Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001838-TA|BGIBMGA001838-PA|IPR006578|MADF
(361 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF078790-17|AAC26928.1| 89|Caenorhabditis elegans Hypothetical... 29 5.1
Z81587-3|CAB04700.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical p... 29 6.8
Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical pr... 29 6.8
AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 30.3 bits (65), Expect = 2.2
Identities = 30/182 (16%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 153 EYKRVQESRRKATCEEEVYVPNLWYYDLLSFIFKNEAPEPARSPIPTXXXXXXXXXXXXT 212
EY K EEV V LW+ D +S K E + R+ +
Sbjct: 673 EYAEYATEEEKKAILEEVAVLKLWFEDDVSLETKKEEFDEKRAKLEELTAKPNARKQERL 732
Query: 213 DSPNPTASTFSDLRDALLDARIGMS-----EENVVFPQKILKKFILLYKDLPCLWDKECP 267
D P ++ + ++ E N F L+ L + W+++
Sbjct: 733 DIPKVAEIIEDHFNRSMTFHAMALNLTQFEEGNKTFTDTELEVLTKLIESTTEWWNEKKD 792
Query: 268 AYKIKMKRHDAITKMTELVQEYDPSATRV-HILRKIESLRACVRREYKRVQESRRKANCE 326
++ + K D + K +E+ ++ V +++ K++ + +E ++ ++++++ +
Sbjct: 793 LFEKQAKNEDPVVKASEIAEKARDLEREVRYLVNKLKIASSKKSKESEKKKKTKKEKDTV 852
Query: 327 EE 328
+E
Sbjct: 853 KE 854
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 30.3 bits (65), Expect = 2.2
Identities = 30/182 (16%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 153 EYKRVQESRRKATCEEEVYVPNLWYYDLLSFIFKNEAPEPARSPIPTXXXXXXXXXXXXT 212
EY K EEV V LW+ D +S K E + R+ +
Sbjct: 689 EYAEYATEEEKKAILEEVAVLKLWFEDDVSLETKKEEFDEKRAKLEELTAKPNARKQERL 748
Query: 213 DSPNPTASTFSDLRDALLDARIGMS-----EENVVFPQKILKKFILLYKDLPCLWDKECP 267
D P ++ + ++ E N F L+ L + W+++
Sbjct: 749 DIPKVAEIIEDHFNRSMTFHAMALNLTQFEEGNKTFTDTELEVLTKLIESTTEWWNEKKD 808
Query: 268 AYKIKMKRHDAITKMTELVQEYDPSATRV-HILRKIESLRACVRREYKRVQESRRKANCE 326
++ + K D + K +E+ ++ V +++ K++ + +E ++ ++++++ +
Sbjct: 809 LFEKQAKNEDPVVKASEIAEKARDLEREVRYLVNKLKIASSKKSKESEKKKKTKKEKDTV 868
Query: 327 EE 328
+E
Sbjct: 869 KE 870
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
protein W05B2.4 protein.
Length = 2265
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 310 RREYKRVQESRRKANCEEEVYVPNLWYYDL 339
++E K+ R+ N +E +YV LWYY L
Sbjct: 76 QQEAKKKFRRLREKNRDESIYVAKLWYYVL 105
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Query: 151 RREYKRVQESRRKATCEEEVYVPNLWYYDL 180
+++++R++E R +E +YV LWYY L
Sbjct: 80 KKKFRRLREKNR----DESIYVAKLWYYVL 105
>AF078790-17|AAC26928.1| 89|Caenorhabditis elegans Hypothetical
protein F36H12.1 protein.
Length = 89
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 234 IGMSEENVVFPQKILKKFILLYKDLPCLWDKE--CPAYKIK--MKRHDAITKMTELVQEY 289
+G+S + F + KK L+K LP + +E CP+ +++ ++ D + K + + EY
Sbjct: 13 LGLSAGQMTFTDQWTKKRATLHKQLPVVTPEEPICPSDRVQAVFEQLDQLQKAQQRLTEY 72
Query: 290 DPS-ATRVHILRKIESL 305
S A V + +K E +
Sbjct: 73 LASCAYPVEVPQKAEKM 89
>Z81587-3|CAB04700.1| 362|Caenorhabditis elegans Hypothetical
protein T06G6.4 protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 96 YKDLTCLWDKECPAYKIKMKRHDAITKMTELVQEYDPSATRVHILRKIGSLRACVRREYK 155
Y+ +C+++K+ K K + I ++TE V++ + KI L +R+
Sbjct: 188 YEKYSCVFNKKIAKQKEKGEMKKQIQELTEKVEKKGAGNIEDQLQAKIKDLEDVLRQMTL 247
Query: 156 RV--QESRRKATCEE 168
+ ++++ KATC++
Sbjct: 248 NLTKEQAKSKATCDK 262
>Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 98 DLTCL-WDKECPAYKIKMKRHDAITKMTELVQEYDPSATRVHI 139
DL CL W EC A ++M IT+ E+ ++Y P A +I
Sbjct: 954 DLACLEWLMECGATSVRMSDGQIITRQREM-RDYIPHALSENI 995
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 257 DLPCL-WDKECPAYKIKMKRHDAITKMTELVQEYDPSATRVHI 298
DL CL W EC A ++M IT+ E+ ++Y P A +I
Sbjct: 954 DLACLEWLMECGATSVRMSDGQIITRQREM-RDYIPHALSENI 995
>Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 98 DLTCL-WDKECPAYKIKMKRHDAITKMTELVQEYDPSATRVHI 139
DL CL W EC A ++M IT+ E+ ++Y P A +I
Sbjct: 954 DLACLEWLMECGATSVRMSDGQIITRQREM-RDYIPHALSENI 995
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 257 DLPCL-WDKECPAYKIKMKRHDAITKMTELVQEYDPSATRVHI 298
DL CL W EC A ++M IT+ E+ ++Y P A +I
Sbjct: 954 DLACLEWLMECGATSVRMSDGQIITRQREM-RDYIPHALSENI 995
>Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical
protein F14E5.4 protein.
Length = 408
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 29 LSICTTYAVRGGAEGCAGVEPPIRSTRLNPTASTFSDL 66
L C Y +G AE C + IR+TR +P + DL
Sbjct: 362 LDCCDDYRNKGEAESCEASDLKIRTTRSSPPNNIRRDL 399
>AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical
protein C52E2.5 protein.
Length = 591
Score = 28.3 bits (60), Expect = 9.0
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 70 PLDERIDMSDGNVVFPQKILKKFILLYKDLTCLWDKECPAYKIKMKRHDAITKMTELVQE 129
PL+ER + + Q + +FI +++ D K+ + +T+ T++++
Sbjct: 429 PLNERNYYNTTKMEDWQLSVDQFIGMFQATFSSRDNMLAVEKLNLTT-TCLTRTTQILEN 487
Query: 130 YDPSATRVHILRKIGSLRACVR 151
DP A + LR + L AC++
Sbjct: 488 LDPVAIKTIALRTMSFLEACLQ 509
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.135 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,074,899
Number of Sequences: 27539
Number of extensions: 380012
Number of successful extensions: 918
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 910
Number of HSP's gapped (non-prelim): 18
length of query: 361
length of database: 12,573,161
effective HSP length: 82
effective length of query: 279
effective length of database: 10,314,963
effective search space: 2877874677
effective search space used: 2877874677
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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