Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001849-TA|BGIBMGA001849-PA|IPR001563|Peptidase S10,
serine carboxypeptidase, IPR006195|Aminoacyl-transfer RNA synthetase,
class II, IPR002320|Threonyl-tRNA synthetase, class IIa,
IPR004154|Anticodon-binding, IPR012676|TGS-like, IPR004095|TGS,
IPR012947|Threonyl/alanyl tRNA synthetase, SAD, IPR002314|tRNA
synthetase, class II (G, H, P and S)
(703 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical pr... 974 0.0
Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical pr... 974 0.0
U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna synt... 38 0.024
AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA sy... 38 0.024
Z82060-7|CAB04884.1| 454|Caenorhabditis elegans Hypothetical pr... 37 0.042
U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical pr... 31 2.8
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 30 6.4
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 30 6.4
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 30 6.4
>Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical
protein C47D12.6b protein.
Length = 684
Score = 974 bits (2411), Expect = 0.0
Identities = 438/683 (64%), Positives = 543/683 (79%), Gaps = 13/683 (1%)
Query: 11 TNAVSEMNPWPEYIQKRITLWDKYKAQYTEQIASKPDISVVVTLPDGKTVEAKAWKTTPY 70
+ A ++M PWP +I++RI LWDK KA+Y +IA+K + +TLPDGK E K W+TTP+
Sbjct: 2 SKAPTDMAPWPAFIEERIKLWDKLKAEYDAEIAAKESEPIQITLPDGKIHEGKTWRTTPF 61
Query: 71 DVAKGISQGLADATIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQAVFWHSSAHMLGE 130
++A+ IS+GLA+A +IA+VN +WDLDRP EG+ KLELL++D+ +A+ VFWHSSAH+LGE
Sbjct: 62 EIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKLELLKFDDDEAKQVFWHSSAHVLGE 121
Query: 131 AMERVYGGCLCYGPPIEEGFYYDMYYPEKGISSTDFNVLEGLIKKIAKEKQPFERLELTK 190
AMER GG LCYGPPI+EGFYYDM++ + I DF ++ ++K K+KQ FERLE+TK
Sbjct: 122 AMERYCGGHLCYGPPIQEGFYYDMWHENRTICPDDFPKIDQIVKAAVKDKQKFERLEMTK 181
Query: 191 EQLLEMFDYNPFKVRILNEKVQTPTTTVYRCGPLIDLCRGPHVRHTGKVKALKVTKNSAT 250
E LLEMF YN FKVRI+ EK+ TP TTVYRCGPLIDLCRGPHVRHTGKVKA+ +TKNS++
Sbjct: 182 EDLLEMFKYNEFKVRIITEKIHTPKTTVYRCGPLIDLCRGPHVRHTGKVKAMAITKNSSS 241
Query: 251 YWEGKAEAESLQRVYGISFPEPKQLKEWEVIQEEAAKRDHRKIGREQELFFFHELSPGSC 310
YWEGKA+AESLQR+YGISFP+ KQLKEW+ +QEEAAKRDHRK+G+E +LFFFH+LSPGS
Sbjct: 242 YWEGKADAESLQRLYGISFPDSKQLKEWQKLQEEAAKRDHRKLGKEHDLFFFHQLSPGSA 301
Query: 311 FFQPRGAHIYNTLVNFIKEQYRSRGFHEVVTPNMYNAKLWQTSGHWAHYAENMFSFDVEK 370
F+ P+GAHIYN LV+FI++QYR RGF EV+TPNMYN KLW+TSGHW HY+E+MF +VEK
Sbjct: 302 FWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYSEDMFKIEVEK 361
Query: 371 ETFALKPMNCPGHCLMFDNRTRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDA 430
E F LKPMNCPGHCLMF + ++ ELP R ADFGVLHRNE+SGALTGLTRVRRFQQDDA
Sbjct: 362 EEFGLKPMNCPGHCLMFGHMPHTYNELPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDA 421
Query: 431 HIFCAPQQIEAEIVGCLEFLKCVY-STFGFTFQLKLSTRPEKYLGDLETWNQAEKALEDS 489
HIFC QI EI CL+FL+ Y FGFTF+L LSTRPE +LG++ETW++AE L ++
Sbjct: 422 HIFCRQDQISEEIKQCLDFLEYAYEKVFGFTFKLNLSTRPEGFLGNIETWDKAEADLTNA 481
Query: 490 LNKFGKPWQLNPGDGAFYGPKIDITIQDALRRSHQCATIQLDFQLPERFNLTYSVVKFWC 549
LN G+ W LNPGDGAFYGPKIDITIQDAL+R+ QCATIQLDFQLP +F+L+Y
Sbjct: 482 LNASGRKWVLNPGDGAFYGPKIDITIQDALKRNFQCATIQLDFQLPNQFDLSY------- 534
Query: 550 CVSFGCSETGDKKRPVIIHRAVLGSVERMVAILSESYAGKWPLWLSPRQLRVVPVGPAFD 609
E G+K+RPV+IHRAVLGSVERM AIL+ESY GKWP WLSPRQ +++ V +
Sbjct: 535 -----FDEKGEKQRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITVHESVR 589
Query: 610 DYAVQVNDKLFAAGFMSEVDTDAGDTLNKKVRNAQLAQFNYILVVGEREKNSGTVNVRTR 669
DYA V ++F AGF E + + GDT+NK+VR AQLAQFN+ILV+G +EK +GTVNVRTR
Sbjct: 590 DYANDVKKQIFEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTR 649
Query: 670 DNKVHGEMSVEALIEHLNNLVRE 692
DN V GE++++ LI E
Sbjct: 650 DNAVRGEVALDKLISKFRRFADE 672
>Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical
protein C47D12.6a protein.
Length = 725
Score = 974 bits (2411), Expect = 0.0
Identities = 438/683 (64%), Positives = 543/683 (79%), Gaps = 13/683 (1%)
Query: 11 TNAVSEMNPWPEYIQKRITLWDKYKAQYTEQIASKPDISVVVTLPDGKTVEAKAWKTTPY 70
+ A ++M PWP +I++RI LWDK KA+Y +IA+K + +TLPDGK E K W+TTP+
Sbjct: 43 SKAPTDMAPWPAFIEERIKLWDKLKAEYDAEIAAKESEPIQITLPDGKIHEGKTWRTTPF 102
Query: 71 DVAKGISQGLADATIIARVNNELWDLDRPLEGDCKLELLRWDNTDAQAVFWHSSAHMLGE 130
++A+ IS+GLA+A +IA+VN +WDLDRP EG+ KLELL++D+ +A+ VFWHSSAH+LGE
Sbjct: 103 EIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKLELLKFDDDEAKQVFWHSSAHVLGE 162
Query: 131 AMERVYGGCLCYGPPIEEGFYYDMYYPEKGISSTDFNVLEGLIKKIAKEKQPFERLELTK 190
AMER GG LCYGPPI+EGFYYDM++ + I DF ++ ++K K+KQ FERLE+TK
Sbjct: 163 AMERYCGGHLCYGPPIQEGFYYDMWHENRTICPDDFPKIDQIVKAAVKDKQKFERLEMTK 222
Query: 191 EQLLEMFDYNPFKVRILNEKVQTPTTTVYRCGPLIDLCRGPHVRHTGKVKALKVTKNSAT 250
E LLEMF YN FKVRI+ EK+ TP TTVYRCGPLIDLCRGPHVRHTGKVKA+ +TKNS++
Sbjct: 223 EDLLEMFKYNEFKVRIITEKIHTPKTTVYRCGPLIDLCRGPHVRHTGKVKAMAITKNSSS 282
Query: 251 YWEGKAEAESLQRVYGISFPEPKQLKEWEVIQEEAAKRDHRKIGREQELFFFHELSPGSC 310
YWEGKA+AESLQR+YGISFP+ KQLKEW+ +QEEAAKRDHRK+G+E +LFFFH+LSPGS
Sbjct: 283 YWEGKADAESLQRLYGISFPDSKQLKEWQKLQEEAAKRDHRKLGKEHDLFFFHQLSPGSA 342
Query: 311 FFQPRGAHIYNTLVNFIKEQYRSRGFHEVVTPNMYNAKLWQTSGHWAHYAENMFSFDVEK 370
F+ P+GAHIYN LV+FI++QYR RGF EV+TPNMYN KLW+TSGHW HY+E+MF +VEK
Sbjct: 343 FWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYSEDMFKIEVEK 402
Query: 371 ETFALKPMNCPGHCLMFDNRTRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDA 430
E F LKPMNCPGHCLMF + ++ ELP R ADFGVLHRNE+SGALTGLTRVRRFQQDDA
Sbjct: 403 EEFGLKPMNCPGHCLMFGHMPHTYNELPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDA 462
Query: 431 HIFCAPQQIEAEIVGCLEFLKCVY-STFGFTFQLKLSTRPEKYLGDLETWNQAEKALEDS 489
HIFC QI EI CL+FL+ Y FGFTF+L LSTRPE +LG++ETW++AE L ++
Sbjct: 463 HIFCRQDQISEEIKQCLDFLEYAYEKVFGFTFKLNLSTRPEGFLGNIETWDKAEADLTNA 522
Query: 490 LNKFGKPWQLNPGDGAFYGPKIDITIQDALRRSHQCATIQLDFQLPERFNLTYSVVKFWC 549
LN G+ W LNPGDGAFYGPKIDITIQDAL+R+ QCATIQLDFQLP +F+L+Y
Sbjct: 523 LNASGRKWVLNPGDGAFYGPKIDITIQDALKRNFQCATIQLDFQLPNQFDLSY------- 575
Query: 550 CVSFGCSETGDKKRPVIIHRAVLGSVERMVAILSESYAGKWPLWLSPRQLRVVPVGPAFD 609
E G+K+RPV+IHRAVLGSVERM AIL+ESY GKWP WLSPRQ +++ V +
Sbjct: 576 -----FDEKGEKQRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITVHESVR 630
Query: 610 DYAVQVNDKLFAAGFMSEVDTDAGDTLNKKVRNAQLAQFNYILVVGEREKNSGTVNVRTR 669
DYA V ++F AGF E + + GDT+NK+VR AQLAQFN+ILV+G +EK +GTVNVRTR
Sbjct: 631 DYANDVKKQIFEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTR 690
Query: 670 DNKVHGEMSVEALIEHLNNLVRE 692
DN V GE++++ LI E
Sbjct: 691 DNAVRGEVALDKLISKFRRFADE 713
>U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna
synthetase protein 1 protein.
Length = 441
Score = 37.9 bits (84), Expect = 0.024
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Query: 317 AHIYNTLVNFIKEQYRSRGFHEVVTPNMYNAKLWQTSGHWAHYAENM-FSFDVEKETFAL 375
A + L+++ E+ + GF + P++ + ++ Q G + ++ E+ L
Sbjct: 178 ASLEKALLDYAHERVCALGFRPITVPDIVSGEVTQACGVMQRSDHPIQYTLAGEESHTKL 237
Query: 376 KPMNCPGHCLMFDNRTRSWRELPLRLADFGVLHRNELSGALTG--LTRVRRFQQDDAHIF 433
G RT + +LP+RL R E+S + + L RV F + + +
Sbjct: 238 SGTAEMGIAAFLRGRTFNQDQLPIRLVSLSRCFRTEISKSASEAKLYRVHEFSKVEMFVV 297
Query: 434 CAPQQIEAEIVGCLEFLKCVYSTFG 458
P+Q AE+ +E K + G
Sbjct: 298 STPEQSAAELDYLVEVQKGTFQALG 322
>AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA
synthetase protein.
Length = 441
Score = 37.9 bits (84), Expect = 0.024
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Query: 317 AHIYNTLVNFIKEQYRSRGFHEVVTPNMYNAKLWQTSGHWAHYAENM-FSFDVEKETFAL 375
A + L+++ E+ + GF + P++ + ++ Q G + ++ E+ L
Sbjct: 178 ASLEKALLDYAHERVCALGFRPITVPDIVSGEVTQACGVMQRSDHPIQYTLAGEESHTKL 237
Query: 376 KPMNCPGHCLMFDNRTRSWRELPLRLADFGVLHRNELSGALTG--LTRVRRFQQDDAHIF 433
G RT + +LP+RL R E+S + + L RV F + + +
Sbjct: 238 SGTAEMGIAAFLRGRTFNQDQLPIRLVSLSRCFRTEISKSASEAKLYRVHEFSKVEMFVV 297
Query: 434 CAPQQIEAEIVGCLEFLKCVYSTFG 458
P+Q AE+ +E K + G
Sbjct: 298 STPEQSAAELDYLVEVQKGTFQALG 322
>Z82060-7|CAB04884.1| 454|Caenorhabditis elegans Hypothetical
protein T27F6.5a protein.
Length = 454
Score = 37.1 bits (82), Expect = 0.042
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 314 PRGAHIYNTLVNFIKEQYRSRGFHEVVTPNMYNAKLWQTSGHWAHYAENMFSF-DVEKET 372
P G + + L + ++++ G ++ P + +LW+ +G W M F D ++
Sbjct: 44 PLGQRVIDKLCRILDVEFQNSGALKIAMPIVGTQQLWEKTGRWEAMGPEMIRFHDRQQNH 103
Query: 373 FALKPMNCPGHC--LMFDNRTRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDA 430
L+P C L+ + PL + G R+E++ GL R R+F D
Sbjct: 104 MCLQP-TAEEMCTELIATLSPLKKSQFPLIVYQIGEKFRDEMNPRF-GLMRGRQFLMKDM 161
Query: 431 HIF 433
+ F
Sbjct: 162 YSF 164
>U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical
protein F42C5.3 protein.
Length = 250
Score = 31.1 bits (67), Expect = 2.8
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 1 MKEKKKKTEDTNAVSEMNPWPEYIQKRITLWDKYKAQYTEQIASKPDISVVVTLPDGKTV 60
+++K KK ED MN W + + ++I L ++ +YTE + + + G+
Sbjct: 44 LEKKNKKEEDDLREQNMNLWNKNLDQQIALGNELNNKYTEISNQNSRLQIKI----GQEE 99
Query: 61 EAKAWKTTPYDVAK 74
+ + +K DV+K
Sbjct: 100 DIRVFKIKLLDVSK 113
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 51 VVTLPDGKTV--EAKAWKTTPYDVAKGISQGLADATIIARVNNELWDL 96
+V+LPD K++ A+AWK K + + + +VNNEL DL
Sbjct: 92 IVSLPDPKSLLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELEDL 139
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 51 VVTLPDGKTV--EAKAWKTTPYDVAKGISQGLADATIIARVNNELWDL 96
+V+LPD K++ A+AWK K + + + +VNNEL DL
Sbjct: 92 IVSLPDPKSLLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELEDL 139
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 51 VVTLPDGKTV--EAKAWKTTPYDVAKGISQGLADATIIARVNNELWDL 96
+V+LPD K++ A+AWK K + + + +VNNEL DL
Sbjct: 92 IVSLPDPKSLLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELEDL 139
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.136 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,450,427
Number of Sequences: 27539
Number of extensions: 815938
Number of successful extensions: 1747
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1735
Number of HSP's gapped (non-prelim): 13
length of query: 703
length of database: 12,573,161
effective HSP length: 86
effective length of query: 617
effective length of database: 10,204,807
effective search space: 6296365919
effective search space used: 6296365919
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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