Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001847-TA|BGIBMGA001847-PA|IPR002048|Calcium-binding
EF-hand, IPR011013|Galactose mutarotase-like
(604 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81586-1|CAB04692.1| 557|Caenorhabditis elegans Hypothetical pr... 165 8e-41
AC006748-4|AAF60512.2| 371|Caenorhabditis elegans Hypothetical ... 38 0.015
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical p... 31 3.1
AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical ... 31 3.1
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 30 4.1
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 30 4.1
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 30 5.4
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 29 7.1
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 7.1
U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical pr... 29 7.1
U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop hel... 29 9.4
>Z81586-1|CAB04692.1| 557|Caenorhabditis elegans Hypothetical
protein T05F1.1 protein.
Length = 557
Score = 165 bits (401), Expect = 8e-41
Identities = 119/399 (29%), Positives = 191/399 (47%), Gaps = 24/399 (6%)
Query: 12 EFSVYRMQQYDLHTVPHGCRSASFNLEGRSLTSWSTSRHCVVARVQDITLEQFLEI-RNK 70
EF YR+ QY++ +GC++ + E SL + T R +V +D+ ++
Sbjct: 40 EFHAYRLHQYEISGNIYGCKNYRVSYEAVSLGA-RTLRRTMVTTWRDLLTTDVDDMWALS 98
Query: 71 AGALLLVLPKNETLLTPEEREHIQLLEMAMVQQEINAPVYFARWTPEMEDILADLQHSFI 130
GA+L+ +P N L +R+ LE ++ + + VY A + + IL D+
Sbjct: 99 TGAVLIFIPDNLDELNDIDRKAFIDLEAKLLSAKTDLAVYVAPFNDDAVSILHDVN---T 155
Query: 131 TDDKSGTALEAMFNTVSSNGYQIVVSAPTPQKLDS-KPVTLHGKLIGRSGSAQTIVIAAN 189
+K+ TAL+ + ++S N I S +P+ S KP+ + G+L +A TI A+
Sbjct: 156 RSEKAPTALQHLLQSLSGNTISITSSDQSPELPPSYKPLNIVGRLSSGDRAAPTIAFVAH 215
Query: 190 YDSAALVPEISQGADCNASGAVALLELARIFSRIYSTAGGRGAPTLVFVLTSVGHSLNYF 249
YD+ + VP +S GAD N SG VALLEL + S+ Y + R ++F+ T+ G LNY
Sbjct: 216 YDTQSAVPGVSPGADSNGSGIVALLELLAVLSKFYDSPSTRPPYNILFIWTAAG-KLNYQ 274
Query: 250 ATKKWLEEQ---LDSSD-----ASLLQD-VSFVSCMECVSR--GPVRMHVXXXXXXXXXX 298
T+ W++E DS+D S D V C+E + R G MH
Sbjct: 275 GTRHWIDEYQKGFDSADYAKSGLSRKDDRVDLAICIEAIGRKTGGFFMHAGKTPSENSVA 334
Query: 299 XXXXXXLGAPLQHKKINLADELL------AWHHERFSIRRMTAFTLSSLQSHKDSGRSTV 352
L + K I L + + AW HE+F+I+RM A TLS+L S D R+++
Sbjct: 335 AQLLRRLNSISPKKNIELVTKKISLTTVSAWEHEKFNIKRMPAITLSTLPSPSDPARNSI 394
Query: 353 LDTPSEDRIQNLVSNVARIARALASHIYNITDDENDEDA 391
LD PS L+ N+ I A+ +I ++ + D+
Sbjct: 395 LDLPSALDEDELIDNIRLIGEAVLGYILDLPESGPSSDS 433
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 547 YSPTSATLYVYSVKPAVFDLILTLAIVCYLAVVYF 581
+ T L VKPAVF+L++ + YL+ Y+
Sbjct: 502 FGVTQNRLVAERVKPAVFELVIAAGVFTYLSAFYY 536
>AC006748-4|AAF60512.2| 371|Caenorhabditis elegans Hypothetical
protein Y39A3B.1 protein.
Length = 371
Score = 38.3 bits (85), Expect = 0.015
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 178 SGSAQTIVIAANYDSAALVPEISQGADCNASGAVALLELARIFSRIYSTAGGRGAPTLVF 237
+G+ + ++++ANYD+ E +QG D N SG A+LE AR+ S + + + T+V+
Sbjct: 94 TGNDKMMILSANYDTL----EGNQGVDDNGSGVAAVLEAARVLSTLDNLYSRQN--TIVY 147
Query: 238 VLTSVGH 244
V + H
Sbjct: 148 VFFDMKH 154
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
protein F45E4.4 protein.
Length = 2361
Score = 31.5 bits (68), Expect = 1.8
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 82 ETLLTPEEREHIQLLEMAMVQQEINAPVYFARWTPEMEDILADLQHSFITDDKSGTALE- 140
E LT EE+EHI +E AM +++NAP F + + + + + S ++
Sbjct: 599 EIELTEEEKEHIARIE-AMASEDLNAPSPFIQQEQRVATMPVPINYHVEEPTLSQEEIDH 657
Query: 141 -AMFNTVSSNGYQIVVSAPTPQKLDSKP 167
A +++ + + PTPQ ++P
Sbjct: 658 IARITAMATEDNTDLQTLPTPQVKQNEP 685
>Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 30.7 bits (66), Expect = 3.1
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 117 EMEDILADLQHSFITDDKSGTALEAMFNTVSSNGYQIVVSAPTPQKLDSKPVTLHGKLIG 176
E+E+ A +T D G T++ +G +IVV KL+ +G LIG
Sbjct: 60 ELENAAARSVAGSLTSDPKGLDHRVESLTITFHGREIVVDT----KLELNRGRRYG-LIG 114
Query: 177 RSGSAQTIVIAANYDSAALVPE 198
+GS ++ +I A Y+ +PE
Sbjct: 115 LNGSGKSTIIQAIYNKEMPIPE 136
>AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 30.7 bits (66), Expect = 3.1
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 117 EMEDILADLQHSFITDDKSGTALEAMFNTVSSNGYQIVVSAPTPQKLDSKPVTLHGKLIG 176
E+E+ A +T D G T++ +G +IVV KL+ +G LIG
Sbjct: 60 ELENAAARSVAGSLTSDPKGLDHRVESLTITFHGREIVVDT----KLELNRGRRYG-LIG 114
Query: 177 RSGSAQTIVIAANYDSAALVPE 198
+GS ++ +I A Y+ +PE
Sbjct: 115 LNGSGKSTIIQAIYNKEMPIPE 136
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 330 IRRMTAFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNVARIARALASHIYNITDDENDE 389
+ ++T+F +S H+ + ++ ED IQ++V R H + DD++DE
Sbjct: 176 VPKITSFFYASATKHRVDRKK--VEEELEDEIQDIVEESMRTVERRKKH--DNDDDDDDE 231
Query: 390 DAGLYDDVLLPAR 402
D +D+ P R
Sbjct: 232 DGNEFDNRHDPKR 244
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 330 IRRMTAFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNVARIARALASHIYNITDDENDE 389
+ ++T+F +S H+ + ++ ED IQ++V R H + DD++DE
Sbjct: 174 VPKITSFFYASATKHRVDRKK--VEEELEDEIQDIVEESMRTVERRKKH--DNDDDDDDE 229
Query: 390 DAGLYDDVLLPAR 402
D +D+ P R
Sbjct: 230 DGNEFDNRHDPKR 242
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 330 IRRMTAFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNVARIARALASHIYNITDDENDE 389
+ ++T+F +S H+ + ++ ED IQ++V R H + DD++DE
Sbjct: 176 VPKITSFFYASATKHRVDRKK--VEEELEDEIQDIVEESMRTVERRKKH--DNDDDDDDE 231
Query: 390 DAGLYDDVLLPAR 402
D +D+ P R
Sbjct: 232 DGNEFDNRHDPKR 244
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 330 IRRMTAFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNVARIARALASHIYNITDDENDE 389
+ ++T+F +S H+ + ++ ED IQ++V R H + DD++DE
Sbjct: 174 VPKITSFFYASATKHRVDRKK--VEEELEDEIQDIVEESMRTVERRKKH--DNDDDDDDE 229
Query: 390 DAGLYDDVLLPAR 402
D +D+ P R
Sbjct: 230 DGNEFDNRHDPKR 242
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 29.9 bits (64), Expect = 5.4
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 25/160 (15%)
Query: 70 KAGALL---LVLPKNETLLTPEEREHIQLLEMAMVQQEINAPVYFARWTPEMEDILADLQ 126
KAGA+ + LP T + PE+ Q L++ P AR T E IL D+
Sbjct: 112 KAGAIAPCDVKLPPQNTGMGPEKTSFFQALQI---------PTKIARGTIE---ILNDV- 158
Query: 127 HSFITDDKSGTALEAMFNT--VSSNGYQIVV-------SAPTPQKLDSKPVTLHGKLIGR 177
H DK G + A+ N V+ Y +VV + TP+ LD L + +
Sbjct: 159 HLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSG 218
Query: 178 SGSAQTIVIAANYDSAALVPEISQGADCNASGAVALLELA 217
+ ++ +A NY + A V N G A+ +++
Sbjct: 219 VRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVS 258
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 335 AFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNVARIARAL 375
A+ ++++ K GR D PSE R++ + S + RI A+
Sbjct: 1141 AYNEQTIRNAKMLGREIFCDLPSEQRVERINSQIDRIQTAI 1181
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical protein
C53B4.4c protein.
Length = 1304
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 335 AFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNVARIARAL 375
A+ ++++ K GR D PSE R++ + S + RI A+
Sbjct: 1141 AYNEQTIRNAKMLGREIFCDLPSEQRVERINSQIDRIQTAI 1181
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 335 AFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNVARIARAL 375
A+ ++++ K GR D PSE R++ + S + RI A+
Sbjct: 1423 AYNEQTIRNAKMLGREIFCDLPSEQRVERINSQIDRIQTAI 1463
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 335 AFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNVARIARAL 375
A+ ++++ K GR D PSE R++ + S + RI A+
Sbjct: 1421 AYNEQTIRNAKMLGREIFCDLPSEQRVERINSQIDRIQTAI 1461
>U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical
protein C17H11.1 protein.
Length = 475
Score = 29.5 bits (63), Expect = 7.1
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 545 TLYSPTSATL-YVYSVKPAVFDLILTLAIVCYLAVVYFAIQAFPRFYEEY 593
TL SP+ T+ ++Y A+FDLI I+ + +V AF +Y Y
Sbjct: 74 TLRSPSLQTVPFMYIKSLAIFDLIALTMILIHYCLVSTTKMAFVMYYTTY 123
>U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop helix
protein 14 protein.
Length = 246
Score = 29.1 bits (62), Expect = 9.4
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 5 NPVAASHEFSVYRMQQY---DLHTVPHGCRSASFNLEGRSLTSWSTS 48
N A EFS+Y Q Y + +VPHG S +FN S++S S S
Sbjct: 183 NNYAVKEEFSMYLPQNYCPQNQMSVPHGDVSHNFNSPTSSVSSSSYS 229
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.132 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,423,302
Number of Sequences: 27539
Number of extensions: 519139
Number of successful extensions: 1460
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1447
Number of HSP's gapped (non-prelim): 21
length of query: 604
length of database: 12,573,161
effective HSP length: 86
effective length of query: 518
effective length of database: 10,204,807
effective search space: 5286090026
effective search space used: 5286090026
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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