GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001840-TA|BGIBMGA001840-PA|IPR005055|Insect
pheromone-binding protein A10/OS-D
         (65 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21321-1|AAG00051.1|  507|Caenorhabditis elegans Fizzy (cdc20 pr...    31   0.13 
AC024750-3|AAF60440.1|  384|Caenorhabditis elegans Hypothetical ...    27   1.6  
Z81077-9|CAD56582.1|  565|Caenorhabditis elegans Hypothetical pr...    25   6.6  
Z81077-8|CAB03072.2|  528|Caenorhabditis elegans Hypothetical pr...    25   6.6  
AF026206-4|AAK39309.1|  535|Caenorhabditis elegans Hypothetical ...    25   6.6  
Z82069-2|CAB04904.1|  315|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    25   8.7  
AC024750-2|AAF60439.1|  234|Caenorhabditis elegans Hypothetical ...    25   8.7  

>U21321-1|AAG00051.1|  507|Caenorhabditis elegans Fizzy (cdc20
           protein family) homologprotein 1 protein.
          Length = 507

 Score = 30.7 bits (66), Expect = 0.13
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 37  GYWDRLVDMYDPKRVYTGKYEKELRTIK 64
           GY    V +YDP R  T +Y +ELRT++
Sbjct: 239 GYASGAVKIYDPNRPKTTEYVRELRTLR 266


>AC024750-3|AAF60440.1|  384|Caenorhabditis elegans Hypothetical
           protein Y17G9A.4 protein.
          Length = 384

 Score = 27.1 bits (57), Expect = 1.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 36  PGYWDRLVDMYDPKRVYTGKYEKE 59
           PG+WD + ++Y   +  TGK+  +
Sbjct: 212 PGWWDSIDEVYPDSKKQTGKHSSQ 235



 Score = 24.6 bits (51), Expect = 8.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query: 36  PGYWDRLVDMYDPKRVYTGK 55
           PG+W++ +++Y   +  TGK
Sbjct: 356 PGWWNKCLEVYPDSKKKTGK 375


>Z81077-9|CAD56582.1|  565|Caenorhabditis elegans Hypothetical
           protein F36A2.9b protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 6.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 5   ITDALQTGCTKCTGAQRKGIRRVIKHL 31
           IT   +  C++C G     IR+ I+HL
Sbjct: 261 ITIGTEELCSRCEGPSYDNIRKAIEHL 287


>Z81077-8|CAB03072.2|  528|Caenorhabditis elegans Hypothetical
           protein F36A2.9a protein.
          Length = 528

 Score = 25.0 bits (52), Expect = 6.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 5   ITDALQTGCTKCTGAQRKGIRRVIKHL 31
           IT   +  C++C G     IR+ I+HL
Sbjct: 261 ITIGTEELCSRCEGPSYDNIRKAIEHL 287


>AF026206-4|AAK39309.1|  535|Caenorhabditis elegans Hypothetical
          protein T28B4.1a protein.
          Length = 535

 Score = 25.0 bits (52), Expect = 6.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 25 RRVIKHLIDSEPGYWDRLVDMYD 47
          RRV  H ++SEP Y D   DM D
Sbjct: 9  RRVTMHDVNSEPDYDDMDPDMKD 31


>Z82069-2|CAB04904.1|  315|Caenorhabditis elegans Hypothetical
           protein W04A8.3 protein.
          Length = 315

 Score = 24.6 bits (51), Expect = 8.7
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 28  IKHLIDSEPGYWDRLVDMYDPKRVYTGKYEKE-LRTIK 64
           +K  ID +P Y +   D  + + +Y G Y K+ L T+K
Sbjct: 63  VKVNIDVQPDYIEVFDDFSEKRVLYRGNYMKQALGTVK 100


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
            F54E4.1 protein.
          Length = 2948

 Score = 24.6 bits (51), Expect = 8.7
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 5    ITDALQTGCTKCTGAQRKGIRRVIKHLIDSEP 36
            + DA+QT C+KC   Q   +  V+  + +S+P
Sbjct: 1731 LKDAVQTLCSKCNDVQ---LALVVVRMYESDP 1759


>AC024750-2|AAF60439.1|  234|Caenorhabditis elegans Hypothetical
           protein Y17G9A.3 protein.
          Length = 234

 Score = 24.6 bits (51), Expect = 8.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query: 36  PGYWDRLVDMYDPKRVYTGK 55
           PG+W++ +++Y   +  TGK
Sbjct: 206 PGWWNKCLEVYPDTKKLTGK 225


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.321    0.137    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,632,725
Number of Sequences: 27539
Number of extensions: 51593
Number of successful extensions: 104
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 97
Number of HSP's gapped (non-prelim): 9
length of query: 65
length of database: 12,573,161
effective HSP length: 45
effective length of query: 20
effective length of database: 11,333,906
effective search space: 226678120
effective search space used: 226678120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)