Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001835-TA|BGIBMGA001835-PA|IPR001159|Double-stranded RNA
binding, IPR000999|Ribonuclease III
(152 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase K... 132 6e-31
AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein. 132 6e-31
AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein. 132 6e-31
X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein. 29 6.6
M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA ... 29 6.6
L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein. 29 6.6
DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1,... 29 6.6
BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1,... 29 6.6
BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1,... 29 6.6
BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1,... 29 6.6
BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1,... 29 6.6
AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein. 29 6.6
>AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase
K12H4.8-like protein protein.
Length = 1912
Score = 132 bits (318), Expect = 6e-31
Identities = 68/122 (55%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 11 EDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKS 70
E++ E+ ED+EVPKA+GD+FES+AGAI++DSGMSL VW+ Y +M +E FSA P+S
Sbjct: 1783 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRS 1842
Query: 71 PVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRH 130
PVRELLE EP+TAKF ER DG +VRV VE +YRIAK AAR ALR
Sbjct: 1843 PVRELLEMEPETAKFSPAERTYDG-KVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRS 1901
Query: 131 LR 132
L+
Sbjct: 1902 LK 1903
>AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein.
Length = 1924
Score = 132 bits (318), Expect = 6e-31
Identities = 68/122 (55%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 11 EDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKS 70
E++ E+ ED+EVPKA+GD+FES+AGAI++DSGMSL VW+ Y +M +E FSA P+S
Sbjct: 1795 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRS 1854
Query: 71 PVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRH 130
PVRELLE EP+TAKF ER DG +VRV VE +YRIAK AAR ALR
Sbjct: 1855 PVRELLEMEPETAKFSPAERTYDG-KVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRS 1913
Query: 131 LR 132
L+
Sbjct: 1914 LK 1915
>AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein.
Length = 1922
Score = 132 bits (318), Expect = 6e-31
Identities = 68/122 (55%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 11 EDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYGRLMGRELEAFSAAAPKS 70
E++ E+ ED+EVPKA+GD+FES+AGAI++DSGMSL VW+ Y +M +E FSA P+S
Sbjct: 1793 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRS 1852
Query: 71 PVRELLEAEPDTAKFGKPERLADGRRVRVCVEXXXXXXXXXXXXNYRIAKGTAARCALRH 130
PVRELLE EP+TAKF ER DG +VRV VE +YRIAK AAR ALR
Sbjct: 1853 PVRELLEMEPETAKFSPAERTYDG-KVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRS 1911
Query: 131 LR 132
L+
Sbjct: 1912 LK 1913
>X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein.
Length = 282
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 RLMGRELEAFSAAAPKSPVRELLEAEP 80
R++G + AAAP SP R+LL+ P
Sbjct: 10 RVLGSSVAGLRAAAPASPFRQLLQPAP 36
>M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA
splicing factor SF2p32, complete sequence. ).
Length = 278
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 RLMGRELEAFSAAAPKSPVRELLEAEP 80
R++G + AAAP SP R+LL+ P
Sbjct: 6 RVLGSSVAGLRAAAPASPFRQLLQPAP 32
>L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein.
Length = 282
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 RLMGRELEAFSAAAPKSPVRELLEAEP 80
R++G + AAAP SP R+LL+ P
Sbjct: 10 RVLGSSVAGLRAAAPASPFRQLLQPAP 36
>DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1,
q subcomponent binding protein protein.
Length = 282
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 RLMGRELEAFSAAAPKSPVRELLEAEP 80
R++G + AAAP SP R+LL+ P
Sbjct: 10 RVLGSSVAGLRAAAPASPFRQLLQPAP 36
>BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1,
q subcomponent binding protein protein.
Length = 282
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 RLMGRELEAFSAAAPKSPVRELLEAEP 80
R++G + AAAP SP R+LL+ P
Sbjct: 10 RVLGSSVAGLRAAAPASPFRQLLQPAP 36
>BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1,
q subcomponent binding protein protein.
Length = 282
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 RLMGRELEAFSAAAPKSPVRELLEAEP 80
R++G + AAAP SP R+LL+ P
Sbjct: 10 RVLGSSVAGLRAAAPASPFRQLLQPAP 36
>BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1,
q subcomponent binding protein protein.
Length = 282
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 RLMGRELEAFSAAAPKSPVRELLEAEP 80
R++G + AAAP SP R+LL+ P
Sbjct: 10 RVLGSSVAGLRAAAPASPFRQLLQPAP 36
>BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1,
q subcomponent binding protein protein.
Length = 282
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 RLMGRELEAFSAAAPKSPVRELLEAEP 80
R++G + AAAP SP R+LL+ P
Sbjct: 10 RVLGSSVAGLRAAAPASPFRQLLQPAP 36
>AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein.
Length = 282
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 RLMGRELEAFSAAAPKSPVRELLEAEP 80
R++G + AAAP SP R+LL+ P
Sbjct: 10 RVLGSSVAGLRAAAPASPFRQLLQPAP 36
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,927,176
Number of Sequences: 224733
Number of extensions: 697665
Number of successful extensions: 1361
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1346
Number of HSP's gapped (non-prelim): 12
length of query: 152
length of database: 73,234,838
effective HSP length: 84
effective length of query: 68
effective length of database: 54,357,266
effective search space: 3696294088
effective search space used: 3696294088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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