GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001848-TA|BGIBMGA001848-PA|undefined
         (340 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   3.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.8  

>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)

Query: 224 IVEPVYRRIEETFQENEKCD---LTEVDYI 250
           I E ++  IEETF ++ K D   L E+ Y+
Sbjct: 18  IQERIFEEIEETFSDDTKPDYKSLQELKYM 47


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 139 QPPLAYVANIFALPFST 155
           +P + YVANIF+L   T
Sbjct: 306 KPIVFYVANIFSLDLDT 322


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 24   IIQDSNTTKYYLPRDDRLQL 43
            +  D+N  +YYL    +LQL
Sbjct: 2243 VADDTNCAQYYLCNQGQLQL 2262


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 154 STGVWMAVAIASIASTVTLYITSLW 178
           ST V     +AS +++VT Y TSL+
Sbjct: 670 STHVGNYTCLASNSASVTTYTTSLF 694


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,183
Number of Sequences: 317
Number of extensions: 2931
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 340
length of database: 114,650
effective HSP length: 57
effective length of query: 283
effective length of database: 96,581
effective search space: 27332423
effective search space used: 27332423
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 43 (21.4 bits)