Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001841-TA|BGIBMGA001841-PA|IPR002018|Carboxylesterase,
type B
(559 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 51 4e-07
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 33 0.10
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 29 1.7
SPCC4G3.07c |phf1|swp1, saf50|PHD finger containing protein Phf1... 28 3.0
SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase Exg2|Schizosacch... 28 3.0
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 27 5.2
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 27 5.2
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 27 6.9
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 27 9.1
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 27 9.1
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 51.2 bits (117), Expect = 4e-07
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 46/273 (16%)
Query: 40 FYDIPYAGPTSGENRFKAP---SPPTNYSGVYHAVNRNILCAQP---NTRGLIGV----- 88
F I YA P G+ R++ P +YSG Y+ +C QP N + +
Sbjct: 21 FTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYNQFKT--ICPQPFYNNRKNQVRNPDFKY 78
Query: 89 -ENCLTLSIYTKNTTTPK---PVFVWLNAEQYASTTTPVFSYKKIVEENI---------V 135
E+CL L+I+ P PV +++ + P+ Y++ +++ +
Sbjct: 79 DEDCLFLNIWVPAGEKPAEGWPVLYFIHGG-WLQVGNPLH-YRQCDPQDLQADGSPAKFI 136
Query: 136 FVPLNFRLSIFGFIC----LGVPDAPGNAGLKDILQGLTWLKSNIAGFGGDPNNIVL--I 189
V RL++FGF+ L N G D GL W +I FGG+ NI + I
Sbjct: 137 LVSPGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAVGGI 196
Query: 190 GHGSGAALVDLL--TMSPRSKNLVHKAIALS-GSALSPWAVAYEPVRY---AEVFGGVLG 243
GS +AL L+ T P + ++ +A+ LS G ++ P +V +++ A+ FG +
Sbjct: 197 SAGSYSALFQLIYETYHPEANQIIKRALLLSNGLSVQPKSVEESQIQFNELAQKFG--IP 254
Query: 244 ITQKSREQLAKL----LQTTNPNVLATALEEFK 272
+ S E+L KL Q N+L L F+
Sbjct: 255 LELSSAEKLEKLRAIPFQDLADNILNLRLHTFR 287
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 33.1 bits (72), Expect = 0.10
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Query: 49 TSGENRFKAPSPPTNYSGVYHAVNRNILCAQPNTRGLIGVENCLTL----SIYTKNTTTP 104
T+G N F + + T +G++ + N + T GL G N T S++ K +TT
Sbjct: 522 TAGSNMFGSANSSTPGTGLFGSTQTNNATSNTGT-GLFGSNNANTTNTGGSLFNKPSTTT 580
Query: 105 KPVFVWLNAEQYASTTTPVFSYKKIVEENIVFVPLNFRLSIFGFICLGVPDAPGNAGL 162
+F A+Q ++TT+ +F N NF +FG G P A +
Sbjct: 581 GGLFGNTTAQQPSTTTSGLFGAS---NTNNQAQTSNFGTGLFGGSQAGQQQQPLQASI 635
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 146 FGFICLGV-----PDAPGNAGLKDILQGLTWLKSNIAGFGGDPNNIVLIGHGS-GAALVD 199
FG +C+ V P++ D + W+ SNI G +P +G S G V
Sbjct: 120 FGCVCVSVDYRLAPESKFPVAHNDAIDSFKWVASNIEKLGANPKRGFFLGGASAGGNFVS 179
Query: 200 LLTMSPRSKNL 210
+L+ R + +
Sbjct: 180 VLSHIARDEKI 190
>SPCC4G3.07c |phf1|swp1, saf50|PHD finger containing protein
Phf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 9 VSFTSAQDSLQVNTTEGTVEGSRAADGDYLTFYDIPYA 46
VSF S T G + SR D + + FYD+ A
Sbjct: 106 VSFNRLPKSASTKTKNGRIRSSRREDDNRIPFYDLDVA 143
>SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase
Exg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 420 LNSDWPFNQIPLHGVKHGGFLNYLFDYDLRPSDVQAMNS---LVR-RLTRFAHTGE 471
LN +P+ ++P+ GV GG+L+ + + PS Q N LV+ L+ A+ GE
Sbjct: 149 LNEPFPYGRLPIRGVNLGGWLS--MEPFITPSFFQVKNETAYLVKDELSLHAYLGE 202
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 27.5 bits (58), Expect = 5.2
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 5/128 (3%)
Query: 243 GITQKSREQLAKLLQTTNPNVLATALEEFKFTNNSLIFAPCIESQNSDPNETI--ITDAP 300
G K+ E + K+ + T E + + +S++SD T+
Sbjct: 284 GDDYKAVETIHKIARINGKTCTLTVEELYAIDRQEQEESDLDDSKSSDAKSVTQGTTNLI 343
Query: 301 LNILRSGNYNHVPYIAGFTTREGTLRASEVVFNRWLEGMEANFTN-FLPVDLDTNGNATA 359
+ LR N+ H+ G +R+ + + V+ + + G+ N FLP L+T GNA
Sbjct: 344 VEKLRKYNFEHIRQCFG--SRKLAISSILVILSWAVIGLAFPLYNAFLPYYLETRGNANE 401
Query: 360 VQDIKRFY 367
+ + Y
Sbjct: 402 PLSVAKTY 409
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 16 DSLQVNTTEGTVEGSRAADGDYLT 39
D+ QVN G V SRA D DY T
Sbjct: 79 DTKQVNGAGGQVNHSRAEDSDYAT 102
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 206 RSKNLVHKAIALSGSALSPWAVAYEPVR 233
R+K ++H+A+ L L P ++PVR
Sbjct: 117 RNKQMIHRAVILLVPGLEPSQFGFQPVR 144
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.6 bits (56), Expect = 9.1
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 126 YKKIVEENIVFVPLNFRLS--IFGFICLGVPDAPGNAGLKDILQGLTWLKSNIAGFGGDP 183
+ ++E + F +NFR++ I G + L G K+IL + LKS I
Sbjct: 166 FNSVIENS--FKDINFRVNQEIMGLVELQNHQQEGMVQQKEILSTIKQLKSEIFDINSFF 223
Query: 184 NNIVLIGHGSGAALVDLLTMSPRSKNLVHKAIALS 218
N + G +L++ L S+N AIALS
Sbjct: 224 ANFIEESAGYSNSLIEKLNEKFTSEN----AIALS 254
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 370 DRTIDMGTIEDYLEYQGDTLILLAVIRTARERGVTSTSPVRLLEFGYRGTLNSDWPFNQI 429
++ I + T++DY++Y D+ ILL ++ +A + S V E G + W +++
Sbjct: 202 EQGIQVSTLKDYVQYLPDSEILLDMV-SAIADAIASKEQV---ESGTKNVYELHWSMSRL 257
Query: 430 PL---HGVKHGGFLN 441
+G H G +N
Sbjct: 258 LACIKNGEVHKGLIN 272
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.137 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,659,495
Number of Sequences: 5004
Number of extensions: 119427
Number of successful extensions: 261
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 255
Number of HSP's gapped (non-prelim): 11
length of query: 559
length of database: 2,362,478
effective HSP length: 76
effective length of query: 483
effective length of database: 1,982,174
effective search space: 957390042
effective search space used: 957390042
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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