Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001847-TA|BGIBMGA001847-PA|IPR002048|Calcium-binding
EF-hand, IPR011013|Galactose mutarotase-like
(604 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g44330.1 68416.m04763 expressed protein 153 2e-37
At3g52640.2 68416.m05800 nicastrin-related contains weak similar... 36 0.059
At3g52640.1 68416.m05799 nicastrin-related contains weak similar... 36 0.059
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 35 0.18
At5g13260.1 68418.m01523 expressed protein 33 0.41
At1g22150.1 68414.m02769 sulfate transporter (Sultr1;3) identica... 30 3.8
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 30 5.1
At3g55660.1 68416.m06184 expressed protein contains Pfam profile... 30 5.1
At5g05940.1 68418.m00657 expressed protein contains Pfam profile... 29 6.7
At5g28270.1 68418.m03430 hypothetical protein similar to At2g121... 29 8.9
At3g11150.1 68416.m01351 expressed protein 29 8.9
>At3g44330.1 68416.m04763 expressed protein
Length = 565
Score = 153 bits (372), Expect = 2e-37
Identities = 125/400 (31%), Positives = 193/400 (48%), Gaps = 48/400 (12%)
Query: 15 VYRMQQYDLHTVPHGCRSASFNLEGRSLT---SWSTSRHCVVARVQDITL---EQFLEIR 68
VYR+ QYD+ VP G R +S N SL+ SR ++ ++++ + + ++ +
Sbjct: 44 VYRLIQYDISGVPFGSRFSSLNHHAASLSFQRGADLSRSVLILPLRELDIAFVQDYISQK 103
Query: 69 NKAGALLLVLPKNET-------LLTPEE---REHIQLLEMAMVQQEINAPVYFARWTPEM 118
G LL++LP+ L+ E R + LE +V I PVYFA E
Sbjct: 104 QSLGGLLILLPQTFRPGNVGGGSLSSENDGFRSLLGQLEKLLVHGNIPFPVYFAFENEET 163
Query: 119 EDILADLQHSFITDDKSGTALEAMFNTVSSNGYQIVVSAPTPQKLDSKPVT-----LHG- 172
+ +LAD++ + D G T ++ GY++V+S P+K+ S +T L G
Sbjct: 164 DAMLADVKKN----DALGQQA-----TATTGGYKLVISVSEPRKIASPTITNIQGWLPGL 214
Query: 173 KLIGRSGSAQTIVIAANYDSAALVPEISQGADCNASGAVALLELARIFSRIYSTAGGRGA 232
+ G S TI + A+YD+ P +S G+D N SG VALLE+AR+FS +YS RG
Sbjct: 215 RAEGDSSQLPTIAVVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSVLYSNPKTRGK 274
Query: 233 PTLVFVLTSVGHSLNYFATKKWLEEQLDSSDASLLQDVSFVSCMECVSR--GPVRMHVXX 290
L+F LTS G NY T+KWL+ S D + + + + C+ V + +HV
Sbjct: 275 YNLLFALTS-GGPYNYEGTQKWLK----SLDQRMRESIDYAICLNSVGSWDSELLIHVSK 329
Query: 291 ------XXXXXXXXXXXXXXLG--APLQHKKINLADELLAWHHERFSIRRMTAFTLSSLQ 342
LG L+HKKIN+++ +AW HE+FS R+TA TLS L
Sbjct: 330 PPDNAYIKQIFEGFSNVAEDLGFQVALKHKKINISNSRVAWEHEQFSRLRVTAATLSELS 389
Query: 343 SHKD--SGRSTVLDTPSEDRIQNLVSNVARIARALASHIY 380
+ + ++ DT ++ V +A +LA HIY
Sbjct: 390 TPPELLENAGSLSDTRQLVNEDAIIKGVKLVAESLAKHIY 429
Score = 39.5 bits (88), Expect = 0.006
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 519 ALERVLSRYM-EVTVSTHAVDKREPEYTLYSPTSATLYVYSVKPAVFDLILTLAIVCYLA 577
AL++ L Y EV+V ++D +T Y T A+L +Y V FDL+L L + YL
Sbjct: 478 ALKKELEDYTAEVSVQHESLDG---SFTFYDSTKASLNIYQVASVTFDLLLLLVLGSYLI 534
Query: 578 VVY 580
V++
Sbjct: 535 VLF 537
>At3g52640.2 68416.m05800 nicastrin-related contains weak similarity
to Nicastrin precursor (Swiss-Prot:Q92542) [Homo
sapiens]
Length = 705
Score = 36.3 bits (80), Expect = 0.059
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 175 IGRSGSAQTIVIA-ANYDSAALVPEISQGADCNASGAVALLELARIFSRIYSTAGGRGAP 233
+ S + + +V+ A+ D+A+ + S GAD SG VALL SR+ + +
Sbjct: 243 VSSSNNRKPVVLTVASMDTASFFRDKSFGADSPISGLVALLGAVDALSRVDGISNLK--K 300
Query: 234 TLVFVLTSVGHSLNYFATKKWLEE-QLDSSDASLLQDVSFVSCMECVSRG 282
LVF L G + Y ++++L E L S + L + S + +E S G
Sbjct: 301 QLVF-LVLTGETWGYLGSRRFLHELDLHSDAVAGLSNTSIETVLEIGSVG 349
>At3g52640.1 68416.m05799 nicastrin-related contains weak similarity
to Nicastrin precursor (Swiss-Prot:Q92542) [Homo
sapiens]
Length = 676
Score = 36.3 bits (80), Expect = 0.059
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 175 IGRSGSAQTIVIA-ANYDSAALVPEISQGADCNASGAVALLELARIFSRIYSTAGGRGAP 233
+ S + + +V+ A+ D+A+ + S GAD SG VALL SR+ + +
Sbjct: 243 VSSSNNRKPVVLTVASMDTASFFRDKSFGADSPISGLVALLGAVDALSRVDGISNLK--K 300
Query: 234 TLVFVLTSVGHSLNYFATKKWLEE-QLDSSDASLLQDVSFVSCMECVSRG 282
LVF L G + Y ++++L E L S + L + S + +E S G
Sbjct: 301 QLVF-LVLTGETWGYLGSRRFLHELDLHSDAVAGLSNTSIETVLEIGSVG 349
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 34.7 bits (76), Expect = 0.18
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Query: 32 SASFNLEGRSLTSWSTSRHCVVARVQDITLEQFLEIRNKAGALLLVLPKNETLLTPEERE 91
+A+ +++ LTS H +A +D+ EQ L+++ + A + + + + ++ E
Sbjct: 597 AATASVKVAELTS-KLQEHEHIAGERDVLNEQVLQLQKELQAAQSSIDEQKQAHSQKQSE 655
Query: 92 HIQLLEMAMVQQEINAPVYFARWTPEMEDILADLQHSFITDDKSGTALEAMFNTVSSNGY 151
L+ + Q+EI A + E E ++ DL+ D EAM V S
Sbjct: 656 LESALKKS--QEEIEAK---KKAVTEFESMVKDLEQKVQLADAKTKETEAMDVGVKSRDI 710
Query: 152 QIVVSAPTPQKLDSKP 167
+ S+PT +K KP
Sbjct: 711 DLSFSSPTKRKSKKKP 726
>At5g13260.1 68418.m01523 expressed protein
Length = 537
Score = 33.5 bits (73), Expect = 0.41
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 339 SSLQSHKDSGRSTVLDTPSEDRIQNLVSNVA--RIARALASHIYNITDDENDEDAGLYDD 396
SS H + S+V + + R QN+ + A R+A+ +AS N DD++D+D DD
Sbjct: 30 SSPARHHHARSSSVTNMSNVKRAQNVAAKAAAQRLAKVMASQTNNDDDDDDDDDEVGGDD 89
Query: 397 V 397
+
Sbjct: 90 L 90
>At1g22150.1 68414.m02769 sulfate transporter (Sultr1;3) identical
to sulfate tansporter Sultr1;3 [Arabidopsis thaliana]
GI:10716805; contains Pfam profile PF00916: Sulfate
transporter family; contains Pfam profile PF01740: STAS
domain; contains TIGRfam profile TIGR00815: sulfate
permease
Length = 656
Score = 30.3 bits (65), Expect = 3.8
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 125 LQHSFITD-DKSGT-ALEAMFNTVSSNGYQIVVSAPTPQKLDSKPVTLHGKLIGRSGSAQ 182
++ S +TD D SG ALE ++ ++ Q+V++ P P ++ V+ LIG
Sbjct: 580 IEMSPVTDIDTSGIHALEDLYKSLQKRDIQLVLANPGPPVINKLHVSHFADLIGHDKIFL 639
Query: 183 TIVIAANYDSAALVPEI 199
T+ A + S L E+
Sbjct: 640 TVAEAVDSCSPKLSDEV 656
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 29.9 bits (64), Expect = 5.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 33 ASFNLEGRSLTSWSTSRHCVVARVQDITLEQFLEIRNKAGALLLVLPKNETLLTPEEREH 92
ASF LE R + +W + R Q++ +E+ E + A LL K + L E+RE
Sbjct: 219 ASFLLEQRLIKAWLADKDAEALRCQNLLVEE-EEAARRRKAELLERKKRKKLRQKEQREK 277
Query: 93 IQ 94
Q
Sbjct: 278 DQ 279
>At3g55660.1 68416.m06184 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 579
Score = 29.9 bits (64), Expect = 5.1
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 317 ADELLAWHHERFSIRRMTAFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSNV-ARIARAL 375
A+ LL +RF R TA S +Q +KD G+S +L++ S +++L ++ RI L
Sbjct: 409 AESLLIRLKQRFPGLRQTALDTSKIQYNKDVGKS-ILESYSR-VLESLAYSIGVRIEEVL 466
Query: 376 ASHIYNITDDENDEDA 391
+ D + D+D+
Sbjct: 467 FMDDISKDDGDGDDDS 482
>At5g05940.1 68418.m00657 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 611
Score = 29.5 bits (63), Expect = 6.7
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 314 INLADELLAWHHERFSIRRMTAFTLSSLQSHKDSGRSTVLDTPSEDRIQNLVSN-VARIA 372
+ ++ LL +RF T+ +S +Q +KD G+S +L++ S +++L SN +ARI
Sbjct: 404 VERSETLLRCLKQRFPSLTQTSLDISKIQWNKDIGKS-ILESYSR-ALESLASNIIARID 461
Query: 373 RAL-ASHIYNITDDEN 387
L + +DD N
Sbjct: 462 DLLYVDDLTKQSDDNN 477
>At5g28270.1 68418.m03430 hypothetical protein similar to At2g12100,
At2g05450, At1g45090, At2g16180, At2g06750
Length = 574
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 111 FARWTPEMEDILADLQHSFITDDKSGTALEAMFNTVSSNGYQIVVSAPTPQKLDSKPVTL 170
F P+ + IL+D ++DD S ++ + + VS N + VV AP QKL+ + L
Sbjct: 490 FEELLPQSKQILSDPGIDKMSDDASSSSNQDVAKGVSGNREEEVV-APESQKLEEHRIEL 548
>At3g11150.1 68416.m01351 expressed protein
Length = 371
Score = 29.1 bits (62), Expect = 8.9
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 190 YDSAALVPEISQGADCNASGAVALLELARIFSRIYSTAGGRGAPTLVFVLTSVGHSLNYF 249
Y++ A P ADC+ + L R F+R G + L L G+ F
Sbjct: 140 YEADAETPSFCLDADCSTDSSELNLSSLREFTRTLEKVGLKTVEMLANAL-GFGYDSTRF 198
Query: 250 ATKKWLEEQLDSSDASLLQD-VSFVSCME 277
T W+ + + + + FV C++
Sbjct: 199 NTLMWVNQGVPDDEPEVTNGFYPFVVCLQ 227
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.132 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,726,970
Number of Sequences: 28952
Number of extensions: 490615
Number of successful extensions: 1250
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1242
Number of HSP's gapped (non-prelim): 13
length of query: 604
length of database: 12,070,560
effective HSP length: 85
effective length of query: 519
effective length of database: 9,609,640
effective search space: 4987403160
effective search space used: 4987403160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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