEKTALIEKL 663
Query: 346 EVSNDLAYLLDTTQHALVLDKVLYSALRHELHNIEEFLLFAAQLKQYVLDENDAVTSRIC 405
E+ L ++++ +R +L +EE + A+ K + E D + SR+
Sbjct: 664 EMMEKLVQKNLLLENSISDLNAELETIRGKLKTLEEASMSLAEEKSGLHSEKDMLISRLQ 723
Query: 406 SMNE----ICREQASCEQKLEHSDVLLTSLCTVL-GIEPTTNVMILVKSYNDLERDIKEA 460
S E + E E L +++V L L + L +E + +++ ND + +
Sbjct: 724 SATENSKKLSEENMVLENSLFNANVELEELKSKLKSLEESCHLL------NDDKTTLTSE 777
Query: 461 KEGIEDGFRVREEKLREIEQSMRPLVDYIWDGCTKQPSSTDK 502
+E + +++ ++E+ L + + T++ SS K
Sbjct: 778 RESLLSHIDTMRKRIEDLEKEHAELKVKVLELATERESSLQK 819
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 102 DALAEMKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEK 161
+A +++K+ K F+ ++K E +KD K +EG + L I + A Q + K
Sbjct: 752 EAKSQIKEKELAYKNCFDAVSKLENSIKDHDKNREGRLKDLEKNIKTIKAQMQAASKDLK 811
Query: 162 SLAQECIRLADEVEDM 177
S E +L E E M
Sbjct: 812 SHENEKEKLVMEEEAM 827
>At4g00160.1 68417.m00016 F-box family protein contains F-box domain
Pfam:PF00646
Length = 453
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 208 GPFDQYKQLQELYLSHFDLYVSKKFDLKQNESKNYDNEVLSQAKNMER 255
G +++ K + E LSH + +V ++FD + E K +L A+ + +
Sbjct: 354 GKWNEPKYVPECLLSHLETFVWRRFDWGREEEKEIATYILKNARRLNK 401
>At3g17520.1 68416.m02238 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to PIR|S04045|S04045 embryonic
abundant protein D-29 [Gossypium hirsutum]; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 298
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/75 (20%), Positives = 34/75 (45%)
Query: 448 KSYNDLERDIKEAKEGIEDGFRVREEKLREIEQSMRPLVDYIWDGCTKQPSSTDKTVAAL 507
K + ER+ K AKE I++ + + K E +S + +D ++ TV+
Sbjct: 224 KLKEEAERESKSAKEKIKESYETAKSKADETLESAKDKASQSYDSAARKSEEAKDTVSHK 283
Query: 508 AHQLEHEMSKTDTRI 522
+ +++ ++ D +
Sbjct: 284 SKRVKESLTDDDAEL 298
>At3g13000.2 68416.m01620 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 582
Score = 31.9 bits (69), Expect = 1.1
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 238 ESKNYDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPH-SNQLSMNI 296
ES Y ++ K ++ +L + + + + E E+ EL + + PH + +L NI
Sbjct: 44 ESFPYRFQLEEDVKRLQLQLQQEID--LHTFLESVMEKDPWELSYSSSVPHPAQELLSNI 101
Query: 297 LEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAIREEVSNDLAYL-- 354
+ +TAV LEQE +N Q+ E R+ E ++A + S+ L YL
Sbjct: 102 VTLETAVTKLEQEMMSLNFQLSQERNE-----RRLAEYQLTHSASPLNS--SSSLRYLNQ 154
Query: 355 LDTTQHALVLDKVLYSALRHELHNIEEFLLFAAQLKQYVLDENDAVTSRI 404
D+ H D + H + E + ++Q + ND + R+
Sbjct: 155 SDSELHQSAEDSPSQDQIVHYQESSSESSPAESTVEQTLDPSNDFLEKRL 204
>At3g13000.1 68416.m01619 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 553
Score = 31.9 bits (69), Expect = 1.1
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 238 ESKNYDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPH-SNQLSMNI 296
ES Y ++ K ++ +L + + + + E E+ EL + + PH + +L NI
Sbjct: 15 ESFPYRFQLEEDVKRLQLQLQQEID--LHTFLESVMEKDPWELSYSSSVPHPAQELLSNI 72
Query: 297 LEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAIREEVSNDLAYL-- 354
+ +TAV LEQE +N Q+ E R+ E ++A + S+ L YL
Sbjct: 73 VTLETAVTKLEQEMMSLNFQLSQERNE-----RRLAEYQLTHSASPLNS--SSSLRYLNQ 125
Query: 355 LDTTQHALVLDKVLYSALRHELHNIEEFLLFAAQLKQYVLDENDAVTSRI 404
D+ H D + H + E + ++Q + ND + R+
Sbjct: 126 SDSELHQSAEDSPSQDQIVHYQESSSESSPAESTVEQTLDPSNDFLEKRL 175
>At3g09350.1 68416.m01109 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 363
Score = 31.9 bits (69), Expect = 1.1
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 369 YSALRHELHNIE-EFLLFAAQLKQYVLDENDAVTSRICSMN--EICREQASCEQKLEHSD 425
Y+ LR L + F A L QY+L E+D+ S + + AS + E +
Sbjct: 186 YAGLRDALASDSVRFQRKALNLLQYLLQEDDSDRSIATGLGFPRVMMHLASSDDA-EIRE 244
Query: 426 VLLTSLCTVLGIEPTTNVMILVKSYNDLERDIKEAKEGIEDGFRVREEKLREIEQSMRPL 485
L L L E + KS L + ++E +GI + +E L +++ R L
Sbjct: 245 AALRGLLE-LSREKNDGSSSIDKSDEKLRQLLEERIKGIT---LMSQEDLETVKEE-RQL 299
Query: 486 VDYIWDGCTKQPSS 499
VD +W C +PSS
Sbjct: 300 VDLLWSICYNEPSS 313
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 31.5 bits (68), Expect = 1.5
Identities = 58/295 (19%), Positives = 117/295 (39%), Gaps = 24/295 (8%)
Query: 64 EIQKRNVHKDNVLSQNEVDESISLIQSQYPGICLPGDVDALAEMKQDIEMQ--KEKFNLL 121
E++K+++ K + + E + CL G+ D E + + +Q +++ +
Sbjct: 284 ELEKQSLRKQAIKESKRIQELSKEVS------CLKGERDGAMEECEKLRLQNSRDEADAE 337
Query: 122 AKHERIVKDLIKQKEGINEQLNLE--ITKLNAAQQQICDEEKSLAQECIRLADEVEDMTS 179
++ I +D E I ++L+ E +T Q Q E S +R +E+ + +
Sbjct: 338 SRLRCISEDSSNMIEEIRDELSCEKDLTSNLKLQLQRTQESNSNLILAVRDLNEMLEQKN 397
Query: 180 AVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQLQELYLSHFDLYVSKKFD---LKQ 236
I + + ++ E + D KQ E D Y K + L
Sbjct: 398 NEISSLNSLLEEAKKLEEHKGMDS--GNNEIDTLKQQIEDLDWELDSYKKKNEEQEILLD 455
Query: 237 NESKNYDNEVLSQAKNMERRL-----SEALSEYIDSKAELCGEQAKLELVANYNNPHSNQ 291
++ Y++ KN+ +L S A EY+DSK + ++++E++ Q
Sbjct: 456 ELTQEYESLKEENYKNVSSKLEQQECSNAEDEYLDSKDIIDELKSQIEILEG----KLKQ 511
Query: 292 LSMNILEAQTAVQLLEQEEGIINLQIENAIKEFVEDRTRIVEETALNAALAIREE 346
S+ E V LE + + ++E+ + + ED ++ E AI+ E
Sbjct: 512 QSLEYSECLITVNELESQVKELKKELEDQAQAYDEDIDTMMREKTEQEQRAIKAE 566
>At3g60930.1 68416.m06816 expressed protein
Length = 798
Score = 31.5 bits (68), Expect = 1.5
Identities = 30/146 (20%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 245 EVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQLSMNILEAQTAV- 303
E S+ + +ER +EALSE +K E+ ++E A+ N ++ +++ L+A + +
Sbjct: 589 EAESRIQAIEREKNEALSEAAAAKL----EKEEVERTAHVNKENAIKMAEQNLKANSEIV 644
Query: 304 ---QLLEQEEGIINLQIENAIKEFVED--RTRIVEETALNAALAIREEVSNDLAYLLDTT 358
++L + G+ + ++ A++ + T I + +++ +EV++ YL
Sbjct: 645 RLKRMLSEARGLRDSEVARAVQTTRREVSETFIAKMKNAEHKVSLLDEVNDRFMYLSQAR 704
Query: 359 QHALVLDKVL-YSALRHELHNIEEFL 383
+A +++ + L E ++E+L
Sbjct: 705 ANAQLIEALEGGGVLESEKEQVDEWL 730
>At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 22 DTRNQSFEWMLNNSEFASALEWMYYHLDYNNVLSETEKRRFEEIQKRNVHKDN 74
+TR+QS E ++ F+ Y H + N SE EKR F + V DN
Sbjct: 45 ETRSQSLEQDSSDQAFSRPYRKNYRHYENGNSFSEHEKRSFGTGSGQRVQFDN 97
>At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 22 DTRNQSFEWMLNNSEFASALEWMYYHLDYNNVLSETEKRRFEEIQKRNVHKDN 74
+TR+QS E ++ F+ Y H + N SE EKR F + V DN
Sbjct: 45 ETRSQSLEQDSSDQAFSRPYRKNYRHYENGNSFSEHEKRSFGTGSGQRVQFDN 97
>At1g67270.1 68414.m07656 hypothetical protein
Length = 506
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 260 ALSEYIDSKAELCGEQAK-LELVANYNNPHSNQLSMNILEAQTAVQLLEQEEGIINLQIE 318
A+ YI+S+ E CGE+ K + A QL ++ + A ++E+ ++++
Sbjct: 347 AMRNYINSQTEECGERKKEAKQKAAAAKQKEKQLKQK-MQGEVAKSIMEKNGAPLSIEEH 405
Query: 319 NAIKEFVEDRTRIVEETALNA 339
N+I + D + E + A
Sbjct: 406 NSIVSQIRDEAKEAHEEMMEA 426
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 31.1 bits (67), Expect = 2.0
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 13/175 (7%)
Query: 318 ENAIKEFVEDRTRIVEETA--------LNAALAIREEVSNDLAYLLDTTQHALVLDKVLY 369
E+ +K ++D+T++ E A L++ A+ E + + +L++++
Sbjct: 837 ESKLKNSMQDKTKLEAEKASAERELKRLHSQKALLERDISKQESFAGKRRDSLLVERSAN 896
Query: 370 SALRHELHNIE----EFLLFAAQLKQYVLDENDAVTSRICSMNEICREQASCEQKLEHSD 425
+L+ E +E E A L++ + E +C + + E +KLEHS+
Sbjct: 897 QSLQEEFKQLEVLAFEMETTIASLEEELAAERGEKEEALCRNDGLGSEITDLTEKLEHSN 956
Query: 426 VLLTSLCTVLGIEPTTNVMILVKSYNDLERDIKEAKEGIEDGFRVREEKLREIEQ 480
L L + E T + + LE ++K+ E E+ L E+E+
Sbjct: 957 TKLEHLQNDV-TELKTRLEVSSSDQQQLETNVKQLLEEKEELAMHLANSLLEMEE 1010
>At2g45910.1 68415.m05709 protein kinase family protein / U-box
domain-containing protein contains Pfam profiles PF00069
Eukaryotic protein kinase domain, PF04564: U-box
domain; supported by tandem duplication of (GI:3386604)
(TIGR_Ath1:At2g45920) [Arabidopsis thaliana]
Length = 834
Score = 31.1 bits (67), Expect = 2.0
Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Query: 47 HLDYNNVLSETEKRRFEEIQKRNVHKDNVLSQNEVDESISLIQSQYPGICLPGDVDALAE 106
H +ET +R ++ +K + Q+E S L + + I + + +
Sbjct: 323 HSSKQEAFAETLRR--QKAEKNALDAIRRAKQSESAYSEELKRRKDTEIAVAKEKERFIT 380
Query: 107 MKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQE 166
+K + E+ E+ + +++ I + +G E+LN ++ Q++ DE + L E
Sbjct: 381 IKNEQEVIMEELQSAMAQKAMLESQIAKSDGTMEKLNQKLDIAVKLLQKLRDEREELQTE 440
Query: 167 CIRLADEVEDMTS 179
R E E++ S
Sbjct: 441 RDRALREAEELRS 453
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 240 KNYDNEVLSQAKNMERRLSEALSEYIDSKAEL-CGEQAKLELVANYNNPHS--NQLSMNI 296
K++ + + + K +E L + E + K E AKL+++ + QL +N+
Sbjct: 188 KSHRMQAVERRKLIEEELKKIHEEIPEYKTHSETAEAAKLQVLKELESTKRLIEQLKLNL 247
Query: 297 LEAQTAVQLLEQEEGIINLQIENAIKEFVED 327
+AQT Q +Q+ + L++E + ED
Sbjct: 248 DKAQTEEQQAKQDSELAKLRVEEMEQGIAED 278
>At5g66310.1 68418.m08360 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1063
Score = 30.7 bits (66), Expect = 2.7
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 370 SALRHELHNIEEFLLFAAQLKQYVLDEN-DAVTSRICSMNEICREQASCEQKLEH-SDVL 427
S R + LLFA+ K+ + + V S + + RE A E +L S
Sbjct: 320 SPARIHVEQSRNTLLFASCAKEVTTNAQVNVVMSDKALVKHLQRELAKLESELRSPSQAS 379
Query: 428 LTSLCTVLGIEPTTNVMILVKSYNDLERDIKEAKEGIEDGFR-VREEKLREIE 479
+ S T L E V L K L + +++A+ I+D R V EEK +E E
Sbjct: 380 IVSDTTALLTEKDLEVEKLKKEVFQLAQQLEQARSEIKDLRRMVEEEKNQEKE 432
>At5g49880.1 68418.m06177 mitotic checkpoint family protein similar
to mitotic checkpoint protein isoform MAD1a [Homo
sapiens] GI:4580767; contains Pfam profile PF05557:
Mitotic checkpoint protein
Length = 726
Score = 30.7 bits (66), Expect = 2.7
Identities = 76/408 (18%), Positives = 162/408 (39%), Gaps = 35/408 (8%)
Query: 102 DALAEMKQDIEMQKEKFN----LLAKHERI-VKDLIKQKEGINEQLNLEITKLNAAQQQI 156
D L ++ ++ +K++ N L K ++ V + E + + T+ N + Q+
Sbjct: 181 DKLTQLSGSVDREKKRLNNDIAQLGKEAKLSVARIGADLERMQCRAQNAETESNLLRSQL 240
Query: 157 CDEEKSLAQECIRLADEVEDMTSAVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQL 216
+ K + EC++ EV+ S+ ++ D + K + + ++
Sbjct: 241 -EHLKLIFDECLQEKTEVDKKLSSFTSEAASSSD--NSVLVKHLQEELKRYEA--EVREA 295
Query: 217 QELYLSHFDLYVSKKFDLKQNESKNYDNEVLSQAKNME---RRLSEALSEYIDSKAELCG 273
++L H D + L++ + LS+ +++ +L LS + ++ G
Sbjct: 296 RKLKSRHLDAELLNVNLLEEQSRRERAESELSKFHDLQLSMEKLENELSSWKSLLNDIPG 355
Query: 274 EQAKLELVANYNNPHSN--QLSMNILEAQTAVQLLEQEEGIINLQIENAIKE--FVEDRT 329
++V ++ + Q +M I EA T ++ LE+ I L +NA+ E ++++
Sbjct: 356 VSCPDDIVMRFSVLQNEVVQSTMKIGEASTRIKQLEETLEAIQLGRQNAVSEAALAKEKS 415
Query: 330 RIVE------ETALNAALAIREE---VSNDLAYLLDTTQHALVLDKVLYSALRHELHNIE 380
++ E L +E+ V N+L + D L L E
Sbjct: 416 EALKTDVKRIEVMLTLVTEEKEQLKAVVNELRKSNSEGSVSGAADGALIQGFESSLAKKE 475
Query: 381 EFLLFAAQLKQYVLDENDAVTSRICSMNEICREQASCEQKLEHSDVLLTSLCTVL----- 435
++ Q + D N+ + I +NE ++A + LE L S ++L
Sbjct: 476 NYIKDLEQDLNQLKDVNNRQRTEIELLNEKLVDEARRNKSLERDSDRLRSEISLLESKLG 535
Query: 436 -GIEPTTNVMILVKSYNDL--ERDIKEAKEGIEDGFRVREEKLREIEQ 480
G N +L + N L E + K+ E ++ + +E+L+ +E+
Sbjct: 536 HGDYSAANTRVL-RMVNTLGVENEAKQTIEALQAELQKTKERLQAVEE 582
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 30.7 bits (66), Expect = 2.7
Identities = 56/305 (18%), Positives = 126/305 (41%), Gaps = 22/305 (7%)
Query: 63 EEIQKRNVHKDNVLSQNEVDESISLIQSQYPGICLPGDVDALAEMKQDIEMQKEKFNLLA 122
E ++ R V N + E+ L++ L + L DI + +++ A
Sbjct: 390 ERVKLRVVEAKNFALEREISVQKELLEDLREE--LQKEKPLLELAMHDISVIQDELYKKA 447
Query: 123 KHERIVKDLIKQKEGINEQLNLEITKLNAAQQQ----ICDEEKSLAQECIRLAD---EVE 175
++ ++L+++KE + LEI L + Q + ++++ LA+ +L + EV
Sbjct: 448 NAFQVSQNLLQEKESSLVEAKLEIQHLKSEQASLELLLQEKDEELAEARNKLGEVNQEVT 507
Query: 176 DMTSAVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQLQELYLSHFDLYVSKKFDLK 235
++ + +I M+ EKD + G K L ++ ++ V + +L
Sbjct: 508 ELKALMISREDQLMEATEMLKEKDVHLHRIE-GELGSSK----LKVTEAEMVVERIAELT 562
Query: 236 QNESKNYDNEVLSQAKNMERRLS-EALSEYIDSKAELCG-EQAKLELVANYNNPHSNQLS 293
+ N A + +S +++ + ++ + G E +L + ++ +
Sbjct: 563 NRLLMSTTNGQNQNAMRINNEISIDSMQQPLEKPHDDYGMENKRLVMELSFTRENLRMKE 622
Query: 294 MNILEAQTAVQLLEQEEGIINLQI---ENAIKEFVEDRTRIVEETALNAALA---IREEV 347
M +L Q A+ ++E ++ ++ E +K+ E+ E+ + ALA + E+
Sbjct: 623 MEVLAVQRALTFKDEEINVVMGRLEAKEQELKKLKEETINDSEDLKVLYALAQERVGEKT 682
Query: 348 SNDLA 352
DLA
Sbjct: 683 MGDLA 687
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 30.7 bits (66), Expect = 2.7
Identities = 49/234 (20%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 257 LSEALSEYIDSKAELCGEQAKLELVANYNNPHSNQLSMNILEAQTAVQLLEQEEGIINLQ 316
L EA+ + + + EL KL+ + + +++ L++ + +L+E+ EG++ L+
Sbjct: 1205 LLEAVRKILSERLELQSVIDKLQSDLSSKSNDMEEMTQRSLDSTSLRELVEKVEGLLELE 1264
Query: 317 IENAIKEFVEDRTRIVEETALNAALAIREEVSNDLAYLLDTTQHALVLDKVLYSALRHEL 376
I E + + + + I EE++N +L K L A +EL
Sbjct: 1265 -SGVIFESPSSQVEFLVSQLVQKFIEI-EELAN-------------LLRKQL-EAKGNEL 1308
Query: 377 HNIEEFLLFAAQLKQYVLDENDAVTSRICSMNEICREQASCEQKLEHSDVLLTSLCTVLG 436
IEE LL K + +++T S+ + E +LE S+ L S L
Sbjct: 1309 MEIEESLL---HHKTKIAGLRESLTQAEESLVAVRSELQDKSNELEQSEQRLLSTREKLS 1365
Query: 437 IEPTTNVMILVKSYNDLERDIKEAKEGIE---DGFRVREEKLREIEQSMRPLVD 487
I T ++V+ N +++ + EA ++ + ++ +L E+E+ ++ ++
Sbjct: 1366 IAVTKGKGLIVQRDN-VKQSLAEASAKLQKCSEELNSKDARLVEVEKKLKTYIE 1418
>At2g43840.1 68415.m05449 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 449
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 423 HSDVLLTSLCTVLGIEPTTNVMIL---VKSYNDLERDIKEAKE 462
H + LL+ +C VL I PT M L +KS ND + ++ + KE
Sbjct: 208 HEEELLSKVCPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKE 250
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 30.3 bits (65), Expect = 3.5
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 100 DVDALAEMKQDIE---MQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQI 156
D AL E+++D + +EK N++A E++V E NE E+ K+ A + ++
Sbjct: 431 DALALVEVERDNAGKALDEEKRNMVALKEKVVA-----LEKTNEATGKELEKIKAERGRL 485
Query: 157 CDEEKSLAQECIRLADEVEDMTSAVIEV 184
E+K L L +E + ++E+
Sbjct: 486 IKEKKELENRSESLRNEKAILQKDIVEL 513
>At3g54280.1 68416.m05999 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|O14981
TBP-associated factor 172 (TAF-172) (TAF(II)170) {Homo
sapiens}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 2049
Score = 30.3 bits (65), Expect = 3.5
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 209 PFDQYKQLQELYLSHFDLYVSKKFDLKQNESKNYDNEVLSQAKNMERRLSEALSEYIDSK 268
PF ++ + L +++D+ + SKN + V Q KN+ RRL + E
Sbjct: 119 PFRSFEMNKVLEFGALLASGGQEYDILNDNSKNPRDRVARQKKNLRRRLGLDMCEQFMDV 178
Query: 269 AELCGEQAKLELVANY-NNPHSNQLSMN 295
E+ ++ +E +N N N+L N
Sbjct: 179 NEMIRDEDLIEQKSNVPANGVGNRLYAN 206
>At5g48520.1 68418.m05999 expressed protein similar to unknown
protein (gb|AAB97010.1)
Length = 671
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 27 SFEWMLNNSEFASALEWMYYHLDYNNVLSETEKRRFEEIQK 67
SFEW + L+W+ L +NVLS E +E+ Q+
Sbjct: 25 SFEWPFQYDDARPILDWICSSLRPSNVLSLAELSLYEQFQR 65
>At5g25180.1 68418.m02985 cytochrome P450 71B14, putative (CYP71B14)
Identical to cytochrome P450 71B14 (SP:P58051)
[Arabidopsis thaliana]; cytochrome P450 71B1, Thlaspi
arvense, SWISSPROT:C7B1_THLAR; similar to cytochrome
P450 CYP83D1p (GIi:2739002) [Glycine max]
Length = 496
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 130 DLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQECIRLADEVEDMTSAVIEVVG 186
D IKQ + + +N++ + + IC ++ E +LA+ E++ +EVVG
Sbjct: 154 DFIKQHASLEKTVNMKQKLVKLSGSVICKVGFGISLEWSKLANTYEEVIQGTMEVVG 210
>At5g05180.1 68418.m00551 expressed protein
Length = 432
Score = 29.9 bits (64), Expect = 4.6
Identities = 32/181 (17%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 100 DVDALAEMKQDIEMQKEKFNLLAKHERI---VKDLIKQKEGINEQLNLEITKLNAAQQQI 156
D+ E K+ +E+Q++ +L + + + L+ + E + L++ ++++ ++ +
Sbjct: 160 DIAIETERKRVLEVQRQVVDLETELSDLSFKFEHLVNEHEVSRDCLDVSFSEISKLREML 219
Query: 157 CDEEKSLAQECIRLADEVEDMTSAVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQL 216
CD +++ + E +L D+++ + +E+ +++ T + T G + + L
Sbjct: 220 CDCQQNFSIEKTKLVDQIKHSEAEKMEMQRKEVELQAEISALKT--DLATRG--EHIEAL 275
Query: 217 QELYLSH---FDLYVSKKFDLKQNESKNYDNEVLSQAKNMERRLSEALSEYIDSKAELCG 273
+ + H +D+ +++K D E N E+ S+ ++ ++ E L++ + + EL
Sbjct: 276 NKDFDKHKLRYDMLMAEK-DGVCAEVDNLKAEMRSRDIQIQ-QMEEQLNQLVYKQTELVS 333
Query: 274 E 274
E
Sbjct: 334 E 334
>At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical to
G-box binding factor 1 SP:P42774 from [Arabidopsis
thaliana]; contains Pfam profile: PF00170 bZIP
transcription factor
Length = 313
Score = 29.9 bits (64), Expect = 4.6
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 107 MKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQE 166
+K + E++++K + L KQ E EQL + L+ Q + DE + L+ E
Sbjct: 215 VKDERELKRQKRKQSNRESARRSRLRKQAEC--EQLQQRVESLSNENQSLRDELQRLSSE 272
Query: 167 CIRLADEVEDMTSAVIEVVG 186
C +L E + + V+G
Sbjct: 273 CDKLKSENNSIQDELQRVLG 292
>At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical to
G-box binding factor 1 SP:P42774 from [Arabidopsis
thaliana]; contains Pfam profile: PF00170 bZIP
transcription factor
Length = 315
Score = 29.9 bits (64), Expect = 4.6
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 107 MKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQE 166
+K + E++++K + L KQ E EQL + L+ Q + DE + L+ E
Sbjct: 217 VKDERELKRQKRKQSNRESARRSRLRKQAEC--EQLQQRVESLSNENQSLRDELQRLSSE 274
Query: 167 CIRLADEVEDMTSAVIEVVG 186
C +L E + + V+G
Sbjct: 275 CDKLKSENNSIQDELQRVLG 294
>At4g11100.1 68417.m01802 expressed protein
Length = 287
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 446 LVKSYNDLERDIKEAKEGIEDGFRVREEKLREIEQSMRPLVDYIWDGCTKQPSSTDKTVA 505
L+K Y L+ IK A+E E E K +E+E S + L++ ++ + KT
Sbjct: 23 LLKDYESLQERIKHAEEAYEAIKLHHENKAKELEVSNKRLLEECMKE-RREKAKVRKTFE 81
Query: 506 ALAHQLEHEMSKTDTRILAANSDNQLRK 533
+ +E E + + + N + L K
Sbjct: 82 EMKKTMESERTAIVDELKSKNQELLLGK 109
>At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 29.9 bits (64), Expect = 4.6
Identities = 12/54 (22%), Positives = 29/54 (53%)
Query: 128 VKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQECIRLADEVEDMTSAV 181
+K+ I+++ + E+T + + D+ K +AQ+ +++ +E+E M V
Sbjct: 137 IKERIEEEREKARAMVKEVTAMLEKASTMADDAKGVAQKVVKMVEEIETMVEKV 190
>At3g01230.1 68416.m00029 expressed protein
Length = 126
Score = 29.9 bits (64), Expect = 4.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 453 LERDIKEAKEGIEDGFRVREEKLREIEQSM 482
LE+D+ EAK+ IE+ R +E +R +E +
Sbjct: 33 LEKDLHEAKDLIEEDLREKETSIRNLESEV 62
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 29.9 bits (64), Expect = 4.6
Identities = 64/303 (21%), Positives = 130/303 (42%), Gaps = 28/303 (9%)
Query: 51 NNVLSETEKRRFEEIQKRNVHKDNVLSQNEVDESISLIQSQYPGICLPGDVDALAEMKQD 110
N LS E+ +I + + K +L+ +E+ +L+ S+ + G+ + ++++K +
Sbjct: 181 NKALSHAEEAT--KIAEIHAEKAEILA-SELGRLKALLGSKEEKEAIEGN-EIVSKLKSE 236
Query: 111 IEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQECIRL 170
IE+ + + ++ I++ +K++EG+ EQL +++ A+ + + L
Sbjct: 237 IELLRGELEKVS----ILESSLKEQEGLVEQLKVDLEAAKMAESCTNSSVEEWKNKVHEL 292
Query: 171 ADEVEDMTSAVIEVVGNTMDVYGNCGEKDTAPNYFTFGPFDQYKQLQELYLSHFDLYVSK 230
EVE+ + + V E + + D Q +++ L + K
Sbjct: 293 EKEVEESNRSKSSASESMESVMKQLAELN---HVLHETKSDNAAQKEKIEL------LEK 343
Query: 231 KFDLKQNESKNYDNEVLSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPHSN 290
+ ++ + + Y +V AK +L E L E I S+ E+ E+ K + N SN
Sbjct: 344 TIEAQRTDLEEYGRQVCI-AKEEASKL-ENLVESIKSELEISQEE-KTRALDNEKAATSN 400
Query: 291 QLSMNILEAQTAVQL-LEQ---EEGIINLQIENAIKEFVEDRTRIVEETALNAALAIREE 346
N+L+ +T + + LE+ EE +E+ E T E A L +EE
Sbjct: 401 --IQNLLDQRTELSIELERCKVEEEKSKKDMESLTLALQEASTESSEAKA--TLLVCQEE 456
Query: 347 VSN 349
+ N
Sbjct: 457 LKN 459
>At1g59540.1 68414.m06694 kinesin motor protein-related similar to
kinesin motor protein (kin2) GI:2062751 from (Ustilago
maydis)
Length = 823
Score = 29.9 bits (64), Expect = 4.6
Identities = 32/216 (14%), Positives = 95/216 (43%), Gaps = 6/216 (2%)
Query: 266 DSKAELCGEQAKLELVANYNNPHSNQLSMNILEAQTAVQLLEQ--EEGIINLQIENAIKE 323
++ +E+ +++++L+ N N+ + + +L + +Q + + +E + +I N + E
Sbjct: 528 ENHSEVEDLKSRIQLLTNENDSLQVKFNEQVLLSNNLMQEMSELKQETLTVKEIPNRLSE 587
Query: 324 FVEDRTRIVEETALNAALAIREEVSNDLAYLLDTTQHALVLDKVLYSALRHELHNIEEFL 383
V + + ++ + I ++ S LL TT+ + L + L + I +
Sbjct: 588 SVANCKDVYKDVIVTMKSLITDKESPTANLLLGTTE----ITTSLLATLETQFSMIMDGQ 643
Query: 384 LFAAQLKQYVLDENDAVTSRICSMNEICREQASCEQKLEHSDVLLTSLCTVLGIEPTTNV 443
+ + + D + + + + + A + + +S + + + +
Sbjct: 644 KTGSSIDHPLSDHWETLRVNLKNTTTLLLSDAQAKDEFLNSHNKGQETAALEEKKLKSEL 703
Query: 444 MILVKSYNDLERDIKEAKEGIEDGFRVREEKLREIE 479
+I+ + YN+LE+++ K+ +E E+ ++E++
Sbjct: 704 IIIKERYNELEKELCLDKQLLEASRESHEKLIKEVQ 739
>At5g05180.2 68418.m00552 expressed protein
Length = 408
Score = 29.5 bits (63), Expect = 6.1
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Query: 52 NVLSETEKRRFEEIQKRNVHKDNVLSQNEVD-ESISLIQSQYPGICLPGDVDALAEMK-Q 109
++ ETE++R E+Q++ V + LS E + Q I VD + + +
Sbjct: 160 DIAIETERKRVLEVQRQVVDLETELSDLSFKFEHLVNEHEQNFSIEKTKLVDQIKHSEAE 219
Query: 110 DIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSLAQECIR 169
+EMQ+++ L A+ + DL + E I E LN + K + E+ + E
Sbjct: 220 KMEMQRKEVELQAEISALKTDLATRGEHI-EALNKDFDKHKLRYDMLMAEKDGVCAEVDN 278
Query: 170 LADEV 174
L E+
Sbjct: 279 LKAEM 283
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 104 LAEMKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEKSL 163
+ +MK+D+E E L ER+ +L + KE + +QL E + +++ + EK
Sbjct: 276 MLQMKKDMEKSFENQQLRQMMERVETELRETKERLEQQLKEEKSARLELEKRAKEVEKRS 335
Query: 164 AQECIRLADE 173
+ L DE
Sbjct: 336 SDVVKELNDE 345
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 29.5 bits (63), Expect = 6.1
Identities = 33/164 (20%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 228 VSKKFDLKQNESKNYDNEVLSQAKNMERRLSEALSEYIDS-----KAELCGEQAKLELVA 282
+ + ++KQ + + + K+ E+ L + L + DS K + EL A
Sbjct: 186 IKEVVEIKQRNLAEENQKTMELLKDREQALQDQLRQAKDSVSTMQKLHELAQNQLFELRA 245
Query: 283 NYNNPHSNQLS-----MNILE-AQTAVQLLEQEEGIINLQIENAIKEFVEDRT-RIVEET 335
+ + + S M+ +E AQT + LE+E+G + Q++ A ++ ++ I +
Sbjct: 246 QSDEETAGKQSEVSLLMDEVERAQTRLLTLEREKGHLRSQLQTANEDTDNKKSDNIDSNS 305
Query: 336 ALNAALAIREEVSNDLAYLLDTTQHALVLDKVLYSALRHELHNI 379
L +L +E++ ++L + + AL ++ + A +L+++
Sbjct: 306 MLENSLTAKEKIISELNMEIHNVETALANERESHVAEIKKLNSL 349
>At1g43190.1 68414.m04977 polypyrimidine tract-binding protein,
putative / heterogeneous nuclear ribonucleoprotein,
putative similar to Polypyrimidine tract-binding protein
1 (PTB) (Heterogeneous nuclear ribonucleoprotein I)
(hnRNP I) from {Rattus norvegicus} SP|Q00438, {Homo
sapiens} SP|P26599, [Homo sapiens] GI:35770; contains
InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 432
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 92 YPGICLPGDVDALAEMKQDIEMQKEKFNLLAKHERIVKDLIKQKEGINEQLNLEITKLNA 151
Y C P + L+ + QD+ ++E N + +H +V + + G + L + A
Sbjct: 347 YRYCCSPTKMIHLSTLPQDVT-EEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEEA 405
Query: 152 AQQQICDEEKSLAQECIRLA 171
A+ +C SL IR++
Sbjct: 406 AEALVCKHATSLGGSIIRIS 425
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 6.1
Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 26/279 (9%)
Query: 230 KKFDLKQNESKNYDNEV-LSQAKNMERRLSEALSEYIDSKAELCGEQAKLELVANYNNPH 288
K +L ++ + E+ L ++ M+ +L ++L+E D EL E+ EL +
Sbjct: 349 KTTELANRLTELQEKEIALESSEVMKGQLEQSLTEKTD---EL--EKCYAELNDRSVSLE 403
Query: 289 SNQLSMNILEAQTAVQLLEQEEGIINLQ-IENAIKEFVEDRTRIVEETALNAA----LAI 343
+ +L+ LE A + E EE + LQ + A+ + D+ + + A+ A+ L++
Sbjct: 404 AYELTKKELEQSLAEKTKELEECLTKLQEMSTALDQSELDKGELAKSDAMVASYQEMLSV 463
Query: 344 REEVSNDLAYLLDTTQ-----HAL-VLDKVLYSAL-RHELHNI-EEFLLFAAQLKQYVLD 395
R + ++ +L H+ +++KV A R EL N+ +E+ + L
Sbjct: 464 RNSIIENIETILSNIYTPEEGHSFDIVEKVRSLAEERKELTNVSQEYNRLKDLIVSIDLP 523
Query: 396 EN---DAVTSRICSMNEICREQASCEQKLEHSDVLLTSLCTVLGIEPTTNVMILVKSYND 452
E ++ SR+ + E Q E + + S+ +E +N+ K +D
Sbjct: 524 EEMSQSSLESRLAWLRESFL-QGKDEVNALQNRIESVSMSLSAEMEEKSNIR---KELDD 579
Query: 453 LERDIKEAKEGIEDGFRVREEKLREIEQSMRPLVDYIWD 491
L +K+ +E E G REE +R + ++ + + + D
Sbjct: 580 LSFSLKKMEETAERGSLEREEIVRRLVETSGLMTEGVED 618
>At5g65800.1 68418.m08279 1-aminocyclopropane-1-carboxylate
synthase, putative / ACC synthase, putative similar to
ACC synthases from Arabidopsis thaliana [GI:940370],
Lycopersicon esculentum [GI:508609], Cucumis sativus
[GI:3641649]
Length = 470
Score = 29.1 bits (62), Expect = 8.1
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 47 HLDYNNVLSETEKRRFEEIQKRNVHKDNVLSQNEVDESISLIQSQYPGICLPG-DVDAL- 104
HL + + S T + I +V KD L EV + + ++ S + LPG V A+
Sbjct: 226 HLISDEIYSGTMFGFEQFISVMDVLKDKKLEDTEVSKRVHVVYSLSKDLGLPGFRVGAIY 285
Query: 105 --AEMKQDIEMQKEKFNLLAKH-ERIVKDLIKQKEGINEQLNLEITKLNAAQQQICDEEK 161
EM + F L++ + ++ L+ K+ ++ L +L + Q+++ +
Sbjct: 286 SNDEMIVSAATKMSSFGLVSSQTQYLLSALLSDKKFTSQYLEENQKRLKSRQRRLVSGLE 345
Query: 162 SLAQECIR 169
S C+R
Sbjct: 346 SAGITCLR 353
>At5g51330.1 68418.m06364 meiosis protein-related (DYAD) (SWI1)
annotation temporarily based on supporting cDNA
gi|18483289|gb|AF466153.1|; supporting cDNA are SWITCH1
splice variant S and SWITCH1 splice variant L (SWI1)
GI:16033413 and GI:16033410
Length = 639
Score = 29.1 bits (62), Expect = 8.1
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 412 REQASCEQKLEHSDVLLTSLCTVLGIEPTTNVMILVKSYNDLERDIKEAKEGIEDGFRVR 471
RE K E ++++ + N+M K ++ D+ + K IED +
Sbjct: 428 RELKKLASKKEEEELVIMTTPNSCVTSQNDNLMTPAK---EIYADLLKKKYKIEDQLVII 484
Query: 472 EEKLREIEQSMRPLVDYIWDGCTKQPSSTD 501
E LR++E+ M L + + K+P ST+
Sbjct: 485 GETLRKMEEDMGWLKKTVDENYPKKPDSTE 514
>At5g28730.1 68418.m03529 hypothetical protein
Length = 296
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 12/65 (18%)
Query: 405 CSMNEICREQASCEQKLEHSDVLLTSLCTVL----GIEPTTN--------VMILVKSYND 452
C ++I + SC+ + S T LC +L G++ +TN + +++ + ND
Sbjct: 12 CIAHQIYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASND 71
Query: 453 LERDI 457
+RDI
Sbjct: 72 TQRDI 76
>At1g78240.1 68414.m09118 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 684
Score = 29.1 bits (62), Expect = 8.1
Identities = 37/173 (21%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 61 RFEEIQKRNVHKDNVLSQNEVDESISLIQS---QYPGICLPGDVDALAEMKQD-IEMQKE 116
R++E++ N+ +N + V E+++L S + C PG KQ+ +E+
Sbjct: 142 RWKELEYCNIESENFVPCFNVSENLALGYSNGDENDRFCGPGS-------KQECLELPPV 194
Query: 117 KFNLLAKHERIVKDLIKQKE-GINEQLNLEITKLNAAQQQICDEEKSLAQECIRLADEVE 175
K+ + + KD+I I Q + + + D++ S + ++DEVE
Sbjct: 195 KYRVPLRWPT-GKDIIWHSNVKITAQEVVSSGSITKRMMMMEDDQISF-RSASPMSDEVE 252
Query: 176 DMTSAVIEVVGNTMDVYGNCGEK---DTAPNYFTFGPFDQYKQLQELYLSHFD 225
D + + E++G D + G + D Y +FG KQ+ + +++++
Sbjct: 253 DYSHQIAEMIGIKKDNFIEAGVRTILDIGCGYGSFGAHLLSKQILTMCIANYE 305
>At1g25350.1 68414.m03145 glutamine-tRNA ligase, putative /
glutaminyl-tRNA synthetase, putative / GlnRS, putative
similar to tRNA-glutamine synthetase GI:2995454 from
[Lupinus luteus]
Length = 795
Score = 29.1 bits (62), Expect = 8.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 16 LRTLGVDTRNQSFEWMLNNSEFASALEWMYYHLDYNNVLSETEKRRF 62
L TL +TR S+ W+L++ W Y L+ N + K +
Sbjct: 467 LCTLEFETRRASYYWLLHSLSLYMPYVWEYSRLNVTNTVMSKRKLNY 513
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.130 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,470,689
Number of Sequences: 28952
Number of extensions: 526365
Number of successful extensions: 1880
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1822
Number of HSP's gapped (non-prelim): 95
length of query: 558
length of database: 12,070,560
effective HSP length: 85
effective length of query: 473
effective length of database: 9,609,640
effective search space: 4545359720
effective search space used: 4545359720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 62 (29.1 bits)
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