Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001848-TA|BGIBMGA001848-PA|undefined
(340 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U16126-1|AAC50420.1| 908|Homo sapiens EAA4 protein. 38 0.067
BC063814-1|AAH63814.1| 583|Homo sapiens GRIK2 protein protein. 38 0.067
AJ301610-1|CAC67487.1| 869|Homo sapiens GluR6 kainate receptor ... 38 0.067
AJ252246-1|CAC81020.1| 892|Homo sapiens kainate receptor subuni... 38 0.067
U16127-1|AAB60407.1| 919|Homo sapiens EAA5 protein. 36 0.27
AL355386-2|CAC40697.2| 872|Homo sapiens glutamate receptor, ion... 36 0.27
AL355386-1|CAI19119.1| 919|Homo sapiens glutamate receptor, ion... 36 0.27
AJ299451-1|CAC44965.1| 872|Homo sapiens glutamate receptor 7 pr... 36 0.27
AJ249210-1|CAC80548.1| 872|Homo sapiens glutamate/kainate recep... 36 0.27
U16125-1|AAA95961.1| 905|Homo sapiens EAA3 protein. 32 2.5
L19058-1|AAA52568.1| 918|Homo sapiens glutamate receptor protein. 32 2.5
AJ249208-1|CAC80546.1| 905|Homo sapiens glutamate receptor subu... 32 2.5
>U16126-1|AAC50420.1| 908|Homo sapiens EAA4 protein.
Length = 908
Score = 37.5 bits (83), Expect = 0.067
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 80 NGQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQ 139
NGQW+GMVR++ D+KAD L++ + + +E+ +I ++ + + ++R+
Sbjct: 495 NGQWNGMVRELIDHKAD--------LAVAPLAITYVREK--VIDFSKPFMTLGISILYRK 544
Query: 140 PPLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
P F P S +WM + +A + + L++
Sbjct: 545 PNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFV 580
>BC063814-1|AAH63814.1| 583|Homo sapiens GRIK2 protein protein.
Length = 583
Score = 37.5 bits (83), Expect = 0.067
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 80 NGQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQ 139
NGQW+GMVR++ D+KAD L++ + + +E+ +I ++ + + ++R+
Sbjct: 495 NGQWNGMVRELIDHKAD--------LAVAPLAITYVREK--VIDFSKPFMTLGISILYRK 544
Query: 140 PPLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
P F P S +WM + +A + + L++
Sbjct: 545 PNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFV 580
>AJ301610-1|CAC67487.1| 869|Homo sapiens GluR6 kainate receptor
protein.
Length = 869
Score = 37.5 bits (83), Expect = 0.067
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 80 NGQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQ 139
NGQW+GMVR++ D+KAD L++ + + +E+ +I ++ + + ++R+
Sbjct: 495 NGQWNGMVRELIDHKAD--------LAVAPLAITYVREK--VIDFSKPFMTLGISILYRK 544
Query: 140 PPLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
P F P S +WM + +A + + L++
Sbjct: 545 PNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFV 580
>AJ252246-1|CAC81020.1| 892|Homo sapiens kainate receptor subunit
protein.
Length = 892
Score = 37.5 bits (83), Expect = 0.067
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 80 NGQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQ 139
NGQW+GMVR++ D+KAD L++ + + +E+ +I ++ + + ++R+
Sbjct: 495 NGQWNGMVRELIDHKAD--------LAVAPLAITYVREK--VIDFSKPFMTLGISILYRK 544
Query: 140 PPLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
P F P S +WM + +A + + L++
Sbjct: 545 PNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFV 580
>U16127-1|AAB60407.1| 919|Homo sapiens EAA5 protein.
Length = 919
Score = 35.5 bits (78), Expect = 0.27
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 81 GQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQP 140
GQW+GMV+++ D+KAD L++ + H +E+ I ++ + + ++R+P
Sbjct: 498 GQWNGMVKELIDHKAD--------LAVAPLTITHVREK--AIDFSKPFMTLGVSILYRKP 547
Query: 141 PLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
+ F P S +WM V +A + + L++
Sbjct: 548 NGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
>AL355386-2|CAC40697.2| 872|Homo sapiens glutamate receptor,
ionotropic, kainate 3 protein.
Length = 872
Score = 35.5 bits (78), Expect = 0.27
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 81 GQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQP 140
GQW+GMV+++ D+KAD L++ + H +E+ I ++ + + ++R+P
Sbjct: 498 GQWNGMVKELIDHKAD--------LAVAPLTITHVREK--AIDFSKPFMTLGVSILYRKP 547
Query: 141 PLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
+ F P S +WM V +A + + L++
Sbjct: 548 NGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
>AL355386-1|CAI19119.1| 919|Homo sapiens glutamate receptor,
ionotropic, kainate 3 protein.
Length = 919
Score = 35.5 bits (78), Expect = 0.27
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 81 GQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQP 140
GQW+GMV+++ D+KAD L++ + H +E+ I ++ + + ++R+P
Sbjct: 498 GQWNGMVKELIDHKAD--------LAVAPLTITHVREK--AIDFSKPFMTLGVSILYRKP 547
Query: 141 PLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
+ F P S +WM V +A + + L++
Sbjct: 548 NGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
>AJ299451-1|CAC44965.1| 872|Homo sapiens glutamate receptor 7
protein.
Length = 872
Score = 35.5 bits (78), Expect = 0.27
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 81 GQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQP 140
GQW+GMV+++ D+KAD L++ + H +E+ I ++ + + ++R+P
Sbjct: 498 GQWNGMVKELIDHKAD--------LAVAPLTITHVREK--AIDFSKPFMTLGVSILYRKP 547
Query: 141 PLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
+ F P S +WM V +A + + L++
Sbjct: 548 NGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
>AJ249210-1|CAC80548.1| 872|Homo sapiens glutamate/kainate receptor
subtype GluR7 protein.
Length = 872
Score = 35.5 bits (78), Expect = 0.27
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 81 GQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQP 140
GQW+GMV+++ D+KAD L++ + H +E+ I ++ + + ++R+P
Sbjct: 498 GQWNGMVKELIDHKAD--------LAVAPLTITHVREK--AIDFSKPFMTLGVSILYRKP 547
Query: 141 PLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
+ F P S +WM V +A + + L++
Sbjct: 548 NGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
>U16125-1|AAA95961.1| 905|Homo sapiens EAA3 protein.
Length = 905
Score = 32.3 bits (70), Expect = 2.5
Identities = 21/95 (22%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 81 GQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQP 140
G+W+GMV+++ D++AD L++ + + +E+ +I ++ + + ++R+P
Sbjct: 496 GEWNGMVKELIDHRAD--------LAVAPLTITYVREK--VIDFSKPFMTLGISILYRKP 545
Query: 141 PLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
F P S +WM V +A + + L++
Sbjct: 546 NGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 580
>L19058-1|AAA52568.1| 918|Homo sapiens glutamate receptor protein.
Length = 918
Score = 32.3 bits (70), Expect = 2.5
Identities = 21/95 (22%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 81 GQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQP 140
G+W+GMV+++ D++AD L++ + + +E+ +I ++ + + ++R+P
Sbjct: 511 GEWNGMVKELIDHRAD--------LAVAPLTITYVREK--VIDFSKPFMTLGISILYRKP 560
Query: 141 PLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
F P S +WM V +A + + L++
Sbjct: 561 NGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 595
>AJ249208-1|CAC80546.1| 905|Homo sapiens glutamate receptor subunit
GluR5 protein.
Length = 905
Score = 32.3 bits (70), Expect = 2.5
Identities = 21/95 (22%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 81 GQWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQP 140
G+W+GMV+++ D++AD L++ + + +E+ +I ++ + + ++R+P
Sbjct: 496 GEWNGMVKELIDHRAD--------LAVAPLTITYVREK--VIDFSKPFMTLGISILYRKP 545
Query: 141 PLAYVANI-FALPFSTGVWMAVAIASIASTVTLYI 174
F P S +WM V +A + + L++
Sbjct: 546 NGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 580
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.137 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,567,813
Number of Sequences: 224733
Number of extensions: 1815440
Number of successful extensions: 3371
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3350
Number of HSP's gapped (non-prelim): 12
length of query: 340
length of database: 73,234,838
effective HSP length: 90
effective length of query: 250
effective length of database: 53,008,868
effective search space: 13252217000
effective search space used: 13252217000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 66 (30.7 bits)
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