GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001845-TA|BGIBMGA001845-PA|undefined
         (236 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X77652-1|CAA54732.1| 1108|Drosophila melanogaster putative golgi...    28   9.7  
BT021227-1|AAX33375.1|  124|Drosophila melanogaster RH43429p pro...    28   9.7  
AY119464-1|AAM50118.1| 1108|Drosophila melanogaster GH03876p pro...    28   9.7  
AJ132715-1|CAA10755.1| 1108|Drosophila melanogaster alpha-mannos...    28   9.7  
AE014297-932|AAF54375.1| 1108|Drosophila melanogaster CG18802-PA...    28   9.7  

>X77652-1|CAA54732.1| 1108|Drosophila melanogaster putative golgi
           alpha-mannosidaseII protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 92  WRDWRSLERAARRFRETKARARLAERAEHIPLLSLDEV--EFEDIMQELCQACAHVEQRA 149
           W  W  + R   R  + +    L +  + I   +   V  ++E  MQE  +AC  V Q++
Sbjct: 508 WHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQS 567

Query: 150 L 150
           +
Sbjct: 568 V 568


>BT021227-1|AAX33375.1|  124|Drosophila melanogaster RH43429p
           protein.
          Length = 124

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 86  RGWWLY--WRDWRSLERAARRFRETKAR 111
           R WW +  WR WR   R +RRF  +  R
Sbjct: 35  RRWWRWSRWRRWRRWSRWSRRFERSCQR 62


>AY119464-1|AAM50118.1| 1108|Drosophila melanogaster GH03876p
           protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 92  WRDWRSLERAARRFRETKARARLAERAEHIPLLSLDEV--EFEDIMQELCQACAHVEQRA 149
           W  W  + R   R  + +    L +  + I   +   V  ++E  MQE  +AC  V Q++
Sbjct: 508 WHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQS 567

Query: 150 L 150
           +
Sbjct: 568 V 568


>AJ132715-1|CAA10755.1| 1108|Drosophila melanogaster
           alpha-mannosidase II protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 92  WRDWRSLERAARRFRETKARARLAERAEHIPLLSLDEV--EFEDIMQELCQACAHVEQRA 149
           W  W  + R   R  + +    L +  + I   +   V  ++E  MQE  +AC  V Q++
Sbjct: 508 WHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQS 567

Query: 150 L 150
           +
Sbjct: 568 V 568


>AE014297-932|AAF54375.1| 1108|Drosophila melanogaster CG18802-PA
           protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 92  WRDWRSLERAARRFRETKARARLAERAEHIPLLSLDEV--EFEDIMQELCQACAHVEQRA 149
           W  W  + R   R  + +    L +  + I   +   V  ++E  MQE  +AC  V Q++
Sbjct: 508 WHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQS 567

Query: 150 L 150
           +
Sbjct: 568 V 568


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.136    0.463 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,109,806
Number of Sequences: 52641
Number of extensions: 364046
Number of successful extensions: 1241
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1241
Number of HSP's gapped (non-prelim): 5
length of query: 236
length of database: 24,830,863
effective HSP length: 83
effective length of query: 153
effective length of database: 20,461,660
effective search space: 3130633980
effective search space used: 3130633980
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 60 (28.3 bits)