Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001834-TA|BGIBMGA001834-PA|IPR000999|Ribonuclease III
(157 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q86MA9 Cluster: Dicer-1; n=5; Coelomata|Rep: Dicer-1 - ... 213 1e-54
UniRef50_Q9VCU9 Cluster: Endoribonuclease Dcr-1; n=18; Sophophor... 212 3e-54
UniRef50_UPI00015B5D4A Cluster: PREDICTED: similar to dicer-1; n... 209 2e-53
UniRef50_UPI0000DB7B4D Cluster: PREDICTED: similar to Dicer-1 CG... 204 5e-52
UniRef50_Q17KP3 Cluster: Dicer-1; n=2; Aedes aegypti|Rep: Dicer-... 204 5e-52
UniRef50_UPI0000D5738B Cluster: PREDICTED: similar to CG4792-PA;... 203 2e-51
UniRef50_Q9UPY3 Cluster: Endoribonuclease Dicer; n=50; Eumetazoa... 167 1e-40
UniRef50_UPI0000586635 Cluster: PREDICTED: similar to Dicer prot... 159 2e-38
UniRef50_P34529 Cluster: Endoribonuclease dcr-1; n=2; Caenorhabd... 148 6e-35
UniRef50_UPI0000DB7B59 Cluster: PREDICTED: similar to Dicer-1 CG... 136 2e-31
UniRef50_Q174T8 Cluster: Dicer-1; n=3; Culicidae|Rep: Dicer-1 - ... 136 3e-31
UniRef50_UPI00015B633C Cluster: PREDICTED: similar to dicer-1; n... 126 2e-28
UniRef50_Q95YG3 Cluster: Double-strand-specific ribonuclease; n=... 124 1e-27
UniRef50_Q9SP32 Cluster: Endoribonuclease Dicer homolog; n=8; Em... 115 4e-25
UniRef50_Q9M9P8 Cluster: T17B22.1 protein; n=13; Eukaryota|Rep: ... 113 2e-24
UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA;... 111 7e-24
UniRef50_Q2HTA7 Cluster: Helicase, C-terminal; Argonaute and Dic... 110 2e-23
UniRef50_A7SIA4 Cluster: Predicted protein; n=1; Nematostella ve... 109 3e-23
UniRef50_A7PXV4 Cluster: Chromosome chr15 scaffold_37, whole gen... 108 5e-23
UniRef50_Q0IWV3 Cluster: Os10g0485600 protein; n=7; Eukaryota|Re... 106 3e-22
UniRef50_A7PV34 Cluster: Chromosome chr4 scaffold_32, whole geno... 106 3e-22
UniRef50_A3A0R6 Cluster: Putative uncharacterized protein; n=4; ... 103 1e-21
UniRef50_A7P4V9 Cluster: Chromosome chr4 scaffold_6, whole genom... 102 3e-21
UniRef50_Q10HL3 Cluster: Type III restriction enzyme, res subuni... 101 6e-21
UniRef50_Q0E5R5 Cluster: Putative dicer-like protein; n=1; Mucor... 96 4e-19
UniRef50_Q9LXW7 Cluster: Putative uncharacterized protein T15B3_... 90 2e-17
UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|... 86 3e-16
UniRef50_P84634 Cluster: Dicer-like protein 4; n=1; Arabidopsis ... 86 3e-16
UniRef50_Q01HF5 Cluster: OSIGBa0157K09-H0214G12.2 protein; n=4; ... 86 4e-16
UniRef50_A7LFZ6 Cluster: Dicer-like protein; n=2; Oryza sativa (... 86 4e-16
UniRef50_A7PX71 Cluster: Chromosome chr12 scaffold_36, whole gen... 83 2e-15
UniRef50_O23395 Cluster: UFD1 like protein; n=8; Magnoliophyta|R... 78 1e-13
UniRef50_Q1DKI1 Cluster: Dicer-like protein 1 [Includes: Endorib... 78 1e-13
UniRef50_Q69KJ0 Cluster: CAF protein-like; n=2; Oryza sativa|Rep... 77 2e-13
UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core eu... 75 1e-12
UniRef50_A2RAF3 Cluster: Dicer-like protein 1 [Includes: Endorib... 75 1e-12
UniRef50_A4RKC3 Cluster: Dicer-like protein 1 [Includes: Endorib... 73 4e-12
UniRef50_A6LNE7 Cluster: Ribonuclease III; n=1; Thermosipho mela... 72 5e-12
UniRef50_A2Y2L5 Cluster: Putative uncharacterized protein; n=2; ... 71 1e-11
UniRef50_Q09884 Cluster: Protein Dicer (Cell cycle control prote... 71 1e-11
UniRef50_A6QZ52 Cluster: Predicted protein; n=1; Ajellomyces cap... 69 6e-11
UniRef50_O67082 Cluster: Ribonuclease 3; n=1; Aquifex aeolicus|R... 69 6e-11
UniRef50_UPI0000E0E146 Cluster: ribonuclease III; n=1; alpha pro... 68 8e-11
UniRef50_A1C9M6 Cluster: Dicer-like protein 2 [Includes: Endorib... 68 1e-10
UniRef50_UPI000023D196 Cluster: hypothetical protein FG04408.1; ... 67 1e-10
UniRef50_Q0UL22 Cluster: Dicer-like protein 2 [Includes: Endorib... 67 1e-10
UniRef50_Q92JB0 Cluster: Ribonuclease 3; n=8; Rickettsia|Rep: Ri... 66 3e-10
UniRef50_Q2VF18 Cluster: Dicer-like protein 2 [Includes: Endorib... 66 3e-10
UniRef50_Q5F9X7 Cluster: Ribonuclease 3; n=5; Betaproteobacteria... 65 6e-10
UniRef50_A1APX0 Cluster: Ribonuclease III; n=1; Pelobacter propi... 65 8e-10
UniRef50_A2QX45 Cluster: Dicer-like protein 2-2 [Includes: Endor... 65 8e-10
UniRef50_A4XJW5 Cluster: Ribonuclease III; n=1; Caldicellulosiru... 64 1e-09
UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n... 64 2e-09
UniRef50_A5CEW8 Cluster: Ribonuclease III; n=1; Orientia tsutsug... 63 2e-09
UniRef50_Q6BCJ7 Cluster: Dicer-related RNase III protein Dcl1p; ... 63 2e-09
UniRef50_P0C5H7 Cluster: Dicer-like protein 2 [Includes: Endorib... 63 2e-09
UniRef50_A7EYF3 Cluster: Putative uncharacterized protein; n=1; ... 63 3e-09
UniRef50_A6SBX3 Cluster: Putative uncharacterized protein; n=1; ... 62 4e-09
UniRef50_Q5NER3 Cluster: Ribonuclease 3; n=11; Francisella tular... 62 7e-09
UniRef50_A1DE13 Cluster: Dicer-like protein 1 [Includes: Endorib... 62 7e-09
UniRef50_Q67PF5 Cluster: Ribonuclease 3; n=1; Symbiobacterium th... 61 1e-08
UniRef50_Q88WK0 Cluster: Ribonuclease 3; n=5; Lactobacillales|Re... 61 1e-08
UniRef50_Q0F3I4 Cluster: Ribonuclease III; n=1; Mariprofundus fe... 61 1e-08
UniRef50_Q2U0L3 Cluster: DsRNA-specific nuclease Dicer and relat... 60 2e-08
UniRef50_Q1DW80 Cluster: Dicer-like protein 2 [Includes: Endorib... 60 2e-08
UniRef50_Q9FKF0 Cluster: Emb|CAB88120.1; n=1; Arabidopsis thalia... 60 3e-08
UniRef50_A6R2T0 Cluster: Predicted protein; n=1; Ajellomyces cap... 60 3e-08
UniRef50_Q8RGX3 Cluster: Ribonuclease 3; n=3; Fusobacterium nucl... 60 3e-08
UniRef50_Q9KA05 Cluster: Ribonuclease 3; n=38; Bacilli|Rep: Ribo... 60 3e-08
UniRef50_Q2VF19 Cluster: Dicer-like protein 1 [Includes: Endorib... 60 3e-08
UniRef50_A0LGM1 Cluster: Ribonuclease III; n=1; Syntrophobacter ... 59 4e-08
UniRef50_A6SDY7 Cluster: Putative uncharacterized protein; n=1; ... 59 4e-08
UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio bacte... 59 4e-08
UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121; Proteobacteria|R... 59 5e-08
UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27; Epsilonproteobact... 59 5e-08
UniRef50_Q7WD32 Cluster: Ribonuclease 3; n=62; Proteobacteria|Re... 59 5e-08
UniRef50_Q7S8J7 Cluster: Dicer-like protein 1 [Includes: Endorib... 59 5e-08
UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus h... 58 7e-08
UniRef50_Q2GNP6 Cluster: Putative uncharacterized protein; n=1; ... 58 9e-08
UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2; Chlor... 58 1e-07
UniRef50_Q6ANV0 Cluster: Ribonuclease 3; n=1; Desulfotalea psych... 58 1e-07
UniRef50_Q7UGZ7 Cluster: Ribonuclease 3; n=3; Planctomycetaceae|... 57 2e-07
UniRef50_Q7SCC1 Cluster: Dicer-like protein 2 [Includes: Endorib... 57 2e-07
UniRef50_Q0UI93 Cluster: Dicer-like protein 1 [Includes: Endorib... 57 2e-07
UniRef50_Q98R47 Cluster: RIBONUCLEASE III; n=1; Mycoplasma pulmo... 57 2e-07
UniRef50_Q1Q4S0 Cluster: Similar to ribonuclease III; n=1; Candi... 57 2e-07
UniRef50_Q8XJN8 Cluster: Ribonuclease 3; n=20; Bacteria|Rep: Rib... 57 2e-07
UniRef50_Q2GCL4 Cluster: Ribonuclease III; n=1; Neorickettsia se... 56 3e-07
UniRef50_Q0YHA5 Cluster: Ribonuclease III; n=1; Geobacter sp. FR... 56 3e-07
UniRef50_A1AWQ6 Cluster: Ribonuclease III; n=2; sulfur-oxidizing... 56 3e-07
UniRef50_A0L633 Cluster: Ribonuclease III; n=1; Magnetococcus sp... 56 3e-07
UniRef50_Q72C44 Cluster: Ribonuclease 3; n=4; Desulfovibrionacea... 56 3e-07
UniRef50_A6C1C3 Cluster: Ribonuclease III; n=1; Planctomyces mar... 56 4e-07
UniRef50_Q74AX1 Cluster: Ribonuclease 3; n=4; Geobacter|Rep: Rib... 56 4e-07
UniRef50_A7B5M4 Cluster: Putative uncharacterized protein; n=1; ... 55 6e-07
UniRef50_A5EV51 Cluster: Ribonuclease III; n=1; Dichelobacter no... 55 6e-07
UniRef50_A4J683 Cluster: Ribonuclease III; n=1; Desulfotomaculum... 55 6e-07
UniRef50_Q5FJJ7 Cluster: Ribonuclease 3; n=8; Lactobacillus|Rep:... 55 6e-07
UniRef50_Q97IA4 Cluster: Ribonuclease 3; n=3; Clostridium|Rep: R... 55 6e-07
UniRef50_Q2H0G2 Cluster: Dicer-like protein 1 [Includes: Endorib... 55 6e-07
UniRef50_Q1JXG8 Cluster: Ribonuclease III; n=1; Desulfuromonas a... 55 8e-07
UniRef50_Q6BCJ9 Cluster: Dicer-related RNase III protein Dcr2p; ... 55 8e-07
UniRef50_A1HN82 Cluster: Ribonuclease III; n=4; Clostridia|Rep: ... 54 1e-06
UniRef50_A0NL28 Cluster: Ribonuclease III; n=3; Leuconostocaceae... 54 1e-06
UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp. ... 54 1e-06
UniRef50_A6PN64 Cluster: Ribonuclease III; n=1; Victivallis vade... 54 1e-06
UniRef50_Q5L6E3 Cluster: Ribonuclease 3; n=8; Chlamydiaceae|Rep:... 54 1e-06
UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:... 54 2e-06
UniRef50_A1WT17 Cluster: Ribonuclease III; n=2; Gammaproteobacte... 53 3e-06
UniRef50_A6DSV3 Cluster: Ribonuclease III; n=1; Lentisphaera ara... 53 3e-06
UniRef50_Q7KNF1 Cluster: Ribonuclease; n=8; Coelomata|Rep: Ribon... 53 3e-06
UniRef50_P51837 Cluster: Ribonuclease 3; n=5; Gammaproteobacteri... 53 3e-06
UniRef50_Q6SFI8 Cluster: Ribonuclease III; n=2; Bacteria|Rep: Ri... 52 4e-06
UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|R... 52 4e-06
UniRef50_Q9PB98 Cluster: Ribonuclease 3; n=14; Gammaproteobacter... 52 4e-06
UniRef50_Q5P9U8 Cluster: Ribonuclease 3; n=2; Anaplasma|Rep: Rib... 52 4e-06
UniRef50_A4RHU9 Cluster: Dicer-like protein 2 [Includes: Endorib... 52 4e-06
UniRef50_Q556G5 Cluster: Putative uncharacterized protein; n=2; ... 52 6e-06
UniRef50_Q6LX27 Cluster: Ribonuclease III family:Double-stranded... 52 6e-06
UniRef50_Q98514 Cluster: Putative protein A464R; n=6; Chloroviru... 52 6e-06
UniRef50_UPI00015B6129 Cluster: PREDICTED: similar to ribonuclea... 52 8e-06
UniRef50_Q0LPI7 Cluster: Ribonuclease III; n=1; Herpetosiphon au... 51 1e-05
UniRef50_A3VSG4 Cluster: Ribonuclease III; n=1; Parvularcula ber... 51 1e-05
UniRef50_A0WD16 Cluster: Ribonuclease III; n=1; Geobacter lovley... 51 1e-05
UniRef50_Q97QG6 Cluster: Ribonuclease 3; n=46; Lactobacillales|R... 51 1e-05
UniRef50_Q8EW40 Cluster: Ribonuclease III; n=1; Mycoplasma penet... 51 1e-05
UniRef50_A0YTE9 Cluster: Ribonuclease III; n=1; Lyngbya sp. PCC ... 51 1e-05
UniRef50_A5UJK3 Cluster: Ribonuclease III (DsRNA-specific), Rnc;... 51 1e-05
UniRef50_O51648 Cluster: Ribonuclease 3; n=3; Borrelia burgdorfe... 51 1e-05
UniRef50_A1U2V5 Cluster: Ribonuclease III; n=5; Bacteria|Rep: Ri... 50 2e-05
UniRef50_Q53844 Cluster: Ribonuclease 3; n=2; Spiroplasma citri|... 50 2e-05
UniRef50_O01326 Cluster: Ribonuclease 3; n=2; Caenorhabditis|Rep... 50 2e-05
UniRef50_Q67B98 Cluster: Ribonuclease III-like protein; n=2; Mur... 50 2e-05
UniRef50_A4E6T0 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_A2WR94 Cluster: Putative uncharacterized protein; n=3; ... 50 2e-05
UniRef50_Q9NRR4 Cluster: Ribonuclease 3; n=59; Eumetazoa|Rep: Ri... 50 2e-05
UniRef50_Q7VRR0 Cluster: Ribonuclease 3; n=4; Gammaproteobacteri... 50 2e-05
UniRef50_A0NMB9 Cluster: Ribonuclease III; n=1; Stappia aggregat... 50 3e-05
UniRef50_Q5GTI3 Cluster: Ribonuclease 3; n=26; Rickettsiales|Rep... 50 3e-05
UniRef50_Q4FUV6 Cluster: Ribonuclease 3; n=6; Gammaproteobacteri... 50 3e-05
UniRef50_A5E7T6 Cluster: Putative uncharacterized protein; n=1; ... 49 4e-05
UniRef50_Q8Z023 Cluster: Ribonuclease 3; n=6; Cyanobacteria|Rep:... 49 4e-05
UniRef50_Q6BX76 Cluster: Similar to CA1420|CaRNT1 Candida albica... 49 5e-05
UniRef50_Q3ZXY9 Cluster: Ribonuclease 3; n=3; Dehalococcoides|Re... 49 5e-05
UniRef50_Q3VWC5 Cluster: Ribonuclease III; n=1; Prosthecochloris... 48 7e-05
UniRef50_Q190G5 Cluster: Ribonuclease III; n=3; Peptococcaceae|R... 48 7e-05
UniRef50_A4GK15 Cluster: Ribonuclease III; n=1; uncultured marin... 48 7e-05
UniRef50_A3EQH6 Cluster: DsRNA-specific ribonuclease; n=1; Lepto... 48 7e-05
UniRef50_Q6N6C1 Cluster: Ribonuclease 3; n=14; Rhizobiales|Rep: ... 48 7e-05
UniRef50_Q3A4Q8 Cluster: Ribonuclease 3; n=1; Pelobacter carbino... 48 7e-05
UniRef50_Q4A589 Cluster: Ribonuclease 3; n=1; Mycoplasma synovia... 48 7e-05
UniRef50_Q6F1N5 Cluster: Ribonuclease 3; n=4; Mollicutes|Rep: Ri... 48 7e-05
UniRef50_A2ST26 Cluster: Ribonuclease III; n=1; Methanocorpuscul... 48 1e-04
UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria (c... 48 1e-04
UniRef50_Q2LVR4 Cluster: Ribonuclease III; n=1; Syntrophus acidi... 48 1e-04
UniRef50_Q1IJU6 Cluster: Ribonuclease III; n=1; Acidobacteria ba... 48 1e-04
UniRef50_A4A3U5 Cluster: Ribonuclease III; n=1; Congregibacter l... 48 1e-04
UniRef50_Q55FS1 Cluster: Putative RNase III; n=1; Dictyostelium ... 48 1e-04
UniRef50_Q6FQ28 Cluster: Candida glabrata strain CBS138 chromoso... 48 1e-04
UniRef50_A3LS79 Cluster: Predicted protein; n=1; Pichia stipitis... 48 1e-04
UniRef50_Q8KAN7 Cluster: Ribonuclease 3; n=9; Chlorobiaceae|Rep:... 48 1e-04
UniRef50_Q1NXA7 Cluster: Ribonuclease III; n=2; delta proteobact... 47 2e-04
UniRef50_Q648X5 Cluster: Ribonuclease III; n=3; environmental sa... 47 2e-04
UniRef50_Q1FET5 Cluster: Ribonuclease III; n=1; Clostridium phyt... 47 2e-04
UniRef50_Q0AYW0 Cluster: Ribonuclease III; n=1; Syntrophomonas w... 47 2e-04
UniRef50_Q3SE71 Cluster: Ribonuclease with two RNaseIII domains;... 47 2e-04
UniRef50_A4R7T3 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-04
UniRef50_A6RQB2 Cluster: Putative uncharacterized protein; n=1; ... 46 3e-04
UniRef50_A5DC21 Cluster: Putative uncharacterized protein; n=1; ... 46 3e-04
UniRef50_Q6MEK1 Cluster: Ribonuclease 3; n=1; Candidatus Protoch... 46 3e-04
UniRef50_Q6A7R5 Cluster: Ribonuclease III; n=2; Actinomycetales|... 46 4e-04
UniRef50_Q1YS28 Cluster: Ribonuclease III; n=1; gamma proteobact... 46 4e-04
UniRef50_Q9PQT8 Cluster: Ribonuclease 3; n=1; Ureaplasma parvum|... 46 4e-04
UniRef50_A5IYM8 Cluster: Ribonuclease III; n=1; Mycoplasma agala... 46 5e-04
UniRef50_Q9KPB2 Cluster: Ribonuclease 3; n=22; Gammaproteobacter... 46 5e-04
UniRef50_Q4A7X2 Cluster: Ribonuclease III; n=3; Mycoplasma hyopn... 45 7e-04
UniRef50_A0ZZX0 Cluster: Ribonuclease III; n=2; Bifidobacterium ... 45 7e-04
UniRef50_Q5UQT7 Cluster: Probable ribonuclease 3; n=1; Acanthamo... 45 7e-04
UniRef50_A2SDH3 Cluster: Ribonuclease III; n=1; Methylibium petr... 45 9e-04
UniRef50_Q31HP3 Cluster: Ribonuclease III; n=2; Gammaproteobacte... 44 0.001
UniRef50_Q0C3T9 Cluster: Ribonuclease III; n=1; Hyphomonas neptu... 44 0.001
UniRef50_A6EDW5 Cluster: Ribonuclease III; n=1; Pedobacter sp. B... 44 0.001
UniRef50_A3EU88 Cluster: DsRNA-specific ribonuclease; n=1; Lepto... 44 0.001
UniRef50_A1WMW1 Cluster: Ribonuclease III; n=1; Verminephrobacte... 44 0.001
UniRef50_Q8G7H1 Cluster: Ribonuclease 3; n=2; Bifidobacterium lo... 44 0.001
UniRef50_A7HCB5 Cluster: Ribonuclease III; n=3; Cystobacterineae... 44 0.002
UniRef50_Q4FLS9 Cluster: Ribonuclease 3; n=2; Candidatus Pelagib... 44 0.002
UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus Desul... 44 0.002
UniRef50_Q5A694 Cluster: Probable ribonuclease III; n=2; Candida... 44 0.002
UniRef50_Q6LMS2 Cluster: Ribonuclease 3; n=19; Gammaproteobacter... 44 0.002
UniRef50_A5ZF82 Cluster: Putative uncharacterized protein; n=2; ... 43 0.003
UniRef50_A4GHU1 Cluster: Ribonuclease III; n=1; uncultured marin... 43 0.003
UniRef50_A1ZI45 Cluster: Ribonuclease III; n=2; Flexibacteraceae... 43 0.003
UniRef50_Q57E81 Cluster: Ribonuclease 3; n=19; Rhizobiales|Rep: ... 43 0.003
UniRef50_A4U1G9 Cluster: Ribonuclease III; n=2; Magnetospirillum... 43 0.004
UniRef50_A6R9C5 Cluster: Predicted protein; n=1; Ajellomyces cap... 43 0.004
UniRef50_Q5LNK5 Cluster: Ribonuclease 3; n=28; Alphaproteobacter... 43 0.004
UniRef50_Q2S2W4 Cluster: Ribonuclease III; n=1; Salinibacter rub... 42 0.005
UniRef50_A7CV23 Cluster: Ribonuclease III; n=1; Opitutaceae bact... 42 0.005
UniRef50_A6GP51 Cluster: Ribonuclease III; n=1; Limnobacter sp. ... 42 0.005
UniRef50_Q8CPI1 Cluster: Ribonuclease 3; n=16; Staphylococcus|Re... 42 0.005
UniRef50_Q26GJ2 Cluster: Ribonuclease III (Rnase III), double-st... 42 0.006
UniRef50_A7LVV6 Cluster: Putative uncharacterized protein; n=1; ... 42 0.006
UniRef50_A1CZL8 Cluster: RNase3 domain protein; n=3; Trichocomac... 42 0.006
UniRef50_Q83I82 Cluster: Ribonuclease 3; n=3; Tropheryma whipple... 42 0.006
UniRef50_Q4AEV8 Cluster: Ribonuclease III; n=1; Chlorobium phaeo... 42 0.008
UniRef50_A3I0H3 Cluster: Putative ribonuclease III; n=1; Algorip... 42 0.008
UniRef50_Q9P6D6 Cluster: Related to Ribonuclease III; n=2; Sorda... 42 0.008
UniRef50_Q9A805 Cluster: Ribonuclease 3; n=4; Alphaproteobacteri... 42 0.008
UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usita... 41 0.011
UniRef50_A7I5W5 Cluster: Ribonuclease III; n=1; Candidatus Metha... 41 0.011
UniRef50_Q31MP4 Cluster: Ribonuclease III; n=2; Synechococcus el... 41 0.014
UniRef50_O32367 Cluster: Ribonuclease III; n=1; Campylobacter je... 41 0.014
UniRef50_A7DEA6 Cluster: Ribonuclease III; n=3; Alphaproteobacte... 41 0.014
UniRef50_A7I515 Cluster: Ribonuclease III; n=1; Candidatus Metha... 41 0.014
UniRef50_Q02555 Cluster: Ribonuclease 3; n=2; Saccharomyces cere... 41 0.014
UniRef50_Q9X0I6 Cluster: Ribonuclease 3; n=3; Thermotogaceae|Rep... 41 0.014
UniRef50_Q6KHN3 Cluster: Ribonuclease 3; n=1; Mycoplasma mobile|... 41 0.014
UniRef50_A4MAM8 Cluster: Ribonuclease III; n=1; Petrotoga mobili... 40 0.019
UniRef50_Q5KKA7 Cluster: Putative uncharacterized protein; n=2; ... 40 0.019
UniRef50_Q8A2E8 Cluster: Ribonuclease 3; n=6; Bacteroidales|Rep:... 40 0.019
UniRef50_Q7NAZ2 Cluster: Rnc; n=1; Mycoplasma gallisepticum|Rep:... 40 0.025
UniRef50_Q2RJX2 Cluster: Ribonuclease III; n=1; Moorella thermoa... 40 0.025
UniRef50_Q6CC90 Cluster: Similarities with sp|Q02555 Saccharomyc... 40 0.025
UniRef50_Q5AQL5 Cluster: ER lumen protein retaining receptor; n=... 40 0.025
UniRef50_Q820I0 Cluster: Ribonuclease 3; n=4; Proteobacteria|Rep... 40 0.025
UniRef50_Q6NGH3 Cluster: Ribonuclease 3; n=6; Corynebacterium|Re... 40 0.025
UniRef50_O83787 Cluster: Ribonuclease 3; n=1; Treponema pallidum... 40 0.033
UniRef50_Q7NH89 Cluster: Ribonuclease III; n=3; Cyanobacteria|Re... 39 0.044
UniRef50_Q7R2M2 Cluster: GLP_546_48378_50642; n=2; Giardia intes... 39 0.044
UniRef50_Q2U9V4 Cluster: Predicted protein; n=3; Eurotiomycetida... 39 0.044
UniRef50_Q6YPW7 Cluster: Ribonuclease 3; n=3; Candidatus Phytopl... 39 0.044
UniRef50_Q06VS3 Cluster: Ribonuclease III; n=1; Trichoplusia ni ... 39 0.058
UniRef50_A7BCY7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.058
UniRef50_Q5KKA8 Cluster: Putative uncharacterized protein; n=2; ... 39 0.058
UniRef50_Q3SE73 Cluster: Ribonuclease with two RNaseIII domains;... 38 0.077
UniRef50_A0DYG6 Cluster: Chromosome undetermined scaffold_7, who... 38 0.077
UniRef50_Q6FJM4 Cluster: Candida glabrata strain CBS138 chromoso... 38 0.077
UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema denticol... 38 0.077
UniRef50_P75233 Cluster: Ribonuclease 3; n=3; Mycoplasma|Rep: Ri... 38 0.077
UniRef50_Q0BTG2 Cluster: Ribonuclease III; n=4; Rhodospirillales... 38 0.10
UniRef50_Q1GTU3 Cluster: Ribonuclease III; n=1; Sphingopyxis ala... 38 0.13
UniRef50_A3CSF0 Cluster: Ribonuclease III; n=1; Methanoculleus m... 38 0.13
UniRef50_Q54EI2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.18
UniRef50_Q3SD86 Cluster: Dicer-like ribonuclease with helicase a... 37 0.18
UniRef50_Q6CIQ4 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 37 0.18
UniRef50_A7TI15 Cluster: Putative uncharacterized protein; n=1; ... 37 0.18
UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep: Ri... 37 0.18
UniRef50_P22192 Cluster: Double-strand-specific pac1 ribonucleas... 37 0.18
UniRef50_Q0UFS5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.31
UniRef50_A7F817 Cluster: Putative uncharacterized protein; n=1; ... 36 0.31
UniRef50_Q1D5X9 Cluster: Ribonuclease III; n=1; Myxococcus xanth... 36 0.54
UniRef50_A5Z824 Cluster: Putative uncharacterized protein; n=1; ... 36 0.54
UniRef50_Q54D34 Cluster: Putative uncharacterized protein rad17;... 36 0.54
UniRef50_Q8YPT4 Cluster: Ribonuclease III; n=8; Cyanobacteria|Re... 35 0.72
UniRef50_Q1XG54 Cluster: Similarity to ribonuclease III; n=1; Cr... 35 0.72
UniRef50_Q55637 Cluster: Uncharacterized protein slr0346; n=1; S... 35 0.72
UniRef50_Q7MU11 Cluster: Ribonuclease III; n=1; Porphyromonas gi... 35 0.95
UniRef50_UPI00006A9EC6 Cluster: hypothetical protein CHGG_04734;... 34 1.3
UniRef50_A6G995 Cluster: Ribonuclease III; n=1; Plesiocystis pac... 34 1.3
UniRef50_A5GQ81 Cluster: Ribonuclease III; n=1; Synechococcus sp... 34 1.3
UniRef50_A2F201 Cluster: RNase3 domain containing protein; n=1; ... 34 1.3
UniRef50_Q5KEY8 Cluster: Expressed protein; n=1; Filobasidiella ... 34 1.7
UniRef50_A3CRH2 Cluster: Ribonuclease III; n=2; Methanomicrobial... 34 1.7
UniRef50_Q3B0H4 Cluster: Ribonuclease III; n=2; Synechococcus|Re... 33 2.2
UniRef50_Q1AW81 Cluster: Ribonuclease III; n=1; Rubrobacter xyla... 33 2.2
UniRef50_A7LRU3 Cluster: Putative uncharacterized protein; n=1; ... 33 2.2
UniRef50_Q9N5M7 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q4SZJ8 Cluster: Chromosome undetermined SCAF11600, whol... 33 3.8
UniRef50_Q3E1W0 Cluster: Cell wall hydrolase/autolysin; n=2; Chl... 33 3.8
UniRef50_A6GY65 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q9FK13 Cluster: Gb|AAD26950.1; n=2; Arabidopsis thalian... 33 3.8
UniRef50_A7RVS0 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.8
UniRef50_A2E5R8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_A7TR32 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q9S338 Cluster: Ribonuclease III; n=1; Prochlorococcus ... 32 6.7
UniRef50_Q46IK9 Cluster: Ribonuclease III, bacterial; n=2; Proch... 32 6.7
UniRef50_A1ZN42 Cluster: Cytosol aminopeptidase; n=1; Microscill... 32 6.7
UniRef50_Q9N3Z2 Cluster: Putative uncharacterized protein Y39H10... 32 6.7
UniRef50_Q0USG2 Cluster: Putative uncharacterized protein; n=2; ... 32 6.7
UniRef50_A3DGH8 Cluster: Putative uncharacterized protein precur... 31 8.8
UniRef50_A0V3N3 Cluster: YD repeat protein; n=1; Clostridium cel... 31 8.8
UniRef50_P61243 Cluster: Protein ycf2; n=1; Physcomitrella paten... 31 8.8
>UniRef50_Q86MA9 Cluster: Dicer-1; n=5; Coelomata|Rep: Dicer-1 -
Anopheles gambiae (African malaria mosquito)
Length = 2259
Score = 213 bits (521), Expect = 1e-54
Identities = 98/126 (77%), Positives = 111/126 (88%)
Query: 7 RELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHL 66
R L G+E+ E+ L YRFRDRS LLQAMTHAS+ N LTDCYQRLEFLGDAILDYLITRHL
Sbjct: 1977 RLLQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHL 2036
Query: 67 YEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENG 126
YED+R HSPGALTDLRSALVNNTIFA+LA RHGFHKYF H+SPGL EV+ ++V+IQ+ENG
Sbjct: 2037 YEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENG 2096
Query: 127 HSISEE 132
H I+EE
Sbjct: 2097 HRITEE 2102
Score = 35.5 bits (78), Expect = 0.54
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 27 SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
+++LQA+T ++ + + + RLE +GD+ L Y IT +LY G L+ LRS V
Sbjct: 1665 AIILQALTMSNANDGINLE---RLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQV 1721
Query: 87 NNTIFATLAAR 97
+N L R
Sbjct: 1722 SNLNLYRLGRR 1732
>UniRef50_Q9VCU9 Cluster: Endoribonuclease Dcr-1; n=18;
Sophophora|Rep: Endoribonuclease Dcr-1 - Drosophila
melanogaster (Fruit fly)
Length = 2249
Score = 212 bits (518), Expect = 3e-54
Identities = 97/130 (74%), Positives = 114/130 (87%)
Query: 3 ECVERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLI 62
E +++ L G+E+ E L Y+FRDRS LLQAMTHAS+ N LTDCYQRLEFLGDA+LDYLI
Sbjct: 1984 EELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLI 2043
Query: 63 TRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQ 122
TRHLYED R HSPGALTDLRSALVNNTIFA+LA RHGFHK+FRH+SPGLN+V+ ++V+IQ
Sbjct: 2044 TRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQ 2103
Query: 123 EENGHSISEE 132
+ENGH ISEE
Sbjct: 2104 QENGHCISEE 2113
Score = 38.3 bits (85), Expect = 0.077
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 27 SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
S++LQA+T ++ + + + RLE +GD+ L Y IT +LY G L+ LRS V
Sbjct: 1724 SIILQALTMSNANDGINLE---RLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1780
Query: 87 NNTIFATLAARHGFHKY 103
N L R +Y
Sbjct: 1781 ANLNLYRLGRRKRLGEY 1797
>UniRef50_UPI00015B5D4A Cluster: PREDICTED: similar to dicer-1; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to dicer-1 -
Nasonia vitripennis
Length = 1917
Score = 209 bits (510), Expect = 2e-53
Identities = 98/128 (76%), Positives = 110/128 (85%)
Query: 5 VERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITR 64
+E L GY+ LER + Y FR+RS LLQA THAS+ N LTDCYQRLEFLGDA+LDYLITR
Sbjct: 1650 LEIMLDGYDSLERSIGYTFRNRSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITR 1709
Query: 65 HLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
HLYED R HSPGALTDLRSALVNNTIFA+LA R GFHKYFRH+SPGLN V+ ++V+IQEE
Sbjct: 1710 HLYEDPRQHSPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLNTVIDRFVRIQEE 1769
Query: 125 NGHSISEE 132
NGHSISEE
Sbjct: 1770 NGHSISEE 1777
Score = 36.7 bits (81), Expect = 0.24
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 27 SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
SL+LQA+T ++ + + + RLE +GD+ L Y IT +L+ G L+ LRS V
Sbjct: 1377 SLILQALTMSNANDGINLE---RLETIGDSFLKYAITTYLFCTYNNIHEGKLSHLRSKQV 1433
Query: 87 NN 88
+N
Sbjct: 1434 SN 1435
>UniRef50_UPI0000DB7B4D Cluster: PREDICTED: similar to Dicer-1
CG4792-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to
Dicer-1 CG4792-PA - Apis mellifera
Length = 1838
Score = 204 bits (499), Expect = 5e-52
Identities = 95/124 (76%), Positives = 108/124 (87%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
L GYE+LE+ + Y+F D S LLQA THAS+ N LTDCYQRLEFLGDA+LDYLITRHLYE
Sbjct: 1578 LDGYEELEKNIGYKFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYE 1637
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHS 128
D R HSPGALTDLRSALVNNTIFA+LA R GFHKYFRH+SPGL+ V+ ++V+IQEENGHS
Sbjct: 1638 DTRQHSPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHS 1697
Query: 129 ISEE 132
ISEE
Sbjct: 1698 ISEE 1701
Score = 37.5 bits (83), Expect = 0.13
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 27 SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
SL+LQA+T ++ + + + RLE +GD+ L Y IT +LY G L+ LRS V
Sbjct: 1304 SLILQALTMSNANDGINLE---RLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQV 1360
Query: 87 NN 88
+N
Sbjct: 1361 SN 1362
>UniRef50_Q17KP3 Cluster: Dicer-1; n=2; Aedes aegypti|Rep: Dicer-1 -
Aedes aegypti (Yellowfever mosquito)
Length = 2193
Score = 204 bits (499), Expect = 5e-52
Identities = 95/130 (73%), Positives = 109/130 (83%)
Query: 3 ECVERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLI 62
+ +E L GY E L Y+F DRS LLQAMTHAS+ N LTDCYQRLEFLGDA+LDYLI
Sbjct: 1928 QTLEHLLDGYSAFEDSLGYQFTDRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLI 1987
Query: 63 TRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQ 122
TRHLYED R HSPGALTDLRSALVNNTIFA+LA RH FHKYFRH+SPGLN+V+ ++V+IQ
Sbjct: 1988 TRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQ 2047
Query: 123 EENGHSISEE 132
++NGH ISEE
Sbjct: 2048 QDNGHIISEE 2057
Score = 37.9 bits (84), Expect = 0.10
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 27 SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
S++LQA+T ++ + + + RLE +GD+ L Y IT +LY G L+ LRS V
Sbjct: 1655 SIILQALTMSNANDGINLE---RLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQV 1711
Query: 87 NNTIFATLAAR 97
+N L R
Sbjct: 1712 SNLNLYRLGRR 1722
>UniRef50_UPI0000D5738B Cluster: PREDICTED: similar to CG4792-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG4792-PA
- Tribolium castaneum
Length = 1835
Score = 203 bits (495), Expect = 2e-51
Identities = 90/125 (72%), Positives = 111/125 (88%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
L GY+Q ER + Y+FRDRS LLQA+THAS N LTDCYQRLEFLGDA+LDYLITRHLYE
Sbjct: 1576 LDGYDQFERHIGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYE 1635
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHS 128
D R HSPGALTDLRSALVNNTIFA+LA R+GFH+YFR++SP LNEV++K+V++QE++GH+
Sbjct: 1636 DTRMHSPGALTDLRSALVNNTIFASLAVRNGFHRYFRNLSPSLNEVVEKFVRLQEDSGHT 1695
Query: 129 ISEEV 133
+ +E+
Sbjct: 1696 LVDEL 1700
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
+++ ++++ ++LLQA+T ++ + + + RLE +GD+ L Y IT +LY
Sbjct: 1338 FDEQPNLVEHPGPSPNVLLQALTMSNANDGINLE---RLETIGDSFLKYAITNYLYSKYE 1394
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
G L+ LRS V+N L R G +Y
Sbjct: 1395 NVHEGKLSHLRSKQVSNLNLYRLGRRKGLGEY 1426
>UniRef50_Q9UPY3 Cluster: Endoribonuclease Dicer; n=50; Eumetazoa|Rep:
Endoribonuclease Dicer - Homo sapiens (Human)
Length = 1912
Score = 167 bits (405), Expect = 1e-40
Identities = 74/116 (63%), Positives = 94/116 (81%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
+ G+E E+ + YRF++++ LLQA THAS+H N +TDCYQRLEFLGDAILDYLIT+HLYE
Sbjct: 1653 ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYE 1712
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
D R HSPG LTDLRSALVNNTIFA+LA ++ +HKYF+ +SP L V+ +V+ Q E
Sbjct: 1713 DPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLE 1768
Score = 32.7 bits (71), Expect = 3.8
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 28 LLLQAMT--HASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSAL 85
L+LQA+T +AS N+ +RLE LGD+ L + IT +L+ G L+ +RS
Sbjct: 1286 LILQALTLSNASDGFNL-----ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK 1340
Query: 86 VNNTIFATLAARHG 99
V+N L + G
Sbjct: 1341 VSNCNLYRLGKKKG 1354
>UniRef50_UPI0000586635 Cluster: PREDICTED: similar to Dicer protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Dicer protein - Strongylocentrotus purpuratus
Length = 1850
Score = 159 bits (387), Expect = 2e-38
Identities = 71/127 (55%), Positives = 95/127 (74%)
Query: 3 ECVERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLI 62
+ ++ +L GY+ E+ + YRFRDR+ LLQA TH+S+HRN +TDCYQRLEFLGDA+LDYLI
Sbjct: 1587 DVLQHQLVGYDGFEKTINYRFRDRAYLLQAFTHSSYHRNSITDCYQRLEFLGDALLDYLI 1646
Query: 63 TRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQ 122
TRHLY+ SPGALTDLRSALVNNTIFA+LA + FHKYF+ + + +V+ +V
Sbjct: 1647 TRHLYDHHTNLSPGALTDLRSALVNNTIFASLAVKFNFHKYFKAYTANMFQVIDNFVTFV 1706
Query: 123 EENGHSI 129
+ ++
Sbjct: 1707 DAKNEAL 1713
>UniRef50_P34529 Cluster: Endoribonuclease dcr-1; n=2;
Caenorhabditis|Rep: Endoribonuclease dcr-1 -
Caenorhabditis elegans
Length = 1845
Score = 148 bits (358), Expect = 6e-35
Identities = 68/113 (60%), Positives = 89/113 (78%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
+ QLE + YRF++R+ L+QA THAS+ N +T CYQRLEFLGDA+LDY+ITR+L+ED R
Sbjct: 1578 FTQLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYMITRYLFEDSR 1637
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
+SPG LTDLRSALVNNTIFA+LA + F K+F M PGL +++K+VK+ E
Sbjct: 1638 QYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMIEKFVKLCSE 1690
>UniRef50_UPI0000DB7B59 Cluster: PREDICTED: similar to Dicer-1
CG4792-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Dicer-1 CG4792-PA - Apis mellifera
Length = 1040
Score = 136 bits (329), Expect = 2e-31
Identities = 63/118 (53%), Positives = 86/118 (72%)
Query: 16 ERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSP 75
E L Y+F++R LLQA TH S+ N +T+CYQRLEFLGDAILD+LIT ++YE+ +P
Sbjct: 812 ETKLGYKFKNRGYLLQAFTHPSYSANNMTECYQRLEFLGDAILDFLITSYIYENCGNLNP 871
Query: 76 GALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISEEV 133
G+LTDLRSALVNN FA L RHG H SP LN++++++VK QEE + +++E+
Sbjct: 872 GSLTDLRSALVNNITFACLTVRHGLHIALLCYSPKLNDIIERFVKFQEERNYIVNDEL 929
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
+RLE LGD+ L ++I+ LY + G+LT ++ ++ N
Sbjct: 625 ERLETLGDSYLKFIISLFLYNQFPKYGEGSLTMIKGKIIGN 665
>UniRef50_Q174T8 Cluster: Dicer-1; n=3; Culicidae|Rep: Dicer-1 - Aedes
aegypti (Yellowfever mosquito)
Length = 1658
Score = 136 bits (328), Expect = 3e-31
Identities = 62/129 (48%), Positives = 87/129 (67%)
Query: 5 VERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITR 64
V+ L Y ++E +L Y+F+DR+ LLQA+THAS+ N +T YQ+LEFLGDA+LD+LI+
Sbjct: 1394 VDAFLKNYRRIESILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISM 1453
Query: 65 HLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
+++E SPG LTDLRSALVNN A + RHG H Y S + + K+V QE+
Sbjct: 1454 YIFEQNPTMSPGQLTDLRSALVNNVTLACILVRHGLHLYILAESASFTDTVSKFVLFQEQ 1513
Query: 125 NGHSISEEV 133
N H I+++V
Sbjct: 1514 NKHEITDQV 1522
>UniRef50_UPI00015B633C Cluster: PREDICTED: similar to dicer-1; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to dicer-1 -
Nasonia vitripennis
Length = 1563
Score = 126 bits (305), Expect = 2e-28
Identities = 62/121 (51%), Positives = 82/121 (67%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+ +E L Y+FR+R+ LLQA TH S+ N T YQRLEFLGDA+LD+L+T H+YE
Sbjct: 1361 QTMEERLGYKFRNRAFLLQAFTHPSYMPNRQTASYQRLEFLGDAVLDFLLTIHIYETCGN 1420
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISEE 132
SPG LTDLRSALVNN FA LA R+G H ++P L +++ K+VK QE + I +E
Sbjct: 1421 LSPGELTDLRSALVNNITFACLAVRYGLHTALLALAPKLFDLIDKFVKFQENRNYKIDDE 1480
Query: 133 V 133
+
Sbjct: 1481 L 1481
Score = 31.9 bits (69), Expect = 6.7
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
+R+E LGD+ L + I+ LY+ G LT L+ LV N
Sbjct: 1152 ERVETLGDSFLKFAISLFLYQAYPTCGEGPLTHLKGKLVGN 1192
>UniRef50_Q95YG3 Cluster: Double-strand-specific ribonuclease; n=28;
Sophophora|Rep: Double-strand-specific ribonuclease -
Drosophila melanogaster (Fruit fly)
Length = 1722
Score = 124 bits (298), Expect = 1e-27
Identities = 58/119 (48%), Positives = 80/119 (67%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE+ L Y F+DR LLQA+TH S+ N +T YQ LEF+GDAILD+LI+ +++E+ +
Sbjct: 1436 LEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKMN 1495
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISEEV 133
PGALTDLRSALVNNT A + RH H + + L+E++ K+V QE GH ++ V
Sbjct: 1496 PGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1554
Score = 31.5 bits (68), Expect = 8.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
+RLE LGD+ L T +L + G LT+++S LV+N
Sbjct: 1210 ERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSN 1250
>UniRef50_Q9SP32 Cluster: Endoribonuclease Dicer homolog; n=8;
Embryophyta|Rep: Endoribonuclease Dicer homolog -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1909
Score = 115 bits (277), Expect = 4e-25
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LER L+Y F+++ LL++A+THAS + ++ CYQRLEF+GDA+LD+LITRHL+
Sbjct: 1562 LERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYTSLP 1620
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK-IQEEN 125
PG LTDLR+A VNN FA +A +H H Y RH S L + ++++VK +Q E+
Sbjct: 1621 PGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTES 1672
Score = 49.2 bits (112), Expect = 4e-05
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
QL+ ++ Y S +L+A+T AS T CY+R E LGDA L ++++R L+
Sbjct: 1345 QLKNLISYPI-PTSKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQK 1400
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G LT +R +V+N + A G Y +
Sbjct: 1401 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQ 1432
>UniRef50_Q9M9P8 Cluster: T17B22.1 protein; n=13; Eukaryota|Rep:
T17B22.1 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 2042
Score = 113 bits (272), Expect = 2e-24
Identities = 52/111 (46%), Positives = 76/111 (68%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
+E +L Y F D+SLL++A+TH S+ + CYQRLEFLGD++LDYLIT+HLY+ C S
Sbjct: 1806 MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLS 1865
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEEN 125
PG LTD+RSA VNN +A +A + HK+ + S L++ + + V E++
Sbjct: 1866 PGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQS 1916
>UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG6493-PA
- Tribolium castaneum
Length = 1623
Score = 111 bits (267), Expect = 7e-24
Identities = 55/129 (42%), Positives = 82/129 (63%)
Query: 5 VERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITR 64
V+ + + ++E+ L Y F +R+ LLQA+TH+S+ N +T Y+RLEFLGDA+LD+LIT
Sbjct: 1364 VDFHMPQWREIEQRLGYTFTNRAFLLQALTHSSYSPNRITLSYERLEFLGDAVLDFLITC 1423
Query: 65 HLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
+++E PG +TDLRS+LVNN FA+L R GFHK+ M+ L + K+
Sbjct: 1424 YIFEHCGHLEPGQVTDLRSSLVNNNTFASLVVRCGFHKFLLMMNSNLQGHIDKFADYLAS 1483
Query: 125 NGHSISEEV 133
+ I +EV
Sbjct: 1484 KNYVIDDEV 1492
>UniRef50_Q2HTA7 Cluster: Helicase, C-terminal; Argonaute and Dicer
protein, PAZ; Ribonuclease III, bacterial; n=1; Medicago
truncatula|Rep: Helicase, C-terminal; Argonaute and Dicer
protein, PAZ; Ribonuclease III, bacterial - Medicago
truncatula (Barrel medic)
Length = 1939
Score = 110 bits (264), Expect = 2e-23
Identities = 53/114 (46%), Positives = 78/114 (68%), Gaps = 2/114 (1%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
++ LE L +F+D+ LL++++THAS + ++ CYQRLEF+GDA+LD+LITRHL+
Sbjct: 1601 FDALEGALNIKFKDKGLLIESITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFSYT 1659
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK-IQEE 124
PG LTDLR+A VNN FA + +H H + RH S L + +K +VK +Q+E
Sbjct: 1660 DLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQIKDFVKEVQDE 1713
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 29 LLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
+L+A+T AS T CY+R E LGDA L ++++R L+ G LT +R +V+N
Sbjct: 1399 ILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSN 1455
Query: 89 TIFATLAARHGFHKY 103
+ A G Y
Sbjct: 1456 MVLYRYALSKGLQSY 1470
>UniRef50_A7SIA4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 261
Score = 109 bits (262), Expect = 3e-23
Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHR--NVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+E L Y FRDR +LLQA+TH S+ R + + Y++LEFLGDA+LDYL+TRH+ +
Sbjct: 9 VEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPR 68
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK 120
SPGA+TDLRSA+VNN A L + FHK+ R MS L +V++++V+
Sbjct: 69 LSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVR 116
>UniRef50_A7PXV4 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1961
Score = 108 bits (260), Expect = 5e-23
Identities = 54/114 (47%), Positives = 78/114 (68%), Gaps = 2/114 (1%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
++ LE L +F +R LL++A+THAS + ++ CYQRLEF+GDA+LD+LITRHL+
Sbjct: 1622 FDTLEGALNIKFNNRGLLIEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYT 1680
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK-IQEE 124
PG LTDLR+A VNN FA +A +H H + RH S L + ++ +VK +Q+E
Sbjct: 1681 DLPPGRLTDLRAAAVNNENFARVAVKHKLHIHLRHGSSALEKQIRDFVKEVQDE 1734
Score = 47.2 bits (107), Expect = 2e-04
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
QL+ V+ Y + +L+A+T AS T CY+R E LGDA L ++++R L+
Sbjct: 1403 QLKDVINYPV-PAAKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQK 1458
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G LT +R +V+N + A G Y +
Sbjct: 1459 HEGQLTRMRQQMVSNMVLYQSALCKGLQSYIQ 1490
>UniRef50_Q0IWV3 Cluster: Os10g0485600 protein; n=7; Eukaryota|Rep:
Os10g0485600 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1605
Score = 106 bits (254), Expect = 3e-22
Identities = 54/117 (46%), Positives = 73/117 (62%)
Query: 4 CVERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLIT 63
C +++ E+LE L+Y F + LLL+A+TH S + CYQRLEFLGD++LD L+T
Sbjct: 1260 CSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLDLLLT 1319
Query: 64 RHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK 120
RHLY PG LTDLRSALV+N FA R+ H + +H S L E + +YV+
Sbjct: 1320 RHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYVR 1376
Score = 34.3 bits (75), Expect = 1.3
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 14 QLERVLQYRFR-DRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
QL R + Y +L+L+A+T R T +RLE LGD++L Y++ L+
Sbjct: 1060 QLRREIGYNQHIPVTLILEAITTL---RCCETFSLERLELLGDSVLKYVVGCDLFLRYPM 1116
Query: 73 HSPGALTDLRSALVNNTIFATLAARHG 99
G L+D+RS V N ATL +HG
Sbjct: 1117 KHEGQLSDMRSKAVCN---ATL-HKHG 1139
>UniRef50_A7PV34 Cluster: Chromosome chr4 scaffold_32, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_32, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1340
Score = 106 bits (254), Expect = 3e-22
Identities = 52/98 (53%), Positives = 65/98 (66%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE +L Y FRD SLL++A+TH S+ + CYQRLEFLGDA+LDYL+T HLY S
Sbjct: 1098 LESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHKYPGMS 1157
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLN 112
PG LTDLRSA VNN +A A + H++ H S L+
Sbjct: 1158 PGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELH 1195
>UniRef50_A3A0R6 Cluster: Putative uncharacterized protein; n=4; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. japonica (Rice)
Length = 1889
Score = 103 bits (248), Expect = 1e-21
Identities = 53/124 (42%), Positives = 75/124 (60%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
+E LE L Y F + LL++A+TH S CY+RLEFLGDA+LD L+TR+L+ +
Sbjct: 1175 FEMLEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHK 1234
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISE 131
+ G LTDLRSA VNN FA +A +H FH + +H S L + + +YV E + E
Sbjct: 1235 DTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKVE 1294
Query: 132 EVTD 135
++D
Sbjct: 1295 LLSD 1298
>UniRef50_A7P4V9 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1593
Score = 102 bits (245), Expect = 3e-21
Identities = 53/108 (49%), Positives = 68/108 (62%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E LE + Y F + LLL+A+THA+ + CYQRLEFLGD++LD LIT HLY+ R
Sbjct: 1194 EILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRD 1253
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK 120
PG LTDLRSA VNN FA +A R ++ +H S L +K+Y K
Sbjct: 1254 IDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKEYAK 1301
Score = 35.1 bits (77), Expect = 0.72
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 27 SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
SL+L+A+T + +RLE LGD++L Y ++ HL+ G L+ RS +V
Sbjct: 999 SLILEAITTLRCSESF---SMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVV 1055
Query: 87 NNTIFATLAARHGFHKYFR 105
N+ L Y R
Sbjct: 1056 CNSTLHKLGTDRSLQGYIR 1074
>UniRef50_Q10HL3 Cluster: Type III restriction enzyme, res subunit
family protein, expressed; n=10; Oryza sativa|Rep: Type
III restriction enzyme, res subunit family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1410
Score = 101 bits (243), Expect = 6e-21
Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 8 ELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLY 67
E LE +L Y+F D LLL+A+TH S+ + T CYQRLEFLGDAILD+L T + Y
Sbjct: 1157 EFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYY 1216
Query: 68 EDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGH 127
+P LTDLRSA VNN +A A + G +K+ H S L+ + Y+ EE G
Sbjct: 1217 SKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYL---EEFGQ 1273
Query: 128 SIS 130
S +
Sbjct: 1274 SFT 1276
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/101 (26%), Positives = 43/101 (42%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHM 107
+ LE LGD+ L Y+ TRHL+ + R G LT ++ L++N LA Y
Sbjct: 1006 ESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAE 1065
Query: 108 SPGLNEVLKKYVKIQEENGHSISEEVTDSSYVQWLRTDKSR 148
+ + + E + IS + Y Q + KS+
Sbjct: 1066 EFNPRDWIIPCLDYDERDNKKISFLAPNGMYSQRKMSIKSK 1106
>UniRef50_Q0E5R5 Cluster: Putative dicer-like protein; n=1; Mucor
circinelloides|Rep: Putative dicer-like protein - Mucor
circinelloides
Length = 1529
Score = 95.9 bits (228), Expect = 4e-19
Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+++ R+L Y F++ +L+ +A+THAS N CYQRLEFLGDA+LD+ +T +L+E
Sbjct: 1252 KKVSRILGYEFQNEALIAEALTHASV-TNSSVPCYQRLEFLGDAVLDFCVTNYLFEKYHT 1310
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKY----VKIQEENG 126
PG L DLR + VNN I + L + G H + RH S +K++ V Q+E G
Sbjct: 1311 APPGTLHDLRKSSVNNDILSVLCIQLGLHVHIRHFSTTFPSAVKQFQELVVASQDEKG 1368
Score = 38.3 bits (85), Expect = 0.077
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 19 LQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGAL 78
L R +D +L+A T +S L YQRLEFLGD++L ++ + +++ + L
Sbjct: 1055 LSGRMKD-PYMLEAFTASSAG---LEKDYQRLEFLGDSVLKFITSTYVFVTLPISNEFEL 1110
Query: 79 TDLRSALVNNTIFATLAARHGFHKY 103
T+ R +++NT A + ++Y
Sbjct: 1111 TESRMRMISNTALFKSAIQLRLYEY 1135
>UniRef50_Q9LXW7 Cluster: Putative uncharacterized protein T15B3_60;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein T15B3_60 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1531
Score = 90.2 bits (214), Expect = 2e-17
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
+LER +Q+ F + LL +A+TH+S + Y+RLEFLGD++LD+LITRHL+
Sbjct: 1151 ELERKIQHEFSAKFLLKEAITHSSLRESY---SYERLEFLGDSVLDFLITRHLFNTYEQT 1207
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYV---KIQEENGHSI 129
PG +TDLRSA VNN FA +A ++ H + + + L + Y+ + +E G SI
Sbjct: 1208 GPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSI 1266
Score = 35.1 bits (77), Expect = 0.72
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRH 106
+RLE LGD++L Y+ + HL+ G L+ R ++++N+ L Y R+
Sbjct: 973 ERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRN 1031
>UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|Rep:
Dicer-like 4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1702
Score = 86.2 bits (204), Expect = 3e-16
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E LE L Y+F + LL+QA H S++R+ CYQRLEFLGDA+LDYL+T + +
Sbjct: 1293 ETLENQLDYKFLHKGLLVQAFIHPSYNRHG-GGCYQRLEFLGDAVLDYLMTSYFFTVFPK 1351
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKY 118
PG LTDLRS VNN A +A ++ S L+EV++ Y
Sbjct: 1352 LKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDY 1397
Score = 46.4 bits (105), Expect = 3e-04
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 29 LLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
+L+A+T H + +RLE LGDA L + ++RHL+ G LT RS +VNN
Sbjct: 1103 VLEALTTEKCHERL---SLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNN 1159
Query: 89 TIFATLAARHGFHKYFR 105
+ LA + Y R
Sbjct: 1160 SNLCRLAIKKNLQVYIR 1176
>UniRef50_P84634 Cluster: Dicer-like protein 4; n=1; Arabidopsis
thaliana|Rep: Dicer-like protein 4 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1589
Score = 86.2 bits (204), Expect = 3e-16
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E LE L Y+F + LL+QA H S++R+ CYQRLEFLGDA+LDYL+T + +
Sbjct: 1222 ETLENQLDYKFLHKGLLVQAFIHPSYNRHG-GGCYQRLEFLGDAVLDYLMTSYFFTVFPK 1280
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKY 118
PG LTDLRS VNN A +A ++ S L+EV++ Y
Sbjct: 1281 LKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDY 1326
Score = 34.3 bits (75), Expect = 1.3
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 29 LLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRS 83
+L+A+T H + +RLE LGDA L + ++RHL+ G LT RS
Sbjct: 1049 VLEALTTEKCHERL---SLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRS 1100
>UniRef50_Q01HF5 Cluster: OSIGBa0157K09-H0214G12.2 protein; n=4; Oryza
sativa|Rep: OSIGBa0157K09-H0214G12.2 protein - Oryza
sativa (Rice)
Length = 1604
Score = 85.8 bits (203), Expect = 4e-16
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE ++ Y+F+ + LLLQA H S ++ CYQRLEFLGDA+L+Y+IT +LY
Sbjct: 1164 LEELIGYKFKHKGLLLQAFVHPSFSQHS-GGCYQRLEFLGDAVLEYVITSYLYSTYPDIK 1222
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKK---YVKIQEENGHSISE 131
PG +TDLRS V N A A HK+ S L + K YVK+ + E
Sbjct: 1223 PGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEE 1282
Score = 39.9 bits (89), Expect = 0.025
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
+R E LGDA L Y++ RH + G LT RS +VNN+ L+ R Y R
Sbjct: 990 ERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIR 1047
>UniRef50_A7LFZ6 Cluster: Dicer-like protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Dicer-like protein - Oryza
sativa subsp. japonica (Rice)
Length = 1657
Score = 85.8 bits (203), Expect = 4e-16
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE ++ Y+F+ + LLLQA H S ++ CYQRLEFLGDA+L+Y+IT +LY
Sbjct: 1217 LEELIGYKFKHKGLLLQAFVHPSFSQHS-GGCYQRLEFLGDAVLEYVITSYLYSTYPDIK 1275
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKK---YVKIQEENGHSISE 131
PG +TDLRS V N A A HK+ S L + K YVK+ + E
Sbjct: 1276 PGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEE 1335
Score = 39.9 bits (89), Expect = 0.025
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
+R E LGDA L Y++ RH + G LT RS +VNN+ L+ R Y R
Sbjct: 1043 ERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIR 1100
>UniRef50_A7PX71 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 287
Score = 83.4 bits (197), Expect = 2e-15
Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 9/120 (7%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRH---LYED 69
E +E++L Y F ++ LL +A THAS +N + Y+RLEF+GD++L LIT+ LY D
Sbjct: 31 EGVEQILGYSFTNKRLLEEAYTHASCQKNQFS--YERLEFMGDSVLSLLITKEQFFLYPD 88
Query: 70 KRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK-IQEENGHS 128
+ PG LT LRSA V+ A +A +HG H++ RH P + + + ++ + I+E HS
Sbjct: 89 LQ---PGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEYPLHS 145
>UniRef50_O23395 Cluster: UFD1 like protein; n=8; Magnoliophyta|Rep:
UFD1 like protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 778
Score = 77.8 bits (183), Expect = 1e-13
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 8 ELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLY 67
+L E LE++L Y+F+D+SLLL+A T AS+ + ++ Y+ LE LGD+IL+ I
Sbjct: 50 QLMEIESLEKILNYKFKDKSLLLKAFTDASYVDDK-SESYELLELLGDSILNMGIIYDFI 108
Query: 68 EDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
+ +PG LT LR+ V+ A +A H + Y RH P L E + ++V+ E+
Sbjct: 109 KLYPKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEK 165
>UniRef50_Q1DKI1 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)]; n=2; Coccidioides
immitis|Rep: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)] - Coccidioides immitis
Length = 1464
Score = 77.8 bits (183), Expect = 1e-13
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 8 ELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRN-VLTDCYQRLEFLGDAILDYLITRHL 66
EL Q+++ L Y F+ LL A TH S+ CYQRLEFLGDA+LD H+
Sbjct: 1183 ELDLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEFLGDALLDMACVEHI 1242
Query: 67 YEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK 120
Y P LT+ + A+V+N ++A R G H + H S L + YV+
Sbjct: 1243 YHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVE 1296
>UniRef50_Q69KJ0 Cluster: CAF protein-like; n=2; Oryza sativa|Rep:
CAF protein-like - Oryza sativa subsp. japonica (Rice)
Length = 299
Score = 76.6 bits (180), Expect = 2e-13
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDC-YQRLEFLGDAILDYLITRHLYEDKRCH 73
+E +L Y FRD++L+ +A+TH S + Y+RLE+LGDA+L +++R ++
Sbjct: 42 VESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLTYGQL 101
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK 120
PG LT LR+A V+ A +A HG H + RH +P L+ + +++
Sbjct: 102 QPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIE 148
>UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core
eudicotyledons|Rep: Similarity to CAF protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 391
Score = 74.5 bits (175), Expect = 1e-12
Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Query: 5 VERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTD--CYQRLEFLGDAILDYLI 62
V E+ E +E++L Y+F ++SLL +A+TH S TD Y+RLEF+GD+ + I
Sbjct: 53 VSSEMESMEAVEKILNYKFSNKSLLKEAITHTS-----CTDFPSYERLEFIGDSAIGLAI 107
Query: 63 TRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK-I 121
+ +LY P L+ LR+A V+ A ++ HG + + R +P L+E +K++ + +
Sbjct: 108 SNYLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAV 167
Query: 122 QEENGHSIS 130
+E+ S+S
Sbjct: 168 GKEDDLSVS 176
>UniRef50_A2RAF3 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease dcl1 (EC 3.1.26.-); ATP-dependent
helicase dcl1 (EC 3.6.1.-)]; n=6; Trichocomaceae|Rep:
Dicer-like protein 1 [Includes: Endoribonuclease dcl1 (EC
3.1.26.-); ATP-dependent helicase dcl1 (EC 3.6.1.-)] -
Aspergillus niger
Length = 1525
Score = 74.5 bits (175), Expect = 1e-12
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 8 ELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRN-VLTDCYQRLEFLGDAILDYLITRHL 66
EL+ ++E L YRFR +LL A TH S+ CYQRLEFLGD+++D + L
Sbjct: 1239 ELYLSRKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLIDMVCVEDL 1298
Query: 67 YEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYV-KIQEEN 125
+ P LT+ + A+V+N LA + G H + ++ S L + +Y +IQ
Sbjct: 1299 FARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAEEIQTAE 1358
Query: 126 GHS 128
G S
Sbjct: 1359 GES 1361
>UniRef50_A4RKC3 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)]; n=2; Magnaporthe grisea|Rep:
Dicer-like protein 1 [Includes: Endoribonuclease DCL1 (EC
3.1.26.-); ATP-dependent helicase DCL1 (EC 3.6.1.-)] -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1591
Score = 72.5 bits (170), Expect = 4e-12
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 6 ERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLT-DCYQRLEFLGDAILDYLITR 64
+ +L Q++ + YRF++ LL A H S+ R YQRLEFLGD++LD +
Sbjct: 1237 QTQLELCSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENIPSYQRLEFLGDSLLDMVCVD 1296
Query: 65 HLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKI 121
+L++ P LT+ + A+V+N F +A GFH++ HM P L + ++ ++
Sbjct: 1297 YLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRHLIHMQPALGGSITEWAEL 1353
>UniRef50_A6LNE7 Cluster: Ribonuclease III; n=1; Thermosipho
melanesiensis BI429|Rep: Ribonuclease III - Thermosipho
melanesiensis BI429
Length = 231
Score = 72.1 bits (169), Expect = 5e-12
Identities = 32/90 (35%), Positives = 53/90 (58%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
++E V+ YRFR++ LL A+TH S+ Y+RLEFLGD+++D L+ LYE +
Sbjct: 8 EIEHVIGYRFRNKELLFTALTHTSYANENKKQSYERLEFLGDSVIDILVCTILYEQYQTL 67
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKY 103
+ G + ++SA+ + I +A + KY
Sbjct: 68 NEGTMAQIKSAVTSEDILFEIAKKFNLGKY 97
>UniRef50_A2Y2L5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 344
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
++ER+L+Y+FRD LL +A+TH S + ++ YQRLEF+GD+ L + LY
Sbjct: 33 RVERLLRYQFRDGRLLEEALTHQSFADDAVS--YQRLEFVGDSALGLAFSNFLYLTNPTL 90
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK-IQEENGHSIS 130
PG L+ LR+A ++ A +A RH + R P L+ ++ ++++ +++E +S
Sbjct: 91 GPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLS 148
>UniRef50_Q09884 Cluster: Protein Dicer (Cell cycle control protein
dcr1) (RNA interference pathway protein dcr1) [Includes:
Endoribonuclease dcr1 (EC 3.1.26.-); ATP-dependent
helicase dcr1 (EC 3.6.1.-)]; n=2; Fungi/Metazoa
group|Rep: Protein Dicer (Cell cycle control protein
dcr1) (RNA interference pathway protein dcr1) [Includes:
Endoribonuclease dcr1 (EC 3.1.26.-); ATP-dependent
helicase dcr1 (EC 3.6.1.-)] - Schizosaccharomyces pombe
(Fission yeast)
Length = 1374
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
+E + Y F+++ LL A H S + + + YQ+LEFLGDA+LDY+I ++LY+
Sbjct: 1086 IEETIGYSFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNA 1145
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISE 131
+ G LTD +S V N + + HKY +H S + + + +Y ++ E + SE
Sbjct: 1146 TSGELTDYKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFRETASE 1203
>UniRef50_A6QZ52 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1359
Score = 68.5 bits (160), Expect = 6e-11
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLT-DCYQRLEFLGDAILDYLITRHLYEDKR 71
+Q+ L Y F LL A THAS+ T CYQRLEFLGD++LD + +LY
Sbjct: 1097 KQIGNRLGYHFTYPRLLRSAFTHASYPSAWSTVPCYQRLEFLGDSLLDMVCVEYLYHHYP 1156
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK 120
P LT+ + A+V+N + + G HK+ ++S L + +Y +
Sbjct: 1157 DRDPQWLTEHKMAMVSNKFLGAVTVKLGLHKHLLYISNALFGQITRYAE 1205
>UniRef50_O67082 Cluster: Ribonuclease 3; n=1; Aquifex aeolicus|Rep:
Ribonuclease 3 - Aquifex aeolicus
Length = 221
Score = 68.5 bits (160), Expect = 6e-11
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
EQLE+ L Y F+D+SLL +A+TH S+ + + Y+ LEFLGDA++++ I L +
Sbjct: 5 EQLEKKLGYTFKDKSLLEKALTHVSYSKK---EHYETLEFLGDALVNFFIVDLLVQYSPN 61
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVL 115
G L+ L++ L++ F LA + HK+ R +NE +
Sbjct: 62 KREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKINETI 104
>UniRef50_UPI0000E0E146 Cluster: ribonuclease III; n=1; alpha
proteobacterium HTCC2255|Rep: ribonuclease III - alpha
proteobacterium HTCC2255
Length = 241
Score = 68.1 bits (159), Expect = 8e-11
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
+ +L+R++ Y+F D SLL QA+TH S HR +RLEFLGDA+L ++ HL++
Sbjct: 21 FVKLQRLIDYQFNDVSLLKQALTHKSAHRQH----NERLEFLGDAVLGMIVGEHLFKAFP 76
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G LT +RSA+V A +A G ++ +
Sbjct: 77 NSPEGKLTRMRSAIVKGDTLAEIALEKGLGEFIQ 110
>UniRef50_A1C9M6 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent
helicase dcl2 (EC 3.6.1.-)]; n=10; cellular
organisms|Rep: Dicer-like protein 2 [Includes:
Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent
helicase dcl2 (EC 3.6.1.-)] - Aspergillus clavatus
Length = 1389
Score = 67.7 bits (158), Expect = 1e-10
Identities = 33/83 (39%), Positives = 51/83 (61%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
+++L+R + Y F + SLL++A+TH S + T YQRLEFLGDA+LD +I ++
Sbjct: 1099 HDRLKRHISYTFENESLLVEALTHPSCDYDASTQSYQRLEFLGDAVLDMIIVSAIFNHPV 1158
Query: 72 CHSPGALTDLRSALVNNTIFATL 94
G +T ++ ALVN + A L
Sbjct: 1159 QMPQGHMTKIKHALVNANLLAFL 1181
Score = 32.3 bits (70), Expect = 5.1
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 5 VERELHGYEQLERVLQ-YRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLIT 63
+E EL + E +L+ F ++ A++ S LT+ YQR EFLGD+IL + ++
Sbjct: 914 LETELIATKLYETILRDVGFTSTQHIITAISAPS--AQALTN-YQRYEFLGDSILKFSVS 970
Query: 64 RHLYEDKRCHSPGALTDLRSALVNN 88
L+ G L++ R +V N
Sbjct: 971 CQLFFKHPNWHEGYLSEGRDEIVQN 995
>UniRef50_UPI000023D196 Cluster: hypothetical protein FG04408.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG04408.1
- Gibberella zeae PH-1
Length = 1451
Score = 67.3 bits (157), Expect = 1e-10
Identities = 31/90 (34%), Positives = 53/90 (58%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E LE ++ Y F+ +SLL++AMTH S+ + Y++LEFLGDA+LDY++ +++
Sbjct: 1155 EPLEELIGYTFQKKSLLIEAMTHGSYAADGQQRSYEQLEFLGDAVLDYIVVTRMFQSDPP 1214
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHK 102
G L +++A+ N A +HG +
Sbjct: 1215 VPNGRLHMVKTAMANADFLAFTNMQHGLRR 1244
Score = 39.9 bits (89), Expect = 0.025
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 25 DRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
D L+++A++ S V Y+R+EFLGD++L Y Y + G L +
Sbjct: 984 DLQLVIEAISSRSAAEPV---DYERIEFLGDSVLKYCTVIQAYSEHPFWPEGLLNHFKDR 1040
Query: 85 LVNNTIFATLAARHGFHKY 103
LV+NT + G K+
Sbjct: 1041 LVSNTRLTRMCLETGLSKF 1059
>UniRef50_Q0UL22 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)]; n=1; Phaeosphaeria
nodorum|Rep: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)] - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 1399
Score = 67.3 bits (157), Expect = 1e-10
Identities = 35/87 (40%), Positives = 54/87 (62%)
Query: 6 ERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRH 65
E +L G + LE ++ Y F+ + LLL+A+THAS + Y+RLEFLGDA+LDY+I++
Sbjct: 1088 EADLMGLDVLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKR 1147
Query: 66 LYEDKRCHSPGALTDLRSALVNNTIFA 92
L+ S + +R+A VN + A
Sbjct: 1148 LHAHSPELSHQKMHAIRTATVNASFLA 1174
Score = 39.1 bits (87), Expect = 0.044
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 45 DCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYF 104
D YQRLEFLGD IL ++ T HL LT + +V+N A G ++
Sbjct: 944 DNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFM 1003
Query: 105 RHMS-PGLNEVLKKYVKIQEENGHSISEE 132
S G + + E G ++ EE
Sbjct: 1004 ITKSFTGAKWAPRYAGDLLAETGPAVKEE 1032
>UniRef50_Q92JB0 Cluster: Ribonuclease 3; n=8; Rickettsia|Rep:
Ribonuclease 3 - Rickettsia conorii
Length = 227
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHAS---HHRNVLTDCYQRLEFLGDAILDYLITRH 65
+ +E+LE++L Y F+++ LL++A++H S HH Y+RLEFLGDA+L+ +IT
Sbjct: 1 MESFEKLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEI 60
Query: 66 LYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
L+ + ++ G L +RS LV + A+ Y
Sbjct: 61 LFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKNY 98
>UniRef50_Q2VF18 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease DCL-2 (EC 3.1.26.-); ATP-dependent
helicase DCL-2 (EC 3.6.1.-)]; n=1; Cryphonectria
parasitica|Rep: Dicer-like protein 2 [Includes:
Endoribonuclease DCL-2 (EC 3.1.26.-); ATP-dependent
helicase DCL-2 (EC 3.6.1.-)] - Cryphonectria parasitica
(Chesnut blight fungus) (Endothiaparasitica)
Length = 1451
Score = 66.1 bits (154), Expect = 3e-10
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE++++Y F +++LL++A+TH S++ + CY RLEF+GDAILDY+I ++ +
Sbjct: 1156 LEQLIEYSFCEKALLVEAVTHPSYNVSGTVACYDRLEFIGDAILDYIIVEEVFALEPALE 1215
Query: 75 PGALTDLRSALVNNTIFATL 94
+ LR+ALVN I L
Sbjct: 1216 NWQMHLLRTALVNADILGFL 1235
Score = 33.9 bits (74), Expect = 1.7
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
Y+R+EFLGD+IL IT +L K G L+ ++ LV+N
Sbjct: 1002 YERIEFLGDSILKTCITVNLAATKLHLPEGILSLMKDRLVSN 1043
>UniRef50_Q5F9X7 Cluster: Ribonuclease 3; n=5;
Betaproteobacteria|Rep: Ribonuclease 3 - Neisseria
gonorrhoeae (strain ATCC 700825 / FA 1090)
Length = 239
Score = 65.3 bits (152), Expect = 6e-10
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 3 ECVERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLI 62
+ ++R+ H +++ L Y FRD SLL +A+TH SHH +R EF+GD+IL+Y +
Sbjct: 4 DVLKRQAH--TAIQKKLGYAFRDMSLLRRALTHRSHHAKH----NERFEFVGDSILNYTV 57
Query: 63 TRHLYEDKRCHSPGALTDLRSALVNNTIFATLAA 96
R L++ + G L+ LR++LVN + A +AA
Sbjct: 58 ARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAA 91
>UniRef50_A1APX0 Cluster: Ribonuclease III; n=1; Pelobacter
propionicus DSM 2379|Rep: Ribonuclease III - Pelobacter
propionicus (strain DSM 2379)
Length = 234
Score = 64.9 bits (151), Expect = 8e-10
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHAS-HHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+LER + YRF D++ LLQA+TH S H YQRLEFLGDA+L ++ L+
Sbjct: 7 ELEREIAYRFIDQAPLLQALTHPSFEHEQAGGGNYQRLEFLGDAVLGMVLAEMLFRRFPD 66
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
+ G L+ LRS + + A +A G ++ R
Sbjct: 67 SNEGVLSRLRSQIADQDTLAGIARSFGLGRFVR 99
>UniRef50_A2QX45 Cluster: Dicer-like protein 2-2 [Includes:
Endoribonuclease dcl2-2 (EC 3.1.26.-); ATP-dependent
helicase dcl2-2 (EC 3.6.1.-)]; n=2; Aspergillus
niger|Rep: Dicer-like protein 2-2 [Includes:
Endoribonuclease dcl2-2 (EC 3.1.26.-); ATP-dependent
helicase dcl2-2 (EC 3.6.1.-)] - Aspergillus niger
Length = 1362
Score = 64.9 bits (151), Expect = 8e-10
Identities = 42/142 (29%), Positives = 76/142 (53%), Gaps = 17/142 (11%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
+E +L Y F D+SL +++MTH S V T Y+RL FLG ++L++++ +L+ + +
Sbjct: 1078 MEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMN 1137
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISEEVT 134
P + L+SA NNT +A FH+ + E + ++ + +E H++ + VT
Sbjct: 1138 PQRMQSLKSAFTNNTFLTFIAIT--FHQ--------VRE--QNHIDVDDE--HNVHKNVT 1183
Query: 135 DSSYVQWLRTDKSRVHTPSSNT 156
S W D R+H+ + +T
Sbjct: 1184 TCSIRLW---DFLRLHSDALST 1202
>UniRef50_A4XJW5 Cluster: Ribonuclease III; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Ribonuclease III - Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903)
Length = 224
Score = 64.5 bits (150), Expect = 1e-09
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
+E+ L YRF++ +LL A+TH S + + CY+RLEFLGDA+L+ +++++L+E S
Sbjct: 4 IEKKLGYRFKNPNLLKLALTHKSATHDDKS-CYERLEFLGDAVLELVVSKYLFEHFPQLS 62
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKY 103
G LT+LR+ +V + + +A +Y
Sbjct: 63 EGELTNLRATIVCSETLSKVAETLNLKRY 91
>UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n=1;
unknown|Rep: UPI00015BD56E UniRef100 entry - unknown
Length = 232
Score = 63.7 bits (148), Expect = 2e-09
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
+ +E LE + YRF+D++L+ +A TH S ++ ++ Y+ LEFLGDA+++++ L E
Sbjct: 1 MDSFELLEEKIGYRFKDKNLVKKAFTHISFSKS--SENYEVLEFLGDALVNFMTVNILVE 58
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
G L+ L+S L++ A+LA F KY
Sbjct: 59 AFPNKKEGELSQLKSFLISEEFLASLAKSLNFEKY 93
>UniRef50_A5CEW8 Cluster: Ribonuclease III; n=1; Orientia
tsutsugamushi Boryong|Rep: Ribonuclease III - Orientia
tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 251
Score = 63.3 bits (147), Expect = 2e-09
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+ L+ + Y F LL++A+TH S ++ T YQRLEFLGD IL+ +I+ L+++
Sbjct: 25 DALQSEIGYNFNSIDLLIEALTHPSINQYGYTKNYQRLEFLGDVILNLVISETLFKNFSH 84
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKY 103
++ G L R+ LV N +A + HKY
Sbjct: 85 YNEGKLAKSRAFLVCNESICLIAQKINLHKY 115
>UniRef50_Q6BCJ7 Cluster: Dicer-related RNase III protein Dcl1p; n=2;
Tetrahymena thermophila|Rep: Dicer-related RNase III
protein Dcl1p - Tetrahymena thermophila
Length = 1275
Score = 63.3 bits (147), Expect = 2e-09
Identities = 33/111 (29%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Query: 16 ERVLQYRFRDRSLLLQAMT-HASHHRNVLTDCYQRLEFLGDAILDYLITRHLY-----ED 69
E++L Y F+D+SLL++A+ H++ + YQ LEFLGDA+++ L+ H Y
Sbjct: 1015 EKILNYTFKDKSLLIKALNCHSNSNFEHYFQDYQILEFLGDALIEILVVSHGYHISRNRQ 1074
Query: 70 KRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK 120
K+ +SP +++S L++N + +A + FH Y ++S + + ++++
Sbjct: 1075 KKINSPYFFCEMKSLLLSNDFMSRMAILNKFHYYALNISKYQQDEIIQFIE 1125
Score = 41.9 bits (94), Expect = 0.006
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 25 DRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
D LL+++ + S+ + T + LE +GD ++ Y+ + +LY S ALT +R+
Sbjct: 732 DLELLIESFSQISYSK---TKNLELLEVIGDVVIKYISSLYLYLHLPNQSENALTMIRTI 788
Query: 85 LVNNTIFATLAARHGFHKYFRHMSP 109
+NN A R+G Y + P
Sbjct: 789 FINNKYLGISAFRNGLQFYVQTKRP 813
>UniRef50_P0C5H7 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent
helicase dcl2 (EC 3.6.1.-)]; n=15; Eurotiomycetidae|Rep:
Dicer-like protein 2 [Includes: Endoribonuclease dcl2 (EC
3.1.26.-); ATP-dependent helicase dcl2 (EC 3.6.1.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 1429
Score = 63.3 bits (147), Expect = 2e-09
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E LE + Y F+D++LL++A+TH S + YQRLEFLGDA+LD LI +
Sbjct: 1057 ENLENHIGYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVE 1116
Query: 73 HSPGALTDLRSALVNNTIFATL 94
G +T ++ A+VN + A L
Sbjct: 1117 CQQGEMTKIKHAIVNGHLLAFL 1138
Score = 37.1 bits (82), Expect = 0.18
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
YQR EF GD++L + + L+ + G LT+ ALV N A G Y
Sbjct: 908 YQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAY 964
>UniRef50_A7EYF3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1515
Score = 62.9 bits (146), Expect = 3e-09
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHL--YEDK 70
+ +E++L Y F +SLL++AMTH S+ T +RLEFLGDAILD +I + YE +
Sbjct: 1183 QPIEQILAYTFTKKSLLVEAMTHPSYING--TQSLERLEFLGDAILDNIIVTAMWSYETE 1240
Query: 71 RCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPG 110
H L LRSALVN A L +Y ++ G
Sbjct: 1241 LSHFQMHL--LRSALVNADFLAFLCMEMSIEQYVTDLTEG 1278
Score = 48.4 bits (110), Expect = 7e-05
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 25 DRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
DR L+ A+THAS+ LT YQRLEFLGD+IL + L + G L+ ++
Sbjct: 1015 DRGLVQTAITHASYS---LTSNYQRLEFLGDSILKLCTSVQLISEYPLWPEGYLSAMKDR 1071
Query: 85 LVNNTIFATLAARHGFHKY 103
+V+N+ + A G +Y
Sbjct: 1072 IVSNSRSSRAAVELGLDEY 1090
>UniRef50_A6SBX3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1842
Score = 62.5 bits (145), Expect = 4e-09
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
Q+E Y F+ LL A H ++ CYQRLEFLGD++LD L+ +
Sbjct: 1538 QVEMKHPYHFKHPRLLRSAFIHPAYLFIYEQIPCYQRLEFLGDSLLDMACVNFLFHNHPT 1597
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISEE 132
P LT+ + A+V+N L + GFHK+ + + +++ Y + ++ +
Sbjct: 1598 KDPQWLTEHKMAIVSNQFLGALCVKLGFHKHLLTLDSQVQKMIADY---SSDINEALIQA 1654
Query: 133 VTDSSYVQWLRTDKSR 148
TD+ V + D +R
Sbjct: 1655 KTDAKRVGKVEDDYAR 1670
>UniRef50_Q5NER3 Cluster: Ribonuclease 3; n=11; Francisella
tularensis|Rep: Ribonuclease 3 - Francisella tularensis
subsp. tularensis
Length = 230
Score = 61.7 bits (143), Expect = 7e-09
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
Y + +L Y F+D +LL++A+TH S + Y+RLEFLGD++L ++I LY+
Sbjct: 5 YSRFYNILGYNFKDYTLLIRALTHRSKTKKN----YERLEFLGDSVLSFVIAEVLYKQFI 60
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
+ G L+ LRS LV A LA+ +Y
Sbjct: 61 DLAEGKLSQLRSKLVKGATLAQLASSLKMDEY 92
>UniRef50_A1DE13 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease dcl1 (EC 3.1.26.-); ATP-dependent
helicase dcl1 (EC 3.6.1.-)]; n=5; Trichocomaceae|Rep:
Dicer-like protein 1 [Includes: Endoribonuclease dcl1 (EC
3.1.26.-); ATP-dependent helicase dcl1 (EC 3.6.1.-)] -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 1538
Score = 61.7 bits (143), Expect = 7e-09
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRN--VLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+E L Y F LL A+TH S CYQRLEFLGD++LD + L+
Sbjct: 1257 VEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRRFPD 1316
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK 120
P LT+ + A+V+N L+ + GFH+ S L + YV+
Sbjct: 1317 RDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVE 1364
>UniRef50_Q67PF5 Cluster: Ribonuclease 3; n=1; Symbiobacterium
thermophilum|Rep: Ribonuclease 3 - Symbiobacterium
thermophilum
Length = 235
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 19 LQYRFRDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGA 77
L Y FRD SLLL+A+TH ++ + + +RLEFLGD++L +I HLYE G
Sbjct: 18 LGYEFRDESLLLEALTHTTYANEHPRARANERLEFLGDSVLGMVIAAHLYERYPDLPEGE 77
Query: 78 LTDLRSALVNNTIFATLAARHGFHKYFR 105
LT +R+A+V A A G ++ R
Sbjct: 78 LTKIRAAVVCEPSLAERARVLGIGRHMR 105
>UniRef50_Q88WK0 Cluster: Ribonuclease 3; n=5; Lactobacillales|Rep:
Ribonuclease 3 - Lactobacillus plantarum
Length = 231
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 23 FRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALT 79
F D LL +A T AS+ H++ Y+R+EFLGDA+L+ +++ +LY+ + G LT
Sbjct: 17 FNDPDLLAEAFTQASYVNEHQDQQLKYYERVEFLGDAVLELVVSEYLYKRYKDMPQGKLT 76
Query: 80 DLRSALVNNTIFATLAARHGFHKYFR 105
LR+A+V FA+ A F +Y R
Sbjct: 77 RLRAAMVCEESFASFARECDFPQYIR 102
>UniRef50_Q0F3I4 Cluster: Ribonuclease III; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ribonuclease III - Mariprofundus
ferrooxydans PV-1
Length = 229
Score = 60.9 bits (141), Expect = 1e-08
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 11 GYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDK 70
G +QL++V+ YRF + +LL +A+TH S R+ ++ +RLEFLGDA+L ++ +L++
Sbjct: 7 GLQQLQQVIGYRFNNPALLKRALTHCSALRSAVSGDLERLEFLGDAVLGLVVAEYLHQSF 66
Query: 71 RCHSPGALTDLRSALV 86
G L+ +R+ LV
Sbjct: 67 PEEPEGQLSRMRANLV 82
>UniRef50_Q2U0L3 Cluster: DsRNA-specific nuclease Dicer and related
ribonucleases; n=1; Aspergillus oryzae|Rep:
DsRNA-specific nuclease Dicer and related ribonucleases -
Aspergillus oryzae
Length = 1256
Score = 60.5 bits (140), Expect = 2e-08
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE +L Y F D+SL +++MTH S T Y+RL FLG I++ ++ R+L+ K S
Sbjct: 1018 LEALLGYTFSDKSLAIESMTHPSCVGLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTS 1077
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHK 102
L L+SA+ NN A L + K
Sbjct: 1078 SKRLQSLKSAVTNNMFLAFLCLTFHWEK 1105
Score = 41.9 bits (94), Expect = 0.006
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
++ + F+GDAI+ +LITR L+ G LT ++ ++V++T A GF Y
Sbjct: 865 FRSMAFIGDAIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSY 921
>UniRef50_Q1DW80 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)]; n=2; Coccidioides
immitis|Rep: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)] - Coccidioides immitis
Length = 1478
Score = 60.1 bits (139), Expect = 2e-08
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
++E ++ Y F+ + LLL A+TH S + YQRLEF+GD+ILD ++ + L+E RC
Sbjct: 1186 EIEGLVGYTFKKKPLLLAAVTHPSSKGS--GHSYQRLEFVGDSILDIIVVQELFESPRCF 1243
Query: 74 SPGALTDLRSALVNNTIFATL 94
+ +R+ALVN A L
Sbjct: 1244 HHFDMHLMRTALVNADFLAFL 1264
Score = 38.7 bits (86), Expect = 0.058
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 23 FRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLR 82
F + SL+L A++ ++ YQRLEFLGD++L + L D G LT +
Sbjct: 1012 FSNLSLVLTAISSSAARE---ASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRK 1068
Query: 83 SALVNNTIFATLAARHGFHKY 103
+V+N A A + G K+
Sbjct: 1069 GNIVSNGYLANAALQTGLDKF 1089
>UniRef50_Q9FKF0 Cluster: Emb|CAB88120.1; n=1; Arabidopsis
thaliana|Rep: Emb|CAB88120.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 957
Score = 59.7 bits (138), Expect = 3e-08
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
++ E +E++L Y F +++LL +A+T S + RLEF GD+IL+ T ++
Sbjct: 1 MNSVEAVEKILNYSFVNKTLLKEAITQKS-------PLFDRLEFFGDSILEVAFTNYICH 53
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVK 120
L DLR+A V+N FA +A H H + +P L + +K + +
Sbjct: 54 TYPNLKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAE 105
Score = 46.8 bits (106), Expect = 2e-04
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E +E++L Y F +++LL + +TH + + +Q L F+G++ L T+HLY
Sbjct: 416 EAVEKILNYSFVNKTLLKELLTHNN------SPLFQGLMFVGESALSLAFTKHLYLTYPM 469
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKI 121
P L+ LR A + +A +A + G ++ F P ++ ++++
Sbjct: 470 LEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIEL 518
>UniRef50_A6R2T0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1437
Score = 59.7 bits (138), Expect = 3e-08
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
++++E ++ Y F + L+QA TH S+ + T YQRLEF+GDAILD++I HL+ R
Sbjct: 1097 FQEVESLVGYVFNKKVFLVQAFTHPSNPGSK-TSSYQRLEFVGDAILDHIIVHHLFNAPR 1155
Query: 72 CHSPGALTDLRSALVNNTIFATL 94
+ +R+AL N A L
Sbjct: 1156 ALPHFDMHLMRTALANADFLAFL 1178
Score = 39.1 bits (87), Expect = 0.044
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 23 FRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLR 82
F D SL++ A++ AS R YQR+EFLGD+IL + T L G L+ +
Sbjct: 924 FTDLSLVITAIS-ASVAREATN--YQRIEFLGDSILKFQTTLQLTATNLIWHEGLLSRAK 980
Query: 83 SALVNNTIFATLAARHGFHKY 103
+V+N + A G K+
Sbjct: 981 DTVVSNKRLSYAAIEAGLDKF 1001
>UniRef50_Q8RGX3 Cluster: Ribonuclease 3; n=3; Fusobacterium
nucleatum|Rep: Ribonuclease 3 - Fusobacterium nucleatum
subsp. nucleatum
Length = 234
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHAS---HHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
LE L Y F DR+LL A+ H S + +RLE LGDA+LD ++ +LY+ +
Sbjct: 7 LEHKLNYYFNDRNLLKNALLHKSLGNERKEYKNQTNERLELLGDAVLDLIVAEYLYKSYK 66
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
S G + L++ +V+ I A ++ + G K+
Sbjct: 67 NASEGPIAKLKAMIVSEPILAKISRQIGVGKF 98
>UniRef50_Q9KA05 Cluster: Ribonuclease 3; n=38; Bacilli|Rep:
Ribonuclease 3 - Bacillus halodurans
Length = 263
Score = 59.7 bits (138), Expect = 3e-08
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
+++L R L F ++ LL+QA TH+S+ HR +RLEFLGDA+L+ ++++LY+
Sbjct: 35 FDELLRTLNLTFANKKLLVQAFTHSSYVNEHRIQSCKDNERLEFLGDAVLELAVSQYLYK 94
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLA 95
S G +T LR+++V A LA
Sbjct: 95 AFEQMSEGDMTKLRASIVCEPSLAQLA 121
>UniRef50_Q2VF19 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease DCL-1 (EC 3.1.26.-); ATP-dependent
helicase DCL-1 (EC 3.6.1.-)]; n=2; Sordariomycetes|Rep:
Dicer-like protein 1 [Includes: Endoribonuclease DCL-1
(EC 3.1.26.-); ATP-dependent helicase DCL-1 (EC 3.6.1.-)]
- Cryphonectria parasitica (Chesnut blight fungus)
(Endothiaparasitica)
Length = 1548
Score = 59.7 bits (138), Expect = 3e-08
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 8 ELHGYEQLERVLQYRFRDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHL 66
EL +++ Y+F+ +L A H S + YQRLEFLGDA+ D +L
Sbjct: 1244 ELDMAQKIHEATGYQFKHPRVLRSAFRHPSRPYVFDKVPHYQRLEFLGDALFDMACVDYL 1303
Query: 67 YEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYV 119
+ P LT+ + A+V+N LA GFHK+ H + + +YV
Sbjct: 1304 FHIAPDEGPQWLTEHKMAMVSNQFLGCLAVSLGFHKFILHHHASIGSQIHEYV 1356
>UniRef50_A0LGM1 Cluster: Ribonuclease III; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: Ribonuclease III -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 242
Score = 59.3 bits (137), Expect = 4e-08
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 11 GYEQLERVLQYRFRDRSLLLQAMTHASH-HRNVLTD--CYQRLEFLGDAILDYLITRHLY 67
G E L+ +L YRF D LL +A+ H S+ H N D + LEFLGDA+L I+ L
Sbjct: 6 GLEALQNLLGYRFGDEGLLHRALVHRSYLHENPHLDEKDNETLEFLGDAVLGLAISHFLL 65
Query: 68 EDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
E ++ G L+ LRSA+VN +A +Y
Sbjct: 66 EQFPDYNEGELSRLRSAIVNERELTRIAVELNLGEY 101
>UniRef50_A6SDY7 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1398
Score = 59.3 bits (137), Expect = 4e-08
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
+E++L Y F +SLL++AMTH S+ T +RLEFLGD+ILD +I ++ S
Sbjct: 1090 VEQILAYTFTKKSLLVEAMTHPSYTSG--TQSLERLEFLGDSILDNIIVTAMWSHSTPLS 1147
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLN 112
+ LRSALVN A L + +++ G N
Sbjct: 1148 HFHMHLLRSALVNADFLAFLCMEMSIDQNVTNLTEGKN 1185
Score = 47.2 bits (107), Expect = 2e-04
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 25 DRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
D+SL+ A+THAS+ L YQRLEFLGD+IL + L + G L+ ++
Sbjct: 966 DQSLIQTAITHASYS---LDSNYQRLEFLGDSILKLCTSVQLVAEHLDWHEGYLSAMKDR 1022
Query: 85 LVNNTIFATLAARHGFHKY 103
+V+N+ + AA G +Y
Sbjct: 1023 IVSNSRSSRAAAEVGLDEY 1041
>UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio
bacteriovorus|Rep: Ribonuclease 3 - Bdellovibrio
bacteriovorus
Length = 234
Score = 59.3 bits (137), Expect = 4e-08
Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 11 GYEQLERVLQYRFRDRSLLLQAMTH---ASHHRNVLTDCYQRLEFLGDAILDYLITRHLY 67
G + LE + ++F++ +LL +A+TH A+ RN + + ++LEFLGDA+LD ++ LY
Sbjct: 5 GRKSLEERVGHQFKNPALLERALTHKSFANELRNTV-EHNEKLEFLGDAVLDLVVGEFLY 63
Query: 68 EDKRCHSPGALTDLRSALVNNTIFATLAARHGFHK 102
E + G L+ R+++VN + + LA G +K
Sbjct: 64 EKFPTDTEGGLSKKRASIVNEEVLSELALEMGLNK 98
>UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121;
Proteobacteria|Rep: Ribonuclease 3 - Methylococcus
capsulatus
Length = 230
Score = 58.8 bits (136), Expect = 5e-08
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
+ +E L R L FRD LL A+TH S V + RLEFLGD++L +++T +LY+
Sbjct: 2 IRSHEHLARKLGIPFRDPGLLRNALTHRSAE-GVNNE---RLEFLGDSVLGFVVTEYLYQ 57
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLA 95
G L+ LR+ LVN T A +A
Sbjct: 58 RFPSADEGVLSRLRATLVNETSLARIA 84
>UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27;
Epsilonproteobacteria|Rep: Ribonuclease 3 -
Helicobacter hepaticus
Length = 240
Score = 58.8 bits (136), Expect = 5e-08
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE+ L Y F+++ LLL+A+TH S + + RLEFLGDA+LD L+ +L++
Sbjct: 13 LEKKLGYVFQNQQLLLEALTHKSCKKQYNNE---RLEFLGDAVLDLLVGEYLFKKFPLAK 69
Query: 75 PGALTDLRSALVNNTIFATLA 95
G L+ LR+ +VN F LA
Sbjct: 70 EGELSKLRACIVNEKGFMKLA 90
>UniRef50_Q7WD32 Cluster: Ribonuclease 3; n=62; Proteobacteria|Rep:
Ribonuclease 3 - Bordetella bronchiseptica (Alcaligenes
bronchisepticus)
Length = 256
Score = 58.8 bits (136), Expect = 5e-08
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE L +RF D++LL QA+TH SH +RLEFLGD++L++++ L+E
Sbjct: 9 LETRLDHRFGDKALLEQALTHRSHGARH----NERLEFLGDSVLNFVVAAMLFERYGKLD 64
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G L+ LR+ LV A +A R +Y R
Sbjct: 65 EGDLSRLRANLVKQASLADIAQRLDLSQYLR 95
>UniRef50_Q7S8J7 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease dcl-1 (EC 3.1.26.-); ATP-dependent
helicase dcl-1 (EC 3.6.1.-)]; n=2; Neurospora crassa|Rep:
Dicer-like protein 1 [Includes: Endoribonuclease dcl-1
(EC 3.1.26.-); ATP-dependent helicase dcl-1 (EC 3.6.1.-)]
- Neurospora crassa
Length = 1584
Score = 58.8 bits (136), Expect = 5e-08
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 21 YRFRDRSLLLQAMTHASHHRNV-LTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALT 79
Y+F+ LL A H ++ YQRLEFLGDA+ D + +L+ P LT
Sbjct: 1267 YKFKHPRLLRAAFQHPTYPSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLT 1326
Query: 80 DLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISEEVTDS 136
+ + A+V+N L+ GF+K MSP + + + +YV EE + +E ++
Sbjct: 1327 EHKMAMVSNQFLCCLSFHLGFNKCIATMSPSILKDIAEYVTEIEEALETAKQEAINA 1383
>UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus
hydrogenoformans Z-2901|Rep: Ribonuclease 3 -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 235
Score = 58.4 bits (135), Expect = 7e-08
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
LE++L + F + S+LL A+TH S+ H + +RLEFLGDA+L+ I+ +L+
Sbjct: 9 LEKILGFNFNNPSILLSAITHPSYAFEHPEEGIEHNERLEFLGDAVLELFISDYLFRTFP 68
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
S G LT LRS LV LA + K+ R
Sbjct: 69 QKSEGDLTKLRSRLVCAESLYELAFKINLDKFLR 102
>UniRef50_Q2GNP6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1227
Score = 58.0 bits (134), Expect = 9e-08
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLY--EDKR 71
QLE ++ Y F ++LL++AMTH S + + RLEFLGDAILDY++ L+ D
Sbjct: 1116 QLESLVGYTFTKKALLVEAMTHPSCNGPGIRASLDRLEFLGDAILDYVVVNKLFAISDPA 1175
Query: 72 CHSPGALTDLRSALVNNTIFATL 94
+L LR+ALVN I L
Sbjct: 1176 PLENSSLHLLRTALVNADILGFL 1198
Score = 47.2 bits (107), Expect = 2e-04
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 17 RVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPG 76
R+ Q D SL++ A+T AS R TD Y+R+EFLGD+IL + T + G
Sbjct: 937 RLEQTGITDLSLIVTAIT-ASAARGP-TD-YERIEFLGDSILKFCTTINCSATYLKFPEG 993
Query: 77 ALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENGHSISE 131
L+ L+ +V+N+ A G +Y H + L++ YV+ EN S +E
Sbjct: 994 CLSPLKDKIVSNSRLFRAAVDFGLDRYIIHKAFTLHKWRPTYVEDLIENPPSATE 1048
>UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2;
Chloroflexus|Rep: Ribonuclease III, bacterial -
Chloroflexus aurantiacus J-10-fl
Length = 244
Score = 57.6 bits (133), Expect = 1e-07
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHAS------HHRNVLTDCYQRLEFLGDAILDYLITRHLY 67
+LER + FRDR+LL A H S H N LTD +RLEFLGD++L ++ T L+
Sbjct: 7 ELERAIGITFRDRTLLQTAFMHRSLFNEQPHLLNHLTD-NERLEFLGDSVLHFVTTTWLF 65
Query: 68 EDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
E LT+ R+ALV+ A AA+ +Y
Sbjct: 66 ETFPDQDEATLTNWRAALVSTKGLAECAAQFNLGQY 101
>UniRef50_Q6ANV0 Cluster: Ribonuclease 3; n=1; Desulfotalea
psychrophila|Rep: Ribonuclease 3 - Desulfotalea
psychrophila
Length = 241
Score = 57.6 bits (133), Expect = 1e-07
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 3 ECVERELHGYEQLERVLQYRFRDRSLLLQAMTHASH--HRNVLTDCYQRLEFLGDAILDY 60
E + R + + E+ + Y+F D LL +A+ H+S+ + +RLEF+GDA+LD
Sbjct: 7 ELIRRNRQKHAEFEKKINYKFIDLRLLQKALIHSSYAFEQAQAGKNNERLEFVGDAVLDL 66
Query: 61 LITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
++ LY G LT LR+ALVN AT+A +
Sbjct: 67 VVGNALYRRFPEMREGELTRLRAALVNEGHLATMARK 103
>UniRef50_Q7UGZ7 Cluster: Ribonuclease 3; n=3;
Planctomycetaceae|Rep: Ribonuclease 3 - Rhodopirellula
baltica
Length = 266
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E+ + +L Y FRD LL A+THAS + L +RLEFLGD++L + L+ +
Sbjct: 35 ERCQEILGYDFRDLDLLRSALTHASGASHRLAS-NERLEFLGDSVLGLTVCEWLFNEYPE 93
Query: 73 HSPGALTDLRSALVNNTIFATLAARHG 99
+S G LT ++SA+V+ +A + G
Sbjct: 94 YSEGDLTKIKSAVVSRRSCGKVACKLG 120
>UniRef50_Q7SCC1 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease dcl-2 (EC 3.1.26.-); ATP-dependent
helicase dcl-2 (EC 3.6.1.-)]; n=2; Neurospora crassa|Rep:
Dicer-like protein 2 [Includes: Endoribonuclease dcl-2
(EC 3.1.26.-); ATP-dependent helicase dcl-2 (EC 3.6.1.-)]
- Neurospora crassa
Length = 1539
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHAS-HHRNVLTDCYQRLEFLGDAILDYLITRHL 66
E LE+ + Y F +SLL++AMTH S CY+RLEFLGDAILD ++ + L
Sbjct: 1159 EPLEKAMDYTFNKKSLLIEAMTHPSCAGLGTNESCYERLEFLGDAILDVIVVKRL 1213
>UniRef50_Q0UI93 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)]; n=1; Phaeosphaeria
nodorum|Rep: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)] - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 1522
Score = 57.2 bits (132), Expect = 2e-07
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHH---RNVLTDCYQRLEFLGDAILDYLITRHLYEDK 70
++E YRFR LL A H S N+ + YQRLEFLGD++LD HL+
Sbjct: 1224 KIEMKHPYRFRYPRLLRSAFIHPSQPFMWENIPS--YQRLEFLGDSLLDMAFIMHLFYKY 1281
Query: 71 RCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
P LT+ ++ +V+N + + G+H + + + L+ ++ YV EE
Sbjct: 1282 PDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHTHMKQNTAILSSQIRDYVYEVEE 1335
>UniRef50_Q98R47 Cluster: RIBONUCLEASE III; n=1; Mycoplasma
pulmonis|Rep: RIBONUCLEASE III - Mycoplasma pulmonis
Length = 241
Score = 56.8 bits (131), Expect = 2e-07
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 24 RDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH--SPGALTDL 81
+++++ QA TH + H Y+ LEFLGDAIL ++ +++++ + +PG T +
Sbjct: 35 KEKNIFFQAFTHTTFHNLYKAKSYEMLEFLGDAILQKNVSEYIFKNTESNKINPGTATLI 94
Query: 82 RSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLK 116
RS LVN T + LA K F + G E++K
Sbjct: 95 RSKLVNKTCLSNLAKELKLDK-FLLLPKGQEELVK 128
>UniRef50_Q1Q4S0 Cluster: Similar to ribonuclease III; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
ribonuclease III - Candidatus Kuenenia stuttgartiensis
Length = 236
Score = 56.8 bits (131), Expect = 2e-07
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 16 ERVLQYRFRDRSLLLQAMTHASHH-RNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
+ ++ Y F+ LL +A+TH S N ++ +RLEFLGDA+L +I+ +LY+ +S
Sbjct: 17 QNIIGYSFKKMLLLEKALTHTSCRVENNFSN--ERLEFLGDAVLGMIISDYLYKTMPHYS 74
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNE 113
G LT+++S +V+ + A + G K F + GLN+
Sbjct: 75 EGELTNVKSVVVSQSTLAKVGMEAGL-KEFLLVGRGLND 112
>UniRef50_Q8XJN8 Cluster: Ribonuclease 3; n=20; Bacteria|Rep:
Ribonuclease 3 - Clostridium perfringens
Length = 237
Score = 56.8 bits (131), Expect = 2e-07
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRC 72
++E+++ F ++ +L+ A+TH+S+ Y +RLEFLGD++L +T++L+ + +
Sbjct: 8 EVEKLIGIEFENKGVLITALTHSSYANQFKDVKYNERLEFLGDSVLQLCVTKYLFNNYKD 67
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPG 110
S G LT +R+ +V ++ KY R MS G
Sbjct: 68 KSEGELTKIRALVVCENSLHKVSKNLSLGKYIR-MSKG 104
>UniRef50_Q2GCL4 Cluster: Ribonuclease III; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribonuclease III -
Neorickettsia sennetsu (strain Miyayama)
Length = 222
Score = 56.4 bits (130), Expect = 3e-07
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E+L+ +L F+++ LL++A+TH S + Y+RLEFLGDA+L+ +I LY+
Sbjct: 4 EELQSLLGVYFKNKDLLVEALTHPSVEK---CPSYERLEFLGDAVLNLVIASMLYDLFPG 60
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G L+ +SAL+ A LA + Y R
Sbjct: 61 DPEGRLSHRQSALICKNTLAMLARQMNLGDYIR 93
>UniRef50_Q0YHA5 Cluster: Ribonuclease III; n=1; Geobacter sp.
FRC-32|Rep: Ribonuclease III - Geobacter sp. FRC-32
Length = 238
Score = 56.4 bits (130), Expect = 3e-07
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHAS---HHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
LE+++ Y F D+SLL++A+TH S + QRLEFLGDA++ +++ L+
Sbjct: 12 LEKLINYDFTDKSLLVEALTHPSFVNESGGKVRQDNQRLEFLGDAVVGLVLSHDLFSRFP 71
Query: 72 CHSPGALTDLRSALVNNTIFATLA 95
G LT LR++LV+ A LA
Sbjct: 72 DSREGELTKLRASLVDEASLAILA 95
>UniRef50_A1AWQ6 Cluster: Ribonuclease III; n=2; sulfur-oxidizing
symbionts|Rep: Ribonuclease III - Ruthia magnifica
subsp. Calyptogena magnifica
Length = 221
Score = 56.4 bits (130), Expect = 3e-07
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
++L++ + Y+F+D SLL A+TH S +N +RLEFLGD+IL +I++ LY+
Sbjct: 2 KKLQKKINYQFKDLSLLKLALTHCSMGKNN----NERLEFLGDSILGVIISKELYQRFPN 57
Query: 73 HSPGALTDLRSALVNNTIFATLAA 96
G L+ LRS LV + L+A
Sbjct: 58 IDEGKLSRLRSHLVRDQTLTQLSA 81
>UniRef50_A0L633 Cluster: Ribonuclease III; n=1; Magnetococcus sp.
MC-1|Rep: Ribonuclease III - Magnetococcus sp. (strain
MC-1)
Length = 246
Score = 56.4 bits (130), Expect = 3e-07
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 6 ERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRN-------VLTDCYQRLEFLGDAIL 58
+RE G E+LE+ L YRF LL A+TH S + V T +RLEFLGD++L
Sbjct: 4 QREPSGLERLEQALDYRFTQSDLLQLALTHRSAPLDGSKAGEVVATTHNERLEFLGDSVL 63
Query: 59 DYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
+ +++ LY+ G L+ R+ LVN + +A +Y R
Sbjct: 64 NLIVSHRLYKRFGEVPEGQLSQWRAMLVNTRSLSEVAKDLELGRYLR 110
>UniRef50_Q72C44 Cluster: Ribonuclease 3; n=4;
Desulfovibrionaceae|Rep: Ribonuclease 3 - Desulfovibrio
vulgaris (strain Hildenborough / ATCC 29579 / NCIMB8303)
Length = 253
Score = 56.4 bits (130), Expect = 3e-07
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 4 CVERE-LHGYEQLERVLQYRFRDRSLLLQAMTHAS--HHRNVLTDCYQRLEFLGDAILDY 60
C R+ + ++L++ + +RF D LLL AMTH+S + + V + +RLEFLGDA+L+
Sbjct: 20 CYRRDNVKPVDELQKTIGHRFGDMELLLTAMTHSSWANEQAVPVEHNERLEFLGDAVLEL 79
Query: 61 LITRHLYEDKRCHSPGALTDLRSALVN 87
++ L+ G LT +RS LV+
Sbjct: 80 CVSEELFRRFPSAREGDLTRMRSRLVS 106
>UniRef50_A6C1C3 Cluster: Ribonuclease III; n=1; Planctomyces maris
DSM 8797|Rep: Ribonuclease III - Planctomyces maris DSM
8797
Length = 247
Score = 56.0 bits (129), Expect = 4e-07
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E+ ++ L YRF D LL +TH S + + D +RLEFLGDAIL ++ L++
Sbjct: 15 EECQQNLGYRFVDCELLKSCLTHTSAAKTRM-DSNERLEFLGDAILGSIVCEKLFDQFPN 73
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKY 103
G LT ++SA+V+ LA G ++
Sbjct: 74 APEGELTRIKSAVVSRNTCTRLAREKGLDRF 104
>UniRef50_Q74AX1 Cluster: Ribonuclease 3; n=4; Geobacter|Rep:
Ribonuclease 3 - Geobacter sulfurreducens
Length = 248
Score = 56.0 bits (129), Expect = 4e-07
Identities = 38/96 (39%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY---QRLEFLGDAILDYLITRHLYED 69
E LE + YRF DR L +A+TH S V + +RLEF GDAIL + I + L
Sbjct: 17 EGLETSIGYRFTDRRFLDEALTHRSWLNEVRSPTVPDNERLEFFGDAILGFCIGKMLLRH 76
Query: 70 KRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
GAL ++SALV A LAA Y R
Sbjct: 77 YPESREGALARMKSALVGEETLADLAAAVELGSYLR 112
>UniRef50_A7B5M4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 252
Score = 55.2 bits (127), Expect = 6e-07
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTD---CYQRLEFLGDAILDYLITRHLYED 69
++LE+ + Y F+D SLL QAM H+S+ + C +RLEFLGDA+L+ + + L+ +
Sbjct: 29 KELEKKIGYEFQDFSLLEQAMMHSSYTNEKHLEKYHCNERLEFLGDAVLELVSSEFLFLE 88
Query: 70 KRCHSPGALTDLRSALV 86
S G LT R+++V
Sbjct: 89 SPKVSEGKLTKTRASMV 105
>UniRef50_A5EV51 Cluster: Ribonuclease III; n=1; Dichelobacter
nodosus VCS1703A|Rep: Ribonuclease III - Dichelobacter
nodosus (strain VCS1703A)
Length = 233
Score = 55.2 bits (127), Expect = 6e-07
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
++ LE L Y F++ LL +A+TH R+ D +R E+LGDA+L+ +I+ LY
Sbjct: 9 WQLLEHALGYSFQNPELLQRALTH----RSFSADHNERFEYLGDALLETVISVALYRRYP 64
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G LT LR+A+V ++ A +A + +Y R
Sbjct: 65 ESPEGDLTRLRAAIVKSSSLAVIAKQLDLGRYLR 98
>UniRef50_A4J683 Cluster: Ribonuclease III; n=1; Desulfotomaculum
reducens MI-1|Rep: Ribonuclease III - Desulfotomaculum
reducens MI-1
Length = 246
Score = 55.2 bits (127), Expect = 6e-07
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHAS--HHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDK 70
+L+ L +++ + +LL+QA+TH+S H C+ QRLEFLGDA+L+ +I+ HLY+
Sbjct: 10 RLKTRLGFKWHNPTLLIQALTHSSCVHENRGHGLCHNQRLEFLGDAVLELIISEHLYKMF 69
Query: 71 RCHSPGALTDLRSALVNNTIFATLA 95
+ G LT +R++ V A +A
Sbjct: 70 PDRTEGELTKMRASSVCEPSLAKVA 94
>UniRef50_Q5FJJ7 Cluster: Ribonuclease 3; n=8; Lactobacillus|Rep:
Ribonuclease 3 - Lactobacillus acidophilus
Length = 228
Score = 55.2 bits (127), Expect = 6e-07
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDC---YQRLEFLGDAILDYLITRHLYEDK 70
+L+ F + LL +A TH+S+ D Y++LEFLGDA+L+ ++ +LY
Sbjct: 9 KLKNEYNIEFNNEKLLEEAFTHSSYSNEHPDDGIRDYEKLEFLGDAVLELAVSNYLYRHY 68
Query: 71 RCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPG 110
+ G LT LRS +V F+ A GF K H+ G
Sbjct: 69 PKLNEGELTRLRSNIVRTEGFSEFAIECGFQKEI-HLGNG 107
>UniRef50_Q97IA4 Cluster: Ribonuclease 3; n=3; Clostridium|Rep:
Ribonuclease 3 - Clostridium acetobutylicum
Length = 230
Score = 55.2 bits (127), Expect = 6e-07
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
E+LE L F++ +LL+ A+TH+S+ + N + +RLEFLGDA+L I+ + ++
Sbjct: 8 EELESKLGIEFQNINLLVTALTHSSYANENKNAEYNERLEFLGDAVLQLSISEYFFKKYP 67
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPG 110
S G LT R+ +V ++ R KY R MS G
Sbjct: 68 TISEGELTKKRALVVCGMSLHSIGERWQLGKYIR-MSHG 105
>UniRef50_Q2H0G2 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)]; n=1; Chaetomium
globosum|Rep: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)] - Chaetomium globosum (Soil
fungus)
Length = 1607
Score = 55.2 bits (127), Expect = 6e-07
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 4 CVERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNV-LTDCYQRLEFLGDAILDYLI 62
C +L + E + Y F LL A H ++ YQRLEFLGDA+LD
Sbjct: 1264 CNSTQLDMAARFEARMGYAFTHPRLLRSAFQHPTYPSVYEKLPSYQRLEFLGDALLDMAS 1323
Query: 63 TRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQ 122
L+ P LT+ + A+V+N LA GFH+ + + + + + +YV
Sbjct: 1324 VEFLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYLGFHRAISYCASAIQKEITEYVTEI 1383
Query: 123 EENGHSISEEVT 134
E+ S ++ +
Sbjct: 1384 EDALQSARDDAS 1395
>UniRef50_Q1JXG8 Cluster: Ribonuclease III; n=1; Desulfuromonas
acetoxidans DSM 684|Rep: Ribonuclease III -
Desulfuromonas acetoxidans DSM 684
Length = 244
Score = 54.8 bits (126), Expect = 8e-07
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTD---CYQRLEFLGDAILDYLITRHLYEDK 70
Q E L YRF DR L A+ H S+ L D C +R EFLGDA+LD ++ +L+
Sbjct: 15 QFEERLGYRFTDRHYLQTALIHKSYANEQLRDPAACNERQEFLGDAVLDLVMADYLFCTY 74
Query: 71 RCHSPGALTDLRSALVNNTIFATLAAR 97
G L+ +RS LV+ A +A R
Sbjct: 75 PQLPEGELSRIRSELVSARALAKVARR 101
>UniRef50_Q6BCJ9 Cluster: Dicer-related RNase III protein Dcr2p; n=2;
Tetrahymena thermophila|Rep: Dicer-related RNase III
protein Dcr2p - Tetrahymena thermophila
Length = 1838
Score = 54.8 bits (126), Expect = 8e-07
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 46 CYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
C QRLEFLGDA+LD +I +L+ PG LT ++++LV N + GF+K+
Sbjct: 1621 CNQRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKF 1678
Score = 32.7 bits (71), Expect = 3.8
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 27 SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
S L++++T + N +R EFLGD +L L + +Y + L R+ ++
Sbjct: 1307 SELMKSLTSLEYAVNNKESSLERYEFLGDTVLKCLSSTQIYFEHPKSMEDHLHVHRTIII 1366
Query: 87 NNTIFATLAARHGFHKY 103
N A +A + KY
Sbjct: 1367 QNRNLAQIAVKKKIFKY 1383
>UniRef50_A1HN82 Cluster: Ribonuclease III; n=4; Clostridia|Rep:
Ribonuclease III - Thermosinus carboxydivorans Nor1
Length = 243
Score = 54.4 bits (125), Expect = 1e-06
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 23 FRDRSLLLQAMTHASHHRNVL--TDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTD 80
F D LL QA+ H S+ V + +RLEFLGDA+L+ +I+ +LY + G LT
Sbjct: 24 FNDLGLLHQALVHTSYANEVKGGVEHNERLEFLGDAVLELIISEYLYRNFPELPEGELTK 83
Query: 81 LRSALVNNTIFATLAARHGFHKY 103
R+ LV A A+R G KY
Sbjct: 84 ARARLVCEPSLAQCASRLGLGKY 106
>UniRef50_A0NL28 Cluster: Ribonuclease III; n=3;
Leuconostocaceae|Rep: Ribonuclease III - Oenococcus oeni
ATCC BAA-1163
Length = 243
Score = 54.4 bits (125), Expect = 1e-06
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 23 FRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALT 79
F ++ LLL+A T ++ H YQRLEFLGD+++ ++ +L+ G LT
Sbjct: 28 FANQDLLLEAFTQGNYLNEHPEEKGRDYQRLEFLGDSVMQLIVADYLFTRYPDWEEGQLT 87
Query: 80 DLRSALVNNTIFATLAARHGFHKYFR 105
++R A+V + F+ A GF++Y R
Sbjct: 88 EMRIAMVQSKSFSHFARLAGFNRYIR 113
>UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp.
PCC 6803|Rep: Ribonuclease 3 - Synechocystis sp.
(strain PCC 6803)
Length = 231
Score = 54.4 bits (125), Expect = 1e-06
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 25 DRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRS 83
D L L+A+TH S+ + + T Y RLEFLGDA+L +++ R L+E + LT LRS
Sbjct: 11 DPQLKLEALTHRSYCNEHPGTPSYDRLEFLGDAVLGFVVGRILFERYPHFTEAELTRLRS 70
Query: 84 ALVNNTIFATLA 95
LVN A LA
Sbjct: 71 QLVNQNQLAYLA 82
>UniRef50_A6PN64 Cluster: Ribonuclease III; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribonuclease III -
Victivallis vadensis ATCC BAA-548
Length = 232
Score = 54.0 bits (124), Expect = 1e-06
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHH-RNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
E+L++ L + + L +A+TH S+ N L QRLEFLGDA+L+ ++T +L+
Sbjct: 6 EELKKRLGFAGPWSNRLAEAVTHRSYAVENNLGYDNQRLEFLGDAVLEIILTEYLFHLYP 65
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
+ G +T +RSALV A LA R +Y
Sbjct: 66 DAAEGEMTKIRSALVREPALARLARRFELGEY 97
>UniRef50_Q5L6E3 Cluster: Ribonuclease 3; n=8; Chlamydiaceae|Rep:
Ribonuclease 3 - Chlamydophila abortus
Length = 237
Score = 54.0 bits (124), Expect = 1e-06
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNV--LTDCYQRLEFLGDAILDYLITRHLYEDK 70
+++E L + F LL+ A+TH S+ +T+ +RLEFLGDA+L ++T HL+
Sbjct: 8 KEVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHLFLLF 67
Query: 71 RCHSPGALTDLRSALVN 87
G L+ R+AL+N
Sbjct: 68 PSMDEGTLSTARAALIN 84
>UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:
Ribonuclease III - Roseiflexus sp. RS-1
Length = 237
Score = 53.6 bits (123), Expect = 2e-06
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASH-----HRNVLTDCYQRLEFLGDAILDYLITRHLY 67
++L L F D+ LL QA+TH+S + D +RLEFLGDAI+++L R ++
Sbjct: 6 DELSARLGVTFSDQRLLEQALTHSSFLNEHVEERMHLDSNERLEFLGDAIINFLAARLVF 65
Query: 68 EDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
E G LT R+AL+ A A R+ Y
Sbjct: 66 ERFPDAGEGELTAWRTALIRTETLAGFAQRYNLGAY 101
>UniRef50_A1WT17 Cluster: Ribonuclease III; n=2;
Gammaproteobacteria|Rep: Ribonuclease III -
Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 234
Score = 53.2 bits (122), Expect = 3e-06
Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
E+L++ L Y+F + L +A+TH R+ +RLEFLGD++L++++ ++ +
Sbjct: 5 ERLQQRLDYQFLELERLQEAVTH----RSAGGRHNERLEFLGDSVLNFVVAHEVFHRRPT 60
Query: 73 HSPGALTDLRSALVNNTIFATLA 95
S G L+ LR++LVN + A +A
Sbjct: 61 DSEGTLSRLRASLVNRSSLAAIA 83
>UniRef50_A6DSV3 Cluster: Ribonuclease III; n=1; Lentisphaera
araneosa HTCC2155|Rep: Ribonuclease III - Lentisphaera
araneosa HTCC2155
Length = 232
Score = 52.8 bits (121), Expect = 3e-06
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHH---RNVLTDCYQRLEFLGDAILDYLITRHLYE 68
++ LE L+ +F +LL +A+TH S+ + L D QRLEFLGDA+++ +++R+L++
Sbjct: 5 FKVLEDNLKCKFNQPTLLREALTHRSYKFESKEPLND-NQRLEFLGDAVIELIVSRYLFD 63
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
G LT R+ALV + A KY
Sbjct: 64 RYPDAPEGDLTKYRAALVKESALFECAKSIKLGKY 98
>UniRef50_Q7KNF1 Cluster: Ribonuclease; n=8; Coelomata|Rep:
Ribonuclease - Drosophila melanogaster (Fruit fly)
Length = 1327
Score = 52.8 bits (121), Expect = 3e-06
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 4 CVE--RELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLT-DCYQRLEFLGDAILDY 60
C++ R L + E + +F+ LL +A T S LT QRLEFLGD +L
Sbjct: 965 CIDSYRVLKELTKFEDSIGIKFKHIRLLARAFTDRSIGFTHLTLGSNQRLEFLGDTVLQL 1024
Query: 61 LITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSP 109
+ + +LY H G L+ LRS+LVNN A + G KY + +P
Sbjct: 1025 ICSEYLYRHFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGMPKYAVYANP 1073
Score = 38.3 bits (85), Expect = 0.077
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
+RLEFLGDA++++L + HL+ G L R+A+V N A LA +
Sbjct: 833 ERLEFLGDAVVEFLSSIHLFFMFPELEEGGLATYRAAIVQNQHLALLAKK 882
Score = 35.9 bits (79), Expect = 0.41
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 15 LERVLQYRFRDRSLLLQAMTHAS----------HHRNVLTDCYQRLEFLGDAILDYLITR 64
LE + YRF++R LL A+TH S H RN LT+C R GD + Y+ TR
Sbjct: 746 LEESIGYRFKNRYLLQLALTHPSYKENYGTNPDHARNSLTNCGIRQPEYGDRKIHYMNTR 805
>UniRef50_P51837 Cluster: Ribonuclease 3; n=5;
Gammaproteobacteria|Rep: Ribonuclease 3 - Coxiella
burnetii
Length = 233
Score = 52.8 bits (121), Expect = 3e-06
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 10 HGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYED 69
H + +ER L ++F + LL A+TH S D +RLEFLGD++L ++I LY+
Sbjct: 3 HLNKLMER-LGHQFNNLELLKIALTHCSSG----ADNNERLEFLGDSVLGFIIASELYQR 57
Query: 70 KRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
+ G L+ +R+++VN A ++ + G ++Y +
Sbjct: 58 RPQAREGDLSRMRASMVNGDELAQMSTKLGINEYLQ 93
>UniRef50_Q6SFI8 Cluster: Ribonuclease III; n=2; Bacteria|Rep:
Ribonuclease III - uncultured bacterium 580
Length = 231
Score = 52.4 bits (120), Expect = 4e-06
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE+ ++Y+F+D LL AMTH SH + + + +RLEFLGD+IL++++ L++
Sbjct: 9 LEKSIKYKFKDDKLLALAMTHRSH--SGMNN--ERLEFLGDSILNFVVADLLFKKFNDLD 64
Query: 75 PGALTDLRSALV 86
G L+ LRS LV
Sbjct: 65 EGDLSRLRSQLV 76
>UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|Rep:
Ribonuclease 3 - Zymomonas mobilis
Length = 223
Score = 52.4 bits (120), Expect = 4e-06
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
+E+ L +R +D +L L+AMTH SH + YQRLEFLGD +L +I LY+
Sbjct: 10 IEKNLGHRPKDPALFLRAMTHPSHGNSD----YQRLEFLGDRVLGLVIANWLYDLFPREP 65
Query: 75 PGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G L+ ++LV+ A++A G ++ R
Sbjct: 66 EGKLSRRLNSLVSGASCASIARIVGLPQWLR 96
>UniRef50_Q9PB98 Cluster: Ribonuclease 3; n=14;
Gammaproteobacteria|Rep: Ribonuclease 3 - Xylella
fastidiosa
Length = 227
Score = 52.4 bits (120), Expect = 4e-06
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 21 YRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTD 80
Y F D SLLLQA+ H S T +RLEFLGD++++ LI L++ GALT
Sbjct: 15 YVFTDPSLLLQALRHCSAG----TPHNERLEFLGDSVVNLLIAEALFQRWPRADEGALTR 70
Query: 81 LRSALVNNTIFATLA 95
RS LV T A++A
Sbjct: 71 ARSELVRETSLASIA 85
>UniRef50_Q5P9U8 Cluster: Ribonuclease 3; n=2; Anaplasma|Rep:
Ribonuclease 3 - Anaplasma marginale (strain St.
Maries)
Length = 232
Score = 52.4 bits (120), Expect = 4e-06
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 21 YRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTD 80
Y+FRD LLL+A+TH + Y+RLEFLGDA+L ++ LY G LT
Sbjct: 19 YQFRDLDLLLEALTHPRLSYKSAAN-YERLEFLGDAVLSMTVSEMLYRLFPDDDEGCLTR 77
Query: 81 LRSALVNNTIFATLAARHG 99
R+ALV + +A G
Sbjct: 78 KRTALVRGSEVVEIARSIG 96
>UniRef50_A4RHU9 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)]; n=3; Magnaporthe grisea|Rep:
Dicer-like protein 2 [Includes: Endoribonuclease DCL2 (EC
3.1.26.-); ATP-dependent helicase DCL2 (EC 3.6.1.-)] -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1485
Score = 52.4 bits (120), Expect = 4e-06
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHH-RNVLTDCYQRLEFLGDAILDYLITRHLY--EDKR 71
LE +L Y F +SLL++A+THAS++ +RLEFLGD++LD+++ L+ +D
Sbjct: 1171 LEELLGYSFNKKSLLIEAITHASYNIPGSAGSSLERLEFLGDSVLDFVVVARLFSVKDPA 1230
Query: 72 CHSPGALTDLRSALVNNTIFATLA 95
+ LR+A+VN LA
Sbjct: 1231 PIEHYNMHLLRTAVVNGEFLGFLA 1254
Score = 35.5 bits (78), Expect = 0.54
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 23 FRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSP-GALTDL 81
F+D L++ +T +S R LT+ Y+R+EFLGDA+L L H P G L+ L
Sbjct: 1002 FKDIDLVMMVITSSSAGR--LTN-YERVEFLGDAVLK-LGAAVTCATNNLHFPEGYLSLL 1057
Query: 82 RSALVNNTIFATLAARHGFHKY 103
+ LV+N+ A G ++
Sbjct: 1058 KDRLVSNSRLCKAATALGLDQF 1079
>UniRef50_Q556G5 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 1203
Score = 52.0 bits (119), Expect = 6e-06
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 5 VERELHGYEQLERVLQYR----FRDRSLLLQAMTH--ASHHRNVLTDCYQRLEFLGDAIL 58
+E L Y+ +++ QY F D++ L + H ++ + N T+ +RLEFLGDA+L
Sbjct: 1053 IEDNLINYKYYDQINQYLNSTDFNDQTNELVSNDHFYSNQNNNNNTNFSERLEFLGDAVL 1112
Query: 59 DYLITRHLYEDKRCHSPGALTDLRSALVNN 88
D+++ +L+ + G LT+ +S LVNN
Sbjct: 1113 DFIVADYLFSKYKEQQEGYLTESKSKLVNN 1142
Score = 36.7 bits (81), Expect = 0.24
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
YQRLEFLGD++L + +L++ G L+ R N L+ R GF R
Sbjct: 925 YQRLEFLGDSVLKITSSLYLFKKFDNEGEGLLSKKREFYTKNEYLTELSRRIGFDYILR 983
>UniRef50_Q6LX27 Cluster: Ribonuclease III family:Double-stranded
RNA binding (DsRBD) domain; n=4; Methanococcus|Rep:
Ribonuclease III family:Double-stranded RNA binding
(DsRBD) domain - Methanococcus maripaludis
Length = 230
Score = 52.0 bits (119), Expect = 6e-06
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRH 65
+ +E+L L +F D ++ +A H+S+ +N + +RLE+LGDA+LD +I+ +
Sbjct: 2 MKNFEKLLSKLDIQFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLIISEY 61
Query: 66 LYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
L++ K S G ++ LR+ V + T A + F+ Y
Sbjct: 62 LFK-KENLSEGEMSKLRAKYVCESALFTYAKKLKFNNY 98
>UniRef50_Q98514 Cluster: Putative protein A464R; n=6;
Chlorovirus|Rep: Putative protein A464R - Paramecium
bursaria Chlorella virus 1 (PBCV-1)
Length = 275
Score = 52.0 bits (119), Expect = 6e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRH 106
Y+R+EF+GD++L ++I R+LY++ G L+ LR+ V+ +++A R G H Y
Sbjct: 84 YERMEFVGDSVLGFIIARYLYDNFPGKDEGFLSRLRTKFVSGKFLSSIALRMGLHNYVIM 143
Query: 107 MSPGL 111
GL
Sbjct: 144 HQKGL 148
>UniRef50_UPI00015B6129 Cluster: PREDICTED: similar to ribonuclease
iii; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
ribonuclease iii - Nasonia vitripennis
Length = 1381
Score = 51.6 bits (118), Expect = 8e-06
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHAS-HHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+ E + F LL +A T S + N+ QRLEFLGD +L +++ +LY+
Sbjct: 1022 KFEEGIGVEFSHIRLLARAFTDRSIGYTNLTLGSNQRLEFLGDTVLQLIVSEYLYKFFPE 1081
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSP 109
H G L+ LRS+LVNN A + G +Y + +P
Sbjct: 1082 HHEGHLSLLRSSLVNNKTQAVVCDDLGMTQYALYGNP 1118
Score = 42.7 bits (96), Expect = 0.004
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
+RLEFLGDA++++L + HL+ G L R+A+V N A LA + +Y
Sbjct: 878 ERLEFLGDAVVEFLTSIHLFHMFPDLEEGGLATYRAAIVQNQHLAVLAKKLNLEQY 933
Score = 38.3 bits (85), Expect = 0.077
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHAS----------HHRNVLTDCYQRLEFLGDAILDYLI 62
+ LE+ L Y+F++R LL A+TH S H RN LT+C R GD + Y+
Sbjct: 789 DMLEQTLDYKFKNRYLLQLALTHPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYMN 848
Query: 63 TR 64
TR
Sbjct: 849 TR 850
>UniRef50_Q0LPI7 Cluster: Ribonuclease III; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Ribonuclease III -
Herpetosiphon aurantiacus ATCC 23779
Length = 234
Score = 51.2 bits (117), Expect = 1e-05
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYEDK 70
+L+ L Y F D + L AM H S+ H ++ +RLEFLGDA+L+++ L+ +
Sbjct: 5 KLQAELGYTFNDLNFLRAAMLHRSYVHEHPEAGSESNERLEFLGDALLNFICGSFLFHEF 64
Query: 71 RCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
G LT R+ LV A LA R Y
Sbjct: 65 PELGEGDLTKTRAMLVQTRTLAGLARRFNLGSY 97
>UniRef50_A3VSG4 Cluster: Ribonuclease III; n=1; Parvularcula
bermudensis HTCC2503|Rep: Ribonuclease III -
Parvularcula bermudensis HTCC2503
Length = 238
Score = 51.2 bits (117), Expect = 1e-05
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
+E + +RF DRSLL +A+THAS ++ L D +RLEFLGD +L L L+ +
Sbjct: 17 VEAAVGHRFDDRSLLARALTHASVSQDGLKD-LERLEFLGDRVLGLLAADLLWRRFPDMA 75
Query: 75 PGALTDLRSALVNNTIFATLAARH 98
G L +ALV A AARH
Sbjct: 76 EGELAPRLNALVRRETCAD-AARH 98
>UniRef50_A0WD16 Cluster: Ribonuclease III; n=1; Geobacter lovleyi
SZ|Rep: Ribonuclease III - Geobacter lovleyi SZ
Length = 228
Score = 51.2 bits (117), Expect = 1e-05
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 18 VLQYRFRDRSLLLQAMTHASHHRNVLTDC---YQRLEFLGDAILDYLITRHLYEDKRCHS 74
+L + F ++ LL QA+TH S+ + YQRLEFLGDA+L +L+ L +
Sbjct: 8 ILGHSFINQRLLQQALTHPSYLNEARQEGAADYQRLEFLGDAVLGFLLADLLCQHFPALP 67
Query: 75 PGALTDLRSALVNNTIFATLAARHG 99
G L+ LRS+LV+ A LA G
Sbjct: 68 EGDLSRLRSSLVDQPRLARLAVDAG 92
>UniRef50_Q97QG6 Cluster: Ribonuclease 3; n=46; Lactobacillales|Rep:
Ribonuclease 3 - Streptococcus pneumoniae
Length = 232
Score = 51.2 bits (117), Expect = 1e-05
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 23 FRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALT 79
F D+ LL A TH S+ HR + +RLEFLGDA+L LI+ +LY+ G L+
Sbjct: 16 FADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLS 75
Query: 80 DLRSALVNNTIFATLAARHGFHKYFR 105
LR+ +V A A F ++ +
Sbjct: 76 KLRAMIVREESLAGFARDCQFDQFIK 101
>UniRef50_Q8EW40 Cluster: Ribonuclease III; n=1; Mycoplasma
penetrans|Rep: Ribonuclease III - Mycoplasma penetrans
Length = 244
Score = 50.8 bits (116), Expect = 1e-05
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 28 LLLQAMTHASHHRNVLTD-CYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
L ++A+TH S++ YQRLEFLGDA++ LI+ L+++K +T++R LV
Sbjct: 31 LYVEALTHNSYNNEKKVGYTYQRLEFLGDAVISKLISEFLFKNKSLDEQ-KMTEIRKNLV 89
Query: 87 NNTIFATLAARHGFHKYFRHMSPGLN 112
N+ IF + G Y + G+N
Sbjct: 90 NSEIFKKASEELGLLDY-AFIGKGIN 114
>UniRef50_A0YTE9 Cluster: Ribonuclease III; n=1; Lyngbya sp. PCC
8106|Rep: Ribonuclease III - Lyngbya sp. PCC 8106
Length = 395
Score = 50.8 bits (116), Expect = 1e-05
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 13 EQLERVLQ-YRFRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
E+L+ +L+ F+D LL +A+TH ++ H ++LEFLGD++L++L +LYE
Sbjct: 164 ERLKELLETIPFQDARLLQRALTHRTYVFEHPTKTEGDNEQLEFLGDSVLNFLAGDYLYE 223
Query: 69 D-KRCHSPGALTDLRSALVNNTIFATLAAR 97
G LT RS+ V+N+ FA A +
Sbjct: 224 QYSHRRDEGELTRRRSSFVDNSQFAQFAVK 253
>UniRef50_A5UJK3 Cluster: Ribonuclease III (DsRNA-specific), Rnc;
n=1; Methanobrevibacter smithii ATCC 35061|Rep:
Ribonuclease III (DsRNA-specific), Rnc -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 223
Score = 50.8 bits (116), Expect = 1e-05
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 24 RDRSLLLQAMTHASHH-RNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLR 82
+DR L A TH S+ ++ L Y+RLEFLGD++L+ +++ +LY+ + G LT LR
Sbjct: 12 KDRHLYDVAFTHGSYGTKHGLDYTYERLEFLGDSVLNMIVSEYLYKQYPDYEEGKLTKLR 71
Query: 83 SALVNNTIFATLAARHGFHKYFR 105
+ V T + G K+ +
Sbjct: 72 ANYVCQTALIYYSHELGLDKHIK 94
>UniRef50_O51648 Cluster: Ribonuclease 3; n=3; Borrelia burgdorferi
group|Rep: Ribonuclease 3 - Borrelia burgdorferi (Lyme
disease spirochete)
Length = 246
Score = 50.8 bits (116), Expect = 1e-05
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 2 CECVERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNV--LTDCYQRLEFLGDAILD 59
C C ER+ + LE L F + LL A+ H+S+ + + +RLEFLGD++L+
Sbjct: 10 CLCNERKSQLSKFLEN-LSIDFSNFDLLNTALCHSSYSNELDQKSSNNERLEFLGDSVLN 68
Query: 60 YLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
+IT HLY+ S G L+ RS +V+ + +A Y
Sbjct: 69 LIITDHLYKTYPNKSEGELSKARSYIVSEDSLSNIAREINLGSY 112
>UniRef50_A1U2V5 Cluster: Ribonuclease III; n=5; Bacteria|Rep:
Ribonuclease III - Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 229
Score = 50.4 bits (115), Expect = 2e-05
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+QL+R + Y+F++ LL A+TH R+ +RLEFLGD+I++ +I +LY
Sbjct: 8 DQLQRRIGYQFKEPERLLLALTH----RSFGNQNNERLEFLGDSIVNMVIAEYLYLHFEK 63
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G L+ LR+ +V A + +Y R
Sbjct: 64 AREGQLSRLRARMVKGVTLAEIGREFQLGQYLR 96
>UniRef50_Q53844 Cluster: Ribonuclease 3; n=2; Spiroplasma
citri|Rep: Ribonuclease 3 - Spiroplasma citri
Length = 248
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 24 RDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLR 82
++R L+A+TH S+ + + L+ YQR+EFLGDAIL I+ +L+ + G +T+LR
Sbjct: 27 KERQYYLEALTHNSYANEHNLSYTYQRMEFLGDAILAKEISLYLFLSFPDKNEGEITNLR 86
Query: 83 SALVNNTIFATLAAR 97
S +V A L R
Sbjct: 87 SKIVREGTLAELVRR 101
>UniRef50_O01326 Cluster: Ribonuclease 3; n=2; Caenorhabditis|Rep:
Ribonuclease 3 - Caenorhabditis elegans
Length = 1086
Score = 50.4 bits (115), Expect = 2e-05
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLY 67
L + LE L +F + LL +A T + N LT + QRLE+LGD++L +++ LY
Sbjct: 830 LSTFHALEERLGIQFNNIRLLAKAFTRRNIPNNDLTKGHNQRLEWLGDSVLQLIVSDFLY 889
Query: 68 EDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
H G ++ LR++LV+N A + GF ++
Sbjct: 890 RRFPYHHEGHMSLLRTSLVSNQTQAVVCDDLGFTEF 925
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLA 95
+RLE+LGDA+++ +++ HLY H G L R+ALV N ATLA
Sbjct: 691 ERLEYLGDAVVELIVSHHLYFMLTHHFEGGLATYRTALVQNRNLATLA 738
>UniRef50_Q67B98 Cluster: Ribonuclease III-like protein; n=2;
Murinae|Rep: Ribonuclease III-like protein - Rattus
norvegicus (Rat)
Length = 288
Score = 50.0 bits (114), Expect = 2e-05
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRC 72
+ E + F LL +A T + N LT + QR+EFLGD+I+ + T +L+
Sbjct: 23 EFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPD 82
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKY 103
H G LT LRS+LVNN A +A G +Y
Sbjct: 83 HHEGHLTLLRSSLVNNRTQAKVAEELGMQEY 113
>UniRef50_A4E6T0 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 241
Score = 50.0 bits (114), Expect = 2e-05
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 16 ERVLQYRFRDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
+ +L + F ++ LL A+TH S ++ Y+RLEFLGD+IL ++ R L+E
Sbjct: 11 QEILGHEFNNKVLLRAALTHPSAVEGQPVSASYERLEFLGDSILGAVVARSLFESYPEFD 70
Query: 75 PGALTDLRSALVNNTIFATLAARHG 99
G LT L+ +LV+ + ++ G
Sbjct: 71 EGKLTRLKVSLVSGATLSEVSHELG 95
>UniRef50_A2WR94 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 256
Score = 50.0 bits (114), Expect = 2e-05
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 14 QLERVLQ-YRFRDRSLLL--QAMTHASHHRNVLTDC--YQRLEFLGDAILDYLITRHLYE 68
++ER L Y FRD LL A+TH+ H R+ +QRLEFLGDA L Y
Sbjct: 23 EVERALGGYSFRDGGALLLEDALTHSVHPRDEAGGRARHQRLEFLGDAALGLAFATIFYR 82
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
D G LT LRSA V+ A +A R + R
Sbjct: 83 DDPGLDQGDLTVLRSANVSTQKLARVAVRRRLYPLLR 119
>UniRef50_Q9NRR4 Cluster: Ribonuclease 3; n=59; Eumetazoa|Rep:
Ribonuclease 3 - Homo sapiens (Human)
Length = 1374
Score = 50.0 bits (114), Expect = 2e-05
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRC 72
+ E + F LL +A T + N LT + QR+EFLGD+I+ + T +L+
Sbjct: 1109 EFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPD 1168
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKY 103
H G LT LRS+LVNN A +A G +Y
Sbjct: 1169 HHEGHLTLLRSSLVNNRTQAKVAEELGMQEY 1199
Score = 41.5 bits (93), Expect = 0.008
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
+RLEFLGDA++++L + HLY G L R+A+V N A LA +
Sbjct: 966 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKK 1015
Score = 36.7 bits (81), Expect = 0.24
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRN 41
L++++ Y F+DR LL AMTH SHH N
Sbjct: 879 LDKLIGYTFQDRCLLQLAMTHPSHHLN 905
>UniRef50_Q7VRR0 Cluster: Ribonuclease 3; n=4;
Gammaproteobacteria|Rep: Ribonuclease 3 - Blochmannia
floridanus
Length = 232
Score = 50.0 bits (114), Expect = 2e-05
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
L++ L Y F LLL+A+TH R+ +RLEFLGD+IL+Y IT LY
Sbjct: 12 LQKKLGYFFHTVDLLLRALTH----RSFSNKHNERLEFLGDSILNYSITNILYHRYNHMD 67
Query: 75 PGALTDLRSALVNNTIFATLA 95
G ++ +RS+LV + LA
Sbjct: 68 EGDMSRIRSSLVCSRTLVELA 88
>UniRef50_A0NMB9 Cluster: Ribonuclease III; n=1; Stappia aggregata
IAM 12614|Rep: Ribonuclease III - Stappia aggregata IAM
12614
Length = 236
Score = 49.6 bits (113), Expect = 3e-05
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 5 VERELHG---YEQLERVLQYRFRDRSLLLQAMTHAS--HHRNVLTDCYQRLEFLGDAILD 59
++R+LH L+ LQY FRD LL A+THAS + YQRLEFLGD +L
Sbjct: 1 MKRQLHQPGPISALKNALQYEFRDLELLRVALTHASALPPSETVAGSYQRLEFLGDRVLG 60
Query: 60 YLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHG 99
+I L++ G L + +V A +A G
Sbjct: 61 LVIASMLHKHFPRADEGELARRFNHMVKRETCAEIAQELG 100
>UniRef50_Q5GTI3 Cluster: Ribonuclease 3; n=26; Rickettsiales|Rep:
Ribonuclease 3 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 243
Score = 49.6 bits (113), Expect = 3e-05
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHAS-HHRNVLTDC--YQRLEFLGDAILDYLITRHLYED 69
+ + +++ YRF++ ++L +A+TH S + RN Y+RLEFLGD+IL+ +++ L+
Sbjct: 16 DTISKIINYRFKNDAILEEALTHPSLNKRNSKNQIENYERLEFLGDSILNMIVSAILFRL 75
Query: 70 KRCHSPGALTDLRSALVNNTIFATLA 95
GAL ++ LV A +A
Sbjct: 76 FPKEKEGALARRKTDLVCGNTIANVA 101
>UniRef50_Q4FUV6 Cluster: Ribonuclease 3; n=6;
Gammaproteobacteria|Rep: Ribonuclease 3 - Psychrobacter
arcticum
Length = 265
Score = 49.6 bits (113), Expect = 3e-05
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
L R L Y F D SL A+TH S Y+RLEFLGDA+L ++ LY +
Sbjct: 37 LTRKLGYVFNDLSLAKLALTHRSFDSK---KNYERLEFLGDALLGMIVGEALYHRYPTQN 93
Query: 75 PGALTDLRSALVNNTIFATLA 95
G LT +R+ LV +A
Sbjct: 94 EGRLTRMRATLVRQESLVIIA 114
>UniRef50_A5E7T6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 729
Score = 49.2 bits (112), Expect = 4e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
+RLEF GD+IL+ LIT +Y ++ G L+ +R+A++NN + +A +GF K R
Sbjct: 389 ERLEFYGDSILNNLITIIIYNKFPNNTEGELSKIRAAMINNRVLKEIAVDYGFDKKLR 446
>UniRef50_Q8Z023 Cluster: Ribonuclease 3; n=6; Cyanobacteria|Rep:
Ribonuclease 3 - Anabaena sp. (strain PCC 7120)
Length = 228
Score = 49.2 bits (112), Expect = 4e-05
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 23 FRDRSLLLQAMTHASH-HRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRCHSPGALTD 80
FRD LL +A+TH S+ + N + +RLEFLGDAIL++L +LY LT
Sbjct: 7 FRDDKLLRRALTHRSYVNENPEEGEHNERLEFLGDAILNFLSGEYLYRSHPDRGEDELTR 66
Query: 81 LRSALVNNTIFATLAARHG 99
RSALV+ A A G
Sbjct: 67 RRSALVDEKQLAKFAIEVG 85
>UniRef50_Q6BX76 Cluster: Similar to CA1420|CaRNT1 Candida albicans
CaRNT1 Ribonuclease III; n=1; Debaryomyces hansenii|Rep:
Similar to CA1420|CaRNT1 Candida albicans CaRNT1
Ribonuclease III - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 540
Score = 48.8 bits (111), Expect = 5e-05
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 38 HHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
H ++ +RLEFLGD++L+ L+T ++ S G L+ +RS LVNN A +
Sbjct: 210 HKSELMASHNERLEFLGDSVLNNLVTVIIFNKFPEASEGELSKIRSLLVNNVTLAEFSIL 269
Query: 98 HGFHKYFR 105
+GF K R
Sbjct: 270 YGFDKKLR 277
>UniRef50_Q3ZXY9 Cluster: Ribonuclease 3; n=3; Dehalococcoides|Rep:
Ribonuclease 3 - Dehalococcoides sp. (strain CBDB1)
Length = 237
Score = 48.8 bits (111), Expect = 5e-05
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHAS---HHRNVLTDCYQRLEFLGDAILDYLITRHLYEDK 70
+LE L +F SLL QA+ H S + N + +R+EFLGDA+L + LY D
Sbjct: 6 ELENSLGVKFEQPSLLEQALIHTSWVNENPNHSSGSNERMEFLGDAVLGVIFADRLYHDF 65
Query: 71 RCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
G LT RS LV +A KY
Sbjct: 66 PDIQEGDLTRFRSLLVRRESLVRVALGINLGKY 98
>UniRef50_Q3VWC5 Cluster: Ribonuclease III; n=1; Prosthecochloris
aestuarii DSM 271|Rep: Ribonuclease III -
Prosthecochloris aestuarii DSM 271
Length = 277
Score = 48.4 bits (110), Expect = 7e-05
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 45 DCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLA 95
D QRLEFLGDA+LD +I+ HLY+ GAL+ RS +VN A A
Sbjct: 81 DSNQRLEFLGDAVLDLIISEHLYKLFPESDEGALSSTRSKIVNRKSLADFA 131
>UniRef50_Q190G5 Cluster: Ribonuclease III; n=3; Peptococcaceae|Rep:
Ribonuclease III - Desulfitobacterium hafniense (strain
DCB-2)
Length = 262
Score = 48.4 bits (110), Expect = 7e-05
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 28 LLLQAMTHASH-HRNVLT--DCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
L A+TH S+ N + + QRLEFLGDAILD+++ +LY G LT +R+A
Sbjct: 51 LFTTALTHPSYLFENPQSGLENNQRLEFLGDAILDFVVAEYLYLSYPERPEGELTKMRAA 110
Query: 85 LVNNTIFATLAAR 97
+VN + A A +
Sbjct: 111 VVNESTLARTAKK 123
>UniRef50_A4GK15 Cluster: Ribonuclease III; n=1; uncultured marine
bacterium HF130_81H07|Rep: Ribonuclease III -
uncultured marine bacterium HF130_81H07
Length = 220
Score = 48.4 bits (110), Expect = 7e-05
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
+++LE+ L Y F+ + L++A+TH S + + + EFLGD++L+ +I++ L E
Sbjct: 5 FKKLEKNLGYSFQKKETLVKALTHVSKSK----ENNEVFEFLGDSVLNLIISQILVEKFS 60
Query: 72 CHSPGALTDLRSALVNNTIFATLAAR 97
G L+ +RS LV+ T +A +
Sbjct: 61 MDDEGTLSLMRSKLVSRTTLNKIAKK 86
>UniRef50_A3EQH6 Cluster: DsRNA-specific ribonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: DsRNA-specific
ribonuclease - Leptospirillum sp. Group II UBA
Length = 377
Score = 48.4 bits (110), Expect = 7e-05
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTH--ASHHRNVLTDC--YQRLEFLGDAILDYLITRHLYE 68
E L R+L F+ + +A+TH ASH R T Y+RLEFLGD ++ +++ +L
Sbjct: 19 EHLIRILGLPFKPTMRIEEALTHRSASHERGRKTPIPNYERLEFLGDRVIGLIVSEYLLN 78
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
S G + + S +V+ A++A R Y
Sbjct: 79 TWPSASEGDIGQIFSGIVSTQTLASIARRMDLGSY 113
>UniRef50_Q6N6C1 Cluster: Ribonuclease 3; n=14; Rhizobiales|Rep:
Ribonuclease 3 - Rhodopseudomonas palustris
Length = 272
Score = 48.4 bits (110), Expect = 7e-05
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVL-TDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
+E+ L + F D SLL A TH S ++ TD YQRLEFLGD +L +++ LY
Sbjct: 47 IEQRLGHSFADPSLLTTAFTHVSALKSARRTDSYQRLEFLGDHVLGLIVSDMLYRAFPDA 106
Query: 74 SPGALTDLRSALVNNTIFATLA 95
G L+ + LV A +A
Sbjct: 107 DEGELSKRLADLVRKETCADVA 128
>UniRef50_Q3A4Q8 Cluster: Ribonuclease 3; n=1; Pelobacter
carbinolicus DSM 2380|Rep: Ribonuclease 3 - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 232
Score = 48.4 bits (110), Expect = 7e-05
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHAS--HHRNVLTDC-YQRLEFLGDAILDYLITRHLYEDKR 71
LE + Y F +++LLL+A+TH S + +N T+ +RLEFLGDA+L +++ +++
Sbjct: 10 LEDTIDYVFDNQALLLEALTHKSFSNEQNDRTEPDNERLEFLGDAVLGVVVSHYIFRTFP 69
Query: 72 CHSPGALTDLRSALVN 87
G LT +RS +V+
Sbjct: 70 HLPEGELTRIRSEVVS 85
>UniRef50_Q4A589 Cluster: Ribonuclease 3; n=1; Mycoplasma synoviae
53|Rep: Ribonuclease 3 - Mycoplasma synoviae (strain
53)
Length = 231
Score = 48.4 bits (110), Expect = 7e-05
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 13 EQLERVLQ---YRFRDRSLLLQAMTHASHHR-NVLTDCYQRLEFLGDAILDYLITRHLYE 68
E+L+ LQ +++ L ++A TH ++ + N + Y+RLEFLGD+++ +LI+ +
Sbjct: 10 EELKAFLQKNNIEYKNIDLFIEATTHKTYSKVNKNSKDYERLEFLGDSLVGFLISDYCVR 69
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAAR 97
+ PG L+ LRS LV+ +A +
Sbjct: 70 EFSSLEPGELSRLRSKLVDKLALFKIAQK 98
>UniRef50_Q6F1N5 Cluster: Ribonuclease 3; n=4; Mollicutes|Rep:
Ribonuclease 3 - Mesoplasma florum (Acholeplasma florum)
Length = 231
Score = 48.4 bits (110), Expect = 7e-05
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 22 RFRDRSLLLQAMTHASHHRNVLT-DCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTD 80
+ D + A+TH S+ T + YQRLEFLGDA+L +++ LY + G LT
Sbjct: 13 KINDSKIFSTALTHNSYANETKTKETYQRLEFLGDAVLQMYVSKFLYLNFTNAPEGKLTK 72
Query: 81 LRSALVNNTIFATLAARHGFHKYFR 105
RS +V + +A K R
Sbjct: 73 TRSDIVRQETLSEIAKMIDLGKIIR 97
>UniRef50_A2ST26 Cluster: Ribonuclease III; n=1; Methanocorpusculum
labreanum Z|Rep: Ribonuclease III - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 145
Score = 48.0 bits (109), Expect = 1e-04
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRN---VLTDCYQRLEFLGDAILDYLITRHLYE 68
Y L + Y F + LLL A+T ++ R +++ L LGDA+LD ++ R L E
Sbjct: 3 YSDLYAKIGYTFANVDLLLHALTRTAYARENELSMSETMDSLAVLGDAVLDLIVIRRLIE 62
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
+ G +T + LVN T+ LA G +Y R
Sbjct: 63 EGE-FDKGEITRKKIDLVNMTVVRKLAEDIGLPEYMR 98
>UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria
(class)|Rep: Ribonuclease 3 - Streptomyces avermitilis
Length = 276
Score = 48.0 bits (109), Expect = 1e-04
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
LE L Y+ + +LL++A+TH S+ + N +RLEFLGD++L ++T LY
Sbjct: 24 LEGRLGYKL-ESALLVRALTHRSYAYENGGLPTNERLEFLGDSVLGLVVTDTLYRTHPDL 82
Query: 74 SPGALTDLRSALVNNTIFA 92
G L LR+A+VN+ A
Sbjct: 83 PEGQLAKLRAAVVNSRALA 101
>UniRef50_Q2LVR4 Cluster: Ribonuclease III; n=1; Syntrophus
aciditrophicus SB|Rep: Ribonuclease III - Syntrophus
aciditrophicus (strain SB)
Length = 240
Score = 47.6 bits (108), Expect = 1e-04
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY---QRLEFLGDAILDYLITRHLYED 69
++LE L FRD +LL A+ H S+ + + +RLEFLGDA+L+ I+ L +
Sbjct: 10 KKLESHLSCAFRDITLLDNALVHRSYVNENPSLSFADNERLEFLGDAVLELCISDLLMKA 69
Query: 70 KRCHSPGALTDLRSALVNNTIFATLAAR 97
+S G L+ LR+++VN A LA +
Sbjct: 70 FPDYSEGQLSKLRASVVNEQPLAELAKK 97
>UniRef50_Q1IJU6 Cluster: Ribonuclease III; n=1; Acidobacteria
bacterium Ellin345|Rep: Ribonuclease III - Acidobacteria
bacterium (strain Ellin345)
Length = 258
Score = 47.6 bits (108), Expect = 1e-04
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASH--------HRNVLTDCYQRLEFLGDAILDYLITRHL 66
LE+ L ++F ++ LL++A+TH+S+ H N + + ++LEF+GD++L ++ ++ L
Sbjct: 10 LEKALDHKFEEQELLVRALTHSSYAREQRDHIHDNSVPNDNEQLEFIGDSVLAFVTSQEL 69
Query: 67 YEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
+ G L+ LR+ LV+ A K+ R
Sbjct: 70 VKKFPHFQEGELSKLRAYLVSARHLIQTARNLDLGKFLR 108
>UniRef50_A4A3U5 Cluster: Ribonuclease III; n=1; Congregibacter
litoralis KT71|Rep: Ribonuclease III - Congregibacter
litoralis KT71
Length = 224
Score = 47.6 bits (108), Expect = 1e-04
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LER R + +LL QA++H R+V + +RLEFLGD++L Y+++ LY
Sbjct: 7 LERQFGCRLNNDALLHQALSH----RSVGSRNNERLEFLGDSVLGYVVSEELYRRFPDAD 62
Query: 75 PGALTDLRSALVNNTIFATLA 95
G L+ LR +LV + A +A
Sbjct: 63 EGQLSRLRVSLVKGSALAEVA 83
>UniRef50_Q55FS1 Cluster: Putative RNase III; n=1; Dictyostelium
discoideum AX4|Rep: Putative RNase III - Dictyostelium
discoideum AX4
Length = 1389
Score = 47.6 bits (108), Expect = 1e-04
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
YQRLE++GDA+LD+ ++ LY G LTD RS LV N+ ++++ +
Sbjct: 1253 YQRLEYVGDAVLDFFVSDFLYATFPLAQEGQLTDYRSRLVRNSNLSSISRK 1303
Score = 34.7 bits (76), Expect = 0.95
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
QRLEFLGD++L + T +L+ S G L+ RS N ++ R G + R
Sbjct: 1099 QRLEFLGDSVLKLVSTIYLFFKYPKMSEGFLSQTRSDFTKNDHLLDVSKRLGLEEILR 1156
>UniRef50_Q6FQ28 Cluster: Candida glabrata strain CBS138 chromosome
I complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome I complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 734
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 43 LTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHK 102
+ + Y+RLEFLGD++++ ++T +Y+ + G +T LR LV+N A +G K
Sbjct: 452 IKNSYERLEFLGDSVINSIMTTIIYKSFPNYDAGQMTRLRVLLVSNRRLEKWAYLYGLQK 511
Query: 103 YFRHMSPGLNEVLKKYVKI 121
+ LNE+L K+
Sbjct: 512 HLLIRKSILNEMLNSGSKV 530
>UniRef50_A3LS79 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 566
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHM 107
+RLEFLGD++L+ L+T +Y+ S G LT +RS L++N + +GF K +
Sbjct: 241 ERLEFLGDSVLNNLVTLIIYDKFPSASEGKLTKMRSQLIDNHTLTQFSFEYGFDKRLKTK 300
Query: 108 SPGLNEVLK 116
+ E+LK
Sbjct: 301 TD--EEILK 307
>UniRef50_Q8KAN7 Cluster: Ribonuclease 3; n=9; Chlorobiaceae|Rep:
Ribonuclease 3 - Chlorobium tepidum
Length = 272
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 27 SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
+L +++ H H + QRLEFLGDA+LD LI+ HL++ G L+ R+ +V
Sbjct: 51 ALTHRSVLHDHHSEEHKPESNQRLEFLGDAVLDLLISEHLFKQFPGSDEGHLSSNRAKIV 110
Query: 87 NNTIFATLA 95
N A A
Sbjct: 111 NRKSLAAFA 119
>UniRef50_Q1NXA7 Cluster: Ribonuclease III; n=2; delta
proteobacterium MLMS-1|Rep: Ribonuclease III - delta
proteobacterium MLMS-1
Length = 233
Score = 47.2 bits (107), Expect = 2e-04
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 21 YRFRDRSLLLQAMTHASHHRNVL--TDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGAL 78
YRF+ SLL A+ H+S +RLEFLGDA+L + LYE G L
Sbjct: 17 YRFKRTSLLELALVHSSRAAEAGKGVSSNERLEFLGDAVLGLAVAALLYEAHPTMPEGDL 76
Query: 79 TDLRSALVNNTIFATLAARHGFHKYFR 105
+ R+ALVN A +A + ++ R
Sbjct: 77 SRHRAALVNEEHLAGMARQLALGEFIR 103
>UniRef50_Q648X5 Cluster: Ribonuclease III; n=3; environmental
samples|Rep: Ribonuclease III - uncultured archaeon
GZfos36D8
Length = 262
Score = 47.2 bits (107), Expect = 2e-04
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+LE + ++F++ +LL +A+T S+ + + + YQ LEFLGD +L ++ L++ +
Sbjct: 18 ELEASIGHQFKNIALLEEAITTGSYSNEHPGSSNYQTLEFLGDRVLSLILAEELFKLSKS 77
Query: 73 HS--PGALTDLRSALVNNTIFATLAARHGFHKYFR 105
S G +T L++ L NN A G Y R
Sbjct: 78 ASLDEGKMTFLKAELENNLRLAEYGENIGLRNYIR 112
>UniRef50_Q1FET5 Cluster: Ribonuclease III; n=1; Clostridium
phytofermentans ISDg|Rep: Ribonuclease III -
Clostridium phytofermentans ISDg
Length = 235
Score = 46.8 bits (106), Expect = 2e-04
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASH-HRNVLTDCY--QRLEFLGDAILDYLITRHLYEDK 70
+ E+ + Y F + LL QA+TH+S + L+ +RLEFLGDA+L+ + L+E
Sbjct: 12 EFEQKIDYAFTEPGLLRQALTHSSFANEKRLSKLANNERLEFLGDAVLELTTSEWLFEKH 71
Query: 71 RCHSPGALTDLRSALVNNTIFATLA 95
G LT LR+++V A A
Sbjct: 72 PKMPEGDLTKLRASMVCEQTLALCA 96
>UniRef50_Q0AYW0 Cluster: Ribonuclease III; n=1; Syntrophomonas
wolfei subsp. wolfei str. Goettingen|Rep: Ribonuclease
III - Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 233
Score = 46.8 bits (106), Expect = 2e-04
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 QYRFRDRSLLLQAMTHASH--HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGA 77
Q + L+ A+TH S+ +N + + QRLEFLGDA+L+ ++ +LY + G
Sbjct: 16 QLPYSSNELITMALTHPSYAQEKNTVAN-NQRLEFLGDAVLNLVVAEYLYNHYGRKAEGE 74
Query: 78 LTDLRSALVNNTIFATLAARHGFHKY 103
LT +R+ +V A A +Y
Sbjct: 75 LTKIRAKVVCEDALAIFARNINLGQY 100
>UniRef50_Q3SE71 Cluster: Ribonuclease with two RNaseIII domains;
n=2; Paramecium tetraurelia|Rep: Ribonuclease with two
RNaseIII domains - Paramecium tetraurelia
Length = 632
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+ +E +L Y+ + +++ + ++ RN Y+ LE LGD++L Y++T ++
Sbjct: 333 DSVESILNYQVVEEAIVTSS---SNFKRN-----YENLELLGDSVLKYVVTVDIFRQYEL 384
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKY 103
G +T LRS L+ NT A L + G Y
Sbjct: 385 LDEGEMTSLRSRLIMNTFLAQLFEQLGLQHY 415
Score = 33.1 bits (72), Expect = 2.9
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKR---------CHSPGALTDLRSALVNNTIFATLAAR 97
Y RLEFLGDA ++ L+ +++ R +PG L+ + L+ N R
Sbjct: 521 YDRLEFLGDAAIELLVISYIFRAAREKQQRNPNWILNPGLLSTWKQQLLGNKFMGEQTIR 580
Query: 98 HGFHKYFRHMSPGLNEVLKKYVKIQE 123
G + P +NE+ K Y I E
Sbjct: 581 MG-------LKPHINEIPKLYGDIFE 599
>UniRef50_A4R7T3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 402
Score = 46.8 bits (106), Expect = 2e-04
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 24 RDRSLLLQAMTHASHHRNVLT--DCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDL 81
+D S+ A TH+S N L+ Y RLE+LGDA L+ T +Y+ S GA + L
Sbjct: 124 KDPSIEKAAFTHSSVIGNKLSGVQSYDRLEWLGDAYLELFATCFIYQTFPALSHGASSQL 183
Query: 82 RSALVNNTIFATLAARHGFHKYFR 105
R L+ N A +G K R
Sbjct: 184 REVLIRNDSLAQWTQAYGLEKRAR 207
>UniRef50_A6RQB2 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 425
Score = 46.4 bits (105), Expect = 3e-04
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 25 DRSLLLQAMTHASHHRNVLTDC-YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRS 83
D +L L + TH +TD Y+RLE++GDA + + T + + PG + LR
Sbjct: 148 DPTLELASFTHHGRTNGSVTDLSYERLEWVGDAYIYTISTLLISQTFPALLPGKCSQLRE 207
Query: 84 ALVNNTIFATLAARHGFHK 102
LV N A A ++GF K
Sbjct: 208 RLVKNVTLADFARKYGFEK 226
>UniRef50_A5DC21 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 525
Score = 46.4 bits (105), Expect = 3e-04
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHK 102
+RLEFLGD+IL+ ++T ++E S G L+ +R+ L+NN + +GF K
Sbjct: 204 ERLEFLGDSILNNVVTLIIFEQFPTASEGELSRIRALLINNAFLTEFSLAYGFDK 258
>UniRef50_Q6MEK1 Cluster: Ribonuclease 3; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Ribonuclease 3 -
Protochlamydia amoebophila (strain UWE25)
Length = 242
Score = 46.4 bits (105), Expect = 3e-04
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 5 VERELHGYEQLERVLQYRFRDRSLLLQAMTHAS--HHRNVLTDCYQRLEFLGDAILDYLI 62
+E + +E L Y F+D LL+ A H S + + +RLEFLGD++L LI
Sbjct: 11 IEHVIRQAPAIEAKLGYTFKDPQLLVLAFVHRSFINENREVNQHNERLEFLGDSVLGMLI 70
Query: 63 TRHLYEDKRCHSPGALTDLRSALV 86
+ +LY G L+ LRS LV
Sbjct: 71 SDYLYCKLPKTPEGQLSYLRSRLV 94
>UniRef50_Q6A7R5 Cluster: Ribonuclease III; n=2;
Actinomycetales|Rep: Ribonuclease III -
Propionibacterium acnes
Length = 366
Score = 46.0 bits (104), Expect = 4e-04
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 25 DRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRS 83
D LL A+TH S+ N +RLEFLGDAIL+ +T +LY G L LRS
Sbjct: 151 DPQLLDLALTHRSYAFENGGIPTNERLEFLGDAILEVGVTDYLYRAFPDKPEGQLAKLRS 210
Query: 84 ALVNNTIFATLAARHG 99
A+V+ LA + G
Sbjct: 211 AVVSTVSLGRLARQLG 226
>UniRef50_Q1YS28 Cluster: Ribonuclease III; n=1; gamma
proteobacterium HTCC2207|Rep: Ribonuclease III - gamma
proteobacterium HTCC2207
Length = 225
Score = 46.0 bits (104), Expect = 4e-04
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
+QL+ LQY+F D LL A++H S N +RLEFLGDA+L I+ L++
Sbjct: 6 KQLQDRLQYQFSDPQLLTLALSHRSCGSNN----NERLEFLGDAVLGMAISSFLFQRFPE 61
Query: 73 HSPGALTDLRSALVNNTIFATLAAR 97
G L+ +RS +V A +A +
Sbjct: 62 AREGDLSRIRSQVVRAESLAEIARK 86
>UniRef50_Q9PQT8 Cluster: Ribonuclease 3; n=1; Ureaplasma
parvum|Rep: Ribonuclease 3 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 236
Score = 46.0 bits (104), Expect = 4e-04
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 24 RDRSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLY-------EDKRCHSP 75
++ S+ L+A+TH S+ + + LT YQRLEFLGDA ++++I+ ++ E R
Sbjct: 18 KNLSIYLEALTHKSYANEHKLTKNYQRLEFLGDACVEWVISNFIFNYKIKDNEKMRSLDE 77
Query: 76 GALTDLRSALVNNTIFATLA 95
G +T RS +V + I + A
Sbjct: 78 GEMTRARSNMVRSEILSYAA 97
>UniRef50_A5IYM8 Cluster: Ribonuclease III; n=1; Mycoplasma
agalactiae|Rep: Ribonuclease III - Mycoplasma
agalactiae
Length = 226
Score = 45.6 bits (103), Expect = 5e-04
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 31 QAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
QA TH S N YQ LEFLGDAIL + ++ L+ + + G LT +RS LV
Sbjct: 23 QAFTHGSSVANSKGKNYQTLEFLGDAILQFYVSAILFNSFKDKNQGQLTLIRSKLV 78
>UniRef50_Q9KPB2 Cluster: Ribonuclease 3; n=22;
Gammaproteobacteria|Rep: Ribonuclease 3 - Vibrio
cholerae
Length = 225
Score = 45.6 bits (103), Expect = 5e-04
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
+L L Y F++ LL A+TH S + +RLEFLGD+IL ++I LY
Sbjct: 7 KLTSKLGYTFKETELLNLALTHRSANGKH----NERLEFLGDSILSFVIADELYRRFPKV 62
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPG 110
+ G ++ +R+ LV A L Y + + PG
Sbjct: 63 NEGDMSRMRATLVRGNTLAELGREFDLGDYLK-LGPG 98
>UniRef50_Q4A7X2 Cluster: Ribonuclease III; n=3; Mycoplasma
hyopneumoniae|Rep: Ribonuclease III - Mycoplasma
hyopneumoniae (strain 7448)
Length = 227
Score = 45.2 bits (102), Expect = 7e-04
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 26 RSLLLQAMTHASHHR-NVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
+ + +QA+TH S++ N Y+ LEFLGD++++Y +++ +Y D + G T +RS
Sbjct: 21 KQIYIQALTHKSYNFINPDKPHYEMLEFLGDSVINYAVSKVIY-DNFYKNEGNSTQIRSL 79
Query: 85 LVNNTIFATLAARHGFHKY 103
L + + A + G Y
Sbjct: 80 LTSTSSLANATKKVGLMNY 98
>UniRef50_A0ZZX0 Cluster: Ribonuclease III; n=2; Bifidobacterium
adolescentis|Rep: Ribonuclease III - Bifidobacterium
adolescentis (strain ATCC 15703 / DSM 20083)
Length = 262
Score = 45.2 bits (102), Expect = 7e-04
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 28 LLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
LL++A+TH S H + Y+RLEFLGDA+L+ + T LY+ + G L +R+ V
Sbjct: 18 LLVEALTHRSFSHEHEGAKNYERLEFLGDAVLELVSTETLYKVHPDMNEGQLAKMRAKAV 77
Query: 87 NNTIFATLA 95
+ + +A
Sbjct: 78 SEESLSKIA 86
>UniRef50_Q5UQT7 Cluster: Probable ribonuclease 3; n=1; Acanthamoeba
polyphaga mimivirus|Rep: Probable ribonuclease 3 -
Mimivirus
Length = 538
Score = 45.2 bits (102), Expect = 7e-04
Identities = 26/92 (28%), Positives = 41/92 (44%)
Query: 22 RFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDL 81
++ D + +AM H S Y+RLE+LGDAI +IT + Y + G LT L
Sbjct: 39 KYVDMHIFEEAMLHVSTIYEESDKTYERLEYLGDAIFHMIITEYFYHRYNEENEGFLTRL 98
Query: 82 RSALVNNTIFATLAARHGFHKYFRHMSPGLNE 113
R + L+ G + + + LN+
Sbjct: 99 RIRIERGDSMVELSKNLGLNNFVQIYGISLND 130
Score = 37.1 bits (82), Expect = 0.18
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
+RL+FLGDA++ ++I +L+ G LT LR L N+ LA + Y
Sbjct: 351 ERLQFLGDAVIHFIIGEYLFNKYADSGEGYLTRLRCKLENSESLFFLAKQSDISSY 406
>UniRef50_A2SDH3 Cluster: Ribonuclease III; n=1; Methylibium
petroleiphilum PM1|Rep: Ribonuclease III - Methylibium
petroleiphilum (strain PM1)
Length = 248
Score = 44.8 bits (101), Expect = 9e-04
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 12 YEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
++ L+ L +RF LL +A+TH S D +RLEFLGDA+L I+ L+E
Sbjct: 23 FDSLQVRLGHRFAQVGLLGRALTHKSFG----ADNNERLEFLGDAVLSAAISGLLFEHFG 78
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G LT +R+ LV + LA G R
Sbjct: 79 QSGEGDLTRVRAHLVREEMLHRLALDLGLPALLR 112
>UniRef50_Q31HP3 Cluster: Ribonuclease III; n=2;
Gammaproteobacteria|Rep: Ribonuclease III -
Thiomicrospira crunogena (strain XCL-2)
Length = 233
Score = 44.4 bits (100), Expect = 0.001
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
+L + L Y++++ L +A+TH R++ +RLEFLGD++++++I L+
Sbjct: 12 RLSKSLGYQYKNIEFLQRALTH----RSMGAKNNERLEFLGDSLVNFMIADALFHQFHKI 67
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPG 110
S G L+ +R+ LV A + + Y + PG
Sbjct: 68 SEGDLSRIRAFLVKGETLAKIGKEYQLSDYLM-LGPG 103
>UniRef50_Q0C3T9 Cluster: Ribonuclease III; n=1; Hyphomonas
neptunium ATCC 15444|Rep: Ribonuclease III - Hyphomonas
neptunium (strain ATCC 15444)
Length = 234
Score = 44.4 bits (100), Expect = 0.001
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYED 69
++ + ++ ++F+D ++L +A+TH S + + QRLEFLGD +L+ +I L E
Sbjct: 11 KEAQEIIGFKFKDAAILERALTHPSAIPPSGDTVKLSNQRLEFLGDRVLNLIIAERLIER 70
Query: 70 KRCHSPGALTDLRSALV 86
++ S G L + LV
Sbjct: 71 RQSDSEGDLAPRLNRLV 87
>UniRef50_A6EDW5 Cluster: Ribonuclease III; n=1; Pedobacter sp.
BAL39|Rep: Ribonuclease III - Pedobacter sp. BAL39
Length = 242
Score = 44.4 bits (100), Expect = 0.001
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 20 QYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALT 79
Q FR RS+ + + + S N +RLEFLGDAIL ++ L+++ G LT
Sbjct: 36 QMAFRHRSVA-KVLKNGSRSSN------ERLEFLGDAILGSVVAELLFKNYPYKEEGFLT 88
Query: 80 DLRSALVNNTIFATLAARHGF 100
++RS +VN LA + GF
Sbjct: 89 EMRSKIVNRANLNQLARKMGF 109
>UniRef50_A3EU88 Cluster: DsRNA-specific ribonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: DsRNA-specific
ribonuclease - Leptospirillum sp. Group II UBA
Length = 247
Score = 44.4 bits (100), Expect = 0.001
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASH----HRNVLTDCYQRLEFLGDAILDYLITRHLYED 69
+LE L+YRFR LL +A TH S R +T +RLEFLGD +L ++ +L
Sbjct: 9 ELEDRLRYRFRKIDLLEEATTHKSFMNEGRRLGVTRNNERLEFLGDTVLGLVVAEYLMVT 68
Query: 70 KRCHSPGALTDLRSALVNNTIFATLAARHG 99
+ G L+ + +V+ A+++ G
Sbjct: 69 YPKYPEGILSKFKGRVVSEPTLASVSRALG 98
>UniRef50_A1WMW1 Cluster: Ribonuclease III; n=1; Verminephrobacter
eiseniae EF01-2|Rep: Ribonuclease III -
Verminephrobacter eiseniae (strain EF01-2)
Length = 247
Score = 44.4 bits (100), Expect = 0.001
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
L+ LQ+ F D LL +A TH R+ + +RLEFLGD++L+ ++ LY+
Sbjct: 8 LQERLQHVFSDPGLLERATTH----RSFSAEHNERLEFLGDSVLNLAVSSLLYQRLSALP 63
Query: 75 PGALTDLRSALVNNTIFATLAAR 97
G L+ +R+ LV LA R
Sbjct: 64 EGELSRVRANLVRQESLYQLALR 86
>UniRef50_Q8G7H1 Cluster: Ribonuclease 3; n=2; Bifidobacterium
longum|Rep: Ribonuclease 3 - Bifidobacterium longum
Length = 242
Score = 44.4 bits (100), Expect = 0.001
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 28 LLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
LL+QA+TH S H + Y+RLEFLGDA+L+ + T L+ + G L +R+ V
Sbjct: 27 LLVQALTHRSFSHEHPGVANYERLEFLGDAVLELVSTETLFTIHPDMTEGQLAKMRAKAV 86
Query: 87 NNTIFATLA 95
+ + +A
Sbjct: 87 SEDALSAIA 95
>UniRef50_A7HCB5 Cluster: Ribonuclease III; n=3;
Cystobacterineae|Rep: Ribonuclease III -
Anaeromyxobacter sp. Fw109-5
Length = 377
Score = 44.0 bits (99), Expect = 0.002
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASH---HRNV--LTDCYQRLEFLGDAILDYLITRHLYED 69
LE L DRS L A+TH S+ HR+ L D +RLEFLGDA++D ++ L E
Sbjct: 20 LEARLGLCLGDRSTALAALTHKSYVNEHRDEPGLGD-NERLEFLGDAVIDLAVSHRLMER 78
Query: 70 KRCHSPGALTDLRSALVNNTIFATLA 95
G L+ +R+A+V+ + +A
Sbjct: 79 FPAAREGDLSKMRAAVVDEQGLSEMA 104
>UniRef50_Q4FLS9 Cluster: Ribonuclease 3; n=2; Candidatus
Pelagibacter ubique|Rep: Ribonuclease 3 - Pelagibacter
ubique
Length = 222
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
+LE+ L+ +F D+ + ++++TH S + +++EFLGD +L +I + L E
Sbjct: 7 KLEKKLKLKFSDQKIFIKSLTHKSFDS---INNNEKIEFLGDRVLGLIIAKKLLELYPDE 63
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSP 109
G L ++LVN +A + KY ++P
Sbjct: 64 KEGVLDKKFASLVNKKKCLEIAKKIELEKYILVLNP 99
>UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: Ribonuclease III -
Candidatus Desulfococcus oleovorans Hxd3
Length = 231
Score = 43.6 bits (98), Expect = 0.002
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKR 71
LE+ L YRF D LL +A+ H+S+ + + +RLEFLGDA L I L
Sbjct: 6 LEQHLVYRFTDTGLLAKALRHSSYVNEQADPAMEDNERLEFLGDAALSLCIGHLLMARFP 65
Query: 72 CHSPGALTDLRSALVN 87
S G L+ R+ LVN
Sbjct: 66 ELSEGDLSQTRAGLVN 81
>UniRef50_Q5A694 Cluster: Probable ribonuclease III; n=2; Candida
albicans|Rep: Probable ribonuclease III - Candida
albicans (Yeast)
Length = 611
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
+RLEF GD+IL+ L T ++++ + G L+ +RS LV+N +A ++GF K R
Sbjct: 275 ERLEFYGDSILNNLATLIIFKEFPDSTEGDLSKIRSKLVSNKTLIKIAFQYGFDKKLR 332
>UniRef50_Q6LMS2 Cluster: Ribonuclease 3; n=19;
Gammaproteobacteria|Rep: Ribonuclease 3 - Photobacterium
profundum (Photobacterium sp. (strain SS9))
Length = 224
Score = 43.6 bits (98), Expect = 0.002
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
+L+R L Y+F L+ ++TH S + +RLEFLGD+IL ++I LY
Sbjct: 7 RLQRRLGYQFNSSELMTLSLTHRSANGKH----NERLEFLGDSILSFVIADDLYHRFPHV 62
Query: 74 SPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPG 110
G ++ +R+ LV A L Y + PG
Sbjct: 63 DEGDMSRMRATLVRGKTLAELGREFELGDYLL-LGPG 98
>UniRef50_A5ZF82 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides caccae ATCC 43185
Length = 329
Score = 43.2 bits (97), Expect = 0.003
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 7 RELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDC-----YQRLEFLGDAILDYL 61
R+ Y R+L + R+ L QA+ H S +V +D +RLEFLGDAILD +
Sbjct: 28 RDRESYLCFYRILGFYPRNIQLYEQALLHKSS--SVRSDKGRPLNNERLEFLGDAILDAI 85
Query: 62 ITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRH 106
+ +Y+ G LT+ RS +V LA G K ++
Sbjct: 86 VGDIVYKRFEGKREGFLTNTRSKIVQRETLNKLAVEIGLDKLIKY 130
>UniRef50_A4GHU1 Cluster: Ribonuclease III; n=1; uncultured marine
bacterium EB0_39H12|Rep: Ribonuclease III - uncultured
marine bacterium EB0_39H12
Length = 218
Score = 43.2 bits (97), Expect = 0.003
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 19 LQYRFRDRSLLLQAMTHAS--HHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPG 76
L+Y F+D L A+TH S H N +RLEFLGDAIL+ ++ L+ G
Sbjct: 9 LEYSFQDEELFQLALTHKSLSSHNN------ERLEFLGDAILNLYVSERLFNTYGNLKEG 62
Query: 77 ALTDLRSALVN 87
LT ++++V+
Sbjct: 63 KLTRFKASIVS 73
>UniRef50_A1ZI45 Cluster: Ribonuclease III; n=2;
Flexibacteraceae|Rep: Ribonuclease III - Microscilla
marina ATCC 23134
Length = 248
Score = 43.2 bits (97), Expect = 0.003
Identities = 23/95 (24%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNV---LTDCYQRLEFLGDAILDYLITRHLYEDKR 71
+++++ ++ + +L A++H S +++ + +RLE+LGDAIL ++ +L++
Sbjct: 24 IKQIIGHKPFNLALYQLALSHTSASKSLQDGFKESNERLEYLGDAILGAIVADYLFKKYP 83
Query: 72 CHSPGALTDLRSALVNNTIFATLAARHGFHKYFRH 106
G LT++R+ +VN L+ + G R+
Sbjct: 84 FKEEGFLTEIRARIVNRESLNQLSRKMGIQDLIRY 118
>UniRef50_Q57E81 Cluster: Ribonuclease 3; n=19; Rhizobiales|Rep:
Ribonuclease 3 - Brucella abortus
Length = 245
Score = 43.2 bits (97), Expect = 0.003
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHS 74
LE +RF + L +A+TH+S + Y+RLEFLGD +L + L+E S
Sbjct: 22 LEERTGHRFLNLKRLERALTHSSVQAPARAN-YERLEFLGDRVLGLTVAEMLFEAFPEAS 80
Query: 75 PGALTDLRSALVNNTIFATLAARHG 99
G L+ +ALVN A +A G
Sbjct: 81 EGELSVRLNALVNAETCAAIADEIG 105
>UniRef50_A4U1G9 Cluster: Ribonuclease III; n=2;
Magnetospirillum|Rep: Ribonuclease III -
Magnetospirillum gryphiswaldense
Length = 229
Score = 42.7 bits (96), Expect = 0.004
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 19 LQYRFRDRSLLLQAMTHASHHRNVL---TDCYQRLEFLGDAILDYLITRHLYEDKRCHSP 75
L + F LL QA+TH S + Y+RLEFLGD +L ++ L+ +
Sbjct: 13 LGHEFAQSQLLTQALTHPSVAQGRAPRRNTPYERLEFLGDRVLGLVVADMLFHRFPTEAE 72
Query: 76 GALTDLRSALVNNTIFATLAARHG 99
GAL +ALV A +A + G
Sbjct: 73 GALARRHAALVRRESLAVVAGQIG 96
>UniRef50_A6R9C5 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 380
Score = 42.7 bits (96), Expect = 0.004
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 25 DRSLLLQAMTHAS-HHRNVLT---DCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTD 80
D+ L TH H+ N + Y+R+E LGDA ++ + TR +++ G L+
Sbjct: 136 DKQLQTAMFTHEGVHNPNTASLPEKNYERMELLGDAYIEIIATRLVWDTFPRLPAGRLSQ 195
Query: 81 LRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQ 122
+R LV N A + +G + + + P + + +K + KI+
Sbjct: 196 IRELLVKNETLAEYTSLYGLDQKLQ-VPPNIRDQIKTWTKIK 236
>UniRef50_Q5LNK5 Cluster: Ribonuclease 3; n=28;
Alphaproteobacteria|Rep: Ribonuclease 3 - Silicibacter
pomeroyi
Length = 225
Score = 42.7 bits (96), Expect = 0.004
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 16 ERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSP 75
E L Y F LL++A+TH S + D QRLEFLGD +L ++ L E + +
Sbjct: 11 EARLGYSFERPELLVRALTHGSISSSTRQD-NQRLEFLGDRVLGLVMATALLEADKDATE 69
Query: 76 GALTDLRSALVNNTIFATLA 95
G L +ALV A +A
Sbjct: 70 GQLAPRFNALVRKETCAEVA 89
>UniRef50_Q2S2W4 Cluster: Ribonuclease III; n=1; Salinibacter ruber
DSM 13855|Rep: Ribonuclease III - Salinibacter ruber
(strain DSM 13855)
Length = 248
Score = 42.3 bits (95), Expect = 0.005
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY---QRLEFLGDAILDYLITRHLYEDKR 71
+E+++ D S +A+TH S R + +RLEFLGDA+LD + LY+
Sbjct: 21 IEQLVGRPVDDLSHYRRALTHRSLLRVHPARTFRSNERLEFLGDALLDVFVGEVLYDRFP 80
Query: 72 CHSPGALTDLRSALVNNTIFATLA 95
GALT LR+ LV+ AT A
Sbjct: 81 EKDEGALTRLRARLVSERPLATYA 104
>UniRef50_A7CV23 Cluster: Ribonuclease III; n=1; Opitutaceae
bacterium TAV2|Rep: Ribonuclease III - Opitutaceae
bacterium TAV2
Length = 250
Score = 42.3 bits (95), Expect = 0.005
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRNV--LTDCYQRLEFLGDAILDYLITRHLYEDKRC 72
L+ + ++F +LL A+TH S ++ D QRLE LGDA+L L+T LY
Sbjct: 24 LQMRIGHKFTTPALLETAITHPSWLQDNPGAPDNNQRLELLGDAVLQLLLTHELYTLFPT 83
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G L+ R+ L A LA G R
Sbjct: 84 DREGPLSKRRAVLSRGGFLAQLAREVGLDTVLR 116
>UniRef50_A6GP51 Cluster: Ribonuclease III; n=1; Limnobacter sp.
MED105|Rep: Ribonuclease III - Limnobacter sp. MED105
Length = 226
Score = 42.3 bits (95), Expect = 0.005
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 19 LQYRFRDRSLLLQAMTHASH--HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPG 76
+ Y F+D++LL A+TH S+ H N +RLEFLGD++L+ + L+E G
Sbjct: 1 MAYSFKDQALLRLALTHRSYSSHHN------ERLEFLGDSVLNCAASILLFETHPDMDEG 54
Query: 77 ALTDLRSALVNNTIFA 92
++ +RS LV A
Sbjct: 55 KMSRVRSHLVKQDCLA 70
>UniRef50_Q8CPI1 Cluster: Ribonuclease 3; n=16;
Staphylococcus|Rep: Ribonuclease 3 - Staphylococcus
epidermidis (strain ATCC 12228)
Length = 245
Score = 42.3 bits (95), Expect = 0.005
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 19 LQYRFRDRSLLLQAMTHASHHRNV---LTDCYQRLEFLGDAILDYLITRHLYEDKRCHSP 75
L F++ L QA +H+S + + +RLEFLGDA+L+ ++R+L+ D+ H P
Sbjct: 24 LGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLF-DRHPHLP 82
Query: 76 -GALTDLRSALV 86
G LT +R+ +V
Sbjct: 83 EGNLTKMRATIV 94
>UniRef50_Q26GJ2 Cluster: Ribonuclease III (Rnase III),
double-stranded RNA binding motif; n=14;
Bacteroidetes|Rep: Ribonuclease III (Rnase III),
double-stranded RNA binding motif - Flavobacteria
bacterium BBFL7
Length = 246
Score = 41.9 bits (94), Expect = 0.006
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRH 106
Y+RLEFLGDAIL +I ++Y + G LT +RS +V+ L G + +
Sbjct: 58 YERLEFLGDAILGSVIAEYIYNEVPHGDEGYLTKMRSKIVSREHLNELGLDFGLIDFAKT 117
Query: 107 MSPGLN 112
P N
Sbjct: 118 QVPERN 123
>UniRef50_A7LVV6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 352
Score = 41.9 bits (94), Expect = 0.006
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 7 RELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDC-----YQRLEFLGDAILDYL 61
++ Y R+L + R+ L QA+ H S +V +D +RLEFLGDAILD +
Sbjct: 28 KDRESYLCFYRILGFYPRNIQLYEQALLHKS--TSVRSDKGRPLNNERLEFLGDAILDAI 85
Query: 62 ITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRH 106
+ +Y+ G LT+ RS +V LA G K ++
Sbjct: 86 VGDIVYKRFEGKREGFLTNTRSKIVQRETLNKLAVEIGLDKLIKY 130
>UniRef50_A1CZL8 Cluster: RNase3 domain protein; n=3;
Trichocomaceae|Rep: RNase3 domain protein - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 373
Score = 41.9 bits (94), Expect = 0.006
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 25 DRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
D SL L TH ++ + Y RLE LGDA ++ + TR ++ S G ++ +R
Sbjct: 141 DSSLELAVFTHPGLSKDSKST-YDRLEILGDAYIELIATRFIWSRFEDISSGQISQIREL 199
Query: 85 LVNNTIFATLAARHG 99
LV N + A +G
Sbjct: 200 LVKNETLSEFATLYG 214
>UniRef50_Q83I82 Cluster: Ribonuclease 3; n=3; Tropheryma
whipplei|Rep: Ribonuclease 3 - Tropheryma whipplei
(strain TW08/27) (Whipple's bacillus)
Length = 223
Score = 41.9 bits (94), Expect = 0.006
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 28 LLLQAMTHASHH-RNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
LL A H S N +RLEFLGDA+L +++ +L+E ++ G L+ RS +V
Sbjct: 20 LLRTAFVHKSFSFENGACQNNERLEFLGDAVLGLVVSHYLFETCPEYTEGQLSAARSYIV 79
Query: 87 NNTIFATLA 95
+ T A +A
Sbjct: 80 SGTSIAQIA 88
>UniRef50_Q4AEV8 Cluster: Ribonuclease III; n=1; Chlorobium
phaeobacteroides BS1|Rep: Ribonuclease III - Chlorobium
phaeobacteroides BS1
Length = 208
Score = 41.5 bits (93), Expect = 0.008
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 32 AMTHASHHRNVLTDCY---QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
A+ H S + V+ +RLE+LGDAIL ++ +L++ + G LT++RS +V+
Sbjct: 5 ALRHKSATKKVINGLRLNNERLEYLGDAILSAVVADYLFKRFPYKNEGFLTEMRSKIVSR 64
Query: 89 TIFATLAARHGFHK 102
T LA + G K
Sbjct: 65 TSLNKLANKLGLVK 78
>UniRef50_A3I0H3 Cluster: Putative ribonuclease III; n=1;
Algoriphagus sp. PR1|Rep: Putative ribonuclease III -
Algoriphagus sp. PR1
Length = 250
Score = 41.5 bits (93), Expect = 0.008
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHK 102
+RLEFLGDAIL ++ +L++ G LT+ RS LVN + G K
Sbjct: 65 ERLEFLGDAILGAVVAEYLFQKYPYRDEGFLTETRSKLVNRESLNATGVKIGLKK 119
>UniRef50_Q9P6D6 Cluster: Related to Ribonuclease III; n=2;
Sordariales|Rep: Related to Ribonuclease III -
Neurospora crassa
Length = 352
Score = 41.5 bits (93), Expect = 0.008
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 25 DRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
D +L A+TH N Y+RLE++GDA L+ + + +Y+ G R
Sbjct: 67 DPALKKAALTHPGKANNDPVASYERLEWIGDAYLELIASSFIYQTFPTLPAGKSAQRREM 126
Query: 85 LVNNTIFATLAARHGFHK 102
L+ NT + +G K
Sbjct: 127 LIRNTTLGEFSVYYGLDK 144
>UniRef50_Q9A805 Cluster: Ribonuclease 3; n=4;
Alphaproteobacteria|Rep: Ribonuclease 3 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 231
Score = 41.5 bits (93), Expect = 0.008
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 5 VERELHGYEQLERVLQYRFRDRSLLLQAMTHAS--HHRNVLTDCYQRLEFLGDAILDYLI 62
++R + LER + +RF DR LL +A+THAS + D + LEF+GD +L L
Sbjct: 1 MDRRVAAVGDLERRIGHRFEDRELLERALTHASVGDGAKKVRD-NEVLEFIGDRVLGLLA 59
Query: 63 TRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
L + G L +ALV+ A +A +
Sbjct: 60 AEALAQRFPKAKEGELAPRLNALVSRETCARVARK 94
>UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usitatus
Ellin6076|Rep: Ribonuclease III - Solibacter usitatus
(strain Ellin6076)
Length = 271
Score = 41.1 bits (92), Expect = 0.011
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 15 LERVLQYRFRDRSLLLQAMTHAS---HHR------NVLTDCYQRLEFLGDAILDYLITRH 65
LE L YRF D LL +A+TH+S +R + L D ++LEFLGD++L +LI
Sbjct: 8 LELKLDYRFNDPELLRRALTHSSLANENRPGAGVGSPLND-NEQLEFLGDSVLGFLIAEA 66
Query: 66 LYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
L + G L+ L++ LV+ +A R Y
Sbjct: 67 LVRRFPEYHEGDLSRLKAHLVSAAHLHGVARRLDLGSY 104
>UniRef50_A7I5W5 Cluster: Ribonuclease III; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribonuclease III -
Methanoregula boonei (strain 6A8)
Length = 196
Score = 41.1 bits (92), Expect = 0.011
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTD---CYQRLEF--LGDAILDYLITRHLYE 68
+LER++ Y F ++ L++A+TH+++ V+ C + + LGDA+L + L E
Sbjct: 12 ELERIIGYHFFEQQHLIRALTHSAYANEVIQKNRICLTQDAYSTLGDAVLKTSLILFLME 71
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
K GA+T + L +N A + R ++ R
Sbjct: 72 -KGLQEKGAITRAKEQLEDNASLAQIGRRLKIRRFVR 107
>UniRef50_Q31MP4 Cluster: Ribonuclease III; n=2; Synechococcus
elongatus|Rep: Ribonuclease III - Synechococcus sp.
(strain PCC 7942) (Anacystis nidulans R2)
Length = 247
Score = 40.7 bits (91), Expect = 0.014
Identities = 26/75 (34%), Positives = 35/75 (46%)
Query: 31 QAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTI 90
Q + A H + D Y RLEFLGDA+L I L S G + LRS L ++
Sbjct: 38 QQIDRALTHPSAAEDHYDRLEFLGDAVLRLAIADFLDRHYPDLSVGDCSALRSELGSDRT 97
Query: 91 FATLAARHGFHKYFR 105
A +AA + + R
Sbjct: 98 LAAIAASYNLERVLR 112
>UniRef50_O32367 Cluster: Ribonuclease III; n=1; Campylobacter
jejuni|Rep: Ribonuclease III - Campylobacter jejuni
Length = 73
Score = 40.7 bits (91), Expect = 0.014
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 21 YRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYED--KRCHSPGAL 78
Y F D + + A+TH S ++ + RL +GDA+LD ++ +L+ + +RC L
Sbjct: 1 YAFPDTNHFIPALTHKSFKKSYNNE---RLVLIGDAVLDLVVGEYLFHNIRQRCRRRFIL 57
Query: 79 TDLRSALVNNTIFATLA 95
+ L +VN FAT+A
Sbjct: 58 S-LEQVVVNEKSFATIA 73
>UniRef50_A7DEA6 Cluster: Ribonuclease III; n=3;
Alphaproteobacteria|Rep: Ribonuclease III -
Methylobacterium extorquens PA1
Length = 256
Score = 40.7 bits (91), Expect = 0.014
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHH-RNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCH 73
LE + + F D +LL A+TH S ++ YQRLEFLGD +L + LY+
Sbjct: 27 LEARIGHVFADPTLLPLALTHVSKAGQSGRVGSYQRLEFLGDRVLGLAVAETLYKALPGA 86
Query: 74 SPGALTDLRSALVNNTIFATLA 95
G L+ + LV A +A
Sbjct: 87 EEGELSRRLAGLVRRETCAVVA 108
>UniRef50_A7I515 Cluster: Ribonuclease III; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribonuclease III -
Methanoregula boonei (strain 6A8)
Length = 154
Score = 40.7 bits (91), Expect = 0.014
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLT---DCYQRLEFLGDAILDYLITRHLYEDK 70
+LE L + +DR++L A+T ++ T DC L +GDA+L ++ LYE
Sbjct: 7 ELETRLGFTIKDRTILDAALTRQAYINENPTAGNDCMDPLATVGDAVLGAVVATRLYE-S 65
Query: 71 RCHSPGALTDLRSALVNNTIFATLAARHGFHKYFR 105
G LT + VN A + HK+ R
Sbjct: 66 GIRDKGTLTSEKIRGVNRDKTRAFAEKFQLHKFIR 100
>UniRef50_Q02555 Cluster: Ribonuclease 3; n=2; Saccharomyces
cerevisiae|Rep: Ribonuclease 3 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 471
Score = 40.7 bits (91), Expect = 0.014
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHK 102
+RLEFLGD+IL+ ++T +Y +S G L+ LR LV+N + + FH+
Sbjct: 238 ERLEFLGDSILNSVMTLIIYNKFPDYSEGQLSTLRMNLVSNEQIKQWSIMYNFHE 292
>UniRef50_Q9X0I6 Cluster: Ribonuclease 3; n=3; Thermotogaceae|Rep:
Ribonuclease 3 - Thermotoga maritima
Length = 240
Score = 40.7 bits (91), Expect = 0.014
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 6 ERELHGYEQLERVLQYRFRDRSLLLQAMTHASH--HRNVL----TDCYQRLEFLGDAILD 59
E E E+ ++ F++ LL +A+ H+S+ +N + ++LEFLGDA+L+
Sbjct: 3 ESERKIVEEFQKETGINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLE 62
Query: 60 YLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
+ LY+ G L ++SA + + A ++ + K+
Sbjct: 63 LFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKF 106
>UniRef50_Q6KHN3 Cluster: Ribonuclease 3; n=1; Mycoplasma
mobile|Rep: Ribonuclease 3 - Mycoplasma mobile
Length = 246
Score = 40.7 bits (91), Expect = 0.014
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 8 ELHGYEQLERVLQYRFRDRSLLLQAMTH---ASHHRNVLTDCYQRLEFLGDAILDYLITR 64
++ G E + F+D +QA+TH A+ H N+ + Y LEF+GDAIL +
Sbjct: 6 KIEGLENFLTLNNIIFKDIKYYIQALTHKTYANEHANI--ESYDILEFIGDAILQMKSSI 63
Query: 65 HLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
+++ + + G + +R+ V ++ + L+ + G K +S G +E L++ VKI +
Sbjct: 64 FIFQHFQNITEGEASLIRAKNVCSSGLSELSKKLGLSKLLL-ISKG-SEHLRENVKINAD 121
>UniRef50_A4MAM8 Cluster: Ribonuclease III; n=1; Petrotoga mobilis
SJ95|Rep: Ribonuclease III - Petrotoga mobilis SJ95
Length = 253
Score = 40.3 bits (90), Expect = 0.019
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 27 SLLLQAMTHASH---HRNVLT--DCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDL 81
S+L +A+ H S+ + N+ D +RLEFLGDA+L+ +I+ LY + S G ++
Sbjct: 33 SVLFEALCHKSYVFDNENIQRKLDSNERLEFLGDAVLELVISEFLYNNYHL-SEGEMSKA 91
Query: 82 RSALVNNTIFATLAAR 97
R+ + + I A +A +
Sbjct: 92 RAIIGSEIILAEVALK 107
>UniRef50_Q5KKA7 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 839
Score = 40.3 bits (90), Expect = 0.019
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 25 DRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLY-----EDKRCHSPGALT 79
D L LQA+T A+ NV Y+RLE LGD +L ++ T H Y D
Sbjct: 499 DPELALQAIT-AAEGLNVPRWTYERLEILGDTLLKFMTTLHFYLLGGGADSEDDMNKVWQ 557
Query: 80 DLRSALVNNTIFATLAARHGFHKYFRH 106
D R L++N A + G KY R+
Sbjct: 558 D-RHMLISNRTLTANAVKQGLVKYVRN 583
>UniRef50_Q8A2E8 Cluster: Ribonuclease 3; n=6; Bacteroidales|Rep:
Ribonuclease 3 - Bacteroides thetaiotaomicron
Length = 311
Score = 40.3 bits (90), Expect = 0.019
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRH 106
+RLEFLGDAILD ++ +Y+ G LT+ RS +V LA G K ++
Sbjct: 59 ERLEFLGDAILDAIVGDIVYKRFEGKREGFLTNTRSKIVQRETLNKLAVEIGLDKLIKY 117
>UniRef50_Q7NAZ2 Cluster: Rnc; n=1; Mycoplasma gallisepticum|Rep:
Rnc - Mycoplasma gallisepticum
Length = 669
Score = 39.9 bits (89), Expect = 0.025
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 31 QAMTHASHHRNV-LTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNT 89
+A+TH S+ + L YQRLEFLGDAI++ ++ +L+ S G +T R ++ +
Sbjct: 465 EALTHNSYANEMHLKYNYQRLEFLGDAIINKIVAEYLFNHSD-SSEGEMTKDRIKIIQSN 523
Query: 90 IFATLAARHGFHKYFR 105
A + Y R
Sbjct: 524 TLIKAATQLELINYIR 539
>UniRef50_Q2RJX2 Cluster: Ribonuclease III; n=1; Moorella
thermoacetica ATCC 39073|Rep: Ribonuclease III -
Moorella thermoacetica (strain ATCC 39073)
Length = 233
Score = 39.9 bits (89), Expect = 0.025
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 32 AMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTI 90
A+TH ++ + L QRLEFLGDA+L ++ +LY+ G LT +R+A+V
Sbjct: 29 ALTHPTYAFEHHLPGDNQRLEFLGDAVLGLVVATYLYQHFPQLPEGDLTRMRAAVVCEAS 88
Query: 91 FATLAAR 97
+A R
Sbjct: 89 LVKVARR 95
>UniRef50_Q6CC90 Cluster: Similarities with sp|Q02555 Saccharomyces
cerevisiae RNT1; n=1; Yarrowia lipolytica|Rep:
Similarities with sp|Q02555 Saccharomyces cerevisiae
RNT1 - Yarrowia lipolytica (Candida lipolytica)
Length = 467
Score = 39.9 bits (89), Expect = 0.025
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRH 106
Y+RLEF+GD+I++ ++T+ +Y+ L+ LR ++ N + AA +GF R
Sbjct: 190 YERLEFVGDSIVNNILTKIIYDVFPGDDQSHLSFLRGQVIANIVLCRWAAIYGFPSKLRV 249
Query: 107 MSPGLN 112
S L+
Sbjct: 250 ASSVLS 255
>UniRef50_Q5AQL5 Cluster: ER lumen protein retaining receptor; n=6;
Pezizomycotina|Rep: ER lumen protein retaining receptor
- Emericella nidulans (Aspergillus nidulans)
Length = 1073
Score = 39.9 bits (89), Expect = 0.025
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 24 RDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSP-GALTDLR 82
+D L TH ++ T Y RLE LGDA ++ LI+ L +K H P G ++ +R
Sbjct: 116 KDDRLERAVFTHPGVAKDSRTT-YDRLEILGDAYIE-LISTKLIWNKFQHIPSGRISQIR 173
Query: 83 SALVNNTIFATLAARHGFHK 102
LV N A A ++G K
Sbjct: 174 ELLVKNETLAEYATQYGIDK 193
>UniRef50_Q820I0 Cluster: Ribonuclease 3; n=4; Proteobacteria|Rep:
Ribonuclease 3 - Nitrosomonas europaea
Length = 245
Score = 39.9 bits (89), Expect = 0.025
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 19 LQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGAL 78
L Y F+ LL +A+TH R++ +R EFLGD++L+ ++ L++ G L
Sbjct: 31 LGYTFKQPDLLREALTH----RSLGFPNNERFEFLGDSVLNCAVSTLLFKRFPSLPEGDL 86
Query: 79 TDLRSALVNNTIFATLAARHG 99
T LR+ VN LA+ G
Sbjct: 87 TRLRANFVNQQALHRLASALG 107
>UniRef50_Q6NGH3 Cluster: Ribonuclease 3; n=6; Corynebacterium|Rep:
Ribonuclease 3 - Corynebacterium diphtheriae
Length = 249
Score = 39.9 bits (89), Expect = 0.025
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 26 RSLLLQAMTHASH-HRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
R LL+ A+TH S + N + +RLEFLGD++L + LY+ ++ +R++
Sbjct: 36 RELLVLALTHRSFANENGMLPNNERLEFLGDSVLGLSVAGQLYQQYTSSPESDISKMRAS 95
Query: 85 LVNNTIFATLA 95
+V+ A +A
Sbjct: 96 IVSRYGLADIA 106
>UniRef50_O83787 Cluster: Ribonuclease 3; n=1; Treponema
pallidum|Rep: Ribonuclease 3 - Treponema pallidum
Length = 254
Score = 39.5 bits (88), Expect = 0.033
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDC----YQRLEFLGDAILDYLITRHLYED 69
+L+ L +FRD + L QA++H S + C +R+EFLGDA+L + LY
Sbjct: 26 RLQETLGVKFRDPTALDQALSHRSLFSSKEDHCGVRHNERMEFLGDAVLGAVAAACLYRA 85
Query: 70 KRCHSPGALTDLRSALVNNTIFATLA 95
G L ++ LV+ + +A
Sbjct: 86 LPDSHEGDLAKTKAVLVSTDTLSDIA 111
>UniRef50_Q7NH89 Cluster: Ribonuclease III; n=3; Cyanobacteria|Rep:
Ribonuclease III - Gloeobacter violaceus
Length = 242
Score = 39.1 bits (87), Expect = 0.044
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 28 LLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVN 87
LL +A+ H S + RLEFLGD IL L LY + G +T +RS LV+
Sbjct: 33 LLHRALIHPSWSAQEGGEDNDRLEFLGDEILRLLAAEFLYRADPELTVGEMTAVRSVLVS 92
Query: 88 NTIFATLA 95
+ A LA
Sbjct: 93 DVALAELA 100
>UniRef50_Q7R2M2 Cluster: GLP_546_48378_50642; n=2; Giardia
intestinalis|Rep: GLP_546_48378_50642 - Giardia lamblia
ATCC 50803
Length = 754
Score = 39.1 bits (87), Expect = 0.044
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 44 TDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
TD +QRLE LGDA+L +++T L S G L +L+ LV N
Sbjct: 329 TDVFQRLELLGDAVLGFIVTARLLCLFPDASVGTLVELKMELVRN 373
Score = 37.5 bits (83), Expect = 0.13
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
YQ+LE LGDA L + HL+ + GALT +R + N++ L R
Sbjct: 645 YQKLELLGDAFLKCSLALHLHALHPTLTEGALTRMRQSAETNSVLGRLTKR 695
>UniRef50_Q2U9V4 Cluster: Predicted protein; n=3;
Eurotiomycetidae|Rep: Predicted protein - Aspergillus
oryzae
Length = 234
Score = 39.1 bits (87), Expect = 0.044
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHK 102
Y RLE LGDA ++ + T+ +++ R G ++ +R LV N A AA +G +
Sbjct: 23 YDRLEILGDAYIELIATKLIWKRFREIPSGRISQIRELLVKNETLAEYAAGYGLDR 78
>UniRef50_Q6YPW7 Cluster: Ribonuclease 3; n=3; Candidatus
Phytoplasma|Rep: Ribonuclease 3 - Onion yellows
phytoplasma
Length = 238
Score = 39.1 bits (87), Expect = 0.044
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASH--HRNVLTDCYQRLEFLGDAILDYLITRHLYEDK 70
+ L + L ++ +L QA+TH+S+ +N + +RLEFLGDAI+ L+ +LY
Sbjct: 5 QTLFQTLNITPQNLTLYKQALTHSSYSNEQNPPQEDNERLEFLGDAIVGLLMADYLYSQS 64
Query: 71 RCHSPGALTDLRSALV 86
+ G +T R+ V
Sbjct: 65 K-EDEGIMTKKRAQAV 79
>UniRef50_Q06VS3 Cluster: Ribonuclease III; n=1; Trichoplusia ni
ascovirus 2c|Rep: Ribonuclease III - Trichoplusia ni
ascovirus 2c
Length = 678
Score = 38.7 bits (86), Expect = 0.058
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 47 YQRLEFLGDAILD-YLIT--RHLYED--KRCHSPGALTDLRSALVNNTIFATLAARHGFH 101
Y+ E++GDAI++ Y+I RH Y H+ G +T LRS V + + R G H
Sbjct: 158 YEFFEYIGDAIINRYIIEYIRHKYVGIANTSHNIGIMTKLRSVFVGKRNLSKCSIRIGLH 217
Query: 102 KYFRHMSPGLNEVLKKYVKIQEENGHSISEEVTDSSY 138
K+ P L++Y + ++ + I + + ++
Sbjct: 218 KFLNCAFPLDMVRLEQYAQTIHDSPNEIDTQFDEPNF 254
>UniRef50_A7BCY7 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 240
Score = 38.7 bits (86), Expect = 0.058
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 25 DRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRS 83
D LL A+ H S+ +RLEFLGD++L +I + LYE + L+ +R+
Sbjct: 27 DAPLLQLALVHRSYANEAGGIANNERLEFLGDSVLSIVIAQKLYEQYPDVAESDLSRMRA 86
Query: 84 ALVNNTIFATLAARHG 99
A V+ A A R G
Sbjct: 87 ATVSQQPLAAAARRIG 102
>UniRef50_Q5KKA8 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 875
Score = 38.7 bits (86), Expect = 0.058
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 28 LLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLY 67
L LQA+T A +NV Y+RLE LGD +L + IT H+Y
Sbjct: 451 LALQALT-APSSQNVTPWTYERLEILGDTLLKFFITIHVY 489
>UniRef50_Q3SE73 Cluster: Ribonuclease with two RNaseIII domains;
n=2; Paramecium tetraurelia|Rep: Ribonuclease with two
RNaseIII domains - Paramecium tetraurelia
Length = 725
Score = 38.3 bits (85), Expect = 0.077
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
YQ LE LGD ++ YL + L+ED + + L+ R L+ N
Sbjct: 362 YQNLEMLGDVVIKYLTSAMLFEDSKYKTENTLSSARVRLITN 403
Score = 37.5 bits (83), Expect = 0.13
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 21/102 (20%)
Query: 45 DCYQRLEFLGDAILDYLIT-------RHLYEDKR----CHS----------PGALTDLRS 83
D ++RLEF GDAIL+ L+ LY + R C PG L +
Sbjct: 551 DQFERLEFFGDAILELLVIVNVHKECEKLYYNPRQQQLCREGKITQKLLLCPGMLHTAKI 610
Query: 84 ALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEEN 125
+L+++ T+A H FH+Y R++ + +KK + + ++
Sbjct: 611 SLLDSGFMGTMAIYHNFHQYARNLPKEIQNSIKKALALLRQD 652
>UniRef50_A0DYG6 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 822
Score = 38.3 bits (85), Expect = 0.077
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 31 QAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTI 90
+A++ AS++R++ Y+ LE LGD+IL YL T + + + L+D RS +VNN
Sbjct: 370 RAISRASYNRDIN---YELLETLGDSILKYLATVSVSLGPQNTNENILSDQRSQIVNNNF 426
Query: 91 FATLAARHGFHKYFRHM 107
++ + F ++
Sbjct: 427 IGKHLFKYQYFGLFHYV 443
>UniRef50_Q6FJM4 Cluster: Candida glabrata strain CBS138 chromosome
M complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome M complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 449
Score = 38.3 bits (85), Expect = 0.077
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNN 88
+RLEFLGD+IL+ ++T +Y + G LT+LR LV N
Sbjct: 215 ERLEFLGDSILNTVMTMIIYNKFPSLNEGNLTELRKKLVKN 255
>UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema
denticola|Rep: Ribonuclease 3 - Treponema denticola
Length = 246
Score = 38.3 bits (85), Expect = 0.077
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 22 RFRDRSLLLQAMTHAS---HHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGAL 78
+F+D LL A H S H N + +RLEFLGD++L + +LY+ G L
Sbjct: 26 KFKDLRLLDLAFHHRSFSNEHNNFHAN-NERLEFLGDSVLGLVAASYLYKSFEDRPEGEL 84
Query: 79 TDLRSALVNNTIFATLAARHGFHKY 103
++++ V+ + A++ Y
Sbjct: 85 AKIKASAVSEDALSKTASKLNISNY 109
>UniRef50_P75233 Cluster: Ribonuclease 3; n=3; Mycoplasma|Rep:
Ribonuclease 3 - Mycoplasma pneumoniae
Length = 282
Score = 38.3 bits (85), Expect = 0.077
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
Y RLEFLGDA++D+++ + L+E ++ G LT + +V
Sbjct: 55 YDRLEFLGDALIDFIVAKKLFELYPNYNEGMLTRTKIEIV 94
>UniRef50_Q0BTG2 Cluster: Ribonuclease III; n=4;
Rhodospirillales|Rep: Ribonuclease III - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 258
Score = 37.9 bits (84), Expect = 0.10
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHAS-----HHRNVLT-----DCYQRLEFLGDAILDYLI 62
E E +L +RF R LL +A+TH S H + + +RLEF+GD +L ++
Sbjct: 20 EAAEALLSHRFARRDLLAEALTHRSAVKIMHGQTGQSLPRGAGSNERLEFVGDRVLGLVV 79
Query: 63 TRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPG 110
L E G L + LV+ + A +A + G + ++PG
Sbjct: 80 AEWLVERFPLEQEGELGRRLAHLVSQPVLAGIAEQSGLPQIL-SVAPG 126
>UniRef50_Q1GTU3 Cluster: Ribonuclease III; n=1; Sphingopyxis
alaskensis|Rep: Ribonuclease III - Sphingopyxis
alaskensis (Sphingomonas alaskensis)
Length = 226
Score = 37.5 bits (83), Expect = 0.13
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 25 DRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSA 84
D +L A+TH S R D YQRLEFLGD +L ++ LY S G ++
Sbjct: 20 DLTLYDLALTHGSTGR---AD-YQRLEFLGDRVLGLVLASELYTRFPAASEGEMSSRLHV 75
Query: 85 LVNNTIFATLAAR 97
L + A +A R
Sbjct: 76 LASGATCAAIAQR 88
>UniRef50_A3CSF0 Cluster: Ribonuclease III; n=1; Methanoculleus
marisnigri JR1|Rep: Ribonuclease III - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 258
Score = 37.5 bits (83), Expect = 0.13
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 31 QAMTHASH--HRNVLTDCYQ---RLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSAL 85
+A+TH S+ H + ++ RLEFLG+ +LD++I HLY + PG + + R +
Sbjct: 59 RALTHRSYANHGEYPAETFEDNERLEFLGNYVLDFVIADHLYGEYDL-PPGEM-NRRLQV 116
Query: 86 VNNTIFATLAARHG 99
NT A + R G
Sbjct: 117 TRNTKLAEIVRRQG 130
>UniRef50_Q54EI2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 357
Score = 37.1 bits (82), Expect = 0.18
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 38 HHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTI 90
H + ++ LEF GD+ L YLI+ +L K ++P LT LRS +N +
Sbjct: 23 HQPKTHKERFEILEFHGDSTLSYLISTYLLNYKTYYNPHLLTKLRSLASSNQL 75
>UniRef50_Q3SD86 Cluster: Dicer-like ribonuclease with helicase and
Rnase III domains; n=1; Paramecium tetraurelia|Rep:
Dicer-like ribonuclease with helicase and Rnase III
domains - Paramecium tetraurelia
Length = 1797
Score = 37.1 bits (82), Expect = 0.18
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 2 CECVERELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYL 61
C+C E + + ++ D + L +T + +N + Y+RLEFLGD++LD +
Sbjct: 1538 CKCNFVEFQNTKNILQISNLNQNDINESL--LTQLNQQQNRIDMSYERLEFLGDSVLDSV 1595
Query: 62 ITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEV 114
+ L ++ L + +V N A + + ++ H P L++V
Sbjct: 1596 VVEWLVKEFNKEKVEDLALKKQCVVCNKALALVTLHYKLDQFLLH--PTLHKV 1646
Score = 33.1 bits (72), Expect = 2.9
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 15 LERVLQYRFRDRSLLLQAMTHAS 37
LE ++ Y+F D+S+L+QA+TH S
Sbjct: 1503 LENIIGYKFNDQSILIQAITHQS 1525
>UniRef50_Q6CIQ4 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 478
Score = 37.1 bits (82), Expect = 0.18
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTI 90
+RLEFLGD+IL+ +T +Y G L+ LR L+NN +
Sbjct: 231 ERLEFLGDSILNTTMTTIIYNKFPHFDEGQLSQLRMRLINNEL 273
>UniRef50_A7TI15 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 478
Score = 37.1 bits (82), Expect = 0.18
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHK 102
+RLEFLGD++L+ ++T +Y + G L+ LR LV+N + + F K
Sbjct: 226 ERLEFLGDSVLNTIMTMIIYNKFPTFTEGQLSKLRMNLVSNERIKSWTYLYNFDK 280
>UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep:
Ribonuclease 3 - Leptospira interrogans
Length = 247
Score = 37.1 bits (82), Expect = 0.18
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 13 EQLERVLQYRFRDRSLLLQAMTHASH---HRNVLTDCYQRLEFLGDAILDYLITRHLYED 69
++L + + +F A H+S+ ++ +L D +RLEFLGD++L + R L+
Sbjct: 22 QKLSKKIGIKFSKVEYYNTAFIHSSYKNENQEILED-NERLEFLGDSVLGLVAARSLFRK 80
Query: 70 KRCHSPGALTDLRSALVNNTIFATLAARHGFHKY 103
+ G L+ ++S +V+ I +++ + +Y
Sbjct: 81 YPKANEGELSRIKSRIVSTPILNSISEKLELSEY 114
>UniRef50_P22192 Cluster: Double-strand-specific pac1 ribonuclease;
n=2; Schizosaccharomyces pombe|Rep:
Double-strand-specific pac1 ribonuclease -
Schizosaccharomyces pombe (Fission yeast)
Length = 363
Score = 37.1 bits (82), Expect = 0.18
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 41 NVLTDCY-QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHG 99
N L D + +RLEFLGD+ + TR ++ G+L+ LR+ V N A +G
Sbjct: 164 NELLDIHNERLEFLGDSFFNLFTTRIIFSKFPQMDEGSLSKLRAKFVGNESADKFARLYG 223
Query: 100 FHK 102
F K
Sbjct: 224 FDK 226
>UniRef50_Q0UFS5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 474
Score = 36.3 bits (80), Expect = 0.31
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 47 YQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGF 100
Y+RLE+LGDA ++ + +R LY L R LV N A + +GF
Sbjct: 189 YERLEYLGDAYIELIASRALYNRFPHVDVPQLCSWRERLVENVALAKFSEAYGF 242
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.322 0.134 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,057,037
Number of Sequences: 1657284
Number of extensions: 6462949
Number of successful extensions: 16542
Number of sequences better than 10.0: 283
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 16094
Number of HSP's gapped (non-prelim): 366
length of query: 157
length of database: 575,637,011
effective HSP length: 94
effective length of query: 63
effective length of database: 419,852,315
effective search space: 26450695845
effective search space used: 26450695845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 68 (31.5 bits)
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