BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001845-TA|BGIBMGA001845-PA|undefined (236 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_19193| Best HMM Match : zf-MYND (HMM E-Value=0.00017) 33 0.21 SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06) 33 0.21 SB_23347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3 SB_1075| Best HMM Match : rve (HMM E-Value=0.0089) 29 3.3 SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 29 4.4 SB_8725| Best HMM Match : Crl (HMM E-Value=2.1) 28 7.7 SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07) 28 7.7 SB_51614| Best HMM Match : ROK (HMM E-Value=7) 28 7.7 SB_31348| Best HMM Match : ERM (HMM E-Value=0) 28 7.7 SB_3898| Best HMM Match : CITED (HMM E-Value=1.5) 28 7.7 >SB_19193| Best HMM Match : zf-MYND (HMM E-Value=0.00017) Length = 294 Score = 33.1 bits (72), Expect = 0.21 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Query: 104 RFRETKARARLAERAEHIPLLSLDEVEFEDIMQELCQACAHVEQRALVVLAFL-CEVCAR 162 ++ E K R +A R +I + L E F ++ + Q+ +H Q + +LA L C C Sbjct: 37 KYTEEKGRHTIAARDINIGDVLLVEKPFASVLLQE-QSKSHCHQCFVHILAPLPCSYCTT 95 Query: 163 AVRVGGWCRAAEWSAKHVAQC 183 C W A H A+C Sbjct: 96 VRYCSEKCAKESWDAYHYAEC 116 >SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06) Length = 357 Score = 33.1 bits (72), Expect = 0.21 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Query: 104 RFRETKARARLAERAEHIPLLSLDEVEFEDIMQELCQACAHVEQRALVVLAFL-CEVCAR 162 ++ E K R +A R +I + L E F ++ + Q+ +H Q + +LA L C C Sbjct: 241 KYTEEKGRHTIAARDINIGDVLLVEKPFASVLLQE-QSKSHCHQCFVHILAPLPCSYCTT 299 Query: 163 AVRVGGWCRAAEWSAKHVAQC 183 C W A H A+C Sbjct: 300 VRYCSEKCAKESWDAYHYAEC 320 >SB_23347| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 465 Score = 29.1 bits (62), Expect = 3.3 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Query: 73 PPPCMLASAKPDQRGWWLYWRDWRSLERAARRFRETKARARLAERAEH 120 PP C++ + D GWW+ + + ++AA T A A +AE +H Sbjct: 370 PPSCLIGLSM-DWEGWWMLDEEAKEAKKAA-----TAAGASIAEHIKH 411 >SB_1075| Best HMM Match : rve (HMM E-Value=0.0089) Length = 1617 Score = 29.1 bits (62), Expect = 3.3 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Query: 75 PC-MLASAKPDQRGWWLYWRDWRSLERAARRFRETKARARL---AERAEHIPLLSLDEVE 130 PC +L + G +YW W+ L RR E +A + A AEHI ++V+ Sbjct: 69 PCRLLEEERQFTSGLSMYWEGWQMLNEVPRRKEEETKKAAVAAGASIAEHIKHAIAEQVK 128 >SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) Length = 781 Score = 28.7 bits (61), Expect = 4.4 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 92 WRDWRSLERAARRFRETK--ARARLAERAEHIPLLSLDEVEFE 132 W WR L A+ ETK A A A AEHI ++V+ E Sbjct: 175 WEGWRMLNEEAKEAEETKKAATAAGAYIAEHIKHAIAEQVKHE 217 >SB_8725| Best HMM Match : Crl (HMM E-Value=2.1) Length = 221 Score = 27.9 bits (59), Expect = 7.7 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Query: 92 WRDWRSLERAARRFRETK--ARARLAERAEHIPLLSLDEVE 130 W WR L A+ ETK A A A AEHI +E++ Sbjct: 90 WEGWRMLNEEAKEAEETKKAATAAGAVIAEHIKHAIAEEIK 130 >SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07) Length = 599 Score = 27.9 bits (59), Expect = 7.7 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 89 WLYWRDWRSLERAARRFRETKARARLAERAEHIPLLSLDEVEFEDIMQELCQACA 143 W ++DWR ++ + FR+ AR + E+ + ++ EDIM ++ A A Sbjct: 42 WHEYQDWRKCQKPMKDFRDCMARQQAQEKEG-----NNNKTPCEDIMSDIPHAWA 91 >SB_51614| Best HMM Match : ROK (HMM E-Value=7) Length = 727 Score = 27.9 bits (59), Expect = 7.7 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Query: 92 WRDWRSLERAARRFRETK--ARARLAERAEHI 121 W WR L A+ ETK A A A AEHI Sbjct: 114 WESWRMLNEEAKEAEETKKAATAAGASIAEHI 145 >SB_31348| Best HMM Match : ERM (HMM E-Value=0) Length = 665 Score = 27.9 bits (59), Expect = 7.7 Identities = 10/32 (31%), Positives = 18/32 (56%) Query: 10 VQPLEEYDGPRAPLIRQVSLDEERRDDCQGHW 41 ++P YD +AP++R ++ RD C H+ Sbjct: 394 IKPGSSYDDYKAPMVRGINCKHYSRDTCLMHF 425 >SB_3898| Best HMM Match : CITED (HMM E-Value=1.5) Length = 1166 Score = 27.9 bits (59), Expect = 7.7 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Query: 92 WRDWRSLERAARRFRETK--ARARLAERAEHI 121 W WR L A+ ETK A A A AEHI Sbjct: 114 WESWRMLNEEAKEAEETKKAATAAGASIAEHI 145 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.324 0.136 0.463 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,030,019 Number of Sequences: 59808 Number of extensions: 244257 Number of successful extensions: 866 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 865 Number of HSP's gapped (non-prelim): 10 length of query: 236 length of database: 16,821,457 effective HSP length: 80 effective length of query: 156 effective length of database: 12,036,817 effective search space: 1877743452 effective search space used: 1877743452 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.5 bits) S2: 59 (27.9 bits)
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