Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001839-TA|BGIBMGA001839-PA|undefined
(156 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 39 0.001
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 35 0.029
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 34 0.050
At5g62770.1 68418.m07880 expressed protein 33 0.066
At1g65280.1 68414.m07402 DNAJ heat shock N-terminal domain-conta... 33 0.066
At3g48120.1 68416.m05248 expressed protein 32 0.15
At3g28560.1 68416.m03566 hypothetical protein similar to mitocho... 32 0.15
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont... 32 0.20
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 31 0.27
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 31 0.27
At5g44290.1 68418.m05421 protein kinase family protein contains ... 31 0.47
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 31 0.47
At1g70950.1 68414.m08185 expressed protein 31 0.47
At5g16680.1 68418.m01951 PHD finger family protein contains Pfam... 30 0.62
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 30 0.62
At2g33300.1 68415.m04081 hypothetical protein 30 0.82
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 29 1.1
At4g35940.1 68417.m05113 expressed protein 29 1.1
At3g25840.1 68416.m03219 protein kinase family protein contains ... 29 1.1
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 29 1.1
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 29 1.1
At3g28770.1 68416.m03591 expressed protein 29 1.4
At3g19610.1 68416.m02486 hypothetical protein 29 1.4
At3g16810.1 68416.m02147 pumilio/Puf RNA-binding domain-containi... 29 1.4
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 29 1.4
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 29 1.4
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 29 1.9
At5g18000.1 68418.m02111 transcriptional factor B3 family protei... 29 1.9
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 29 1.9
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 29 1.9
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 29 1.9
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 29 1.9
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 29 1.9
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 29 1.9
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 29 1.9
At1g67230.1 68414.m07652 expressed protein 29 1.9
At1g15660.1 68414.m01880 expressed protein similar to CENPCA pro... 29 1.9
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 28 2.5
At5g10490.1 68418.m01215 mechanosensitive ion channel domain-con... 28 2.5
At4g17150.1 68417.m02581 expressed protein 28 2.5
At4g16563.1 68417.m02506 aspartyl protease family protein contai... 28 2.5
At3g55510.1 68416.m06164 expressed protein 28 2.5
At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70 (... 28 2.5
At3g17609.2 68416.m02248 bZIP transcription factor family protei... 28 2.5
At3g09210.1 68416.m01095 KOW domain-containing transcription fac... 28 2.5
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 28 2.5
At5g53800.1 68418.m06685 expressed protein 28 3.3
At4g39160.1 68417.m05546 myb family transcription factor contain... 28 3.3
At4g28230.1 68417.m04045 expressed protein 28 3.3
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 28 3.3
At1g74480.1 68414.m08628 RWP-RK domain-containing protein contai... 28 3.3
At5g24670.1 68418.m02916 cytidine/deoxycytidylate deaminase fami... 27 4.4
At4g10200.1 68417.m01672 hAT dimerisation domain-containing prot... 27 4.4
At4g01120.1 68417.m00150 G-box binding factor 2 (GBF2) identical... 27 4.4
At1g56660.1 68414.m06516 expressed protein 27 4.4
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 27 5.8
At5g41320.1 68418.m05022 expressed protein 27 5.8
At3g52220.1 68416.m05737 expressed protein 27 5.8
At3g11890.2 68416.m01458 expressed protein 27 5.8
At3g10820.1 68416.m01303 transcription elongation factor-related... 27 5.8
At1g62010.1 68414.m06994 mitochondrial transcription termination... 27 5.8
At1g49890.1 68414.m05593 expressed protein contains Pfam domain,... 27 5.8
At1g23300.1 68414.m02914 MATE efflux family protein similar to r... 27 5.8
At5g58040.1 68418.m07263 fip1 motif-containing protein contains ... 27 7.6
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 27 7.6
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 27 7.6
At1g48290.1 68414.m05394 expressed protein ; expression supporte... 27 7.6
At1g09320.1 68414.m01043 agenet domain-containing protein contai... 27 7.6
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 70 KEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRD 121
K+ K D+K R+ EK ++ ++NK++R E RR K++ K R D
Sbjct: 1096 KKKKATDQKKRKEYEAEKAKNEEINKKRRREERRDRYREEDKQKKKTRRSLD 1147
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 34.7 bits (76), Expect = 0.029
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 2 GMGDESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRA 61
G G+E+ KEA +T KK+ + + S+ + + E S S + +
Sbjct: 744 GEGEETQKEANEST-KKERKRKKSESKKQSDGEEETQKEPSESTKKERKRKNPESKKKAE 802
Query: 62 DVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRD 121
V + +KE +K R+R +P+ N+ ++ E ++ +K+R ++K++
Sbjct: 803 AVEEEETRKESVESTKKERKRKKPKHDEEEVPNETEKPEKKK------KKKREGKSKKKE 856
Query: 122 LET 124
ET
Sbjct: 857 TET 859
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 33.9 bits (74), Expect = 0.050
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Query: 10 EAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVPKPIGK 69
E ++ +D E + D R +N + G + G D R R + +
Sbjct: 94 ERRKSSDSEDDVEEEDERDKRRVNEKERGHR------EHERDRGKDRKRDREREERKDKE 147
Query: 70 KEM-KTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRD 121
+E K +R+ R R EK R + +R+R + R R ++R + R+R+
Sbjct: 148 REREKDRERREREREEREKERVKERERREREDGERDRREREKERGSRRNRERE 200
Score = 30.7 bits (66), Expect = 0.47
Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 4/120 (3%)
Query: 5 DESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVP 64
D + E +K+ + E D + + S S D RV
Sbjct: 62 DYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNE--- 118
Query: 65 KPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRV-QKRRPKVTRKRDLE 123
K G +E + K R+R R + R K +R++ RR+ +K R K +R+ E
Sbjct: 119 KERGHREHERDRGKDRKRDREREERKDKEREREKDRERREREREEREKERVKERERRERE 178
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 55 DMARVRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRP 114
D+ R R + + K+ K+V R SR P++ ++K +TR + + QK+
Sbjct: 217 DLKRRRKEGGERKEKEREKSVGRSSRHEDSPKRKSVEDNGEKKEKKTREEELEDEQKKLD 276
Query: 115 KVTRKR 120
+ KR
Sbjct: 277 EEVEKR 282
>At5g62770.1 68418.m07880 expressed protein
Length = 268
Score = 33.5 bits (73), Expect = 0.066
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 9 KEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVPKPIG 68
K + N+ D Q +S +I + G W L + V + P P+
Sbjct: 149 KPKQSNSGDDDLQRLSSSPSHSKIKSHSAGFSKRWKLRNLLYVRSSSEGNDKLVFPAPVK 208
Query: 69 KKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQ 104
K + D+ R P G+ R+R ET+RQ
Sbjct: 209 KNDETVSDQ--REEEEPPSKVDGEEEGREREETKRQ 242
>At1g65280.1 68414.m07402 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 598
Score = 33.5 bits (73), Expect = 0.066
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 77 RKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRP----KVTRKRDLETLIVSAAHG 132
+K RR+S + K KR++ R+++ + +KRR K T+KR+ E+ S +
Sbjct: 42 QKERRKSDGGSYEREKRRKREKERKRKKIERKERKRRDMKKKKKTKKREYESDTESYSGS 101
Query: 133 AEALEREKNP--ILKHSLLVF 151
++E +P ++K LL F
Sbjct: 102 DSFSDQEDDPETVVKEMLLEF 122
>At3g48120.1 68416.m05248 expressed protein
Length = 328
Score = 32.3 bits (70), Expect = 0.15
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 77 RKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKR-RPKVTRKRDLETLIVSAAHGAEA 135
R+SR RS ++R+G R+RS R L R ++R R V K+ + ++ A
Sbjct: 131 RRSRSRSAERRNRYGDRESRRRSNRSRSLSPRRERRSREDVKEKKPDYSRLIKGYDEMSA 190
Query: 136 LEREK 140
E+ K
Sbjct: 191 AEKVK 195
>At3g28560.1 68416.m03566 hypothetical protein similar to
mitochondrial protein-like protein (GI:11559424)
[Cucumis sativus]
Length = 257
Score = 32.3 bits (70), Expect = 0.15
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 30 REINPNDPGSE-CSWSL-TSYSGVSGLDMARVRADVPKPIGKKEMKTVDRKSRRRSRPEK 87
R++ N+ E SW L T++S VS A + P K K +K RRR R
Sbjct: 172 RKLYTNNSSHEWISWRLGTNWSNVSFDHPATLETFAMDPEKNKAEKEAWKK-RRRKRGRL 230
Query: 88 HRHGKVNKRKRSETRRQLVHRVQKRR 113
R + K++R RR+ R+Q+RR
Sbjct: 231 LRKKRRTKQRRKLGRRRRKQRMQRRR 256
>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
contains Pfam domain PF00098: Zinc knuckle; identical to
cDNA CAX-interacting protein 4 GI:27651998
Length = 332
Score = 31.9 bits (69), Expect = 0.20
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 10 EAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVPKPIGK 69
E E +S+++ ++E+SD D + +E S V R +
Sbjct: 132 EVEEVSSEEEEESESSDSDV-DSEMERIIAERFGKKKGGSSVKKTSSVRKKKKRVSDESD 190
Query: 70 KEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRD 121
+ + DRK RRRS ++ H +R SE+ + R ++R+ + RKRD
Sbjct: 191 SDSDSGDRKRRRRSMKKRSSH---KRRSLSESEDEEEGRSKRRKERRGRKRD 239
Score = 27.1 bits (57), Expect = 5.8
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 10/123 (8%)
Query: 3 MGDESNKEAEPNTSKKD--SQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVR 60
+ DES+ +++ K+ S + S H R ++ ++ E G
Sbjct: 185 VSDESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKER--RGRKRDEDD 242
Query: 61 ADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKR 120
+D + + +K RK +RR R ++ + + RR QKRR KV
Sbjct: 243 SDESEDEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDRR------QKRRNKVAASS 296
Query: 121 DLE 123
D E
Sbjct: 297 DSE 299
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 31.5 bits (68), Expect = 0.27
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 6 ESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVPK 65
E + + + + KK+ +++ S R+ SE S S + S D + +D+
Sbjct: 174 EYSGDKKKSDGKKNGKHKKSLRVRRKKRRRHSSSESESSSDSETDSSESD-SESDSDLSS 232
Query: 66 PIGKKEMKTVDRKSRRRS-RPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLET 124
P +K R+RS + +KHR K + KR E +R + + +RPK +R ++
Sbjct: 233 PSFLSSSSHERQKKRKRSSKKDKHRRSK-QRDKRHEKKRSM----RDKRPKRKSRRSPDS 287
Query: 125 LIVSAAHGAEA 135
L S + G+EA
Sbjct: 288 LEDSNS-GSEA 297
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 55 DMARVRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSE--TRRQLVHRVQKR 112
+MA+ R + + ++E++ R+ + R R E+ + +RKR E +R+ R +K
Sbjct: 528 EMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKE 587
Query: 113 RPKVTRK 119
R +V RK
Sbjct: 588 REEVERK 594
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/72 (19%), Positives = 34/72 (47%)
Query: 69 KKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLETLIVS 128
++E K + +++RR K R + + ++ E R+ + K+R + ++++ E +
Sbjct: 489 EEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERK 548
Query: 129 AAHGAEALEREK 140
E RE+
Sbjct: 549 RREEQERKRREE 560
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 69 KKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQ-KRRPKVTRKRDLE 123
+KE + V+RK R E+ R ++ KR+ E +++ ++ K+R + RKR+ E
Sbjct: 585 RKEREEVERKIREEQ--ERKREEEMAKRREQERQKKEREEMERKKREEEARKREEE 638
Score = 28.7 bits (61), Expect = 1.9
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 55 DMARVRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRP 114
+MA+ R + ++EM+ R+ R R E+ K+ + +R R+ V R ++R
Sbjct: 606 EMAKRREQERQKKEREEMERKKREEEARKREEE--MAKIREEERQRKEREDVER-KRREE 662
Query: 115 KVTRKRDLETLIVSAAHGAEALEREK 140
+ R+ + AA AE R+K
Sbjct: 663 EAMRREEERKREEEAAKRAEEERRKK 688
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 76 DRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLE 123
+RK R E+ R + RKR E +R+ ++R + T ++ E
Sbjct: 434 ERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKRE 481
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/120 (18%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 5 DESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVP 64
+E K E +++ + + + + + + E + R +
Sbjct: 489 EEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVE-R 547
Query: 65 KPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKR-RPKVTRKRDLE 123
K ++E K + ++R+R E+ R ++ KR+ E +R+ V+++ R + RKR+ E
Sbjct: 548 KRREEQERKRREEEARKREE-ERKREEEMAKRREQERQRKEREEVERKIREEQERKREEE 606
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/48 (22%), Positives = 25/48 (52%)
Query: 76 DRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLE 123
+ ++R+R ++ + +R+ ET R+ + R+ + RKR+ E
Sbjct: 450 EEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEE 497
Score = 26.6 bits (56), Expect = 7.6
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 55 DMARVRADVPKPIGKKEMKTVDRKSRRRS--RPEKHRHGKVNKRKRS-ETRRQLVHRVQK 111
+MA++R + + +KE + V+RK R R E+ R + KR+ E RR+ +K
Sbjct: 638 EMAKIREEERQ---RKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKEEEEEK 694
Query: 112 RR 113
RR
Sbjct: 695 RR 696
>At5g44290.1 68418.m05421 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 644
Score = 30.7 bits (66), Expect = 0.47
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 61 ADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVT 117
+ +PK KE+ R +R RP + +H + + + R R+L+ V+ P ++
Sbjct: 431 SSLPKYPPSKEIDAKIRDDAKRQRPTQEKHERQDSQTRRSHERKLIPPVKANNPSLS 487
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 30.7 bits (66), Expect = 0.47
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 47 SYSGVSGLDMARVRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLV 106
+Y+ + + A +P KK+ K +K +PE+ + K+K++E + V
Sbjct: 435 TYNTAADSLLGETSAKSEEPSKKKDKKK--KKKVEEEKPEEEEPSEKKKKKKAEAETEAV 492
Query: 107 HRV---QKRRPKVTRKRDLETLIVSAAHGAEALEREK 140
V +K++ K RK + E + A + E++K
Sbjct: 493 VEVAKEEKKKNKKKRKHEEEETTETPAKKKDKKEKKK 529
>At1g70950.1 68414.m08185 expressed protein
Length = 478
Score = 30.7 bits (66), Expect = 0.47
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Query: 5 DESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVP 64
+E+ + + + SKK S + + + + P P ++ + S G A R
Sbjct: 206 EEAGSKLDEHASKKPSNSMETPSSSVNVKPIIP-NDVRVTKASTKGHDVTPKAASRRTKG 264
Query: 65 KPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETR 102
+ VD KS++ RP+K + ++ETR
Sbjct: 265 SSLSSNSKTNVDAKSQKELRPKKTIESQPKSSNKTETR 302
>At5g16680.1 68418.m01951 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1290
Score = 30.3 bits (65), Expect = 0.62
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 2 GMGDESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRA 61
G+ + + + +T++K S +E S + P + C+ G L R+
Sbjct: 559 GLQSDGKRGGDISTNEKCSASEQSSSQA-DCKDELPSTSCTGEGMPNHGTVALQDGLPRS 617
Query: 62 DVPKPIGKKEMKTVDRKSR 80
VP+ +GKK + ++ R
Sbjct: 618 RVPREVGKKSKEAFSKRQR 636
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 30.3 bits (65), Expect = 0.62
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 81 RRSRPEKHRHG--KVNKRKRSE----TRRQLVHRVQKRRPKVTRKRDLE 123
+R R E+ RHG V K+ R E ++QL V+KRR +V ++L+
Sbjct: 127 KRKRTERSRHGDDDVEKKTRDEQVEDEQKQLAEEVEKRRRRVQEWQELK 175
>At2g33300.1 68415.m04081 hypothetical protein
Length = 265
Score = 29.9 bits (64), Expect = 0.82
Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 1/130 (0%)
Query: 17 KKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVPKPIGKKEMKTVD 76
KK + H+T E+ D + ++ S +VR + KP + ++
Sbjct: 36 KKREHQSSHAHETGEVKQIDEQNHVPEKVSMKSVRDNSTCYKVRLTLQKPDVVQVSSNLN 95
Query: 77 RKSRRRSRPEKHRHGKVNKR-KRSETRRQLVHRVQKRRPKVTRKRDLETLIVSAAHGAEA 135
+ +RSR H GK + K+ + R + + K L S HG
Sbjct: 96 KTEDQRSRAANHETGKTKQNLKKPGDYKSFAARTIQVKKKSALPMKLSKNPRSGEHGPPV 155
Query: 136 LEREKNPILK 145
+ P+LK
Sbjct: 156 NASKGCPVLK 165
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 69 KKEMKTVDRKSR--RRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLETLI 126
K+ K V+R+ R EK RH K +R+R R +L ++ R K+ R+++ E
Sbjct: 116 KENDKGVEREHEGDRNRAKEKDRHEKQKERERE--REKLEREKEREREKIEREKEREREK 173
Query: 127 VSAAHGAEALEREKN 141
+ E EREK+
Sbjct: 174 ME----REIFEREKD 184
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 69 KKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLETLIVS 128
+KE + K R E+ + + +R+R + R++ R +K R K+ ++R++E
Sbjct: 142 QKEREREREKLEREKEREREKIEREKEREREKMEREIFER-EKDRLKLEKEREIE----- 195
Query: 129 AAHGAEALEREKN 141
E +EREK+
Sbjct: 196 REREREKIEREKS 208
>At4g35940.1 68417.m05113 expressed protein
Length = 451
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 69 KKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLETLIVS 128
KKE + DR+S ++ + +K + ++K + + + V + R+R + V
Sbjct: 35 KKEQRRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKEDGAKVD 94
Query: 129 AAHGAEALEREKNPILKHSLLVFR 152
H + E E N + K SL V R
Sbjct: 95 LFH--KLKESEVNCLEKSSLTVER 116
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 59 VRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTR 118
+ +D + K+ +++DR RR+ R + + N+R RS R + R +KR +
Sbjct: 298 IESDRERRKEKERERSIDR-DRRKEREGDYLRDRANERGRSRDRTRYNSRERKREKEREG 356
Query: 119 KRDLE 123
++D E
Sbjct: 357 EKDWE 361
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 49 SGVSGLDMARVRADVPKPIGKKEMKTVDRKSRRR----SRPEKHRHGKVNKRKRSETR 102
SG +++R+R D KK + R RRR S P KV +R RS +R
Sbjct: 603 SGQEDSELSRLRRDSSSRGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTRSRSR 660
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 29.5 bits (63), Expect = 1.1
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 77 RKSRRRSRPEKHRHGKVNKRKRSET-RRQLVHRVQKRRPKVTRKRDLETLIVSAAHGAEA 135
RKSR S P +HR V ++RS T +R + + P ++ TL + E
Sbjct: 4 RKSRSIS-PRRHRSRSVTPKRRSPTPKRYKRQKSRSSTPSPAKRSPAATLESAKNRNGEK 62
Query: 136 LEREK 140
L+RE+
Sbjct: 63 LKREE 67
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.1 bits (62), Expect = 1.4
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Query: 5 DESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVP 64
+E KE N KK N+ + + + S S + + +
Sbjct: 960 EEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASK-NREKKEYEEK 1018
Query: 65 KPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLE 123
K K+E K +KS+ + R EK + +K+++ E+R + +K+ + K++ E
Sbjct: 1019 KSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDL---KAKKKEEETKEKKESE 1074
>At3g19610.1 68416.m02486 hypothetical protein
Length = 612
Score = 29.1 bits (62), Expect = 1.4
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 20 SQNENSDHDTREINPNDPGSECSWSLT--SYSGVSGLDMARV-RADV---PKPIGKKEMK 73
S +N DHDT+ ++ S S SL+ SY G+ +R R DV P P K +
Sbjct: 216 SMIKNHDHDTKHVSRARSSSATSPSLSIRSYGGIEEKSSSRTRRRDVVVSPSPRWSKSLS 275
Query: 74 TVDR--KSRRRSRPEKHRHGKVN--KRKRSETRRQLV 106
R KS+ P+ + + RKRS T +++
Sbjct: 276 YGSRSNKSKNLLPPKSNTFESSDPISRKRSWTETEIL 312
>At3g16810.1 68416.m02147 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 641
Score = 29.1 bits (62), Expect = 1.4
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 64 PKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRK-RSETRRQLVHRVQKRRPKVTRKRDL 122
PK G KE T K RR + ++ + KRK ++LV +K R + K D
Sbjct: 49 PKSAGDKEQSTNLSKKERRVQAKELTEARKKKRKPHYNLEQELVSLWEKMRRRNIGKEDR 108
Query: 123 ETLIVSA 129
LI A
Sbjct: 109 SKLISEA 115
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 76 DRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKV 116
+RKSRR E + K KR+ ++T R L V+KR +V
Sbjct: 197 NRKSRRMMEEENKKSRKKAKREYNDTVRGLAEFVKKRDKRV 237
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 69 KKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKR-RPKVTRKR 120
++ + DR+ R R R + +R RSE R + HR + R R + KR
Sbjct: 135 RRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKR 187
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 2 GMGDESNKEAEPNTSKK--DSQNENSDHDTREINPND 36
G G+ + E K+ DSQNE+ DHD EI D
Sbjct: 476 GSGNLTELEVVEEQEKRAIDSQNEDEDHDEEEIELED 512
>At5g18000.1 68418.m02111 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 307
Score = 28.7 bits (61), Expect = 1.9
Identities = 23/115 (20%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 38 GSECSWSLTSYSGVSGLDMARVRADVPKPIGKKE-MKTVDRKSRRRSRPEKHRHGKVNKR 96
G+E + + SG + R + K + K+E +++ S + + G++ ++
Sbjct: 116 GTEMLRPRKTITSSSGRNKREERKSIYKDVKKEEEIESWSESSHPCHKTAESTSGRLTQK 175
Query: 97 KRSETRRQLVHRVQKRRPKVTRKRDLETLIVSAAHGAEALEREKNPILKHSLLVF 151
+ R++ + +K K ++K+ +ET+ + G +L E +K S L+F
Sbjct: 176 QELNLRKKEADKTEKS--KTSKKKKVETVSNDSEAGTSSLIPEFKLTIKKSHLLF 228
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 2 GMGDESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLT 46
G D S+K+ +P K ++ + + D RE+ D G E S++
Sbjct: 612 GNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVS 656
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 2 GMGDESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLT 46
G D S+K+ +P K ++ + + D RE+ D G E S++
Sbjct: 610 GNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVS 654
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 2 GMGDESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLT 46
G D S+K+ +P K ++ + + D RE+ D G E S++
Sbjct: 612 GNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVS 656
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 2 GMGDESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLT 46
G D S+K+ +P K ++ + + D RE+ D G E S++
Sbjct: 612 GNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVS 656
>At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing
protein
Length = 561
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 69 KKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRK 119
KK+ + D RR R H + R+R R HR + R V ++
Sbjct: 48 KKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKE 98
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 76 DRKSRRRSRPEKHRHGKVNKRKRSETR-RQLVHRVQKRRPKVTRKRD 121
DR R RSR E+HR + K E + R+ R + RR +K D
Sbjct: 123 DRSRRSRSRSERHRSQEREKSLEIEPKERETKDRDRDRRRHKDKKED 169
Score = 27.5 bits (58), Expect = 4.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 62 DVPKPIGKKEMKTVDR-KSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKR 112
D K + K+E DR + R + R K R + ++ +RS +R + HR Q+R
Sbjct: 90 DREKDVDKEERNGKDRERDRDKDRDSKGRDHEKDRSRRSRSRSER-HRSQER 140
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 28.7 bits (61), Expect = 1.9
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 16/109 (14%)
Query: 10 EAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVPKPIGK 69
E + K DSQN++ D + ND L S V G++ + D P K
Sbjct: 728 ETKGGKEKGDSQNDSKDR----MKEND--------LKSAEKVKGVESNKKSTD---PHVK 772
Query: 70 KEMKTVDRKSRRRSRPEK-HRHGKVNKRKRSETRRQLVHRVQKRRPKVT 117
K+ + V+R R S+ ++ R K + +RS RR KRR T
Sbjct: 773 KDSRDVERPHRTNSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPT 821
Score = 28.7 bits (61), Expect = 1.9
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 9/97 (9%)
Query: 7 SNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVPKP 66
++KE +K+ + E S H E + D S S +R R+ P P
Sbjct: 785 NSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSP 844
Query: 67 IGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRR 103
+ R R+RS P +KRK S R+
Sbjct: 845 V---------RSRRKRSSPSSDESSDDSKRKSSSKRK 872
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 28.7 bits (61), Expect = 1.9
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 16/109 (14%)
Query: 10 EAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVPKPIGK 69
E + K DSQN++ D + ND L S V G++ + D P K
Sbjct: 698 ETKGGKEKGDSQNDSKDR----MKEND--------LKSAEKVKGVESNKKSTD---PHVK 742
Query: 70 KEMKTVDRKSRRRSRPEK-HRHGKVNKRKRSETRRQLVHRVQKRRPKVT 117
K+ + V+R R S+ ++ R K + +RS RR KRR T
Sbjct: 743 KDSRDVERPHRTNSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPT 791
Score = 28.7 bits (61), Expect = 1.9
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 9/97 (9%)
Query: 7 SNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVPKP 66
++KE +K+ + E S H E + D S S +R R+ P P
Sbjct: 755 NSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSP 814
Query: 67 IGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRR 103
+ R R+RS P +KRK S R+
Sbjct: 815 V---------RSRRKRSSPSSDESSDDSKRKSSSKRK 842
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 28.7 bits (61), Expect = 1.9
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 69 KKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLETLIVS 128
+KE + +D + + K+ + K +R + + +K+ +R+LETL V+
Sbjct: 522 EKEWEELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMERELETLEVA 581
Query: 129 AAHGAEALEREKNPILK 145
A AE +E E++ + K
Sbjct: 582 KASFAETMEYERSMLSK 598
>At1g15660.1 68414.m01880 expressed protein similar to CENPCA
protein (GI:11863170) {Zea mays}
Length = 705
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 68 GKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVH 107
G K+MKT+ +SR + K GK N+R+ + ++ L H
Sbjct: 579 GDKQMKTLPHESRAK----KQTKGKSNEREEKKPKKTLTH 614
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein
similar to SP|P05149 Aldose 1-epimerase precursor (EC
5.1.3.3) (Mutarotase) from Acinetobacter calcoaceticus;
contains Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 5 DESNKEAEPNTSKKDSQNENSDHD 28
D+ K+ E + KKD Q+EN D D
Sbjct: 69 DKKEKKKEHDVQKKDKQHENKDKD 92
>At5g10490.1 68418.m01215 mechanosensitive ion channel
domain-containing protein / MS ion channel
domain-containing protein contains Pfam profile PF00924:
Mechanosensitive ion channel
Length = 519
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 51 VSGLDMARVRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQ 110
++G D ++ + KP ++E K + KS+ S P+ + KV + S+T + V
Sbjct: 339 INGEDKSKSQNRAAKPTAEQENKGSNPKSKETSSPDLKANVKVGESPVSDTNKVPEETVA 398
Query: 111 KRRPKVTRK 119
K K K
Sbjct: 399 KPVIKAVSK 407
>At4g17150.1 68417.m02581 expressed protein
Length = 402
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 2 GMGDESNKEAEPNTSKK--DSQNENSDHDTRE 31
G GD+ K A+ NT +K DS E + D++E
Sbjct: 326 GEGDQVEKTADVNTERKPRDSSREEEEEDSKE 357
>At4g16563.1 68417.m02506 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 499
Score = 28.3 bits (60), Expect = 2.5
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 38 GSECSWSLTSYSGVSGLDMARVRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRK 97
G+ S+ L S+S D RVR P +G+ VD+K +R + H G K+K
Sbjct: 249 GNSFSYCLVSHS----FDSDRVRRPSPLILGR----FVDKKEKRVGTTDDHDDGDDEKKK 300
Query: 98 RSE 100
++E
Sbjct: 301 KNE 303
>At3g55510.1 68416.m06164 expressed protein
Length = 594
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/70 (18%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 65 KPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLET 124
+ KK +++V+++SR+ K + K N+R ++ +++ +V+++ K ++ + +
Sbjct: 9 RKFAKKNLQSVEKRSRKLKPFIKKKFAKRNERHQAGDKQE--KKVEQQPKKRCQEEEFQD 66
Query: 125 LIVSAAHGAE 134
+ + A G +
Sbjct: 67 IAIDAVFGKD 76
>At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70
(U1-70k)
Length = 427
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 53 GLDMARVRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKR 112
GL +RV + +G+++ + +S SRP + R K K E R+L H +
Sbjct: 230 GLGTSRVGGG-EEIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRE 288
Query: 113 RPKVTRKRD 121
R + + D
Sbjct: 289 RSRDRPRED 297
>At3g17609.2 68416.m02248 bZIP transcription factor family protein /
HY5-like protein (HYH) nearly identical to HY5-like
protein [Arabidopsis thaliana] GI:18042111; similar to
TGACG-motif binding factor GI:2934884 from [Glycine
max]; contains Pfam profile: PF00170 bZIP transcription
factor
Length = 149
Score = 28.3 bits (60), Expect = 2.5
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 8 NKEAEPNTSKKDSQNENSDHDTREINPNDP-GSECSWSLTSYSGVSGLDMARVRADVPKP 66
N + ++S K + E SD + + + GS C S ++ GV+ ++ + + V
Sbjct: 7 NGNSSSSSSHKKHKTEESDEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQNGVSTA 66
Query: 67 IGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRD 121
++ VD++ R R ++R V+ ++ E ++ V ++ R ++ D
Sbjct: 67 KRRRGRNPVDKEYRSLKRLLRNR---VSAQQARERKKVYVSDLESRANELQNNND 118
>At3g09210.1 68416.m01095 KOW domain-containing transcription factor
family protein ; est match
Length = 333
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 78 KSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLETLIVS 128
K RR+ R E+ R K+ R E +L+ + +KR T + +L+TL S
Sbjct: 45 KERRQLRNER-RESKLGYSWREEVEEKLIKKPKKRYATWTEELNLDTLAES 94
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 5 DESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSE 40
DE ++ + NT + + EN D +T E N ND +E
Sbjct: 184 DEEDENDDENTEENGNDEENDDENTEE-NGNDEENE 218
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 27.9 bits (59), Expect = 3.3
Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
Query: 4 GDESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADV 63
G ES E+ + K++ + D R+ + S YS S + ++
Sbjct: 61 GSESGLESGSESEKEERRRSRKDRGKRKSDRKS--SRSRRRRRDYSSSSSDSESESESEY 118
Query: 64 PKPIGKKEMKTVD-RKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKR 120
+E ++ D R+ R+R R E+ K KR+R E ++ ++ K K +++
Sbjct: 119 SD---SEESESEDERRRRKRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKRKEK 173
>At4g39160.1 68417.m05546 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 545
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 74 TVDRKSRRRSRPEKHRHGKVNKRKR-SETRRQLVHRVQKRRPKVTRKRDLETL 125
TV+ +S+R S+ K + KRK+ SE + + ++++ K + +R TL
Sbjct: 238 TVEEQSKRESKTGKSKRATSRKRKKTSEEPNKSSEKTEQKKFKHSSRRQKRTL 290
>At4g28230.1 68417.m04045 expressed protein
Length = 402
Score = 27.9 bits (59), Expect = 3.3
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 54 LDMARVRADVPKPIGKKEMKTVDRKSRRRSRPE---KHRHGKVNKRKRSETRRQLVHRVQ 110
L RV A +GK + T ++ R+RS PE K H + KR+ S+ + RV+
Sbjct: 276 LKPGRVVASRYSQMGKTQ--TGEKDVRKRSLPEDEEKENHKRSEKRRASDESNKSEGRVK 333
Query: 111 KR 112
KR
Sbjct: 334 KR 335
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 64 PKPIGKKEMKTVDRKSRRRSRPEKHRH-GKVNKRKRSETRRQLVHRVQKRRPKVTRKRD 121
P K K V R+ R + P KH H + K+ ET + R++K+R +++D
Sbjct: 94 PNDHEKGASKQVGRRERAKPDPSKHHHRSHLPHSKKIETEEE--RRLRKKRELEKQRQD 150
>At1g74480.1 68414.m08628 RWP-RK domain-containing protein contains
Pfam profile: PF02042 RWP-RK domain
Length = 298
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 45 LTSYSGVSGLDMARVRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKV 93
L SYS S + + R D K+E TV +++R E+HR V
Sbjct: 69 LNSYSSASWNETEQNRGDGASSEKKRENGTVKETTKKRKINERHREHSV 117
>At5g24670.1 68418.m02916 cytidine/deoxycytidylate deaminase family
protein similar to SP|Q9URQ3 tRNA-specific adenosine
deaminase 3 (EC 3.5.4.-) (tRNA-specific adenosine-34
deaminase subunit TAD3) {Saccharomyces cerevisiae};
contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 432
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 7 SNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSY 48
SN ++ K SQ+ + +D+RE DP E + T Y
Sbjct: 321 SNTDSPAKKQKTSSQSPDVQNDSREETVRDPSMERPYLCTGY 362
>At4g10200.1 68417.m01672 hAT dimerisation domain-containing protein
/ transposase-related low similarity to transposase
[Ipomoea purpurea] AB004906 GI:4063770
Length = 733
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 73 KTVDRKSRR---RSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLETLIVS 128
K +DR+ R P K H K K + RR HR KR K K+D L+ S
Sbjct: 69 KNIDRELRDFLVEKGPMKRVHEKYAFPKTAGIRRHFSHRYYKREMKNGDKQDRNWLLYS 127
>At4g01120.1 68417.m00150 G-box binding factor 2 (GBF2) identical to
G-box binding factor 2 (GBF2) SP:P42775 from
[Arabidopsis thaliana];contains Pfam profile: PF00170
bZIP transcription factor
Length = 360
Score = 27.5 bits (58), Expect = 4.4
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 9 KEAEPNTSKK-DSQNE---NSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVP 64
++ P+T ++ SQN +++ ++ P + S + +G++G VP
Sbjct: 192 QQRSPSTGERPSSQNSLPLRGENEKPDVTMGTPVMPTAMSFQNSAGMNG---------VP 242
Query: 65 KPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSE 100
+P +KE+K R+ R++S E R ++ K+ +E
Sbjct: 243 QPWNEKEVK---REKRKQSNRESARRSRLRKQAETE 275
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 27.5 bits (58), Expect = 4.4
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 5 DESNKEAEPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARVRADVP 64
+ES+ +++ + KK + +N D + +E +D + + G D+ +DV
Sbjct: 51 EESSGKSKKDKEKK--KGKNVDSEVKEDKDDDKKKDGKMVSKKHEEGHG-DLEVKESDVK 107
Query: 65 KPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSET 101
+KE K K EK K NK+++ E+
Sbjct: 108 VEEHEKEHKKGKEKKHEELEEEKEGKKKKNKKEKDES 144
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 2 GMGDESNKEAEPNTSKKDSQNENSDHDTRE 31
G GD S + + ++SK+D+Q E + T+E
Sbjct: 90 GDGDASLPKEDESSSKQDNQEEKKEEKTKE 119
>At5g41320.1 68418.m05022 expressed protein
Length = 515
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 78 KSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRD 121
K+ R +P K R + K+ ET+ + V +V+KR+PK D
Sbjct: 53 KTVTREQPVKTRK---RRSKKDETKPEKVKQVRKRKPKTVCVED 93
>At3g52220.1 68416.m05737 expressed protein
Length = 237
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 62 DVPKPIGKKEMKTVDRKSRRR--SRPEKHRHGKVNKRKRSETR--RQLVHRVQKRRPKVT 117
D P + + + K DR+ R+ R ++ RH + KR+R E R R R + ++ K
Sbjct: 170 DGPDDVERDQKK--DRREERKPAKREKEERHDRREKRERHEKRSARDSDDRKKHKKEKKE 227
Query: 118 RKR 120
+KR
Sbjct: 228 KKR 230
>At3g11890.2 68416.m01458 expressed protein
Length = 527
Score = 27.1 bits (57), Expect = 5.8
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 1/109 (0%)
Query: 12 EPNTSKKDSQNENSDHDTREINPNDPGSECSWSLTSYSGVSGLDMARV-RADVPKPIGKK 70
+P+TS+ ++ H ++ P + T + A R +P
Sbjct: 318 KPSTSQSQAEVRTLTHKATHVHTAMPSLSVTEHCTLQKPATSQSQAETSRVQTVEPEACP 377
Query: 71 EMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRK 119
+ +VD+ SR R KR E+R+ RV+ R + K
Sbjct: 378 DFTSVDKPEIVMSRSLTTRKAPAPKRSLQESRKNQDRRVEIHRRRAGHK 426
>At3g10820.1 68416.m01303 transcription elongation factor-related
low similarity to transcription elongation factor
TFIIS.h [Mus musculus] GI:3288547
Length = 416
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 76 DRKSRRRS---RPEKHRHGKV--NKRKRSETRRQLVHRVQKRRPKVTRKR 120
D+++RR RP KH V KR+ ++R Q+V +Q++ VT ++
Sbjct: 300 DQQTRREEADVRPMKHSATDVVEPKRQTKQSREQMVSAIQRKPTAVTEQK 349
>At1g62010.1 68414.m06994 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 415
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 28 DTREINPNDPGSECS-WSLTSYSGVSGLDMARVRADVPKPIGKKEMKTVDR 77
D+R + ND S S G S ++ V + VPK +GK+E K++ R
Sbjct: 94 DSRVLIDNDATSLGSKLQFLQSRGASSSELTEVVSTVPKILGKREGKSLSR 144
>At1g49890.1 68414.m05593 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 659
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 66 PIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRDLETL 125
PI KK+ T S R+S PE+ R V R + E + + Q+R P +R+ + E++
Sbjct: 155 PISKKKETTSTPVSHRKSTPERRRSTPV--RDQRENSKPV---DQQRWPGASRRGNSESV 209
Query: 126 I 126
+
Sbjct: 210 V 210
>At1g23300.1 68414.m02914 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 515
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 4 GDESNKEAEPNTSKKDSQNENSDHDTRE 31
GD+SNK E + ++D N N +++ R+
Sbjct: 488 GDQSNKREEIDLCEEDENNSNGENNHRK 515
>At5g58040.1 68418.m07263 fip1 motif-containing protein contains
Pfam profile PF05182: Fip1 motif
Length = 1192
Score = 26.6 bits (56), Expect = 7.6
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 54 LDMARVRADVPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRR 113
+D A +R ++ +P + D + RRSRPEK+ + S +R+ R++ ++
Sbjct: 764 MDDAGMR-NIYEPDDHINKRRKDEEYLRRSRPEKNEISYGQRESMSRVKRERDDRLEHQK 822
Query: 114 PKVTRK 119
V K
Sbjct: 823 RDVQHK 828
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 2 GMGDESNKEAEPNTSKKDSQNENSDHDTREIN 33
G D +N E+E + + NE S+ + REIN
Sbjct: 133 GNEDSNNGESEKVVDESEGGNEISNEEAREIN 164
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 76 DRKSRRRSRPEKHRHGKVNKRKRSETRRQLVHRVQKRRPKVTRKRD 121
DR+ R KHR K + + E RR+ R + R + R+RD
Sbjct: 430 DREDARELE-RKHRERKERESREDEDRRRRRRREESRDKESRRERD 474
>At1g48290.1 68414.m05394 expressed protein ; expression supported
by MPSS
Length = 444
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 51 VSGLDMARVRAD-VPKPIGKKEMKTVDRKSRRRSRPEKHRHGKVNKRKRSETRR 103
V+ L A V A + +P + VD + R++S+ +R N+RK+S++++
Sbjct: 50 VAELRRASVEAPAIHEPSTRPSHSVVDNRRRKKSKQNGNRLDGDNRRKKSKSKQ 103
>At1g09320.1 68414.m01043 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 517
Score = 26.6 bits (56), Expect = 7.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 31 EINPNDPGSECSWSLTSYSGVSGLDMARVRAD-VPKPIGKKEMKTVDRKSRRRSRPEK-- 87
E++P + G E SW L G D V D + GK+ ++ SR R P +
Sbjct: 387 EVSPEEEGFEDSWFLAKLIEYRGKDKCLVEYDNLKAEDGKEPLREEVNVSRIRPLPLESV 446
Query: 88 -----HRHGKVN 94
RH KVN
Sbjct: 447 MVSPFERHDKVN 458
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.127 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,897,744
Number of Sequences: 28952
Number of extensions: 161082
Number of successful extensions: 967
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 843
Number of HSP's gapped (non-prelim): 142
length of query: 156
length of database: 12,070,560
effective HSP length: 75
effective length of query: 81
effective length of database: 9,899,160
effective search space: 801831960
effective search space used: 801831960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)
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