Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001848-TA|BGIBMGA001848-PA|undefined
(340 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 29 0.077
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 25 1.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 2.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 2.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 6.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 6.7
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 22 6.7
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 22 6.7
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 22 6.7
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 22 6.7
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 22 6.7
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 22 6.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.7
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 28.7 bits (61), Expect = 0.077
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 82 QWSGMVRDIGDNKADLEYDLHYSLSLKGTSSMHFKERLEIITYTDLVAPMRMRFVFRQPP 141
+W+G++ ++ + +AD+ + L++ ER E I ++ + + ++P
Sbjct: 503 EWTGLIGELVNERADM---IVAPLTIN-------PERAEFIEFSKPFKYQGITILEKKPS 552
Query: 142 LAYVANIFALPFSTGVWMAVAIASIASTVTLYITSLWEIRIEKNPTQLDGSIGDALLLTM 201
+ F PFS +W+ V ++ + LY+ + DG+ DAL L+
Sbjct: 553 RSSTLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLANTDGTEEDALNLS- 611
Query: 202 SAV 204
SAV
Sbjct: 612 SAV 614
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 229 YRRIEETFQENEKCDLTEVDYINSLDAFTPVKKDSPYLELLRVSYKHVRE 278
+ R E++ E+ + + S D KKD Y +L V KH+RE
Sbjct: 231 HSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQLHNVEEKHLRE 280
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 108 KGTSSMHFKERLEIITYTDLVAPMRMRFVFRQPPLAYVANIFALPFSTG 156
KG + + D+ +R + PP Y+ + F P STG
Sbjct: 329 KGMELQEKSSKSLLANVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTG 377
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 108 KGTSSMHFKERLEIITYTDLVAPMRMRFVFRQPPLAYVANIFALPFSTG 156
KG + + D+ +R + PP Y+ + F P STG
Sbjct: 329 KGMELQEKSSKSLLANVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTG 377
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 108 KGTSSMHFKERLEIITYTDLVAPMRMRFVFRQPPLAYVANIFALPFSTG 156
KG + + D+ +R + PP Y+ + F P STG
Sbjct: 329 KGMELQEKSSKSLLANVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTG 377
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 108 KGTSSMHFKERLEIITYTDLVAPMRMRFVFRQPPLAYVANIFALPFSTG 156
KG + + D+ +R + PP Y+ + F P STG
Sbjct: 329 KGMELQEKSSKSLLANVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTG 377
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 108 KGTSSMHFKERLEIITYTDLVAPMRMRFVFRQPPLAYVANIFALPFSTG 156
KG + + D+ +R + PP Y+ + F P STG
Sbjct: 329 KGMELQEKSSKSLLANVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTG 377
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 108 KGTSSMHFKERLEIITYTDLVAPMRMRFVFRQPPLAYVANIFALPFSTG 156
KG + + D+ +R + PP Y+ + F P STG
Sbjct: 329 KGMELQEKSSKSLLANVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTG 377
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 108 KGTSSMHFKERLEIITYTDLVAPMRMRFVFRQPPLAYVANIFALPFSTG 156
KG + + D+ +R + PP Y+ + F P STG
Sbjct: 397 KGMELQEKSSKSLLANVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTG 445
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 108 KGTSSMHFKERLEIITYTDLVAPMRMRFVFRQPPLAYVANIFALPFSTG 156
KG + + D+ +R + PP Y+ + F P STG
Sbjct: 397 KGMELQEKSSKSLLANVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTG 445
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 14 KKDRRYDQLHNVEEKHLRE 32
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 14 KKDRRYDQLHNVEEKHLRE 32
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 14 KKDRRYDQLHNVEEKHLRE 32
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 14 KKDRRYDQLHNVEEKHLRE 32
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 14 KKDRRYDQLHNVEEKHLRE 32
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 14 KKDRRYDQLHNVEEKHLRE 32
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 14 KKDRRYDQLHNVEEKHLRE 32
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 263 KKDRRYDQLHNVEEKHLRE 281
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 263 KKDRRYDQLHNVEEKHLRE 281
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 263 KKDRRYDQLHNVEEKHLRE 281
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 263 KKDRRYDQLHNVEEKHLRE 281
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 263 KKDRRYDQLHNVEEKHLRE 281
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 263 KKDRRYDQLHNVEEKHLRE 281
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 260 KKDSPYLELLRVSYKHVRE 278
KKD Y +L V KH+RE
Sbjct: 263 KKDRRYDQLHNVEEKHLRE 281
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.324 0.137 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,054
Number of Sequences: 429
Number of extensions: 3513
Number of successful extensions: 34
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 24
length of query: 340
length of database: 140,377
effective HSP length: 58
effective length of query: 282
effective length of database: 115,495
effective search space: 32569590
effective search space used: 32569590
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)
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