GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001847-TA|BGIBMGA001847-PA|IPR002048|Calcium-binding
EF-hand, IPR011013|Galactose mutarotase-like
         (604 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    26   2.5  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      26   2.5  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    25   7.6  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 406 ATVAGTIEGPELAAMPVRHHPHHSVRSTDCRIYI 439
           A+ AG+  GPEL  M  R++P+  V ST+ + YI
Sbjct: 50  ASSAGSAAGPELFDMYARNYPY--VSSTEEQNYI 81


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 470 GVVTVRRISVVCSARALSLERVATGSIVRERDLDLHYKSDGHYESGVTGALERVLSRYM 528
           G V +R I     +  L + ++    +VRE   D  +K+D  ++S   GAL+     Y+
Sbjct: 45  GTVALREIRRYQKSTELLIRKLPFQRLVREIAQD--FKTDLRFQSAAIGALQEASEAYL 101


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 15/57 (26%), Positives = 25/57 (43%)

Query: 332 RMTAFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNVARIARALASHIYNITDDEND 388
           R TA  ++S Q+H+++    + DT    R       VA +     +HI+ I     D
Sbjct: 280 RATAAAVASDQAHREAQLRLLADTKKFTRFLVEAPPVASVEAVKFTHIFQILPPSYD 336


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.132    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,078
Number of Sequences: 2123
Number of extensions: 20567
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 39
Number of HSP's gapped (non-prelim): 4
length of query: 604
length of database: 516,269
effective HSP length: 68
effective length of query: 536
effective length of database: 371,905
effective search space: 199341080
effective search space used: 199341080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)