GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001845-TA|BGIBMGA001845-PA|undefined
         (236 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    33   0.007
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.5  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   5.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   5.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   7.8  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 33.1 bits (72), Expect = 0.007
 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 95  WRSLERAARRFRETKARARLAERAEHIPLLSLDEVEFEDIMQELCQACAHVEQR 148
           W +LE  A R +E K R RLA+RA H  L S    EF+     L +   H  QR
Sbjct: 276 WWTLEIEALR-KECKHRDRLAQRAFHTDLYSTFRDEFKVARNALKRLIKHTRQR 328


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 16   YDGPRAPLIRQVSLDEERRDDCQGHW 41
            YD PR   +R++  DE  R   Q  W
Sbjct: 1716 YDDPRTVRVREIIYDEIDRPIMQTKW 1741


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 14/68 (20%), Positives = 27/68 (39%)

Query: 89  WLYWRDWRSLERAARRFRETKARARLAERAEHIPLLSLDEVEFEDIMQELCQACAHVEQR 148
           W+Y   +     +  R+R TK   + A+  E  P  +    + + +  E  +     E+R
Sbjct: 468 WVYCTRYSDRPSSGPRYRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKR 527

Query: 149 ALVVLAFL 156
              + A L
Sbjct: 528 RQTLSAEL 535


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 14/68 (20%), Positives = 27/68 (39%)

Query: 89  WLYWRDWRSLERAARRFRETKARARLAERAEHIPLLSLDEVEFEDIMQELCQACAHVEQR 148
           W+Y   +     +  R+R TK   + A+  E  P  +    + + +  E  +     E+R
Sbjct: 468 WVYCTRYSDRPSSGPRYRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKR 527

Query: 149 ALVVLAFL 156
              + A L
Sbjct: 528 RQTLSAEL 535


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)

Query: 174 EWSAKHVAQCATPWAIRHGGWSH 196
           EW     A  A P A R+  W+H
Sbjct: 882 EWQRAWDAAAAAPTASRYAVWAH 904


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.136    0.463 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,592
Number of Sequences: 2123
Number of extensions: 7603
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 5
length of query: 236
length of database: 516,269
effective HSP length: 62
effective length of query: 174
effective length of database: 384,643
effective search space: 66927882
effective search space used: 66927882
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 47 (23.0 bits)