Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001834-TA|BGIBMGA001834-PA|IPR000999|Ribonuclease III
(157 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase K... 167 2e-41
AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein. 167 2e-41
AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein. 167 2e-41
BC041162-1|AAH41162.1| 722|Homo sapiens RNASEN protein protein. 50 4e-06
AK001121-1|BAA91511.1| 769|Homo sapiens protein ( Homo sapiens ... 50 4e-06
AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein. 50 4e-06
AF116910-1|AAD29637.1| 541|Homo sapiens putative ribonuclease I... 50 4e-06
BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein. 47 3e-05
AB209501-1|BAD92738.1| 432|Homo sapiens nuclear RNase III Drosh... 37 0.035
>AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase
K12H4.8-like protein protein.
Length = 1912
Score = 167 bits (405), Expect = 2e-41
Identities = 74/116 (63%), Positives = 94/116 (81%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
+ G+E E+ + YRF++++ LLQA THAS+H N +TDCYQRLEFLGDAILDYLIT+HLYE
Sbjct: 1653 ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYE 1712
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
D R HSPG LTDLRSALVNNTIFA+LA ++ +HKYF+ +SP L V+ +V+ Q E
Sbjct: 1713 DPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLE 1768
Score = 32.7 bits (71), Expect = 0.57
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 28 LLLQAMT--HASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSAL 85
L+LQA+T +AS N+ +RLE LGD+ L + IT +L+ G L+ +RS
Sbjct: 1286 LILQALTLSNASDGFNL-----ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK 1340
Query: 86 VNNTIFATLAARHG 99
V+N L + G
Sbjct: 1341 VSNCNLYRLGKKKG 1354
>AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein.
Length = 1924
Score = 167 bits (405), Expect = 2e-41
Identities = 74/116 (63%), Positives = 94/116 (81%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
+ G+E E+ + YRF++++ LLQA THAS+H N +TDCYQRLEFLGDAILDYLIT+HLYE
Sbjct: 1665 ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYE 1724
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
D R HSPG LTDLRSALVNNTIFA+LA ++ +HKYF+ +SP L V+ +V+ Q E
Sbjct: 1725 DPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLE 1780
Score = 32.7 bits (71), Expect = 0.57
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 28 LLLQAMT--HASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSAL 85
L+LQA+T +AS N+ +RLE LGD+ L + IT +L+ G L+ +RS
Sbjct: 1298 LILQALTLSNASDGFNL-----ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK 1352
Query: 86 VNNTIFATLAARHG 99
V+N L + G
Sbjct: 1353 VSNCNLYRLGKKKG 1366
>AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein.
Length = 1922
Score = 167 bits (405), Expect = 2e-41
Identities = 74/116 (63%), Positives = 94/116 (81%)
Query: 9 LHGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAILDYLITRHLYE 68
+ G+E E+ + YRF++++ LLQA THAS+H N +TDCYQRLEFLGDAILDYLIT+HLYE
Sbjct: 1663 ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYE 1722
Query: 69 DKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKKYVKIQEE 124
D R HSPG LTDLRSALVNNTIFA+LA ++ +HKYF+ +SP L V+ +V+ Q E
Sbjct: 1723 DPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLE 1778
Score = 32.7 bits (71), Expect = 0.57
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 28 LLLQAMT--HASHHRNVLTDCYQRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSAL 85
L+LQA+T +AS N+ +RLE LGD+ L + IT +L+ G L+ +RS
Sbjct: 1296 LILQALTLSNASDGFNL-----ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK 1350
Query: 86 VNNTIFATLAARHG 99
V+N L + G
Sbjct: 1351 VSNCNLYRLGKKKG 1364
>BC041162-1|AAH41162.1| 722|Homo sapiens RNASEN protein protein.
Length = 722
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRC 72
+ E + F LL +A T + N LT + QR+EFLGD+I+ + T +L+
Sbjct: 457 EFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPD 516
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKY 103
H G LT LRS+LVNN A +A G +Y
Sbjct: 517 HHEGHLTLLRSSLVNNRTQAKVAEELGMQEY 547
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
+RLEFLGDA++++L + HLY G L R+A+V N A LA +
Sbjct: 314 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKK 363
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRN 41
L++++ Y F+DR LL AMTH SHH N
Sbjct: 227 LDKLIGYTFQDRCLLQLAMTHPSHHLN 253
>AK001121-1|BAA91511.1| 769|Homo sapiens protein ( Homo sapiens
cDNA FLJ10259 fis, clone HEMBB1000947, highly similar to
Homo sapiens clone HAW100 putative ribonuclease III
mRNA. ).
Length = 769
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRC 72
+ E + F LL +A T + N LT + QR+EFLGD+I+ + T +L+
Sbjct: 504 EFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPD 563
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKY 103
H G LT LRS+LVNN A +A G +Y
Sbjct: 564 HHEGHLTLLRSSLVNNRTQAKVAEELGMQEY 594
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
+RLEFLGDA++++L + HLY G L R+A+V N A LA +
Sbjct: 361 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKK 410
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRN 41
L++++ Y F+DR LL AMTH SHH N
Sbjct: 274 LDKLIGYTFQDRCLLQLAMTHPSHHLN 300
>AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.
Length = 1374
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRC 72
+ E + F LL +A T + N LT + QR+EFLGD+I+ + T +L+
Sbjct: 1109 EFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPD 1168
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKY 103
H G LT LRS+LVNN A +A G +Y
Sbjct: 1169 HHEGHLTLLRSSLVNNRTQAKVAEELGMQEY 1199
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
+RLEFLGDA++++L + HLY G L R+A+V N A LA +
Sbjct: 966 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKK 1015
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRN 41
L++++ Y F+DR LL AMTH SHH N
Sbjct: 879 LDKLIGYTFQDRCLLQLAMTHPSHHLN 905
>AF116910-1|AAD29637.1| 541|Homo sapiens putative ribonuclease III
protein.
Length = 541
Score = 50.0 bits (114), Expect = 4e-06
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRC 72
+ E + F LL +A T + N LT + QR+EFLGD+I+ + T +L+
Sbjct: 276 EFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPD 335
Query: 73 HSPGALTDLRSALVNNTIFATLAARHGFHKY 103
H G LT LRS+LVNN A +A G +Y
Sbjct: 336 HHEGHLTLLRSSLVNNRTQAKVAEELGMQEY 366
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
+RLEFLGDA++++L + HLY G L R+A+V N A LA +
Sbjct: 133 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKK 182
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRN 41
L++++ Y F+DR LL AMTH SHH N
Sbjct: 46 LDKLIGYTFQDRCLLQLAMTHPSHHLN 72
>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
Length = 1192
Score = 46.8 bits (106), Expect = 3e-05
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 14 QLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCY-QRLEFLGDAILDYLITRHLYEDKRC 72
+ E + F LL +A T + N LT + QR+EFLGD+I+ + T +L+
Sbjct: 1072 EFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPD 1131
Query: 73 HSPGALTDLRSALVNNTIFATLAARHG 99
H G LT LRS+LVNN A +A G
Sbjct: 1132 HHEGHLTLLRSSLVNNRTQAKVAEELG 1158
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 48 QRLEFLGDAILDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAAR 97
+RLEFLGDA++++L + HLY G L R+A+V N A LA +
Sbjct: 929 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKK 978
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRN 41
L++++ Y F+DR LL AMTH SHH N
Sbjct: 842 LDKLIGYTFQDRCLLQLAMTHPSHHLN 868
>AB209501-1|BAD92738.1| 432|Homo sapiens nuclear RNase III Drosha
variant protein.
Length = 432
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 15 LERVLQYRFRDRSLLLQAMTHASHHRN 41
L++++ Y F+DR LL AMTH SHH N
Sbjct: 330 LDKLIGYTFQDRCLLQLAMTHPSHHLN 356
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.322 0.134 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,409,677
Number of Sequences: 224733
Number of extensions: 844068
Number of successful extensions: 2151
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2128
Number of HSP's gapped (non-prelim): 23
length of query: 157
length of database: 73,234,838
effective HSP length: 84
effective length of query: 73
effective length of database: 54,357,266
effective search space: 3968080418
effective search space used: 3968080418
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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