GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001837-TA|BGIBMGA001837-PA|undefined
         (173 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025122-1|ABE73293.1|  291|Drosophila melanogaster IP09348p pro...    28   7.9  
AE014134-1905|AAF52965.1|  291|Drosophila melanogaster CG13144-P...    28   7.9  

>BT025122-1|ABE73293.1|  291|Drosophila melanogaster IP09348p
           protein.
          Length = 291

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 138 EKKSIQRNPRRSIGNGTKKPCPRCG 162
           E + +QR  RRSI NG+  P P+ G
Sbjct: 85  EMEQLQRTERRSIINGSDTPKPKTG 109


>AE014134-1905|AAF52965.1|  291|Drosophila melanogaster CG13144-PA
           protein.
          Length = 291

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 138 EKKSIQRNPRRSIGNGTKKPCPRCG 162
           E + +QR  RRSI NG+  P P+ G
Sbjct: 85  EMEQLQRTERRSIINGSDTPKPKTG 109


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.314    0.129    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,636,638
Number of Sequences: 52641
Number of extensions: 252047
Number of successful extensions: 607
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 605
Number of HSP's gapped (non-prelim): 2
length of query: 173
length of database: 24,830,863
effective HSP length: 80
effective length of query: 93
effective length of database: 20,619,583
effective search space: 1917621219
effective search space used: 1917621219
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)