Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001843-TA|BGIBMGA001843-PA|IPR013026|Tetratricopeptide
region
(243 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical pr... 32 0.33
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 31 1.00
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 31 1.00
Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical p... 29 3.0
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 29 4.0
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 29 4.0
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 29 4.0
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 29 4.0
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 29 4.0
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 28 5.3
AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical ... 28 7.0
>U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical
protein F41C3.5 protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 175 DDTPDPHINSKNRTASLVVLPPLVLGYDELYDENTEDAKDEGNKNIEAND---KIDIPVM 231
D P+P +NSK L + P + +DEL T+ + + KN + K D+P +
Sbjct: 268 DCDPNPSVNSKRMKHMLRGVAPAMAHFDELLKNQTKTSLYQFLKNKSQSQKPLKADVPCL 327
Query: 232 NNNE 235
N+ E
Sbjct: 328 NDTE 331
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 30.7 bits (66), Expect = 1.00
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 47 DVDASLARLKTALTAHPECVAAHTNLGLALIAKKKFVAALTCLQRAVWAAPLN 99
++D + ++AL P A LGL + K++ + ALT +Q+AV P N
Sbjct: 610 ELDKAAGSFRSALLLSPRDYRAWYGLGLVHLKKEQNLTALTNIQKAVNINPTN 662
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 30.7 bits (66), Expect = 1.00
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 47 DVDASLARLKTALTAHPECVAAHTNLGLALIAKKKFVAALTCLQRAVWAAPLN 99
++D + ++AL P A LGL + K++ + ALT +Q+AV P N
Sbjct: 610 ELDKAAGSFRSALLLSPRDYRAWYGLGLVHLKKEQNLTALTNIQKAVNINPTN 662
>Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical
protein F58A4.14 protein.
Length = 443
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 47 DVDASLARLKTALTAHPECVAAHTNLGLALIAKKKFVAALTCLQRAVWAAPLN 99
D D +L + + A N+G+ L+A+ K A+ + L++A + PLN
Sbjct: 282 DHDVALNKYRVAADVSDYNGCLWNNIGIGLLARNKPAASHSALKKAAFINPLN 334
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 182 INSKNRTASLVVLPPLVLGYDELYDENTEDAKDEGNKNIEANDK 225
+ ++RT L+ + PL+ L++E D D+G + A K
Sbjct: 12 VEPEHRTPDLMDIDPLIANLKALHEETRSDDDDDGQPSTSAKRK 55
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 49 DASLARLKTALTAHPECVAAHTNLGLALIAKKKFVAALTCLQRAVWAAP 97
DA+ LK AL +PE AAH+NL L + K A+ + A+ AP
Sbjct: 449 DATRLYLK-ALEIYPEFAAAHSNLASILQQQGKLNDAILHYKEAIRIAP 496
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 49 DASLARLKTALTAHPECVAAHTNLGLALIAKKKFVAALTCLQRAVWAAP 97
DA+ LK AL +PE AAH+NL L + K A+ + A+ AP
Sbjct: 271 DATRLYLK-ALEIYPEFAAAHSNLASILQQQGKLNDAILHYKEAIRIAP 318
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 49 DASLARLKTALTAHPECVAAHTNLGLALIAKKKFVAALTCLQRAVWAAP 97
DA+ LK AL +PE AAH+NL L + K A+ + A+ AP
Sbjct: 449 DATRLYLK-ALEIYPEFAAAHSNLASILQQQGKLNDAILHYKEAIRIAP 496
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 182 INSKNRTASLVVLPPLVLGYDELYDENTEDAKDEGNKNIEANDK 225
+ ++RT L+ + PL+ L++E D D+G + A K
Sbjct: 12 VEPEHRTPDLMDIDPLIANLKALHEETRSDDDDDGQPSTSAKRK 55
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 188 TASLVVLPPLVLGYDELYDENTEDAKDEGNKNIEANDKIDIPVMNNNEED 237
TA +++LPP YDE+ D D D G ++ ++ I+ + +++++D
Sbjct: 113 TAQMILLPPEGSQYDEIVDHRGPDEDDFG--VLDDDENIEELIDDDDDDD 160
>AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical
protein Y46E12BL.2 protein.
Length = 1334
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 200 GYDELYD--ENTEDAKDEGNKNIEANDKIDIPVMNNNEED 237
GYD L D E+ ED +G K ++ N + +++++++D
Sbjct: 1202 GYDGLGDDDEDDEDGPTKGKKRVKENSDSEDEILSDDDDD 1241
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.132 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,968,231
Number of Sequences: 27539
Number of extensions: 137046
Number of successful extensions: 325
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 311
Number of HSP's gapped (non-prelim): 19
length of query: 243
length of database: 12,573,161
effective HSP length: 79
effective length of query: 164
effective length of database: 10,397,580
effective search space: 1705203120
effective search space used: 1705203120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
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