GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001840-TA|BGIBMGA001840-PA|IPR005055|Insect
pheromone-binding protein A10/OS-D
         (65 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016995-1|AAH16995.1|  339|Homo sapiens GNAI2 protein protein.        29   3.1  
X84740-1|CAA59230.1|  922|Homo sapiens DNA ligase III protein.         27   7.2  
U40671-1|AAA85022.1|  862|Homo sapiens DNA ligase III protein.         27   7.2  
BC068005-1|AAH68005.1| 1009|Homo sapiens ligase III, DNA, ATP-de...    27   7.2  
AF491645-1|AAL91592.1|  862|Homo sapiens ligase III, DNA, ATP-de...    27   7.2  

>BC016995-1|AAH16995.1|  339|Homo sapiens GNAI2 protein protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 13 CTKCTGAQRKGIRRVIKHL-IDSEPGYWDRLVDMYDPKRVYTGKYEKELRTIKA 65
          CT CTGA   G   ++K + I  E GY +     Y    VY+   +  +  +KA
Sbjct: 19 CTSCTGAGESGKSTIVKQMKIIHEDGYSEEECRQYRAV-VYSNTIQSIMAIVKA 71


>X84740-1|CAA59230.1|  922|Homo sapiens DNA ligase III protein.
          Length = 922

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 8   ALQTGCTKCTGAQRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGKYEKELRTI 63
           ALQ   ++CT    K I R+IKH +    G    ++D  DP      K  + L+ +
Sbjct: 309 ALQDIASRCTANDLKCIIRLIKHDLKMNSGA-KHVLDALDPNAYEAFKASRNLQDV 363


>U40671-1|AAA85022.1|  862|Homo sapiens DNA ligase III protein.
          Length = 862

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 8   ALQTGCTKCTGAQRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGKYEKELRTI 63
           ALQ   ++CT    K I R+IKH +    G    ++D  DP      K  + L+ +
Sbjct: 309 ALQDIASRCTANDLKCIIRLIKHDLKMNSGA-KHVLDALDPNAYEAFKASRNLQDV 363


>BC068005-1|AAH68005.1| 1009|Homo sapiens ligase III, DNA,
           ATP-dependent protein.
          Length = 1009

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 8   ALQTGCTKCTGAQRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGKYEKELRTI 63
           ALQ   ++CT    K I R+IKH +    G    ++D  DP      K  + L+ +
Sbjct: 396 ALQDIASRCTANDLKCIIRLIKHDLKMNSGA-KHVLDALDPNAYEAFKASRNLQDV 450


>AF491645-1|AAL91592.1|  862|Homo sapiens ligase III, DNA,
           ATP-dependent protein.
          Length = 862

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 8   ALQTGCTKCTGAQRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGKYEKELRTI 63
           ALQ   ++CT    K I R+IKH +    G    ++D  DP      K  + L+ +
Sbjct: 309 ALQDIASRCTANDLKCIIRLIKHDLKMNSGA-KHVLDALDPNAYEAFKASRNLQDV 363


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.137    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,446,831
Number of Sequences: 224733
Number of extensions: 288353
Number of successful extensions: 416
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 416
Number of HSP's gapped (non-prelim): 5
length of query: 65
length of database: 73,234,838
effective HSP length: 44
effective length of query: 21
effective length of database: 63,346,586
effective search space: 1330278306
effective search space used: 1330278306
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)