GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001840-TA|BGIBMGA001840-PA|IPR005055|Insect
pheromone-binding protein A10/OS-D
         (65 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60570.1 68418.m07594 kelch repeat-containing F-box family pr...    27   1.2  
At3g44910.1 68416.m04838 cation/hydrogen exchanger, putative (CH...    27   1.5  
At5g37390.1 68418.m04498 hypothetical protein contains Pfam prof...    25   8.3  
At5g37240.1 68418.m04474 hypothetical protein                          25   8.3  
At5g33220.1 68418.m03924 hypothetical protein contains Pfam prof...    25   8.3  
At4g09370.1 68417.m01546 hypothetical protein contains Pfam prof...    25   8.3  
At3g47330.1 68416.m05144 hypothetical protein contains Pfam prof...    25   8.3  
At2g23710.1 68415.m02831 hypothetical protein contains Pfam prof...    25   8.3  
At1g23930.1 68414.m03019 hypothetical protein contains Pfam prof...    25   8.3  

>At5g60570.1 68418.m07594 kelch repeat-containing F-box family
           protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646
           F-box domain
          Length = 393

 Score = 27.5 bits (58), Expect = 1.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 31  LIDSEPGYWDRLVDMYDPKRVYTG 54
           L DS  G W+ L +M+ P+R+ +G
Sbjct: 210 LYDSSSGRWEMLPNMHSPRRLCSG 233


>At3g44910.1 68416.m04838 cation/hydrogen exchanger, putative
           (CHX12) monovalent cation:proton antiporter family 2
           (CPA2) member, PMID:11500563
          Length = 705

 Score = 27.1 bits (57), Expect = 1.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 42  LVDMYDPKRVYTGKYEKELRTIK 64
           L  +YDPKR Y G  +K +  +K
Sbjct: 374 LAGLYDPKRKYVGYQKKNIMNLK 396


>At5g37390.1 68418.m04498 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 628

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 20  QRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGK 55
           +RK + RV++  +D   GY D +VD +  + +   K
Sbjct: 439 ERKMLSRVVEKHVDDGIGYIDPIVDSWRERLIVEKK 474


>At5g37240.1 68418.m04474 hypothetical protein
          Length = 196

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 15  KCTGAQRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGKYEKEL 60
           K T A  + ++ ++ +L+     +  +LV +  P     G+YE+E+
Sbjct: 67  KGTAAPNRVVKTIVSNLLKGFKSHPSKLVSIDVPNSQPPGQYEEEI 112


>At5g33220.1 68418.m03924 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 587

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 20  QRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGK 55
           +RK + RV++  +D   GY D +VD +  + +   K
Sbjct: 468 ERKMLSRVVEKHVDDGIGYIDPIVDSWRERLIVEKK 503


>At4g09370.1 68417.m01546 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 666

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 20  QRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGK 55
           +RK + RV++  +D   GY D +VD +  + +   K
Sbjct: 439 ERKMLSRVVEKHVDDGIGYIDPIVDSWRERLIVEKK 474


>At3g47330.1 68416.m05144 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 664

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 20  QRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGK 55
           +RK + RV++  +D   GY D +VD +  + +   K
Sbjct: 439 ERKMLSRVVEKHVDDGIGYIDPIVDSWRERLIVEKK 474


>At2g23710.1 68415.m02831 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287;
            this may be a pseudogene;  the protein appears slightly
           truncated on the 3' end due to intervening stop codon.
          Length = 592

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 20  QRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGK 55
           +RK + RV++  +D   GY D +VD +  + +   K
Sbjct: 439 ERKMLSRVVEKHVDDGIGYIDPIVDSWRERLIVEKK 474


>At1g23930.1 68414.m03019 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 649

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 20  QRKGIRRVIKHLIDSEPGYWDRLVDMYDPKRVYTGK 55
           +RK + RV++  +D   GY D +VD +  + +   K
Sbjct: 420 ERKMLSRVVEKHVDDGIGYIDPIVDSWRERLIVEKK 455


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.321    0.137    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,553,612
Number of Sequences: 28952
Number of extensions: 50012
Number of successful extensions: 126
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117
Number of HSP's gapped (non-prelim): 9
length of query: 65
length of database: 12,070,560
effective HSP length: 45
effective length of query: 20
effective length of database: 10,767,720
effective search space: 215354400
effective search space used: 215354400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)