Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001835-TA|BGIBMGA001835-PA|IPR001159|Double-stranded RNA
binding, IPR000999|Ribonuclease III
(152 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17KP3 Cluster: Dicer-1; n=2; Aedes aegypti|Rep: Dicer-... 184 1e-45
UniRef50_UPI0000DB7B4D Cluster: PREDICTED: similar to Dicer-1 CG... 175 3e-43
UniRef50_Q9VCU9 Cluster: Endoribonuclease Dcr-1; n=18; Sophophor... 173 2e-42
UniRef50_UPI0000D5738B Cluster: PREDICTED: similar to CG4792-PA;... 168 5e-41
UniRef50_UPI00015B5D4A Cluster: PREDICTED: similar to dicer-1; n... 167 7e-41
UniRef50_Q86MA9 Cluster: Dicer-1; n=5; Coelomata|Rep: Dicer-1 - ... 167 1e-40
UniRef50_UPI0000586635 Cluster: PREDICTED: similar to Dicer prot... 142 2e-33
UniRef50_Q9UPY3 Cluster: Endoribonuclease Dicer; n=50; Eumetazoa... 132 4e-30
UniRef50_Q5C1G8 Cluster: SJCHGC08817 protein; n=1; Schistosoma j... 123 1e-27
UniRef50_P34529 Cluster: Endoribonuclease dcr-1; n=2; Caenorhabd... 115 4e-25
UniRef50_UPI00015B633C Cluster: PREDICTED: similar to dicer-1; n... 81 1e-14
UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA;... 78 7e-14
UniRef50_UPI0000DB7B59 Cluster: PREDICTED: similar to Dicer-1 CG... 74 2e-12
UniRef50_Q174T8 Cluster: Dicer-1; n=3; Culicidae|Rep: Dicer-1 - ... 72 5e-12
UniRef50_A7SIA4 Cluster: Predicted protein; n=1; Nematostella ve... 60 2e-08
UniRef50_Q9SP32 Cluster: Endoribonuclease Dicer homolog; n=8; Em... 55 6e-07
UniRef50_Q2HTA7 Cluster: Helicase, C-terminal; Argonaute and Dic... 54 1e-06
UniRef50_A7PXV4 Cluster: Chromosome chr15 scaffold_37, whole gen... 54 2e-06
UniRef50_Q0IWV3 Cluster: Os10g0485600 protein; n=7; Eukaryota|Re... 53 3e-06
UniRef50_Q95YG3 Cluster: Double-strand-specific ribonuclease; n=... 53 3e-06
UniRef50_A7P4V9 Cluster: Chromosome chr4 scaffold_6, whole genom... 49 5e-05
UniRef50_Q01HF5 Cluster: OSIGBa0157K09-H0214G12.2 protein; n=4; ... 48 9e-05
UniRef50_A7LFZ6 Cluster: Dicer-like protein; n=2; Oryza sativa (... 48 9e-05
UniRef50_Q9M9P8 Cluster: T17B22.1 protein; n=13; Eukaryota|Rep: ... 46 3e-04
UniRef50_Q9LXW7 Cluster: Putative uncharacterized protein T15B3_... 45 8e-04
UniRef50_Q10HL3 Cluster: Type III restriction enzyme, res subuni... 45 8e-04
UniRef50_A3A0R6 Cluster: Putative uncharacterized protein; n=4; ... 44 0.001
UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|... 43 0.002
UniRef50_A7PX71 Cluster: Chromosome chr12 scaffold_36, whole gen... 42 0.004
UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core eu... 40 0.031
UniRef50_Q3SE71 Cluster: Ribonuclease with two RNaseIII domains;... 38 0.094
UniRef50_Q6BCJ7 Cluster: Dicer-related RNase III protein Dcl1p; ... 36 0.29
UniRef50_Q1YZ17 Cluster: Putative cation transport ATPase; n=1; ... 36 0.50
UniRef50_Q69KJ0 Cluster: CAF protein-like; n=2; Oryza sativa|Rep... 36 0.50
UniRef50_Q0E5R5 Cluster: Putative dicer-like protein; n=1; Mucor... 36 0.50
UniRef50_UPI00015B6129 Cluster: PREDICTED: similar to ribonuclea... 35 0.87
UniRef50_Q0MYW8 Cluster: Putative calcium binding protein; n=3; ... 35 0.87
UniRef50_A0DYG6 Cluster: Chromosome undetermined scaffold_7, who... 35 0.87
UniRef50_Q3SD86 Cluster: Dicer-like ribonuclease with helicase a... 34 1.2
UniRef50_Q1DKI1 Cluster: Dicer-like protein 1 [Includes: Endorib... 34 1.2
UniRef50_O23395 Cluster: UFD1 like protein; n=8; Magnoliophyta|R... 34 1.5
UniRef50_A7PV34 Cluster: Chromosome chr4 scaffold_32, whole geno... 34 1.5
UniRef50_A2Y2L5 Cluster: Putative uncharacterized protein; n=2; ... 34 1.5
UniRef50_Q648X5 Cluster: Ribonuclease III; n=3; environmental sa... 34 1.5
UniRef50_Q3AVE8 Cluster: NHL repeat; n=6; Cyanobacteria|Rep: NHL... 33 2.0
UniRef50_Q6SFI8 Cluster: Ribonuclease III; n=2; Bacteria|Rep: Ri... 33 2.0
UniRef50_Q0RZL2 Cluster: Putative uncharacterized protein; n=1; ... 33 2.0
UniRef50_A6SBX3 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_A2WR94 Cluster: Putative uncharacterized protein; n=3; ... 33 3.5
UniRef50_A7I5W5 Cluster: Ribonuclease III; n=1; Candidatus Metha... 33 3.5
UniRef50_A5UJK3 Cluster: Ribonuclease III (DsRNA-specific), Rnc;... 33 3.5
UniRef50_Q2Y6X8 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_Q9FKF0 Cluster: Emb|CAB88120.1; n=1; Arabidopsis thalia... 32 4.7
UniRef50_P0C5H7 Cluster: Dicer-like protein 2 [Includes: Endorib... 32 4.7
UniRef50_Q8FNE7 Cluster: Putative ABC transporter ATP-binding pr... 32 6.2
UniRef50_Q8EW40 Cluster: Ribonuclease III; n=1; Mycoplasma penet... 32 6.2
UniRef50_Q3JSH2 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_A5UYV6 Cluster: Cobalt transport protein; n=2; Roseifle... 32 6.2
UniRef50_A6QZ52 Cluster: Predicted protein; n=1; Ajellomyces cap... 32 6.2
UniRef50_A3X4P1 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_A1T425 Cluster: Type IV secretory pathway VirB4 compone... 31 8.1
UniRef50_A0UPZ7 Cluster: Putative uncharacterized protein; n=2; ... 31 8.1
UniRef50_Q5K7D9 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
>UniRef50_Q17KP3 Cluster: Dicer-1; n=2; Aedes aegypti|Rep: Dicer-1 -
Aedes aegypti (Yellowfever mosquito)
Length = 2193
Score = 184 bits (447), Expect = 1e-45
Identities = 88/133 (66%), Positives = 104/133 (78%)
Query: 1 MLGRQHYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGREL 60
++ ++YLI EDE ++AEDVEVPKALGD+FESVAGAIFLDS MSL AVWK Y +MG E+
Sbjct: 2053 IISEEYYLISEDECDEAEDVEVPKALGDVFESVAGAIFLDSNMSLDAVWKVYRSMMGPEI 2112
Query: 61 EAFSAAAPKSPVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAK 120
E FS + PKSP+RELLE EP+TAKFGKPE+LADGRRVRV VE NYRIAK
Sbjct: 2113 EQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFGKGTFRGIGRNYRIAK 2172
Query: 121 GTAARCALRHLRR 133
TAA+CALR L++
Sbjct: 2173 CTAAKCALRQLKK 2185
>UniRef50_UPI0000DB7B4D Cluster: PREDICTED: similar to Dicer-1
CG4792-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to
Dicer-1 CG4792-PA - Apis mellifera
Length = 1838
Score = 175 bits (427), Expect = 3e-43
Identities = 84/132 (63%), Positives = 101/132 (76%)
Query: 2 LGRQHYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELE 61
+ ++YLI E+E E+AEDVEVPKALGD+FES+AGAI+LDSGMSL AVW Y +M E+E
Sbjct: 1698 ISEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIE 1757
Query: 62 AFSAAAPKSPVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKG 121
FS PKSP+RELLE EP+TAKFGKPE+LADGRRVRV V+ NYRIAK
Sbjct: 1758 QFSTNVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRNYRIAKC 1817
Query: 122 TAARCALRHLRR 133
TAA+CAL+ L+R
Sbjct: 1818 TAAKCALKKLKR 1829
>UniRef50_Q9VCU9 Cluster: Endoribonuclease Dcr-1; n=18;
Sophophora|Rep: Endoribonuclease Dcr-1 - Drosophila
melanogaster (Fruit fly)
Length = 2249
Score = 173 bits (420), Expect = 2e-42
Identities = 81/132 (61%), Positives = 99/132 (75%)
Query: 2 LGRQHYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELE 61
+ ++YL+ E+E + AEDVEVPKALGD+FES+AGAIFLDS MSL VW Y +M E+E
Sbjct: 2110 ISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIE 2169
Query: 62 AFSAAAPKSPVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKG 121
FS + PKSP+RELLE EP+TAKFGKPE+LADGRRVRV V+ NYRIAK
Sbjct: 2170 QFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKC 2229
Query: 122 TAARCALRHLRR 133
TAA+CALR L++
Sbjct: 2230 TAAKCALRQLKK 2241
>UniRef50_UPI0000D5738B Cluster: PREDICTED: similar to CG4792-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG4792-PA
- Tribolium castaneum
Length = 1835
Score = 168 bits (408), Expect = 5e-41
Identities = 82/121 (67%), Positives = 94/121 (77%)
Query: 13 EMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPV 72
E E+ EDVEVPKALGD+FESVAGAIFLDSGMSL AVWK Y +M E+E FS PKSP+
Sbjct: 1705 ETEEVEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWKVYYNMMKSEIEQFSNKVPKSPI 1764
Query: 73 RELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRHLR 132
RELLE EP+TAKFGKPE+LADGRRVRV VE NYRIAK TAA+CAL++L+
Sbjct: 1765 RELLELEPETAKFGKPEKLADGRRVRVTVEVFGKGVFKGIGRNYRIAKCTAAKCALKNLK 1824
Query: 133 R 133
+
Sbjct: 1825 K 1825
>UniRef50_UPI00015B5D4A Cluster: PREDICTED: similar to dicer-1; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to dicer-1 -
Nasonia vitripennis
Length = 1917
Score = 167 bits (407), Expect = 7e-41
Identities = 83/137 (60%), Positives = 102/137 (74%), Gaps = 3/137 (2%)
Query: 2 LGRQHYLIHE---DEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGR 58
+ ++YLI E +E E+AEDVEVPKALGD+FES+AGAI+LDS MSL AVW Y +M
Sbjct: 1774 ISEEYYLIGEREFEEAEEAEDVEVPKALGDVFESLAGAIYLDSNMSLDAVWAVYFEIMKS 1833
Query: 59 ELEAFSAAAPKSPVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRI 118
E+E FSA PKSP+RELLE EP+TAKFGKPE+LADGRRVRV V+ NYRI
Sbjct: 1834 EIEQFSANVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRNYRI 1893
Query: 119 AKGTAARCALRHLRRGR 135
AK TAA+CAL+ L++ +
Sbjct: 1894 AKCTAAKCALKKLKKSQ 1910
>UniRef50_Q86MA9 Cluster: Dicer-1; n=5; Coelomata|Rep: Dicer-1 -
Anopheles gambiae (African malaria mosquito)
Length = 2259
Score = 167 bits (405), Expect = 1e-40
Identities = 79/118 (66%), Positives = 93/118 (78%)
Query: 16 QAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVREL 75
+AEDVEVPKALGD+FES+AGAIFLDS MSL VWK Y ++MG E+E FS++ PKSP+REL
Sbjct: 2132 EAEDVEVPKALGDVFESIAGAIFLDSDMSLDTVWKVYRKMMGPEIEKFSSSVPKSPIREL 2191
Query: 76 LEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRHLRR 133
LE EP+TAKFGKPE+L DGRRVRV VE NYRIAK TAA+CALR L++
Sbjct: 2192 LEMEPETAKFGKPEKLTDGRRVRVTVEVFGKGTFRGIGRNYRIAKCTAAKCALRQLKK 2249
>UniRef50_UPI0000586635 Cluster: PREDICTED: similar to Dicer protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Dicer protein - Strongylocentrotus purpuratus
Length = 1850
Score = 142 bits (345), Expect = 2e-33
Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 11 EDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKS 70
+ E E++ED+EVPKALGD+FESVAGAI+LDSGMSL AVWK Y +M +++E +++ P S
Sbjct: 1725 DGEQEESEDIEVPKALGDIFESVAGAIYLDSGMSLNAVWKVYYPMMKQQIEQYASDLPIS 1784
Query: 71 PVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRH 130
PVRELLE EP+TA+FG PE+ DG + RV V NY IAK TAAR ALRH
Sbjct: 1785 PVRELLEMEPETARFGPPEKTIDG-KTRVTVNVVGKGQFKGIGRNYHIAKATAARFALRH 1843
Query: 131 LR 132
L+
Sbjct: 1844 LK 1845
>UniRef50_Q9UPY3 Cluster: Endoribonuclease Dicer; n=50; Eumetazoa|Rep:
Endoribonuclease Dicer - Homo sapiens (Human)
Length = 1912
Score = 132 bits (318), Expect = 4e-30
Identities = 68/122 (55%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 11 EDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKS 70
E++ E+ ED+EVPKA+GD+FES+AGAI++DSGMSL VW+ Y +M +E FSA P+S
Sbjct: 1783 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRS 1842
Query: 71 PVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRH 130
PVRELLE EP+TAKF ER DG +VRV VE +YRIAK AAR ALR
Sbjct: 1843 PVRELLEMEPETAKFSPAERTYDG-KVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRS 1901
Query: 131 LR 132
L+
Sbjct: 1902 LK 1903
>UniRef50_Q5C1G8 Cluster: SJCHGC08817 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08817 protein - Schistosoma
japonicum (Blood fluke)
Length = 167
Score = 123 bits (297), Expect = 1e-27
Identities = 60/117 (51%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 17 AEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELL 76
++DVE+PKALGD+FES+AGAIFLDS SL VW+ + +M +E ++A PKSPVR+LL
Sbjct: 35 SDDVEIPKALGDIFESLAGAIFLDSNFSLDTVWQVFYPIMKERIERYTACIPKSPVRQLL 94
Query: 77 EAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRHLRR 133
E EP+ KF +P R+ DG R+ VC NYR+AK AA+ ALR LRR
Sbjct: 95 ELEPEGTKFERPRRMVDG-RISVCAHVLGKGRFYGVGRNYRLAKSLAAKRALRVLRR 150
>UniRef50_P34529 Cluster: Endoribonuclease dcr-1; n=2;
Caenorhabditis|Rep: Endoribonuclease dcr-1 -
Caenorhabditis elegans
Length = 1845
Score = 115 bits (277), Expect = 4e-25
Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 11 EDEME--QAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAP 68
E+E++ Q ED+EVPKA+GD+FESVAGAI+LDSG +L W+ +M +E A P
Sbjct: 1707 EEEIDEGQEEDIEVPKAMGDIFESVAGAIYLDSGRNLDTTWQVIFHMMRGTIELCCANPP 1766
Query: 69 KSPVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCAL 128
+SP+REL+E E +F K ER+ + +VRV VE NYRIAK TAA+ AL
Sbjct: 1767 RSPIRELMEFEQSKVRFSKMERILESGKVRVTVEVVNNMRFTGMGRNYRIAKATAAKRAL 1826
Query: 129 RHLRRGRCSARPPP 142
++L + R P
Sbjct: 1827 KYLHQIEQQRRQSP 1840
>UniRef50_UPI00015B633C Cluster: PREDICTED: similar to dicer-1; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to dicer-1 -
Nasonia vitripennis
Length = 1563
Score = 81.0 bits (191), Expect = 1e-14
Identities = 38/78 (48%), Positives = 50/78 (64%)
Query: 8 LIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAA 67
L+ E+E AE V+VPK LGD++ESV GAIFLDSG +L VW+ LM E++ FS
Sbjct: 1485 LLEEEECNMAEHVDVPKVLGDIYESVIGAIFLDSGKNLEVVWQVIYNLMKNEIDLFSKNV 1544
Query: 68 PKSPVRELLEAEPDTAKF 85
PK P+R + E + KF
Sbjct: 1545 PKQPIRVIHETQGANPKF 1562
>UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG6493-PA
- Tribolium castaneum
Length = 1623
Score = 78.2 bits (184), Expect = 7e-14
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 8 LIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAA 67
L+ EDEM AE V+VPK LGD+FE++AGAI+LDS L VW+ + +++ RE++ FS
Sbjct: 1495 LLEEDEMNIAEYVDVPKVLGDIFEALAGAIYLDSNKDLKTVWRVFYKIIWREIDLFSKNV 1554
Query: 68 PKSPVRELLE 77
PK+ +R L E
Sbjct: 1555 PKNVIRRLYE 1564
>UniRef50_UPI0000DB7B59 Cluster: PREDICTED: similar to Dicer-1
CG4792-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to
Dicer-1 CG4792-PA - Apis mellifera
Length = 1040
Score = 73.7 bits (173), Expect = 2e-12
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 8 LIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAA 67
L+ E+E AE V+VPK LGD+FES+ GAI+LDS +L VW+ +M +E++ FS
Sbjct: 933 LLEENECNIAEHVDVPKVLGDIFESIIGAIYLDSNKNLLVVWEIIYSIMHKEIDEFSKNI 992
Query: 68 PKSPVRELLEAE 79
PK P+R L E +
Sbjct: 993 PKQPIRILYETQ 1004
>UniRef50_Q174T8 Cluster: Dicer-1; n=3; Culicidae|Rep: Dicer-1 - Aedes
aegypti (Yellowfever mosquito)
Length = 1658
Score = 72.1 bits (169), Expect = 5e-12
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 8 LIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAA 67
L+ E + + AE V+VPKALGD+FES+ A+FLDSG A W+ +MG E+ F+
Sbjct: 1525 LVEESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAATWQVIYGMMGNEILTFTENT 1584
Query: 68 PKSPVRELLEAEPD-TAKFGKPERLADGRRVRVCVE-XXXXXXXXXXXXNYRIAKGTAAR 125
P VR+L E +P F + D V++ E N AK AA+
Sbjct: 1585 PIQIVRQLYEFKPSCKPTFSRAIPDEDTVLVKLRYEIRNQQHEAYGFGQNKDDAKRAAAK 1644
Query: 126 CALRHLRRGRCSAR 139
AL+ LR+ SA+
Sbjct: 1645 AALQVLRKHYRSAK 1658
>UniRef50_A7SIA4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 261
Score = 60.5 bits (140), Expect = 2e-08
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 18 EDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLE 77
E +EVPK LGDLFE++ GA+++D G W L+ +E +S P SP R+L+E
Sbjct: 143 EAIEVPKVLGDLFEALLGALYVDCGRDEELAWSVIYPLLTPIIEHYSVHLPISPTRQLVE 202
Query: 78 AEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRHLR 132
P A F + G V N +IA+ TAA+ AL ++
Sbjct: 203 MMPGAATFTCLSQNVIGHHACELV-VKGYGRFMGTGRNAQIARSTAAQHALARIK 256
>UniRef50_Q9SP32 Cluster: Endoribonuclease Dicer homolog; n=8;
Embryophyta|Rep: Endoribonuclease Dicer homolog -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1909
Score = 55.2 bits (127), Expect = 6e-07
Identities = 40/128 (31%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 19 DVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLEA 78
D + PK LGD+ ES+AGAIFLDSG A WK + L+ + P PVREL E
Sbjct: 1684 DCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLL--QPMVTPETLPMHPVRELQER 1741
Query: 79 EPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRHLRRGRCSA 138
A+ + + G V V ++A+ AAR AL L+ +
Sbjct: 1742 CQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIAE 1801
Query: 139 RPPPHTHS 146
H ++
Sbjct: 1802 SKEKHINN 1809
>UniRef50_Q2HTA7 Cluster: Helicase, C-terminal; Argonaute and Dicer
protein, PAZ; Ribonuclease III, bacterial; n=1; Medicago
truncatula|Rep: Helicase, C-terminal; Argonaute and Dicer
protein, PAZ; Ribonuclease III, bacterial - Medicago
truncatula (Barrel medic)
Length = 1939
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 19 DVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLE 77
D + PK LGD+ ES+AGAIFLDSG + VWK + L+ + P PVREL E
Sbjct: 1726 DCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQPLLHPMVT--PETLPMHPVRELQE 1782
>UniRef50_A7PXV4 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1961
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 19 DVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLE 77
D + PK LGD+ ES+AGAIFLDSG VWK + L+ + P PVREL E
Sbjct: 1747 DCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVT--PETLPMHPVRELQE 1803
>UniRef50_Q0IWV3 Cluster: Os10g0485600 protein; n=7; Eukaryota|Rep:
Os10g0485600 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1605
Score = 52.8 bits (121), Expect = 3e-06
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 11 EDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKS 70
E E Q +VPK LGD+ ES+AGA+F+D+ ++ VW+ + L+ + A P
Sbjct: 1385 ESEFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLSPLITPDKLALP-- 1442
Query: 71 PVRELLE 77
P RELLE
Sbjct: 1443 PYRELLE 1449
>UniRef50_Q95YG3 Cluster: Double-strand-specific ribonuclease; n=28;
Sophophora|Rep: Double-strand-specific ribonuclease -
Drosophila melanogaster (Fruit fly)
Length = 1722
Score = 52.8 bits (121), Expect = 3e-06
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 13 EMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPV 72
E + +V+VPKALGD+ E++ A++LD L W+ L EL+ F+ P + +
Sbjct: 1599 EFSMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLFEPELQEFTRKVPINHI 1657
Query: 73 RELLEAEPDTAKFGKPERLADGRRVRVCVEXX---XXXXXXXXXXNYRIAKGTAARCALR 129
R+L+E + FG P + +G V V + N AK +AA+ AL+
Sbjct: 1658 RQLVEHKHAKPVFGSP--IVEGGTVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQ 1715
Query: 130 HLRRGRCSA 138
L +C A
Sbjct: 1716 QL--SKCDA 1722
>UniRef50_A7P4V9 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1593
Score = 48.8 bits (111), Expect = 5e-05
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 7 YLIHEDEMEQA-EDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSA 65
YL D++ + + PKALGDL ES+AGAI +D+ ++L VW+ + L+ +
Sbjct: 1302 YLSGSDDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKL 1361
Query: 66 AAPKSPVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXX---XXNYRIAKGT 122
P P+REL E F K + G V + N + AKG
Sbjct: 1362 ELP--PLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCGRNKKAAKGQ 1419
Query: 123 AARCALRHLRR 133
AA L++L +
Sbjct: 1420 AAAQLLKNLEK 1430
>UniRef50_Q01HF5 Cluster: OSIGBa0157K09-H0214G12.2 protein; n=4; Oryza
sativa|Rep: OSIGBa0157K09-H0214G12.2 protein - Oryza
sativa (Rice)
Length = 1604
Score = 48.0 bits (109), Expect = 9e-05
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 9 IHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELE-AFSAAA 67
+ E + E+ PKALGD+ ES GA+ LDSG +L VWK L+ L A
Sbjct: 1272 LSNSEKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTN 1331
Query: 68 PKSPVRELLEAEPDTAKFGKPERLADG 94
P +REL + KP + ADG
Sbjct: 1332 PMRELRELCQCHGFELGLPKPMK-ADG 1357
>UniRef50_A7LFZ6 Cluster: Dicer-like protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Dicer-like protein - Oryza
sativa subsp. japonica (Rice)
Length = 1657
Score = 48.0 bits (109), Expect = 9e-05
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 9 IHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELE-AFSAAA 67
+ E + E+ PKALGD+ ES GA+ LDSG +L VWK L+ L A
Sbjct: 1325 LSNSEKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTN 1384
Query: 68 PKSPVRELLEAEPDTAKFGKPERLADG 94
P +REL + KP + ADG
Sbjct: 1385 PMRELRELCQCHGFELGLPKPMK-ADG 1410
>UniRef50_Q9M9P8 Cluster: T17B22.1 protein; n=13; Eukaryota|Rep:
T17B22.1 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 2042
Score = 46.4 bits (105), Expect = 3e-04
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 19 DVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLE 77
D+ PK LGD+ ES+AGAIF+DSG + V+ S L+G + PVREL E
Sbjct: 1927 DISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMIT--PETVKLHPVRELTE 1983
>UniRef50_Q9LXW7 Cluster: Putative uncharacterized protein T15B3_60;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein T15B3_60 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1531
Score = 44.8 bits (101), Expect = 8e-04
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 20 VEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLEAE 79
++ PKALGD+ ES+AGA+ +D+ + L VW+ + L+ + P P REL E
Sbjct: 1269 IQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLP--PYRELNELC 1326
Query: 80 PDTAKFGKPERLADGRRVRVCVE 102
F + + DG + + ++
Sbjct: 1327 DSLGYFFRVKCSNDGVKAQATIQ 1349
>UniRef50_Q10HL3 Cluster: Type III restriction enzyme, res subunit
family protein, expressed; n=10; Oryza sativa|Rep: Type
III restriction enzyme, res subunit family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1410
Score = 44.8 bits (101), Expect = 8e-04
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 20 VEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLE 77
+ +PK LGD+ ES+AGAI+LDS VW+S RL+ E A PV+ L E
Sbjct: 1286 IGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLL--EPLATPETIEPDPVKGLQE 1341
>UniRef50_A3A0R6 Cluster: Putative uncharacterized protein; n=4; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. japonica (Rice)
Length = 1889
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 23 PKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLE 77
PK LGD+ ES+AGAI LD+ + L VW + L+ + + P P REL+E
Sbjct: 1304 PKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELP--PYRELIE 1356
>UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|Rep:
Dicer-like 4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1702
Score = 43.2 bits (97), Expect = 0.002
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 16 QAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVREL 75
Q+E PK LGDL ES GA+FLD G +L VW + + SP++EL
Sbjct: 1410 QSEGPRCPKVLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQI--SPIKEL 1467
Query: 76 LE 77
+E
Sbjct: 1468 IE 1469
>UniRef50_A7PX71 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 287
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 9 IHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLM 56
I E + +EVPK L D+ ES GA+F+D S+ VWK + L+
Sbjct: 138 IKEYPLHSNGQIEVPKVLADVVESTIGAVFVDCNCSVDTVWKVFKGLL 185
>UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core
eudicotyledons|Rep: Similarity to CAF protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 391
Score = 39.5 bits (88), Expect = 0.031
Identities = 31/112 (27%), Positives = 45/112 (40%)
Query: 20 VEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLEAE 79
V+ PK L DLFES+AGA+++D L +W + L+ + PV L +
Sbjct: 181 VKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFKLC 240
Query: 80 PDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRHL 131
K + DG + N IA+ AA+ ALR L
Sbjct: 241 HKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKL 292
>UniRef50_Q3SE71 Cluster: Ribonuclease with two RNaseIII domains;
n=2; Paramecium tetraurelia|Rep: Ribonuclease with two
RNaseIII domains - Paramecium tetraurelia
Length = 632
Score = 37.9 bits (84), Expect = 0.094
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 6/37 (16%)
Query: 21 EVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMG 57
E+PK GD+FESVA AI LDSG WK ++ G
Sbjct: 589 EIPKLYGDIFESVAAAILLDSG------WKGLNQVYG 619
>UniRef50_Q6BCJ7 Cluster: Dicer-related RNase III protein Dcl1p; n=2;
Tetrahymena thermophila|Rep: Dicer-related RNase III
protein Dcl1p - Tetrahymena thermophila
Length = 1275
Score = 36.3 bits (80), Expect = 0.29
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 23 PKALGDLFESVAGAIFLDSGMS 44
PK LGDL+ESVAGAI +DS +S
Sbjct: 1144 PKVLGDLWESVAGAIIMDSDIS 1165
>UniRef50_Q1YZ17 Cluster: Putative cation transport ATPase; n=1;
Photobacterium profundum 3TCK|Rep: Putative cation
transport ATPase - Photobacterium profundum 3TCK
Length = 718
Score = 35.5 bits (78), Expect = 0.50
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 35 GAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLEAEPDTAKFGKPERLADG 94
GA+FL + G V + +G LE F+ ++ ++ L++ PDT R+ DG
Sbjct: 171 GALFLGENIEAGLVLLLFS--LGEMLEGFAGRKARAGIKSLMQLTPDTV-----TRIVDG 223
Query: 95 RRVRVCVE 102
+R ++ VE
Sbjct: 224 KREKIQVE 231
>UniRef50_Q69KJ0 Cluster: CAF protein-like; n=2; Oryza sativa|Rep:
CAF protein-like - Oryza sativa subsp. japonica (Rice)
Length = 299
Score = 35.5 bits (78), Expect = 0.50
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 20 VEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLE 77
++ PK L D+ ES+ GAI+ DS + VW+ + +L + + K PV EL E
Sbjct: 161 LDPPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLG--KHPVSELFE 216
>UniRef50_Q0E5R5 Cluster: Putative dicer-like protein; n=1; Mucor
circinelloides|Rep: Putative dicer-like protein - Mucor
circinelloides
Length = 1529
Score = 35.5 bits (78), Expect = 0.50
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 23 PKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLM 56
PK L D+ ES+ GA+F+D+G +L V + RL+
Sbjct: 1377 PKVLSDVVESLIGAVFVDAGFNLDPVLGLFDRLL 1410
>UniRef50_UPI00015B6129 Cluster: PREDICTED: similar to ribonuclease
iii; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
ribonuclease iii - Nasonia vitripennis
Length = 1381
Score = 34.7 bits (76), Expect = 0.87
Identities = 13/44 (29%), Positives = 27/44 (61%)
Query: 2 LGRQHYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSL 45
L + Y+++ + D+E+ A+ + FE++ GA+FLD G+ +
Sbjct: 928 LNLEQYMLYAHGSDLCHDLELRHAMANCFEALMGALFLDGGIRI 971
>UniRef50_Q0MYW8 Cluster: Putative calcium binding protein; n=3;
Emiliania huxleyi|Rep: Putative calcium binding protein
- Emiliania huxleyi
Length = 365
Score = 34.7 bits (76), Expect = 0.87
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 12 DEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSP 71
D +E AED + + D +S +G + + AV G E A+A ++P
Sbjct: 78 DAVEPAEDKNILQKAADYVKSFSGRVEPEPAAKEPAVEPEAAPEGGYEAPKEEASAEEAP 137
Query: 72 VRELLEAEPDTAKF 85
E E EP+TA F
Sbjct: 138 AEEAPEPEPETASF 151
>UniRef50_A0DYG6 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 822
Score = 34.7 bits (76), Expect = 0.87
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 20 VEVPKALGDLFESVAGAIFLDSG 42
V VPK L D FE++ GAIF+D G
Sbjct: 707 VRVPKVLSDTFEALVGAIFMDGG 729
>UniRef50_Q3SD86 Cluster: Dicer-like ribonuclease with helicase and
Rnase III domains; n=1; Paramecium tetraurelia|Rep:
Dicer-like ribonuclease with helicase and Rnase III
domains - Paramecium tetraurelia
Length = 1797
Score = 34.3 bits (75), Expect = 1.2
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 4 RQHYLIHEDEMEQAEDVE-VPKALGDLFESVAGAIFLDSGMS 44
+Q Y + D++ + E + K LGD+FES+ GAIF+DS +
Sbjct: 1658 KQMYNEYYDDISKMYTSEPIIKILGDVFESIVGAIFVDSSFN 1699
>UniRef50_Q1DKI1 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)]; n=2; Coccidioides
immitis|Rep: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)] - Coccidioides immitis
Length = 1464
Score = 34.3 bits (75), Expect = 1.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 23 PKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELE 61
PK L D+ E+ GAIF+DSG S V + + + + + E
Sbjct: 1319 PKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFLKKHFE 1357
>UniRef50_O23395 Cluster: UFD1 like protein; n=8; Magnoliophyta|Rep:
UFD1 like protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 778
Score = 33.9 bits (74), Expect = 1.5
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 20 VEVPKALGDLFESVAGAIFLDSGMSLGAVWK 50
++VPK L D+ ES GAIF+D S VWK
Sbjct: 174 LKVPKVLADIVESTIGAIFMDCN-STETVWK 203
>UniRef50_A7PV34 Cluster: Chromosome chr4 scaffold_32, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_32, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1340
Score = 33.9 bits (74), Expect = 1.5
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 23 PKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLM 56
PK LGD+ ES+AGAI +DS + V++S L+
Sbjct: 1223 PKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLL 1256
>UniRef50_A2Y2L5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 344
Score = 33.9 bits (74), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 20 VEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMG 57
V+ PK L D+ E++A A+++D L +WK L G
Sbjct: 157 VKAPKVLADIVEAIAAAVYVDCKFDLEKLWKRLTWLHG 194
>UniRef50_Q648X5 Cluster: Ribonuclease III; n=3; environmental
samples|Rep: Ribonuclease III - uncultured archaeon
GZfos36D8
Length = 262
Score = 33.9 bits (74), Expect = 1.5
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 15 EQAEDVEVPKALGDLFESVAGAIFLDSGMSL 45
E+ ED+ PK + D+FE++ GAI+LD+ S+
Sbjct: 115 EKREDIR-PKVIADVFEAICGAIYLDTEESI 144
>UniRef50_Q3AVE8 Cluster: NHL repeat; n=6; Cyanobacteria|Rep: NHL
repeat - Synechococcus sp. (strain CC9902)
Length = 673
Score = 33.5 bits (73), Expect = 2.0
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 3 GRQHYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGREL-- 60
G HYLI +V+ L L E+V G + ++ ++G+VW + +L G +L
Sbjct: 87 GTIHYLIASGGTVNKSNVDRLSMLTVLDETVNGEVAINERTTVGSVWPNAQQLKGNQLIG 146
Query: 61 EAFSAAAPKSPVRELLEAEPDTAKFGK 87
+ A VR L+ + T +FGK
Sbjct: 147 SKNALAIGSGHVRHLV--DQSTGQFGK 171
>UniRef50_Q6SFI8 Cluster: Ribonuclease III; n=2; Bacteria|Rep:
Ribonuclease III - uncultured bacterium 580
Length = 231
Score = 33.5 bits (73), Expect = 2.0
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 23 PKALGDLFESVAGAIFLDSGM--SLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLEAE 79
P L D FE++ GAIF+D GM + + SY L+ + PK+ ++E L+A+
Sbjct: 109 PSILADAFEALIGAIFIDGGMKSAYKFIEDSYADLIEKINPKEIYKDPKTILQEFLQAQ 167
>UniRef50_Q0RZL2 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 168
Score = 33.5 bits (73), Expect = 2.0
Identities = 16/32 (50%), Positives = 17/32 (53%)
Query: 121 GTAARCALRHLRRGRCSARPPPHTHSPYHDVQ 152
GT AR A RH RR RPP H+H H Q
Sbjct: 5 GTTARAARRHRRRREEPLRPPHHSHRGDHPQQ 36
>UniRef50_A6SBX3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1842
Score = 33.1 bits (72), Expect = 2.7
Identities = 38/120 (31%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 23 PKALGDLFESVAGAIFLDSGMSLGAVWKSYG---RLMGRELEAFSAAAPKSP---VRELL 76
PK L D+ E+ GAIF+DS G V K + R ++ + A K P + L
Sbjct: 1680 PKCLPDIVEAFIGAIFVDSEYDYGEVEKFFEMHIRWYFEDMGIYDTYANKHPTTFLTNFL 1739
Query: 77 EAE---PDTAKFGKPERLADGRR-VRVC-VEXXXXXXXXXXXXNYRIAKGTAARCALRHL 131
+ D A K DGR+ V VC V + R A+ AAR ALR L
Sbjct: 1740 QKNMGCEDWAPVSKEVPGEDGRKNVVVCGVIIHNKVVSTATAESMRYARVGAARNALRKL 1799
>UniRef50_A2WR94 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 256
Score = 32.7 bits (71), Expect = 3.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 18 EDVEVPKALGDLFESVAGAIFLDSGMSLGAVWK 50
+ +E P+ L D+ E++ GA++LDS + L + K
Sbjct: 144 DPIEGPRVLADIVEAIVGAVYLDSKLDLEVLQK 176
>UniRef50_A7I5W5 Cluster: Ribonuclease III; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribonuclease III -
Methanoregula boonei (strain 6A8)
Length = 196
Score = 32.7 bits (71), Expect = 3.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 26 LGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLEAEP 80
L D E++ GA++LDS SLG V + G + EL + + P RE + P
Sbjct: 124 LADTVEAIIGAVYLDSDASLGVVRQCIGAWLEPEL---ARVRREEPPREKVRVPP 175
>UniRef50_A5UJK3 Cluster: Ribonuclease III (DsRNA-specific), Rnc;
n=1; Methanobrevibacter smithii ATCC 35061|Rep:
Ribonuclease III (DsRNA-specific), Rnc -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 223
Score = 32.7 bits (71), Expect = 3.5
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 5 QHYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGM 43
+H I+ D+ + E+ EV D+FES GAIFLD G+
Sbjct: 91 KHIKIYGDDSKITEN-EVLSITADVFESFLGAIFLDQGI 128
>UniRef50_Q2Y6X8 Cluster: Putative uncharacterized protein; n=1;
Nitrosospira multiformis ATCC 25196|Rep: Putative
uncharacterized protein - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 314
Score = 32.3 bits (70), Expect = 4.7
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 8 LIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGR-LMGRELEAFSAA 66
+I +E E+A +E + G S AG I + ++SYG GRE SAA
Sbjct: 198 IIELNERERAHKLETLREYG----SRAGGILQQE---VEDAFRSYGEEAFGREYLYASAA 250
Query: 67 APKSPVRELLEAEPDTAKFGKPERLADGR 95
K P R L+ +P G+ +R+ADGR
Sbjct: 251 RGKEPERNFLQQKPFYEIRGE-QRVADGR 278
>UniRef50_Q9FKF0 Cluster: Emb|CAB88120.1; n=1; Arabidopsis
thaliana|Rep: Emb|CAB88120.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 957
Score = 32.3 bits (70), Expect = 4.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 20 VEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLM 56
V+ PK L D ES+A +F+D + +W+ + L+
Sbjct: 120 VKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLL 156
>UniRef50_P0C5H7 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent
helicase dcl2 (EC 3.6.1.-)]; n=15; Eurotiomycetidae|Rep:
Dicer-like protein 2 [Includes: Endoribonuclease dcl2 (EC
3.1.26.-); ATP-dependent helicase dcl2 (EC 3.6.1.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 1429
Score = 32.3 bits (70), Expect = 4.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 20 VEVPKALGDLFESVAGAIFLDSGMSLGA 47
+ K D+ ES+ GAIF+DSG LGA
Sbjct: 1228 IHADKFFSDVVESIIGAIFVDSGGDLGA 1255
>UniRef50_Q8FNE7 Cluster: Putative ABC transporter ATP-binding
protein; n=5; Corynebacterium|Rep: Putative ABC
transporter ATP-binding protein - Corynebacterium
efficiens
Length = 621
Score = 31.9 bits (69), Expect = 6.2
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 35 GAIFLDSGMSLGAVWKS--YGRLMGRELEAFSAAAPKSPVRELLEAEP---DTAKFGKPE 89
G +F D+ + G++ ++ YGR G L+ A A K+ E +EA P DT +
Sbjct: 437 GVVFQDASLFSGSIAENIAYGR-PGASLDEIVAVAKKANAHEFIEAFPDGYDTVIGERGL 495
Query: 90 RLADGRRVRVCV 101
+L+ G++ RV V
Sbjct: 496 KLSGGQKQRVAV 507
>UniRef50_Q8EW40 Cluster: Ribonuclease III; n=1; Mycoplasma
penetrans|Rep: Ribonuclease III - Mycoplasma penetrans
Length = 244
Score = 31.9 bits (69), Expect = 6.2
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 21 EVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAP---KSPVRELLE 77
+ K DLFE+ AGAIF+D G VWK + + + E P KS ++EL +
Sbjct: 118 DTKKIKADLFEAFAGAIFIDKGED--EVWKYLEKTILKYYENNELVNPIDYKSRIQELFQ 175
>UniRef50_Q3JSH2 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 3293
Score = 31.9 bits (69), Expect = 6.2
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 79 EPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCA-LRHLRR 133
EP A+ P R ADGRRV+ VE +R+ +G R A +RH+ R
Sbjct: 252 EPGAAQVQFPRR-ADGRRVQRRVEHVQSQVRDRVADRHRVGRGVVGRAAPVRHVDR 306
>UniRef50_A5UYV6 Cluster: Cobalt transport protein; n=2;
Roseiflexus|Rep: Cobalt transport protein - Roseiflexus
sp. RS-1
Length = 261
Score = 31.9 bits (69), Expect = 6.2
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 27 GDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVREL 75
G + + + G + L S + +GA+ ++ R M E AF+A PK+ +R++
Sbjct: 182 GSVLQRIRGVVPLVSPLIVGALIEAEERAMAIESRAFNAPGPKTWIRDI 230
>UniRef50_A6QZ52 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1359
Score = 31.9 bits (69), Expect = 6.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 23 PKALGDLFESVAGAIFLDSGMSLGAV---WKSYGRLMGRELEAFSAAAPKSP 71
PK L D+ E+ GAIF+DS S V ++ Y + ++ + A A K P
Sbjct: 1228 PKCLPDMLEAYIGAIFVDSNFSFEVVEDFFQRYLKQYFEDMSIYDAFANKHP 1279
>UniRef50_A3X4P1 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. MED193|Rep: Putative uncharacterized
protein - Roseobacter sp. MED193
Length = 290
Score = 31.5 bits (68), Expect = 8.1
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 47 AVWKSYGRLMGRELEAFSAA--APKSPVRELLEAEPDTAKF 85
AVW + + +E+E A A K P+ E +E PDT KF
Sbjct: 7 AVWDAGPEAVAKEIERIQAEMLAEKLPMAERIEINPDTGKF 47
>UniRef50_A1T425 Cluster: Type IV secretory pathway VirB4
components-like; n=1; Mycobacterium vanbaalenii
PYR-1|Rep: Type IV secretory pathway VirB4
components-like - Mycobacterium vanbaalenii (strain DSM
7251 / PYR-1)
Length = 1633
Score = 31.5 bits (68), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 44 SLGAVWKSYGRLMGRELEAFSAAAPKSPVRELLEAEPDTA 83
S G +W YG R+ F+ A +S + +LL +P+TA
Sbjct: 664 SEGRIWSLYGGSATRDQSGFADEALRSVITQLLTLQPETA 703
>UniRef50_A0UPZ7 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 592
Score = 31.5 bits (68), Expect = 8.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 53 GRLMGRELEAFSAAAPKSPVRELLEAEPDTAKFGKPERLADGRRVR 98
GRL R+ + AAP+ VR + + A G P+R A G++VR
Sbjct: 212 GRLRARQAAVGARAAPRQAVRAV---DRSAASVGDPQRAASGQQVR 254
>UniRef50_Q5K7D9 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1280
Score = 31.5 bits (68), Expect = 8.1
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 37 IFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKSPVR---ELLEAEPDTAKFGKPER 90
++ SGM WK GR +GR + F A+ +SPV+ +E EP F R
Sbjct: 484 VWTSSGMEDVVRWKDVGRRVGRLDKVFDGASYRSPVQAGGAGMEREPGRVAFASSPR 540
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,621,528
Number of Sequences: 1657284
Number of extensions: 5588736
Number of successful extensions: 14706
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 14647
Number of HSP's gapped (non-prelim): 69
length of query: 152
length of database: 575,637,011
effective HSP length: 94
effective length of query: 58
effective length of database: 419,852,315
effective search space: 24351434270
effective search space used: 24351434270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 68 (31.5 bits)
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