GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001834-TA|BGIBMGA001834-PA|IPR000999|Ribonuclease III
         (157 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.        213   2e-57
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    24   2.6  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        23   5.9  
AY117994-1|AAM66793.1|  120|Anopheles gambiae glucose-6-phosphat...    23   5.9  
AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive ...    23   5.9  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score =  213 bits (521), Expect = 2e-57
 Identities = 98/126 (77%), Positives = 111/126 (88%)

Query: 7    RELHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHL 66
            R L G+E+ E+ L YRFRDRS LLQAMTHAS+  N LTDCYQRLEFLGDAILDYLITRHL
Sbjct: 1977 RLLQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHL 2036

Query: 67   YEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEENG 126
            YED+R HSPGALTDLRSALVNNTIFA+LA RHGFHKYF H+SPGL EV+ ++V+IQ+ENG
Sbjct: 2037 YEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENG 2096

Query: 127  HSISEE 132
            H I+EE
Sbjct: 2097 HRITEE 2102



 Score = 35.5 bits (78), Expect = 8e-04
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 27   SLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALV 86
            +++LQA+T ++ +  +  +   RLE +GD+ L Y IT +LY        G L+ LRS  V
Sbjct: 1665 AIILQALTMSNANDGINLE---RLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQV 1721

Query: 87   NNTIFATLAAR 97
            +N     L  R
Sbjct: 1722 SNLNLYRLGRR 1732


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 91  FATLAARHGFHKYFRHMSPGLNEVLKKYVK--IQEENGHSISEEVTDSSYVQWLRTDKSR 148
           + T +    +  Y   ++P + E  ++ VK  +Q+ +G    E V++ SY++   ++  R
Sbjct: 309 YDTSSTAMSYTLYELALNPEVQERARECVKQTLQKYDGKLSYEAVSEMSYLEQCISETLR 368

Query: 149 VHTP 152
            H P
Sbjct: 369 KHPP 372


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 113 EVLKKYVKIQEENGHSISEEVTDSSYVQWLRT 144
           EV+ KY +I   + H++ E+V+ S+  Q   T
Sbjct: 131 EVINKYQQIANTHYHAMLEKVSYSNPTQTAAT 162


>AY117994-1|AAM66793.1|  120|Anopheles gambiae glucose-6-phosphate
           dehydrogenase protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 111 LNEVLKKYVKIQEENGHSISEEVTDSSYV 139
           L E  ++Y+K+QE+      E  + + YV
Sbjct: 15  LKEKCRQYIKVQEDQAEKFEEFWSVNFYV 43


>AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive
           serpin-related proteinISerpF1 protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 113 EVLKKYVKIQEENGHSISEEVTDSSYVQWLRT 144
           EV+ KY +I   + H++ E+V+ S+  Q   T
Sbjct: 32  EVINKYQQIANTHYHAMLEKVSYSNPTQTAAT 63


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.134    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,240
Number of Sequences: 2123
Number of extensions: 6194
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 6
length of query: 157
length of database: 516,269
effective HSP length: 59
effective length of query: 98
effective length of database: 391,012
effective search space: 38319176
effective search space used: 38319176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)