GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001840-TA|BGIBMGA001840-PA|IPR005055|Insect
pheromone-binding protein A10/OS-D
         (65 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7845| Best HMM Match : DUP (HMM E-Value=1.3)                        28   1.2  
SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)                 27   1.6  
SB_15440| Best HMM Match : ig (HMM E-Value=5.5e-06)                    27   1.6  
SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.)                25   6.5  
SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.6  
SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10)                 25   8.6  
SB_18154| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.6  

>SB_7845| Best HMM Match : DUP (HMM E-Value=1.3)
          Length = 374

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 26  RVIKHLIDSEPGYWDRLVDMYDPKRVY--TGKYEKELRTIK 64
           +V KH +D E G+   +V  Y+ KR Y  +  YE EL  ++
Sbjct: 237 KVKKHELDEEYGHLIHVVQFYEGKRAYKMSRLYECELNYLR 277


>SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)
          Length = 948

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 8   ALQTGCTKCTGAQRKGIRRVIKHLIDSEP 36
           +LQTG  KCT    +G    I HL+  EP
Sbjct: 103 SLQTGHYKCTVTNARGSNSRIVHLLVKEP 131


>SB_15440| Best HMM Match : ig (HMM E-Value=5.5e-06)
          Length = 501

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 8  ALQTGCTKCTGAQRKGIRRVIKHLIDSEP 36
          +LQTG  KCT    +G    I HL+  EP
Sbjct: 62 SLQTGHYKCTVTNARGSNSRIVHLLVKEP 90


>SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1046

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 28  IKHLIDSEPGYWDRLVDMYDPKRVYTGKYE 57
           ++HLID EPG   R VD+ D    +  K E
Sbjct: 181 LEHLIDIEPGVVIRGVDICDHFIAFRSKLE 210


>SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 477

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 16  CTGAQRKGIRRVIKHLIDSEPGYW 39
           C    R+GIR V++  I  E  YW
Sbjct: 448 CVRVLREGIRTVLRTQIPPEHAYW 471


>SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10)
          Length = 508

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 11  TGCTKCTGAQRKGIRRVIKHLIDSEPGYWD 40
           T C++CT  Q    R  I H   S  G+ D
Sbjct: 476 TRCSRCTNIQALAFRPTIIHQYSSTLGFLD 505


>SB_18154| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 307

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 11  TGCTKCTGAQRKGIRRVIKHLIDSEPGYWD 40
           T C++CT  Q    R  I H   S  G+ D
Sbjct: 208 TRCSRCTNIQALAFRPTIIHQYSSTLGFLD 237


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.321    0.137    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,305,096
Number of Sequences: 59808
Number of extensions: 71386
Number of successful extensions: 173
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 166
Number of HSP's gapped (non-prelim): 7
length of query: 65
length of database: 16,821,457
effective HSP length: 44
effective length of query: 21
effective length of database: 14,189,905
effective search space: 297988005
effective search space used: 297988005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)