GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001850-TA|BGIBMGA001850-PA|IPR000326|Phosphoesterase,
PA-phosphatase related, IPR008934|Acid phosphatase/vanadium-dependent
haloperoxidase
         (240 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28738-6|AAT92056.1|  274|Caenorhabditis elegans Hypothetical pr...   103   2e-22
U28738-7|AAA68312.1|  341|Caenorhabditis elegans Hypothetical pr...   101   5e-22
U28738-5|AAT92055.1|  342|Caenorhabditis elegans Hypothetical pr...   101   5e-22
AF098992-15|AAN39673.1|  340|Caenorhabditis elegans Hypothetical...   101   6e-22
AF098992-14|AAD34669.1|  346|Caenorhabditis elegans Hypothetical...   101   6e-22
AF098992-13|AAN39672.1|  385|Caenorhabditis elegans Hypothetical...   101   6e-22
Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical pr...    62   3e-10
Z49130-4|CAA88966.1|  396|Caenorhabditis elegans Hypothetical pr...    36   0.034
AF014939-9|AAB63931.2|  246|Caenorhabditis elegans Hypothetical ...    30   1.7  
AL117207-21|CAB60405.3|  384|Caenorhabditis elegans Hypothetical...    27   9.1  

>U28738-6|AAT92056.1|  274|Caenorhabditis elegans Hypothetical
           protein T28D9.3c protein.
          Length = 274

 Score =  103 bits (246), Expect = 2e-22
 Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 14/220 (6%)

Query: 23  GFFCNDAAISFDYTGETVTSLILMTTIFIIPIGVFMITEY---------IFTPNEIPLSD 73
           GFFC+D +I ++Y  +T+T++ LM    ++     +  EY         I  P     ++
Sbjct: 55  GFFCDDDSIRYEYRKDTITAVQLMLYNLVLNAATVLFVEYYRMQKVESNINNPRYRWRNN 114

Query: 74  RTMRAFLKSSWLFKTYLYGFMMNLCIVEVMKGIVGNPRPVFFALCQ--PDTAKTCNGTDF 131
                F++    F     GF+MN+ +  V K +VG  RP F  +C+   DT  T +   +
Sbjct: 115 HLHVLFVRLLTYFGYSQIGFVMNIALNIVTKHVVGRLRPHFLDVCKLANDTCVTGDSHRY 174

Query: 132 VSTFECTSSYSRWYRMDSYRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSELVVPXXX 191
           ++ + CT        +++ +SF SGH+++S+YC  + A Y+Q R       + +VVP   
Sbjct: 175 ITDYTCTGPPE--LVLEARKSFYSGHSAVSLYCATWSALYIQAR-LGPVLNNRIVVPISQ 231

Query: 192 XXXXXXXXXXXXTRITDRMHHWWDVLIGSAIGLITLLYTV 231
                       +RITD  HHW DVL+G  IG+   +YTV
Sbjct: 232 TLMFMIGLGISFSRITDNKHHWSDVLVGIFIGIFLAVYTV 271


>U28738-7|AAA68312.1|  341|Caenorhabditis elegans Hypothetical
           protein T28D9.3a protein.
          Length = 341

 Score =  101 bits (242), Expect = 5e-22
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 14/219 (6%)

Query: 23  GFFCNDAAISFDYTGETVTSLILMTTIFIIPIGVFMITEY---------IFTPNEIPLSD 73
           GFFC+D +I ++Y  +T+T++ LM    ++     +  EY         I  P     ++
Sbjct: 54  GFFCDDDSIRYEYRKDTITAVQLMLYNLVLNAATVLFVEYYRMQKVESNINNPRYRWRNN 113

Query: 74  RTMRAFLKSSWLFKTYLYGFMMNLCIVEVMKGIVGNPRPVFFALCQ--PDTAKTCNGTDF 131
                F++    F     GF+MN+ +  V K +VG  RP F  +C+   DT  T +   +
Sbjct: 114 HLHVLFVRLLTYFGYSQIGFVMNIALNIVTKHVVGRLRPHFLDVCKLANDTCVTGDSHRY 173

Query: 132 VSTFECTSSYSRWYRMDSYRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSELVVPXXX 191
           ++ + CT        +++ +SF SGH+++S+YC  + A Y+Q R       + +VVP   
Sbjct: 174 ITDYTCTGPPE--LVLEARKSFYSGHSAVSLYCATWSALYIQAR-LGPVLNNRIVVPISQ 230

Query: 192 XXXXXXXXXXXXTRITDRMHHWWDVLIGSAIGLITLLYT 230
                       +RITD  HHW DVL+G  IG+   +YT
Sbjct: 231 TLMFMIGLGISFSRITDNKHHWSDVLVGIFIGIFLAVYT 269


>U28738-5|AAT92055.1|  342|Caenorhabditis elegans Hypothetical
           protein T28D9.3b protein.
          Length = 342

 Score =  101 bits (242), Expect = 5e-22
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 14/219 (6%)

Query: 23  GFFCNDAAISFDYTGETVTSLILMTTIFIIPIGVFMITEY---------IFTPNEIPLSD 73
           GFFC+D +I ++Y  +T+T++ LM    ++     +  EY         I  P     ++
Sbjct: 55  GFFCDDDSIRYEYRKDTITAVQLMLYNLVLNAATVLFVEYYRMQKVESNINNPRYRWRNN 114

Query: 74  RTMRAFLKSSWLFKTYLYGFMMNLCIVEVMKGIVGNPRPVFFALCQ--PDTAKTCNGTDF 131
                F++    F     GF+MN+ +  V K +VG  RP F  +C+   DT  T +   +
Sbjct: 115 HLHVLFVRLLTYFGYSQIGFVMNIALNIVTKHVVGRLRPHFLDVCKLANDTCVTGDSHRY 174

Query: 132 VSTFECTSSYSRWYRMDSYRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSELVVPXXX 191
           ++ + CT        +++ +SF SGH+++S+YC  + A Y+Q R       + +VVP   
Sbjct: 175 ITDYTCTGPPE--LVLEARKSFYSGHSAVSLYCATWSALYIQAR-LGPVLNNRIVVPISQ 231

Query: 192 XXXXXXXXXXXXTRITDRMHHWWDVLIGSAIGLITLLYT 230
                       +RITD  HHW DVL+G  IG+   +YT
Sbjct: 232 TLMFMIGLGISFSRITDNKHHWSDVLVGIFIGIFLAVYT 270


>AF098992-15|AAN39673.1|  340|Caenorhabditis elegans Hypothetical
           protein F53C3.13c protein.
          Length = 340

 Score =  101 bits (241), Expect = 6e-22
 Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 19/236 (8%)

Query: 18  PNRKAGFFCNDAAISFDYTGETVTSLILMTTIFIIPIGVFMITEYIFT-------PNEIP 70
           P  + GF+C+D +I + +    VT  +L+    +IPI + + TE   T         E  
Sbjct: 34  PPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPILLILATELFRTLAWEKKCETEFK 93

Query: 71  ---LSDRTMRAFLKSSWLFKTYLY-GFMMNLCIVEVMKGIVGNPRPVFFALCQPDTA-KT 125
              + + ++   +   + F  Y + G   N  +V++ K  +G  RP F  +C+PD   +T
Sbjct: 94  TYHVRNHSVHRLVVRLYCFIGYFFVGVCFNQLMVDIAKYTIGRQRPHFMDVCRPDIGYQT 153

Query: 126 CNGTD-FVSTFECTSSYSRWYRMDSYRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSE 184
           C+  D +++ F+CT++ ++    ++  SF SGH++ S Y  +F + YLQ R F   + S 
Sbjct: 154 CSQPDLYITDFKCTTTDTKKIH-EAQLSFYSGHSAFSFYAAWFTSLYLQARLFRPLF-SR 211

Query: 185 LVVPXXXXXXXXXXXXXXXTRITDRMHHWWDVLI----GSAIGLITLLYTVKELLR 236
           L++P               TR++D  HHW DVL+    GSAIG+   L+  +   R
Sbjct: 212 LLLPVIQFLLFGGAAYVSLTRVSDYKHHWSDVLVGAIMGSAIGVFVALFVAEVFKR 267


>AF098992-14|AAD34669.1|  346|Caenorhabditis elegans Hypothetical
           protein F53C3.13a protein.
          Length = 346

 Score =  101 bits (241), Expect = 6e-22
 Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 19/236 (8%)

Query: 18  PNRKAGFFCNDAAISFDYTGETVTSLILMTTIFIIPIGVFMITEYIFT-------PNEIP 70
           P  + GF+C+D +I + +    VT  +L+    +IPI + + TE   T         E  
Sbjct: 34  PPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPILLILATELFRTLAWEKKCETEFK 93

Query: 71  ---LSDRTMRAFLKSSWLFKTYLY-GFMMNLCIVEVMKGIVGNPRPVFFALCQPDTA-KT 125
              + + ++   +   + F  Y + G   N  +V++ K  +G  RP F  +C+PD   +T
Sbjct: 94  TYHVRNHSVHRLVVRLYCFIGYFFVGVCFNQLMVDIAKYTIGRQRPHFMDVCRPDIGYQT 153

Query: 126 CNGTD-FVSTFECTSSYSRWYRMDSYRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSE 184
           C+  D +++ F+CT++ ++    ++  SF SGH++ S Y  +F + YLQ R F   + S 
Sbjct: 154 CSQPDLYITDFKCTTTDTKKIH-EAQLSFYSGHSAFSFYAAWFTSLYLQARLFRPLF-SR 211

Query: 185 LVVPXXXXXXXXXXXXXXXTRITDRMHHWWDVLI----GSAIGLITLLYTVKELLR 236
           L++P               TR++D  HHW DVL+    GSAIG+   L+  +   R
Sbjct: 212 LLLPVIQFLLFGGAAYVSLTRVSDYKHHWSDVLVGAIMGSAIGVFVALFVAEVFKR 267


>AF098992-13|AAN39672.1|  385|Caenorhabditis elegans Hypothetical
           protein F53C3.13b protein.
          Length = 385

 Score =  101 bits (241), Expect = 6e-22
 Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 19/236 (8%)

Query: 18  PNRKAGFFCNDAAISFDYTGETVTSLILMTTIFIIPIGVFMITEYIFT-------PNEIP 70
           P  + GF+C+D +I + +    VT  +L+    +IPI + + TE   T         E  
Sbjct: 34  PPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPILLILATELFRTLAWEKKCETEFK 93

Query: 71  ---LSDRTMRAFLKSSWLFKTYLY-GFMMNLCIVEVMKGIVGNPRPVFFALCQPDTA-KT 125
              + + ++   +   + F  Y + G   N  +V++ K  +G  RP F  +C+PD   +T
Sbjct: 94  TYHVRNHSVHRLVVRLYCFIGYFFVGVCFNQLMVDIAKYTIGRQRPHFMDVCRPDIGYQT 153

Query: 126 CNGTD-FVSTFECTSSYSRWYRMDSYRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSE 184
           C+  D +++ F+CT++ ++    ++  SF SGH++ S Y  +F + YLQ R F   + S 
Sbjct: 154 CSQPDLYITDFKCTTTDTKKIH-EAQLSFYSGHSAFSFYAAWFTSLYLQARLFRPLF-SR 211

Query: 185 LVVPXXXXXXXXXXXXXXXTRITDRMHHWWDVLI----GSAIGLITLLYTVKELLR 236
           L++P               TR++D  HHW DVL+    GSAIG+   L+  +   R
Sbjct: 212 LLLPVIQFLLFGGAAYVSLTRVSDYKHHWSDVLVGAIMGSAIGVFVALFVAEVFKR 267


>Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical
           protein F13E6.5 protein.
          Length = 304

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 7/208 (3%)

Query: 26  CNDAAISFDYTGETVTSLILMTTIFIIPIGVFMITEYIFTPNEIPLSDRTMRAFLKSSWL 85
           C D +I   +   TV    L+      P  +  + E I        S+R  + F  ++  
Sbjct: 70  CGDISIQQPFKENTVGLKHLLVITLGSPFLIVALVEAILHFKSKG-SNRLAKFFSATTIT 128

Query: 86  FKTYLYGFMMNLCIVEVMKGIVGNPRPVFFALCQPDTAKT-C-NGTDFV--STFECTSSY 141
           +  YL  +      +E +K  VG  RP FF++C+PD +K  C +   F+  S   CT+  
Sbjct: 129 YLKYLLMYAACTFAMEFLKCYVGRLRPHFFSVCKPDWSKVDCTDKQSFIDSSDLVCTNPN 188

Query: 142 SRWYRMDSYRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSELVVPXXXX-XXXXXXXX 200
            R  R  +  SFPSGHT+ + +   F+  YL++ A N   +  + +              
Sbjct: 189 PRKIR-TARTSFPSGHTAAAFHVFLFVYIYLRRMAENTGIKEIITIRNILVPSYALWTVF 247

Query: 201 XXXTRITDRMHHWWDVLIGSAIGLITLL 228
              TR+TD  H   DVL G  + ++ ++
Sbjct: 248 CAVTRVTDNWHFPTDVLGGVILAVVFII 275


>Z49130-4|CAA88966.1|  396|Caenorhabditis elegans Hypothetical
           protein T06D8.3 protein.
          Length = 396

 Score = 35.5 bits (78), Expect = 0.034
 Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 18/195 (9%)

Query: 44  ILMTTIFIIPIGVFMITEYIF-----TPNEIPLS---DRTMRAFLKSSWLFKT-YLYGFM 94
           +L T  F IP  V +I E +F      P +I  +   +  +  F +  + F   YL G +
Sbjct: 96  LLYTLAFTIPPLVILIGEVMFWLFSTKPRKIVYANCGECPVHLFTRRLFRFVIIYLAGLL 155

Query: 95  MNLCIVEVMKGIVGNPRPVFFALCQPD----TAKTCNGTDFVSTFECTSSYSRWYRMDSY 150
           +    V+ +K + G  RP F +LC       TA   +         C    +   R  ++
Sbjct: 156 IVQIFVDTIKLMTGYQRPYFLSLCNVSITACTAPLEHSPSPSPHLACNYRGADELRY-AW 214

Query: 151 RSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYR-SELVVPXXXXXXXXXXXXXXXTRITDR 209
            +FPS H  +S Y   F + Y+    +  + R + L+ P               +RI   
Sbjct: 215 LTFPSLHAVVSSYAACFASLYIY---YMINLRGAPLLRPLLIFGFMGLCIVDSFSRINGY 271

Query: 210 MHHWWDVLIGSAIGL 224
            +HW D+ +   IG+
Sbjct: 272 KNHWRDIWVAWVIGI 286


>AF014939-9|AAB63931.2|  246|Caenorhabditis elegans Hypothetical
           protein ZC132.9 protein.
          Length = 246

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 40  VTSLILMTTIFIIPIGVFMITEYIFTPNEIPLSD 73
           V ++ +    F++PI V M+TE +++PN IP+ +
Sbjct: 206 VGTIFVSIDCFLVPI-VIMLTEIMYSPNPIPVDE 238


>AL117207-21|CAB60405.3|  384|Caenorhabditis elegans Hypothetical
           protein Y60A3A.10 protein.
          Length = 384

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/13 (76%), Positives = 11/13 (84%)

Query: 111 RPVFFALCQPDTA 123
           RPV FALC PDT+
Sbjct: 287 RPVLFALCDPDTS 299


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.329    0.140    0.460 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,192,409
Number of Sequences: 27539
Number of extensions: 201836
Number of successful extensions: 588
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 559
Number of HSP's gapped (non-prelim): 13
length of query: 240
length of database: 12,573,161
effective HSP length: 79
effective length of query: 161
effective length of database: 10,397,580
effective search space: 1674010380
effective search space used: 1674010380
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 58 (27.5 bits)