GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001837-TA|BGIBMGA001837-PA|undefined
         (173 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   4.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   5.5  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 7/25 (28%), Positives = 17/25 (68%)

Query: 51  IRNEIIPLANVISKTGSQIETTHAN 75
           +R+E++ + NV+ K   + +TT+ +
Sbjct: 313 VRSEVVKILNVLKKIALRRQTTNGD 337


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 7/25 (28%), Positives = 17/25 (68%)

Query: 51  IRNEIIPLANVISKTGSQIETTHAN 75
           +R+E++ + NV+ K   + +TT+ +
Sbjct: 239 VRSEVVKILNVLKKIALRRQTTNGD 263


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 49  PAIRNEIIPLANVISKTGSQIETTHANFRNEV 80
           P +R+E+  LA V    G  IET +  F  ++
Sbjct: 606 PKMRHELQKLAQVYRILGETIETWNKLFGYQI 637


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/26 (26%), Positives = 16/26 (61%)

Query: 9   ELTKKAPNKNLANDDEGRVGEMVTAD 34
           E+T +   + L+N +  ++G+ VT +
Sbjct: 444 EITWELYGRRLSNSERNQIGQYVTVN 469


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 93  FLDFVRHARPSF 104
           F+D V+H RP F
Sbjct: 207 FIDVVQHNRPEF 218


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.129    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,336
Number of Sequences: 317
Number of extensions: 982
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 173
length of database: 114,650
effective HSP length: 53
effective length of query: 120
effective length of database: 97,849
effective search space: 11741880
effective search space used: 11741880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)