Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001833-TA|BGIBMGA001833-PA|IPR003100|Argonaute and Dicer
protein, PAZ, IPR000999|Ribonuclease III
(1126 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17KP3 Cluster: Dicer-1; n=2; Aedes aegypti|Rep: Dicer-... 289 3e-76
UniRef50_Q9VCU9 Cluster: Endoribonuclease Dcr-1; n=18; Sophophor... 280 1e-73
UniRef50_UPI0000D5738B Cluster: PREDICTED: similar to CG4792-PA;... 268 4e-70
UniRef50_Q86MA9 Cluster: Dicer-1; n=5; Coelomata|Rep: Dicer-1 - ... 261 7e-68
UniRef50_UPI00015B5D4A Cluster: PREDICTED: similar to dicer-1; n... 259 3e-67
UniRef50_UPI0000DB7B4D Cluster: PREDICTED: similar to Dicer-1 CG... 245 5e-63
UniRef50_Q4SZJ8 Cluster: Chromosome undetermined SCAF11600, whol... 196 2e-48
UniRef50_Q9UPY3 Cluster: Endoribonuclease Dicer; n=50; Eumetazoa... 196 2e-48
UniRef50_UPI0000586635 Cluster: PREDICTED: similar to Dicer prot... 177 1e-42
UniRef50_P34529 Cluster: Endoribonuclease dcr-1; n=2; Caenorhabd... 128 8e-28
UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA;... 117 2e-24
UniRef50_UPI00015B633C Cluster: PREDICTED: similar to dicer-1; n... 109 3e-22
UniRef50_A7P4V9 Cluster: Chromosome chr4 scaffold_6, whole genom... 99 3e-19
UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|... 98 1e-18
UniRef50_Q2HTA7 Cluster: Helicase, C-terminal; Argonaute and Dic... 96 4e-18
UniRef50_Q174T8 Cluster: Dicer-1; n=3; Culicidae|Rep: Dicer-1 - ... 95 1e-17
UniRef50_Q9LXW7 Cluster: Putative uncharacterized protein T15B3_... 95 1e-17
UniRef50_UPI0000DB7B59 Cluster: PREDICTED: similar to Dicer-1 CG... 94 2e-17
UniRef50_Q01HF5 Cluster: OSIGBa0157K09-H0214G12.2 protein; n=4; ... 92 7e-17
UniRef50_A7LFZ6 Cluster: Dicer-like protein; n=2; Oryza sativa (... 92 7e-17
UniRef50_Q9SP32 Cluster: Endoribonuclease Dicer homolog; n=8; Em... 92 9e-17
UniRef50_Q10HL3 Cluster: Type III restriction enzyme, res subuni... 88 1e-15
UniRef50_Q9M9P8 Cluster: T17B22.1 protein; n=13; Eukaryota|Rep: ... 87 2e-15
UniRef50_A7PV34 Cluster: Chromosome chr4 scaffold_32, whole geno... 87 2e-15
UniRef50_A7PXV4 Cluster: Chromosome chr15 scaffold_37, whole gen... 85 1e-14
UniRef50_Q0IWV3 Cluster: Os10g0485600 protein; n=7; Eukaryota|Re... 84 2e-14
UniRef50_P84634 Cluster: Dicer-like protein 4; n=1; Arabidopsis ... 74 2e-11
UniRef50_A3A0R6 Cluster: Putative uncharacterized protein; n=4; ... 72 8e-11
UniRef50_Q95YG3 Cluster: Double-strand-specific ribonuclease; n=... 67 2e-09
UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121; Proteobacteria|R... 66 4e-09
UniRef50_A1C9M6 Cluster: Dicer-like protein 2 [Includes: Endorib... 58 2e-06
UniRef50_A0ZZX0 Cluster: Ribonuclease III; n=2; Bifidobacterium ... 57 3e-06
UniRef50_P0C5H7 Cluster: Dicer-like protein 2 [Includes: Endorib... 55 1e-05
UniRef50_Q6A7R5 Cluster: Ribonuclease III; n=2; Actinomycetales|... 54 2e-05
UniRef50_Q6LMS2 Cluster: Ribonuclease 3; n=19; Gammaproteobacter... 54 2e-05
UniRef50_A1U2V5 Cluster: Ribonuclease III; n=5; Bacteria|Rep: Ri... 54 2e-05
UniRef50_UPI000023D196 Cluster: hypothetical protein FG04408.1; ... 54 3e-05
UniRef50_Q8G7H1 Cluster: Ribonuclease 3; n=2; Bifidobacterium lo... 54 3e-05
UniRef50_Q9KPB2 Cluster: Ribonuclease 3; n=22; Gammaproteobacter... 53 5e-05
UniRef50_Q190G5 Cluster: Ribonuclease III; n=3; Peptococcaceae|R... 52 9e-05
UniRef50_Q9PB98 Cluster: Ribonuclease 3; n=14; Gammaproteobacter... 52 9e-05
UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27; Epsilonproteobact... 52 9e-05
UniRef50_O51648 Cluster: Ribonuclease 3; n=3; Borrelia burgdorfe... 52 9e-05
UniRef50_A6PN64 Cluster: Ribonuclease III; n=1; Victivallis vade... 51 2e-04
UniRef50_Q0E5R5 Cluster: Putative dicer-like protein; n=1; Mucor... 51 2e-04
UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria (c... 51 2e-04
UniRef50_Q2GNP6 Cluster: Putative uncharacterized protein; n=1; ... 50 3e-04
UniRef50_A1DE13 Cluster: Dicer-like protein 1 [Includes: Endorib... 50 3e-04
UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core eu... 50 4e-04
UniRef50_Q2VF18 Cluster: Dicer-like protein 2 [Includes: Endorib... 50 4e-04
UniRef50_A2RAF3 Cluster: Dicer-like protein 1 [Includes: Endorib... 50 4e-04
UniRef50_Q97IA4 Cluster: Ribonuclease 3; n=3; Clostridium|Rep: R... 50 5e-04
UniRef50_Q3B0H4 Cluster: Ribonuclease III; n=2; Synechococcus|Re... 49 6e-04
UniRef50_Q6SFI8 Cluster: Ribonuclease III; n=2; Bacteria|Rep: Ri... 49 8e-04
UniRef50_A1AWQ6 Cluster: Ribonuclease III; n=2; sulfur-oxidizing... 49 8e-04
UniRef50_Q7SCC1 Cluster: Dicer-like protein 2 [Includes: Endorib... 49 8e-04
UniRef50_UPI0000E0E146 Cluster: ribonuclease III; n=1; alpha pro... 48 0.001
UniRef50_Q46IK9 Cluster: Ribonuclease III, bacterial; n=2; Proch... 48 0.001
UniRef50_Q09884 Cluster: Protein Dicer (Cell cycle control prote... 48 0.001
UniRef50_A6R2T0 Cluster: Predicted protein; n=1; Ajellomyces cap... 48 0.001
UniRef50_Q7VRR0 Cluster: Ribonuclease 3; n=4; Gammaproteobacteri... 48 0.001
UniRef50_A4J683 Cluster: Ribonuclease III; n=1; Desulfotomaculum... 48 0.002
UniRef50_A6SDY7 Cluster: Putative uncharacterized protein; n=1; ... 48 0.002
UniRef50_Q5NER3 Cluster: Ribonuclease 3; n=11; Francisella tular... 48 0.002
UniRef50_Q8XJN8 Cluster: Ribonuclease 3; n=20; Bacteria|Rep: Rib... 47 0.003
UniRef50_Q2GCL4 Cluster: Ribonuclease III; n=1; Neorickettsia se... 47 0.003
UniRef50_Q1YS28 Cluster: Ribonuclease III; n=1; gamma proteobact... 47 0.003
UniRef50_Q1JXG8 Cluster: Ribonuclease III; n=1; Desulfuromonas a... 47 0.003
UniRef50_A2Y2L5 Cluster: Putative uncharacterized protein; n=2; ... 46 0.004
UniRef50_Q6MEK1 Cluster: Ribonuclease 3; n=1; Candidatus Protoch... 46 0.004
UniRef50_Q1NXA7 Cluster: Ribonuclease III; n=2; delta proteobact... 46 0.006
UniRef50_Q1FET5 Cluster: Ribonuclease III; n=1; Clostridium phyt... 46 0.006
UniRef50_Q6NGH3 Cluster: Ribonuclease 3; n=6; Corynebacterium|Re... 46 0.006
UniRef50_A4GHU1 Cluster: Ribonuclease III; n=1; uncultured marin... 46 0.008
UniRef50_Q4FUV6 Cluster: Ribonuclease 3; n=6; Gammaproteobacteri... 46 0.008
UniRef50_Q2VF19 Cluster: Dicer-like protein 1 [Includes: Endorib... 46 0.008
UniRef50_A7BCY7 Cluster: Putative uncharacterized protein; n=1; ... 45 0.010
UniRef50_A6GP51 Cluster: Ribonuclease III; n=1; Limnobacter sp. ... 45 0.013
UniRef50_Q55FS1 Cluster: Putative RNase III; n=1; Dictyostelium ... 45 0.013
UniRef50_Q3SE71 Cluster: Ribonuclease with two RNaseIII domains;... 45 0.013
UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus h... 45 0.013
UniRef50_A7B5M4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.018
UniRef50_A3LS79 Cluster: Predicted protein; n=1; Pichia stipitis... 44 0.018
UniRef50_Q83I82 Cluster: Ribonuclease 3; n=3; Tropheryma whipple... 44 0.018
UniRef50_Q7MU11 Cluster: Ribonuclease III; n=1; Porphyromonas gi... 44 0.024
UniRef50_Q2RJX2 Cluster: Ribonuclease III; n=1; Moorella thermoa... 44 0.024
UniRef50_Q26GJ2 Cluster: Ribonuclease III (Rnase III), double-st... 44 0.024
UniRef50_A4XJW5 Cluster: Ribonuclease III; n=1; Caldicellulosiru... 44 0.024
UniRef50_Q556G5 Cluster: Putative uncharacterized protein; n=2; ... 44 0.024
UniRef50_Q6ANV0 Cluster: Ribonuclease 3; n=1; Desulfotalea psych... 44 0.024
UniRef50_Q1DW80 Cluster: Dicer-like protein 2 [Includes: Endorib... 44 0.024
UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usita... 44 0.031
UniRef50_A0DYG6 Cluster: Chromosome undetermined scaffold_7, who... 44 0.031
UniRef50_Q0UL22 Cluster: Dicer-like protein 2 [Includes: Endorib... 44 0.031
UniRef50_Q4AEV8 Cluster: Ribonuclease III; n=1; Chlorobium phaeo... 43 0.041
UniRef50_A4A3U5 Cluster: Ribonuclease III; n=1; Congregibacter l... 43 0.041
UniRef50_A1WT17 Cluster: Ribonuclease III; n=2; Gammaproteobacte... 43 0.041
UniRef50_Q67PF5 Cluster: Ribonuclease 3; n=1; Symbiobacterium th... 43 0.041
UniRef50_Q3A4Q8 Cluster: Ribonuclease 3; n=1; Pelobacter carbino... 43 0.041
UniRef50_Q820I0 Cluster: Ribonuclease 3; n=4; Proteobacteria|Rep... 43 0.041
UniRef50_P75233 Cluster: Ribonuclease 3; n=3; Mycoplasma|Rep: Ri... 43 0.041
UniRef50_Q5FJJ7 Cluster: Ribonuclease 3; n=8; Lactobacillus|Rep:... 43 0.041
UniRef50_P51837 Cluster: Ribonuclease 3; n=5; Gammaproteobacteri... 43 0.041
UniRef50_Q9S338 Cluster: Ribonuclease III; n=1; Prochlorococcus ... 43 0.054
UniRef50_Q2LVR4 Cluster: Ribonuclease III; n=1; Syntrophus acidi... 43 0.054
UniRef50_Q7R2M2 Cluster: GLP_546_48378_50642; n=2; Giardia intes... 43 0.054
UniRef50_Q3SD86 Cluster: Dicer-like ribonuclease with helicase a... 43 0.054
UniRef50_Q72C44 Cluster: Ribonuclease 3; n=4; Desulfovibrionacea... 43 0.054
UniRef50_UPI00015B6129 Cluster: PREDICTED: similar to ribonuclea... 42 0.072
UniRef50_Q0F3I4 Cluster: Ribonuclease III; n=1; Mariprofundus fe... 42 0.072
UniRef50_Q8CPI1 Cluster: Ribonuclease 3; n=16; Staphylococcus|Re... 42 0.072
UniRef50_Q9KA05 Cluster: Ribonuclease 3; n=38; Bacilli|Rep: Ribo... 42 0.072
UniRef50_Q98514 Cluster: Putative protein A464R; n=6; Chloroviru... 42 0.072
UniRef50_Q1Q4S0 Cluster: Similar to ribonuclease III; n=1; Candi... 42 0.095
UniRef50_Q0AYW0 Cluster: Ribonuclease III; n=1; Syntrophomonas w... 42 0.095
UniRef50_A3EQH6 Cluster: DsRNA-specific ribonuclease; n=1; Lepto... 42 0.095
UniRef50_Q6FJM4 Cluster: Candida glabrata strain CBS138 chromoso... 42 0.095
UniRef50_A7EYF3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.095
UniRef50_A5UJK3 Cluster: Ribonuclease III (DsRNA-specific), Rnc;... 42 0.095
UniRef50_Q6KHN3 Cluster: Ribonuclease 3; n=1; Mycoplasma mobile|... 42 0.095
UniRef50_A1HN82 Cluster: Ribonuclease III; n=4; Clostridia|Rep: ... 42 0.13
UniRef50_A0LGM1 Cluster: Ribonuclease III; n=1; Syntrophobacter ... 42 0.13
UniRef50_A6QZ52 Cluster: Predicted protein; n=1; Ajellomyces cap... 42 0.13
UniRef50_Q8Z023 Cluster: Ribonuclease 3; n=6; Cyanobacteria|Rep:... 42 0.13
UniRef50_P22192 Cluster: Double-strand-specific pac1 ribonucleas... 42 0.13
UniRef50_Q1IJU6 Cluster: Ribonuclease III; n=1; Acidobacteria ba... 41 0.17
UniRef50_A6EDW5 Cluster: Ribonuclease III; n=1; Pedobacter sp. B... 41 0.17
UniRef50_A6DSV3 Cluster: Ribonuclease III; n=1; Lentisphaera ara... 41 0.17
UniRef50_Q5KEY8 Cluster: Expressed protein; n=1; Filobasidiella ... 41 0.17
UniRef50_Q5A694 Cluster: Probable ribonuclease III; n=2; Candida... 41 0.17
UniRef50_A7TR32 Cluster: Putative uncharacterized protein; n=1; ... 41 0.17
UniRef50_Q53844 Cluster: Ribonuclease 3; n=2; Spiroplasma citri|... 41 0.17
UniRef50_Q8RGX3 Cluster: Ribonuclease 3; n=3; Fusobacterium nucl... 41 0.17
UniRef50_A2QX45 Cluster: Dicer-like protein 2-2 [Includes: Endor... 41 0.17
UniRef50_Q0UI93 Cluster: Dicer-like protein 1 [Includes: Endorib... 41 0.17
UniRef50_Q6BCJ9 Cluster: Dicer-related RNase III protein Dcr2p; ... 41 0.22
UniRef50_A7F817 Cluster: Putative uncharacterized protein; n=1; ... 41 0.22
UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|R... 41 0.22
UniRef50_Q5F9X7 Cluster: Ribonuclease 3; n=5; Betaproteobacteria... 41 0.22
UniRef50_A4RHU9 Cluster: Dicer-like protein 2 [Includes: Endorib... 41 0.22
UniRef50_Q67B98 Cluster: Ribonuclease III-like protein; n=2; Mur... 40 0.29
UniRef50_Q1D5X9 Cluster: Ribonuclease III; n=1; Myxococcus xanth... 40 0.29
UniRef50_Q0LPI7 Cluster: Ribonuclease III; n=1; Herpetosiphon au... 40 0.29
UniRef50_A3EU88 Cluster: DsRNA-specific ribonuclease; n=1; Lepto... 40 0.29
UniRef50_A1WMW1 Cluster: Ribonuclease III; n=1; Verminephrobacte... 40 0.29
UniRef50_Q6CC90 Cluster: Similarities with sp|Q02555 Saccharomyc... 40 0.29
UniRef50_Q9NRR4 Cluster: Ribonuclease 3; n=59; Eumetazoa|Rep: Ri... 40 0.29
UniRef50_Q8XXI2 Cluster: Putative uncharacterized protein; n=3; ... 40 0.38
UniRef50_Q7NH89 Cluster: Ribonuclease III; n=3; Cyanobacteria|Re... 40 0.38
UniRef50_Q318D8 Cluster: Ribonuclease III; n=5; Prochlorococcus ... 40 0.38
UniRef50_Q3VWC5 Cluster: Ribonuclease III; n=1; Prosthecochloris... 40 0.38
UniRef50_Q7KNF1 Cluster: Ribonuclease; n=8; Coelomata|Rep: Ribon... 40 0.38
UniRef50_Q4A589 Cluster: Ribonuclease 3; n=1; Mycoplasma synovia... 40 0.38
UniRef50_Q5P9U8 Cluster: Ribonuclease 3; n=2; Anaplasma|Rep: Rib... 40 0.38
UniRef50_Q31HP3 Cluster: Ribonuclease III; n=2; Gammaproteobacte... 40 0.51
UniRef50_A6LNE7 Cluster: Ribonuclease III; n=1; Thermosipho mela... 40 0.51
UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus Desul... 40 0.51
UniRef50_Q6CIQ4 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 40 0.51
UniRef50_A6SBX3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.51
UniRef50_Q02555 Cluster: Ribonuclease 3; n=2; Saccharomyces cere... 40 0.51
UniRef50_Q5GTI3 Cluster: Ribonuclease 3; n=26; Rickettsiales|Rep... 40 0.51
UniRef50_O01326 Cluster: Ribonuclease 3; n=2; Caenorhabditis|Rep... 40 0.51
UniRef50_A6C1C3 Cluster: Ribonuclease III; n=1; Planctomyces mar... 39 0.67
UniRef50_A0NL28 Cluster: Ribonuclease III; n=3; Leuconostocaceae... 39 0.67
UniRef50_Q9FKF0 Cluster: Emb|CAB88120.1; n=1; Arabidopsis thalia... 39 0.67
UniRef50_A7RFC2 Cluster: Predicted protein; n=3; Nematostella ve... 39 0.67
UniRef50_Q6BX76 Cluster: Similar to CA1420|CaRNT1 Candida albica... 39 0.67
UniRef50_A5E7T6 Cluster: Putative uncharacterized protein; n=1; ... 39 0.67
UniRef50_Q97QG6 Cluster: Ribonuclease 3; n=46; Lactobacillales|R... 39 0.67
UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep: Ri... 39 0.67
UniRef50_Q7WD32 Cluster: Ribonuclease 3; n=62; Proteobacteria|Re... 39 0.67
UniRef50_Q8KAN7 Cluster: Ribonuclease 3; n=9; Chlorobiaceae|Rep:... 39 0.88
UniRef50_Q2S2W4 Cluster: Ribonuclease III; n=1; Salinibacter rub... 38 1.2
UniRef50_A4E6T0 Cluster: Putative uncharacterized protein; n=1; ... 38 1.2
UniRef50_Q2U0L3 Cluster: DsRNA-specific nuclease Dicer and relat... 38 1.2
UniRef50_Q5UQT7 Cluster: Probable ribonuclease 3; n=1; Acanthamo... 38 1.2
UniRef50_Q7S8J7 Cluster: Dicer-like protein 1 [Includes: Endorib... 38 1.2
UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n... 38 1.5
UniRef50_A0L633 Cluster: Ribonuclease III; n=1; Magnetococcus sp... 38 1.5
UniRef50_Q6LX27 Cluster: Ribonuclease III family:Double-stranded... 38 1.5
UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2; Chlor... 38 2.0
UniRef50_A7HCB5 Cluster: Ribonuclease III; n=3; Cystobacterineae... 38 2.0
UniRef50_A4CTC0 Cluster: Putative ribonuclease III; n=2; Synecho... 38 2.0
UniRef50_A7TI15 Cluster: Putative uncharacterized protein; n=1; ... 38 2.0
UniRef50_UPI00006A9EC6 Cluster: hypothetical protein CHGG_04734;... 37 2.7
UniRef50_Q0IDN5 Cluster: Ribonuclease III; n=9; Cyanobacteria|Re... 37 2.7
UniRef50_A5IYM8 Cluster: Ribonuclease III; n=1; Mycoplasma agala... 37 2.7
UniRef50_A1APX0 Cluster: Ribonuclease III; n=1; Pelobacter propi... 37 2.7
UniRef50_A0WD16 Cluster: Ribonuclease III; n=1; Geobacter lovley... 37 2.7
UniRef50_A7PX71 Cluster: Chromosome chr12 scaffold_36, whole gen... 37 2.7
UniRef50_Q6BCJ7 Cluster: Dicer-related RNase III protein Dcl1p; ... 37 2.7
UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp. ... 37 2.7
UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio bacte... 37 2.7
UniRef50_Q2H0G2 Cluster: Dicer-like protein 1 [Includes: Endorib... 37 2.7
UniRef50_A3I0H3 Cluster: Putative ribonuclease III; n=1; Algorip... 37 3.6
UniRef50_A7SIA4 Cluster: Predicted protein; n=1; Nematostella ve... 37 3.6
UniRef50_A5DC21 Cluster: Putative uncharacterized protein; n=1; ... 37 3.6
UniRef50_Q6F1N5 Cluster: Ribonuclease 3; n=4; Mollicutes|Rep: Ri... 37 3.6
UniRef50_Q74AX1 Cluster: Ribonuclease 3; n=4; Geobacter|Rep: Rib... 37 3.6
UniRef50_Q3ZXY9 Cluster: Ribonuclease 3; n=3; Dehalococcoides|Re... 37 3.6
UniRef50_Q87WF6 Cluster: Type III effector HopO1-2; n=5; Pseudom... 36 4.7
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 36 4.7
UniRef50_Q6FQ28 Cluster: Candida glabrata strain CBS138 chromoso... 36 4.7
UniRef50_Q5L6E3 Cluster: Ribonuclease 3; n=8; Chlamydiaceae|Rep:... 36 4.7
UniRef50_Q96J94 Cluster: Piwi-like protein 1; n=34; Euteleostomi... 36 4.7
UniRef50_UPI00006C0E2B Cluster: PREDICTED: similar to piwi-like ... 36 6.2
UniRef50_A7CV23 Cluster: Ribonuclease III; n=1; Opitutaceae bact... 36 6.2
UniRef50_A1ZI45 Cluster: Ribonuclease III; n=2; Flexibacteraceae... 36 6.2
UniRef50_Q59FI1 Cluster: Valyl-tRNA synthetase-like protein; n=5... 36 6.2
UniRef50_Q5KKA8 Cluster: Putative uncharacterized protein; n=2; ... 36 6.2
UniRef50_Q92JB0 Cluster: Ribonuclease 3; n=8; Rickettsia|Rep: Ri... 36 6.2
UniRef50_Q88WK0 Cluster: Ribonuclease 3; n=5; Lactobacillales|Re... 36 6.2
UniRef50_UPI0000D55F95 Cluster: PREDICTED: similar to CG40300-PA... 36 8.2
UniRef50_A4GK15 Cluster: Ribonuclease III; n=1; uncultured marin... 36 8.2
UniRef50_A2SDH3 Cluster: Ribonuclease III; n=1; Methylibium petr... 36 8.2
UniRef50_Q8ISG8 Cluster: Macronuclear development protein 1; n=3... 36 8.2
UniRef50_Q1ZXG9 Cluster: Argonaut-like protein; n=1; Dictyosteli... 36 8.2
UniRef50_A7BJS4 Cluster: Aubergine; n=4; Endopterygota|Rep: Aube... 36 8.2
UniRef50_Q9P6D6 Cluster: Related to Ribonuclease III; n=2; Sorda... 36 8.2
UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema denticol... 36 8.2
UniRef50_Q9X0I6 Cluster: Ribonuclease 3; n=3; Thermotogaceae|Rep... 36 8.2
UniRef50_Q6N6C1 Cluster: Ribonuclease 3; n=14; Rhizobiales|Rep: ... 36 8.2
UniRef50_Q8TC59 Cluster: Piwi-like protein 2; n=27; Eumetazoa|Re... 36 8.2
>UniRef50_Q17KP3 Cluster: Dicer-1; n=2; Aedes aegypti|Rep: Dicer-1 -
Aedes aegypti (Yellowfever mosquito)
Length = 2193
Score = 289 bits (709), Expect = 3e-76
Identities = 158/333 (47%), Positives = 196/333 (58%), Gaps = 19/333 (5%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
+ FD +++K+AVV PWYRNQDQPQYF VAEIC+ LSP S FP +++TF +YY KY +
Sbjct: 1058 YTFDSNQFKDAVVMPWYRNQDQPQYFYVAEICYHLSPKSSFPGLNYSTFEEYYYKKYSIQ 1117
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
I KQPLLDVDHTSARLN LTPRYVNRKGVALP SSE T+RAKRE L+QKQ+L+PELC
Sbjct: 1118 IQNCKQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILIPELCT 1177
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLG---IPHPHARPPPLDFGW 473
HPF A LW A V LPC LYRINALL+A+EIR+ VA ++GLG I P L+FGW
Sbjct: 1178 IHPFPASLWRAAVCLPCILYRINALLLADEIRKEVAHDLGLGTTDIADESFEWPILNFGW 1237
Query: 474 SLAEVL---------SADAXXXXXXXXXXXXXXXXXXXXXPGDDSAETNTXXXXXXXXXX 524
SLA+VL + A D SA
Sbjct: 1238 SLADVLKKSREAKLNAQSAVEMPPSETNKIEVLEEEITEKESDKSAAIEEEKKENGEIEK 1297
Query: 525 XTKTINDILQE--KEDAENGFEIGTWSNEMASSIPEDTDFDEYLEPLPPNLTFCTSASGS 582
KT ND+L+E K+ GF+IGTWSNEMA + ++ D LP N+ C+ +
Sbjct: 1298 EEKTANDLLEEADKKLKAEGFQIGTWSNEMAETFEDEMMLDGDNWGLPANVDLCSRNRTN 1357
Query: 583 ASWCDPIQ---KPKSEFNPTRSYSVADSDCSYM 612
+ P K + + R Y+ DSD SY+
Sbjct: 1358 IRYGSPTSWEVGTKEQSSDLRYYT--DSDGSYV 1388
Score = 208 bits (508), Expect = 7e-52
Identities = 93/119 (78%), Positives = 102/119 (85%)
Query: 849 EFDFDFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHP 908
EF FD+QP L HPGPSPS+ILQALTMSNANDGINLERLET+GDSFLK+AIT YLYC +
Sbjct: 1637 EFSFDYQPNLNNHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYE 1696
Query: 909 NVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKL 967
NVHEGKLSH+RSKQVSNLNLYRLGR K LG MIA+KFEPHDNWLPPC+ P L+ L
Sbjct: 1697 NVHEGKLSHLRSKQVSNLNLYRLGRRKVLGESMIATKFEPHDNWLPPCYYVPKELEQAL 1755
Score = 124 bits (299), Expect = 1e-26
Identities = 70/140 (50%), Positives = 88/140 (62%), Gaps = 20/140 (14%)
Query: 983 ENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLPRHLAA 1042
E CFIPYNL+TQHSIPDKS+ADCVEALIGAYL+ECGPRGALL M+WLGI VLP +
Sbjct: 1824 EYFACFIPYNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLP--VYE 1881
Query: 1043 LPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAPPSPLLRYVEDPE 1102
+P+ E + + P + +R ++ G +Q VYG P SPLL Y +P+
Sbjct: 1882 VPYD-------ENNPKVPGSSQRY-------EKDGIAMQSVYGYWVPPKSPLLMYAPNPQ 1927
Query: 1103 GELEKMLSGKELEQSAYSDS 1122
LE +L G SA+ DS
Sbjct: 1928 QTLEHLLDG----YSAFEDS 1943
Score = 38.7 bits (86), Expect = 0.88
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 109 GTDSCRLSLQVPAFPVYTRSGEVRVSLQHAPDADVRISPXXXXXXXXXXXXXXSEVLRVR 168
G + +L +V AFP++TRSGEV+V+L + + ++ ++VLR++
Sbjct: 944 GILTTKLIPKVSAFPIFTRSGEVKVALNLCDERPI-LNQEQLERIHMFINYTFTKVLRLQ 1002
Query: 169 RRGMRLQSEGSTHNNYYVVPTI 190
+ + L + N +++VPTI
Sbjct: 1003 KY-LMLYDPDAMENCFFIVPTI 1023
>UniRef50_Q9VCU9 Cluster: Endoribonuclease Dcr-1; n=18;
Sophophora|Rep: Endoribonuclease Dcr-1 - Drosophila
melanogaster (Fruit fly)
Length = 2249
Score = 280 bits (687), Expect = 1e-73
Identities = 151/317 (47%), Positives = 190/317 (59%), Gaps = 15/317 (4%)
Query: 299 FDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVTIT 358
FDP ++++AVV PWYRNQDQPQYF VAEIC LSP S FP ++ TF+ YY KYG+TI
Sbjct: 1126 FDPQRFQDAVVMPWYRNQDQPQYFYVAEICPHLSPLSCFPGDNYRTFKHYYLVKYGLTIQ 1185
Query: 359 QSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCRAH 418
+ QPLLDVDHTSARLN LTPRYVNRKGVALP SSE T+RAKRE L+QKQ+L+PELC H
Sbjct: 1186 NTSQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVH 1245
Query: 419 PFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLG---IPHPHARPPPLDFGWSL 475
PF A LW V LPC LYRIN LL+A++IR+ V+ ++GLG I P LDFGWSL
Sbjct: 1246 PFPASLWRTAVCLPCILYRINGLLLADDIRKQVSADLGLGRQQIEDEDFEWPMLDFGWSL 1305
Query: 476 AEVLSADAXXXXXXXXXXXXXXXXXXXXXPGDDSAETNTXXXXXXXXXXXTKTINDILQE 535
+EVL ++E I I++
Sbjct: 1306 SEVLKKSRESKQKESLKDDTINGKDLADVEKKPTSEETQLDKDSKDDKVEKSAIELIIEG 1365
Query: 536 KE---DAENGFEIGTWSNEMASSI----PEDTDFDE--YLEPLPPNLTFCTSAS--GSAS 584
+E +A++ EIGTWSN+MA I ED D D+ +L LP N+ FC + GS +
Sbjct: 1366 EEKLQEADDFIEIGTWSNDMADDIASFNQEDDDEDDAFHLPVLPANVKFCDQQTRYGSPT 1425
Query: 585 WCDPIQKPKSEFNPTRS 601
+ D + +S F +S
Sbjct: 1426 FWD-VSNGESGFKGPKS 1441
Score = 201 bits (490), Expect = 1e-49
Identities = 91/118 (77%), Positives = 101/118 (85%)
Query: 850 FDFDFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPN 909
F FD QP L GHPGPSPS+ILQALTMSNANDGINLERLET+GDSFLK+AIT YLY + N
Sbjct: 1707 FSFDRQPDLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYEN 1766
Query: 910 VHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKL 967
VHEGKLSH+RSKQV+NLNLYRLGR K+LG MIA+KFEPHDNWLPPC+ P L+ L
Sbjct: 1767 VHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKAL 1824
Score = 120 bits (288), Expect = 3e-25
Identities = 72/149 (48%), Positives = 86/149 (57%), Gaps = 21/149 (14%)
Query: 970 NGQDKKQNVDSSPENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMS 1029
NGQ N S + CFIPYNL++QHSIPDKSIADCVEALIGAYL+ECGPRGALLFM+
Sbjct: 1871 NGQLDDSN--DSCNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMA 1928
Query: 1030 WLGIAVLPRHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKA 1089
WLG+ VLP EQR + P A V VYG
Sbjct: 1929 WLGVRVLP---ITRQLDGGNQEQRIPGSTKPNAEN---------------VVTVYGAWPT 1970
Query: 1090 PPSPLLRYVEDPEGELEKMLSG-KELEQS 1117
P SPLL + + EL+++LSG +E E+S
Sbjct: 1971 PRSPLLHFAPNATEELDQLLSGFEEFEES 1999
Score = 38.3 bits (85), Expect = 1.2
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 118 QVPAFPVYTRSGEVRVSLQHAPDADVRISPXXXXXXXXXXXXXXSEVLRVRRRGMRLQSE 177
++ AF ++TRSGEV+VSL+ A + V ++ + VLR+ ++ + L
Sbjct: 1018 KLSAFSIFTRSGEVKVSLELAKER-VILTSEQIVCINGFLNYTFTNVLRL-QKFLMLFDP 1075
Query: 178 GSTHNNYYVVPTIK 191
ST N ++VPT+K
Sbjct: 1076 DSTENCVFIVPTVK 1089
>UniRef50_UPI0000D5738B Cluster: PREDICTED: similar to CG4792-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG4792-PA
- Tribolium castaneum
Length = 1835
Score = 268 bits (658), Expect = 4e-70
Identities = 137/210 (65%), Positives = 154/210 (73%), Gaps = 21/210 (10%)
Query: 850 FDFDFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPN 909
F FD QP L HPGPSP+V+LQALTMSNANDGINLERLET+GDSFLK+AIT YLY + N
Sbjct: 1336 FKFDEQPNLVEHPGPSPNVLLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYEN 1395
Query: 910 VHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKL-- 967
VHEGKLSH+RSKQVSNLNLYRLGR K LG MIA+KF+PHDNWLPPC P L+ L
Sbjct: 1396 VHEGKLSHLRSKQVSNLNLYRLGRRKGLGEYMIATKFDPHDNWLPPCFYVPKELEEALID 1455
Query: 968 -----------------NLNGQDKKQNVDSSPENVGC--FIPYNLITQHSIPDKSIADCV 1008
++ D V E++ IPYNL+TQHSIPDKSIADCV
Sbjct: 1456 AQFPANCWTVADMAATRDMTLDDICSMVRQRGESLSLSNIIPYNLVTQHSIPDKSIADCV 1515
Query: 1009 EALIGAYLLECGPRGALLFMSWLGIAVLPR 1038
EALIGAYL+ECGPRGALLFM+WLGI VLP+
Sbjct: 1516 EALIGAYLIECGPRGALLFMAWLGIRVLPQ 1545
Score = 263 bits (644), Expect = 2e-68
Identities = 125/196 (63%), Positives = 150/196 (76%), Gaps = 5/196 (2%)
Query: 289 PLLKPGEV---FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATF 345
P + P EV + FDP+KY++AVV PWYRNQDQPQYF VAEIC L+P S FP + +ATF
Sbjct: 866 PEIIPEEVRKSYEFDPEKYRDAVVMPWYRNQDQPQYFYVAEICSNLNPASDFPGSDYATF 925
Query: 346 RDYYQNKYGVTITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLD 405
+YY KY + I Q LLDVDHTSARLN LTPRYVNRKGVALP SSE T+RAKRE+L+
Sbjct: 926 EEYYLRKYSIQIQNKSQHLLDVDHTSARLNFLTPRYVNRKGVALPTSSEATKRAKREKLE 985
Query: 406 QKQLLLPELCRAHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGIPH--PH 463
QKQ+L+PELC HPF+A LW V LPC LYRINALL+A++IRR+VA+E+ LG
Sbjct: 986 QKQILVPELCAIHPFSASLWRKAVCLPCILYRINALLLADQIRRTVALELNLGKIELDSE 1045
Query: 464 ARPPPLDFGWSLAEVL 479
+ PPL+FGWSLA+VL
Sbjct: 1046 FKWPPLNFGWSLADVL 1061
Score = 36.7 bits (81), Expect = 3.6
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 118 QVPAFPVYTRSGEVRVSLQHAPDADVRISPXXXXXXXXXXXXXXSEVLRVRRRGMRLQSE 177
++ AFP++TRSGEV V LQ + + ++ + VLR+++ + L +
Sbjct: 774 KISAFPIFTRSGEVSVDLQLC--SQLIVTENQICKIREFLNYTFTSVLRLQKY-LTLFNP 830
Query: 178 GSTHNNYYVVPTI 190
++ N+Y +VPTI
Sbjct: 831 DASANSYLIVPTI 843
>UniRef50_Q86MA9 Cluster: Dicer-1; n=5; Coelomata|Rep: Dicer-1 -
Anopheles gambiae (African malaria mosquito)
Length = 2259
Score = 261 bits (640), Expect = 7e-68
Identities = 140/290 (48%), Positives = 167/290 (57%), Gaps = 22/290 (7%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
+ FD K+++AVV PWYRN+DQPQYF VAEIC LSP S FP +++ATF +YY KY +
Sbjct: 1016 YTFDVGKFRDAVVMPWYRNRDQPQYFYVAEICNHLSPKSTFPGSNYATFEEYYHRKYKIH 1075
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
I +QPLLDVDHTSARLN LTPRYVNRKGVALP SSE T+RAKRE L+QKQ+L+PELC
Sbjct: 1076 IQNQRQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCT 1135
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLG------IPHPHARPPPLD 470
HPF A LW A V LPC LYRINALL+A+EIRR VA ++ LG + + P L
Sbjct: 1136 IHPFPASLWRAAVCLPCVLYRINALLLADEIRRQVARDLRLGWENVDELQEGQFQWPMLS 1195
Query: 471 FGWSLAEVLSADAXXXXXXXXXXXXXXXXXXXXXPGDDSAETNTXXXXXXXXXXXTKTIN 530
FGW+LA+VL D N K N
Sbjct: 1196 FGWNLADVLRKTKEQKIAQAQEAIDASAPEVEDEVELDKEAPNVRDAAEVDEEDGLKMEN 1255
Query: 531 DILQEKE----DAENG------------FEIGTWSNEMASSIPEDTDFDE 564
++ E E D E+ EIGTWSNEMA + D D E
Sbjct: 1256 GVIAEVEKSQVDGEDDTGDKKTDSDGTLLEIGTWSNEMAVGVGTDNDMGE 1305
Score = 206 bits (503), Expect = 3e-51
Identities = 93/126 (73%), Positives = 105/126 (83%)
Query: 842 DKGGQKREFDFDFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITA 901
D+ G F FD+QP L HPGPSP++ILQALTMSNANDGINLERLET+GDSFLK+AIT
Sbjct: 1640 DEAGGVDYFSFDYQPDLSQHPGPSPAIILQALTMSNANDGINLERLETIGDSFLKYAITT 1699
Query: 902 YLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPP 961
YLYC + NVHEGKLSH+RSKQVSNLNLYRLGR K+LG MIA+KFEPHDNWLPPC+ P
Sbjct: 1700 YLYCRYDNVHEGKLSHLRSKQVSNLNLYRLGRRKRLGDCMIAAKFEPHDNWLPPCYYVPK 1759
Query: 962 TLQPKL 967
L+ L
Sbjct: 1760 ELEQTL 1765
Score = 112 bits (269), Expect = 6e-23
Identities = 61/115 (53%), Positives = 75/115 (65%), Gaps = 11/115 (9%)
Query: 983 ENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLPRHLAA 1042
+N C+IPYNL+TQHSIPDKS+ADCVEALIGAYL+ECGPRGALLFM+WLGI VLP
Sbjct: 1852 DNGSCYIPYNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPP 1911
Query: 1043 LPHTHSTSEQRETSAEPPPAR-RRVGSLPPYRDRQGNWVQQVYGELKAPPSPLLR 1096
+ + ET+ P A + G L G + + YG APPSP++R
Sbjct: 1912 V----KLNSNNETALTPYKATGQNDGPL-----STGVTIAE-YGHWVAPPSPMVR 1956
Score = 48.8 bits (111), Expect = 8e-04
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 105 ANEVGTDSCRLSLQVPAFPVYTRSGEVRVSLQHAPDADVRISPXXXXXXXXXXXXXXSEV 164
A G + +L ++ +FP++TRSGEV+VSL P V++S ++V
Sbjct: 883 AQGFGILTTKLIPKISSFPIFTRSGEVKVSLDLCPQR-VKLSAHQLEMVNCFVKYTFTKV 941
Query: 165 LRVRRRGMRLQSEGSTHNNYYVVPTIK 191
LR+ ++ + L +T N +++VPT+K
Sbjct: 942 LRL-QKSLMLYDANATENCFFIVPTVK 967
>UniRef50_UPI00015B5D4A Cluster: PREDICTED: similar to dicer-1; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to dicer-1 -
Nasonia vitripennis
Length = 1917
Score = 259 bits (635), Expect = 3e-67
Identities = 121/185 (65%), Positives = 139/185 (75%), Gaps = 2/185 (1%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
FVF+ KY +AV+ PWYRNQDQPQYF VAEIC L+P S FP A ++TF +YY KYG+
Sbjct: 910 FVFEASKYHDAVIMPWYRNQDQPQYFYVAEICNHLNPKSSFPGADYSTFEEYYSKKYGIQ 969
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
I +QPLLDVDHTSARLN LTPRYVNRKGVALP SSE T+RAKRE L+QKQ+L+ ELC
Sbjct: 970 IQNLEQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILIAELCA 1029
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLG--IPHPHARPPPLDFGWS 474
HPF A LW V LPC LYRINALL+A++IRR VA + LG PPLDFGWS
Sbjct: 1030 IHPFPASLWRQAVCLPCILYRINALLLADQIRRHVAQSISLGQETLDEDFNWPPLDFGWS 1089
Query: 475 LAEVL 479
LA+VL
Sbjct: 1090 LADVL 1094
Score = 207 bits (505), Expect = 2e-51
Identities = 93/125 (74%), Positives = 105/125 (84%)
Query: 847 KREFDFDFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCA 906
K F FD+QP L+GH GPSPS+ILQALTMSNANDGINLERLET+GDSFLK+AIT YL+C
Sbjct: 1357 KGSFSFDYQPELDGHSGPSPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLFCT 1416
Query: 907 HPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPK 966
+ N+HEGKLSH+RSKQVSNLNLYRLGR K LG MIASKFEPHDNWLPPC+ P L+
Sbjct: 1417 YNNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIASKFEPHDNWLPPCYYVPKELEQA 1476
Query: 967 LNLNG 971
L +G
Sbjct: 1477 LIESG 1481
Score = 128 bits (309), Expect = 8e-28
Identities = 76/135 (56%), Positives = 86/135 (63%), Gaps = 17/135 (12%)
Query: 988 FIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLPRHLAALPHTH 1047
FIPYNLITQHSIPDKSIADCVEALIGAYL+ CGPRGALLFMSWLGI VLP
Sbjct: 1541 FIPYNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMSWLGIHVLP---------- 1590
Query: 1048 STSEQRETSAEPPPARRRVGSLPPYR-DRQG---NWVQQVYGELKAPPSPLLRYVEDPEG 1103
+E+ T ++ P R GS P +G W Q Y +L+ PPSPL V PE
Sbjct: 1591 --TEEVVTISDSKPTDRLPGSTPYVELGEEGGSTKWTQLRYKKLQEPPSPLFYNVPQPEI 1648
Query: 1104 ELEKMLSGKE-LEQS 1117
ELE ML G + LE+S
Sbjct: 1649 ELEIMLDGYDSLERS 1663
Score = 36.3 bits (80), Expect = 4.7
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 118 QVPAFPVYTRSGEVRVSLQHAPDADVRISPXXXXXXXXXXXXXXSEVLRVRRRGMRLQSE 177
+V FP+YTRSGEVRV L+ + + V + + VLR+++ + L
Sbjct: 803 KVCPFPIYTRSGEVRVDLKLSKET-VVLDESKIDKVVSFLNYTFTNVLRLQKY-LMLFDP 860
Query: 178 GSTHNNYYVVPTIK 191
+ N+Y +VP K
Sbjct: 861 NVSENSYIIVPVKK 874
>UniRef50_UPI0000DB7B4D Cluster: PREDICTED: similar to Dicer-1
CG4792-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to
Dicer-1 CG4792-PA - Apis mellifera
Length = 1838
Score = 245 bits (600), Expect = 5e-63
Identities = 117/185 (63%), Positives = 134/185 (72%), Gaps = 2/185 (1%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
F FD KY +AV+ PWYR+QDQPQYF VAEIC L+P S FP + TF +YY KY +
Sbjct: 888 FKFDASKYHDAVIMPWYRSQDQPQYFYVAEICTNLNPKSSFPGNDYGTFEEYYLKKYDIQ 947
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
I QPLLDVDHTSARLN LTPRYVNRKGVALP SSE T+RAKRE L+QKQ+L+ ELC
Sbjct: 948 IQNLDQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVAELCA 1007
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGIPHPHA--RPPPLDFGWS 474
HPF A LW V LPC LYRINALL+A +IR VA + LG + ++ P LDFGWS
Sbjct: 1008 IHPFPASLWRQAVCLPCILYRINALLLANQIRCQVAQMINLGQENLNSDFEWPALDFGWS 1067
Query: 475 LAEVL 479
LAEVL
Sbjct: 1068 LAEVL 1072
Score = 209 bits (510), Expect = 4e-52
Identities = 93/122 (76%), Positives = 105/122 (86%)
Query: 850 FDFDFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPN 909
++FDFQP LE HPGPSPS+ILQALTMSNANDGINLERLET+GDSFLK+AIT YLYC + N
Sbjct: 1287 YNFDFQPKLENHPGPSPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDN 1346
Query: 910 VHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNL 969
+HEGKLSH+RSKQVSNLNLYRLGR K LG MIA+KFEPHDNWLPPC+ P L+ L
Sbjct: 1347 IHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIE 1406
Query: 970 NG 971
+G
Sbjct: 1407 SG 1408
Score = 142 bits (343), Expect = 6e-32
Identities = 82/162 (50%), Positives = 104/162 (64%), Gaps = 20/162 (12%)
Query: 964 QPKLNLNGQDKKQNVDSSP---ENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECG 1020
+ KL + + +N + P +N+ CFIPYNLITQHSIPDKSIADCVEALIGAYL+ CG
Sbjct: 1438 EQKLGVMKNELDRNETTLPNNLDNMRCFIPYNLITQHSIPDKSIADCVEALIGAYLIACG 1497
Query: 1021 PRGALLFMSWLGIAVLPRHLAALPHTHSTSEQRETSAEPPPARRRVGSLP--PYRDRQGN 1078
PRGALLFM+WLGI VLP +E+ E P R GS P ++ +G
Sbjct: 1498 PRGALLFMAWLGIHVLP------------TEEINIIQETEPKDRIPGSTPFVKGKNEKGE 1545
Query: 1079 --WVQQVYGELKAPPSPLLRYVEDPEGELEKMLSG-KELEQS 1117
W Q YG+L+ P +PLLRY+ DPE EL+ ML G +ELE++
Sbjct: 1546 TIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKN 1587
>UniRef50_Q4SZJ8 Cluster: Chromosome undetermined SCAF11600, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF11600, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1479
Score = 196 bits (479), Expect = 2e-48
Identities = 96/180 (53%), Positives = 121/180 (67%), Gaps = 4/180 (2%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
F F + Y++AV+ P YRN DQP F VA++ L+P S FPS + TF +YY+ KY +
Sbjct: 993 FSFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLD 1052
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
+T QPLLDVDHTS+RLNLLTPR++N+KG ALP+SS R+AK E L KQ+L+PELC
Sbjct: 1053 LTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCA 1112
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLG---IPHPHARPPPLDFGW 473
HP A LW V LP LYR++ LL AEE+R A E G+G +P P R P LDFGW
Sbjct: 1113 IHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATEAGVGARTLP-PDFRYPNLDFGW 1171
Score = 144 bits (348), Expect = 2e-32
Identities = 64/93 (68%), Positives = 78/93 (83%)
Query: 863 GPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
GP+P +ILQALT+SNA+DG NLERLE +GDSFLK AIT YL+C +P+ HEG+LS+MRSK+
Sbjct: 1346 GPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK 1405
Query: 923 VSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPP 955
VSN NLYRLG+ K L SRM+ S F+P NWLPP
Sbjct: 1406 VSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPP 1438
>UniRef50_Q9UPY3 Cluster: Endoribonuclease Dicer; n=50; Eumetazoa|Rep:
Endoribonuclease Dicer - Homo sapiens (Human)
Length = 1912
Score = 196 bits (479), Expect = 2e-48
Identities = 95/179 (53%), Positives = 121/179 (67%), Gaps = 2/179 (1%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
FVF + Y++AV+ P YRN DQP F VA++ L+P S FPS + TF +YY+ KY +
Sbjct: 910 FVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLD 969
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
+T QPLLDVDHTS+RLNLLTPR++N+KG ALP+SS R+AK E L KQ+L+PELC
Sbjct: 970 LTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCA 1029
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGIPHPHA--RPPPLDFGW 473
HP A LW V LP LYR++ LL AEE+R A + G+G+ A R P LDFGW
Sbjct: 1030 IHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGW 1088
Score = 144 bits (348), Expect = 2e-32
Identities = 64/93 (68%), Positives = 78/93 (83%)
Query: 863 GPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
GP+P +ILQALT+SNA+DG NLERLE +GDSFLK AIT YL+C +P+ HEG+LS+MRSK+
Sbjct: 1281 GPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK 1340
Query: 923 VSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPP 955
VSN NLYRLG+ K L SRM+ S F+P NWLPP
Sbjct: 1341 VSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPP 1373
Score = 72.1 bits (169), Expect = 8e-11
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 929 YRLGRNKQLGSRMIASKFEPHD--NWLPPCHEPPPTLQPKLNL-----NGQDKKQNVDSS 981
+++ + LGS +S FE D +W C+ P + + N ++ VD+
Sbjct: 1471 WKMPKKSSLGSMPFSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTG 1530
Query: 982 PENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLP---- 1037
+++ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LG+ VLP
Sbjct: 1531 KQSIS----YDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKR 1586
Query: 1038 --RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAPPSPLL 1095
R A P T ++ + A V S R YG LK PP +
Sbjct: 1587 TDREKALCP-TRENFNSQQKNLSVSCAAASVAS-----SRSSVLKDSEYGCLKIPPRCMF 1640
Query: 1096 RYVEDPEGELEKMLSGKE 1113
+ D + L ++SG E
Sbjct: 1641 DH-PDADKTLNHLISGFE 1657
>UniRef50_UPI0000586635 Cluster: PREDICTED: similar to Dicer protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Dicer protein - Strongylocentrotus purpuratus
Length = 1850
Score = 177 bits (432), Expect = 1e-42
Identities = 93/179 (51%), Positives = 116/179 (64%), Gaps = 5/179 (2%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
F F D +AVVTP YRN DQPQ + +A+I + L S FPS + TF DYY +Y +
Sbjct: 998 FEFSTDILADAVVTPIYRNIDQPQRYFMADILYDLPVTSPFPSEKYETFVDYYFERYDIQ 1057
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
I+ +QPL+DVD S+RLNLLTPRY+N KG ALP+S T + K+ L +KQ L+PELC
Sbjct: 1058 ISNFQQPLVDVDCMSSRLNLLTPRYLNHKGKALPIS---TGQNKKGNLQKKQYLVPELCY 1114
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGIPH-PHARP-PPLDFGW 473
+P A LW V LP LYR+NALLIAEE+R VA E G+G+ P P P L FGW
Sbjct: 1115 IYPIPASLWRKAVCLPSILYRLNALLIAEELRVQVAEEAGIGLKTLPQEYPYPNLSFGW 1173
Score = 140 bits (338), Expect = 3e-31
Identities = 63/94 (67%), Positives = 76/94 (80%)
Query: 863 GPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
GPSP++ILQ+LTMSN++DG NLERLE +GDSFLK A+TAYLYC +P++ EGKLS +RSKQ
Sbjct: 1287 GPSPTIILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQ 1346
Query: 923 VSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPC 956
VSN NLY LG K L +M S F+P NWLPPC
Sbjct: 1347 VSNFNLYCLGDKKALAHKMQVSLFDPSINWLPPC 1380
Score = 88.6 bits (210), Expect = 8e-16
Identities = 62/147 (42%), Positives = 77/147 (52%), Gaps = 26/147 (17%)
Query: 965 PKLNLNGQDKKQNVDSSPENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGA 1024
P L G K Q++ S P+ +PY + TQHS+ DKSIADCVEALIG YL+ CG R A
Sbjct: 1475 PGLTYTGA-KTQDLGSVPQ-----LPYEIHTQHSMSDKSIADCVEALIGCYLVSCGFRSA 1528
Query: 1025 LLFMSWLGIAVLPRHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVY 1084
LL M+W+G+ VLP S +R + PA LP V +Y
Sbjct: 1529 LLIMAWMGLDVLPT-------IDGQSNKRNDQSSDLPA----ADLP---------VSCLY 1568
Query: 1085 GELKAPPSPLLRYVEDPEGELEKMLSG 1111
G LK P SPLLR V + E L+ L G
Sbjct: 1569 GYLKQPESPLLRSVPNAEDVLQHQLVG 1595
Score = 47.2 bits (107), Expect = 0.003
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 118 QVPAFPVYTRSGEVRVSLQHAPDADVRISPXXXXXXXXXXXXXXSEVLRVRRRGMRLQSE 177
+VP FPVYTR+GE+ VS+ D ++R+S SEVLR+ + + L E
Sbjct: 889 KVPGFPVYTRAGELAVSIMLESD-EIRLSSSQIRRAQSFHGCMFSEVLRLDKPNLELNPE 947
Query: 178 GSTHNNYYVVP 188
S NY +VP
Sbjct: 948 KS-QANYLIVP 957
Score = 40.7 bits (91), Expect = 0.22
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 869 ILQALTMSNAN-DGIN--LERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+LQA T S+ + + I +RLE +GD+ L + IT +LY H N+ G L+ +RS V+N
Sbjct: 1613 LLQAFTHSSYHRNSITDCYQRLEFLGDALLDYLITRHLYDHHTNLSPGALTDLRSALVNN 1672
>UniRef50_P34529 Cluster: Endoribonuclease dcr-1; n=2;
Caenorhabditis|Rep: Endoribonuclease dcr-1 -
Caenorhabditis elegans
Length = 1845
Score = 128 bits (309), Expect = 8e-28
Identities = 67/171 (39%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
+ F+ + YK+A+V PWYRN +QP ++ VAEI P S FP TF +Y+ KY +
Sbjct: 803 YKFNAEDYKDAIVMPWYRNLEQPVFYYVAEILPEWRPSSKFPDTHFETFNEYFIKKYKLE 862
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKR-------------ER 403
I Q LLDVD TS RLNLL PR N+ + VS+ T +
Sbjct: 863 IYDQNQSLLDVDFTSTRLNLLQPRIQNQPRRSRTVSNSSTSNIPQASASDSKESNTSVPH 922
Query: 404 LDQKQLLLPELCRAHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVE 454
Q+Q+L+PEL HP +A LW ALP YR+N LL+ +E+R ++ V+
Sbjct: 923 SSQRQILVPELMDIHPISATLWNVIAALPSIFYRVNQLLLTDELRETILVK 973
Score = 126 bits (304), Expect = 3e-27
Identities = 61/115 (53%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 863 GPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
G SP ++L ALT SNA DG++LER ET+GDSFLKFA T YLY + HEGKLS RSK+
Sbjct: 1326 GVSPCLLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLLDQHEGKLSFARSKE 1385
Query: 923 VSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQN 977
VSN NLYRLG+ + ++A+KF+ HD+WLPPC+ P + N + ++K N
Sbjct: 1386 VSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYIPTCDFKAP-NTDDAEEKDN 1439
Score = 64.1 bits (149), Expect = 2e-08
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 989 IPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLPR 1038
+PYNL+TQ I DKSIAD VEALIG +LL GP L M+W+G+ V+ +
Sbjct: 1493 LPYNLLTQQHISDKSIADAVEALIGVHLLTLGPNPTLKVMNWMGLKVIQK 1542
>UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG6493-PA
- Tribolium castaneum
Length = 1623
Score = 117 bits (282), Expect = 2e-24
Identities = 78/209 (37%), Positives = 107/209 (51%), Gaps = 27/209 (12%)
Query: 864 PSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQV 923
P+ I QALT + AND +NLERLET+GDSFLKF + Y+ P +EGK + ++ K V
Sbjct: 1141 PNLCQIYQALTAAEANDIVNLERLETLGDSFLKFVASLYIIFKFPTYNEGKSTTLKGKLV 1200
Query: 924 SNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPT-------------------LQ 964
SN NLY LG K LG + S P D W+PPC P T +
Sbjct: 1201 SNKNLYYLGVRKNLGGILKNSDLSPSD-WVPPCFCIPQTISKAIGNKEYSVVSLFNCCIS 1259
Query: 965 PKLNLNGQ-DKKQNVDSSPENVGCFIPYN------LITQHSIPDKSIADCVEALIGAYLL 1017
P+ ++G ++K D + E + + + + + DKSIAD VEAL+GAY L
Sbjct: 1260 PEEQVSGNLNRKTLSDMTTEEIAPDEENSYGNMCNFLNKQYVGDKSIADSVEALLGAYFL 1319
Query: 1018 ECGPRGALLFMSWLGIAVLPRHLAALPHT 1046
G +G + FM W+GI L + L T
Sbjct: 1320 SGGIQGGIKFMEWIGILPLSEQIQRLIET 1348
Score = 72.9 bits (171), Expect = 4e-11
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 302 DKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVTITQSK 361
+ Y +V+PWYR+ P+ ++V ++C S S FP+ + F YY K+ ++I
Sbjct: 854 ETYLHKIVSPWYRSP--PKMYVVTKVCPDKSALSRFPNHEYPNFVSYYSEKHSLSILDPS 911
Query: 362 QPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCRAHPFA 421
QPLL V S RLN PR K R + E L+ + L+PEL F
Sbjct: 912 QPLLLVKGLSERLNAFKPRGAGGK---------RKKEKMYEELE--EYLIPELVIKQEFP 960
Query: 422 APLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGIPHPHARPP 467
+ LW LP L R+ LL ++++ +A +G + PP
Sbjct: 961 SCLWIQARFLPSILSRLAYLLKLQQLQVDIARGIGAKAEYLKDCPP 1006
Score = 41.1 bits (92), Expect = 0.17
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 860 GHPGPSPSVILQALTMSNANDG---INLERLETVGDSFLKFAITAYLY--CAHPNVHEGK 914
G+ + + +LQALT S+ + ++ ERLE +GD+ L F IT Y++ C H + G+
Sbjct: 1379 GYTFTNRAFLLQALTHSSYSPNRITLSYERLEFLGDAVLDFLITCYIFEHCGH--LEPGQ 1436
Query: 915 LSHMRSKQVSN 925
++ +RS V+N
Sbjct: 1437 VTDLRSSLVNN 1447
>UniRef50_UPI00015B633C Cluster: PREDICTED: similar to dicer-1; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to dicer-1 -
Nasonia vitripennis
Length = 1563
Score = 109 bits (263), Expect = 3e-22
Identities = 76/217 (35%), Positives = 107/217 (49%), Gaps = 30/217 (13%)
Query: 863 GPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
GPSP ILQ+LT ND NLER+ET+GDSFLKFAI+ +LY A+P EG L+H++ K
Sbjct: 1130 GPSPVDILQSLTTKVKNDVFNLERVETLGDSFLKFAISLFLYQAYPTCGEGPLTHLKGKL 1189
Query: 923 VSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQ-----PKLNLN------- 970
V NLNL+ + K + RM F P N++ P + LQ K++ N
Sbjct: 1190 VGNLNLFYCSKQKNIAGRMHVEDFAPTGNFVTPAYAAHQVLQQILRAEKVSANILYEIRV 1249
Query: 971 -------GQDKKQNVDSSPENVGCFIPYNLIT----QHSIPDKSIAD-----CVEALIGA 1014
G D + V + +T +H + + ++D C EALIG
Sbjct: 1250 PAAERFSGCISNNTTDMMQDKVLAWPSDEKVTHTGMEHFLGIQVVSDKSVSDCTEALIGT 1309
Query: 1015 YLLECGPRGALLFMSWLGIAVLPRHLAALPHTHSTSE 1051
YLL G +GAL + W +LP+ L + +S E
Sbjct: 1310 YLLHLGIKGALQILKW--FEILPKSLNVDQYLYSEVE 1344
Score = 86.6 bits (205), Expect = 3e-15
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 291 LKPGEVFVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQ 350
+ P E V +Y A+VTP YR + ++V ++C L +S FP++ + ++ Y++
Sbjct: 837 ISPSENLVVKESEYDLALVTPNYRASNM---YIVTQVCEYLKAESSFPTSDYNSYVHYFK 893
Query: 351 NKYGVTITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLL 410
++ + I QP+L+V S+++N PR + S+R R + E D ++ L
Sbjct: 894 ERHYIEIKNPAQPMLEVKPISSKINCTKPRSIKAN------LSKRKRASLTE--DFEEHL 945
Query: 411 LPELCRAHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGI 459
+PELC F + W LP L+RI+ L+ AEE+R +A E L I
Sbjct: 946 VPELCDRIDFPSLYWLKATTLPSILHRISQLIAAEELRVKIAHEAQLHI 994
Score = 37.5 bits (83), Expect = 2.0
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 860 GHPGPSPSVILQALT----MSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKL 915
G+ + + +LQA T M N + +RLE +GD+ L F +T ++Y N+ G+L
Sbjct: 1368 GYKFRNRAFLLQAFTHPSYMPNRQTA-SYQRLEFLGDAVLDFLLTIHIYETCGNLSPGEL 1426
Query: 916 SHMRSKQVSNLNLYRLGRNKQLGSRMIA 943
+ +RS V+N+ L L + ++A
Sbjct: 1427 TDLRSALVNNITFACLAVRYGLHTALLA 1454
>UniRef50_A7P4V9 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1593
Score = 99 bits (238), Expect = 3e-19
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 865 SPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVS 924
S S+IL+A+T ++ ++ERLE +GDS LK+A++ +L+ +P HEG+LS RS V
Sbjct: 997 SSSLILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVC 1056
Query: 925 NLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPEN 984
N L++LG ++ L + F+P W+ P + ++ + + E+
Sbjct: 1057 NSTLHKLGTDRSLQGYIRDGAFDPR-RWVAPGQRSIRPVPCSCGVDALEVPLDGKFQTED 1115
Query: 985 VGCFIPYNLITQHS-IPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
+ + H + K+IADCVEALIGAY + G AL M W GI V
Sbjct: 1116 TKIVVGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDV 1167
Score = 50.0 bits (114), Expect = 4e-04
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 339 SASHATFRDYYQNKYGVTITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRR 398
S+++ TF +Y+ NKYG+ + QPLL + + NLL + + G AL + ++
Sbjct: 881 SSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLV-NFNDEGGEAL----QTGQK 935
Query: 399 AKRERLDQKQLLLPELCRAHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVG 456
E+ + PEL + + ++ LP ++R+ +L++A ++R +A G
Sbjct: 936 MLNEKAQTHVHMPPELLVSIEVPITVLKSSYLLPSLIHRLESLMLASQLREEIAFTTG 993
Score = 42.3 bits (95), Expect = 0.072
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 868 VILQALTMSNAND---GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVS 924
++L+A+T + + G +RLE +GDS L IT +LY +H ++ G+L+ +RS V+
Sbjct: 1209 LLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVN 1268
Query: 925 NLNLYRLGRNKQL 937
N + ++ + L
Sbjct: 1269 NESFAQVAVRRNL 1281
>UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|Rep:
Dicer-like 4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1702
Score = 97.9 bits (233), Expect = 1e-18
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 19/282 (6%)
Query: 757 YGTRELRHADDGRLTLQSVERNKRFILNHLKTNLKPEEIKSLFCFSMKDIDIDAPDYVDE 816
YG EL+H L ++ + + + N ++TNL+P+E+ F I+I P+
Sbjct: 1001 YGV-ELKHPAQPLLRVKPLCHVRNLLHNRMQTNLEPQELDEYF------IEIP-PELSHL 1052
Query: 817 KITNIGFDDGDKYNTGNEFKPYYEDDKGGQKREFDFDFQPVLEGHPGPSPSVILQALTMS 876
KI + D G + E+ E + S +L+ALT
Sbjct: 1053 KIKGLSKDIGSSLSLLPSIMHRMENLLVAI--ELKHVLSASIPEIAEVSGHRVLEALTTE 1110
Query: 877 NANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQ 936
++ ++LERLE +GD+FLKFA++ +L+ H ++ EG+L+ RS V+N NL RL K
Sbjct: 1111 KCHERLSLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKN 1170
Query: 937 LGSRMIASKFEPHDNWL--PPCHEPPPTLQPKLNLNGQDKKQNV-DSSPENVGCFIPYNL 993
L + +P + PC + K ++ ++ + +S+ + C +
Sbjct: 1171 LQVYIRDQALDPTQFFAFGHPCRVTCDEVASK-EVHSLNRDLGILESNTGEIRCSKGH-- 1227
Query: 994 ITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
H + K+IAD VEAL+GA+L++ G +GA+ F+ W+G+ V
Sbjct: 1228 ---HWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIGVNV 1266
Score = 39.1 bits (87), Expect = 0.67
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 877 NANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
N + G +RLE +GD+ L + +T+Y + P + G+L+ +RS V+N
Sbjct: 1319 NRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNN 1367
>UniRef50_Q2HTA7 Cluster: Helicase, C-terminal; Argonaute and Dicer
protein, PAZ; Ribonuclease III, bacterial; n=1; Medicago
truncatula|Rep: Helicase, C-terminal; Argonaute and Dicer
protein, PAZ; Ribonuclease III, bacterial - Medicago
truncatula (Barrel medic)
Length = 1939
Score = 96.3 bits (229), Expect = 4e-18
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 869 ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
IL+ALT ++ + ER E +GD++LK+ ++ +L+ HP HEG+L+ MR + VSN+ L
Sbjct: 1399 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVL 1458
Query: 929 YRLGRNKQLGSRMIASKFEPHDNWLPPCHEP---PPTLQPKLNLNGQD----KKQNVDSS 981
YR +K L S ++A +F P W P P T + +L Q+ K + +D++
Sbjct: 1459 YRYALSKGLQSYILADRFAP-SRWAAPGVLPVFDEDTKDEESSLFDQERSIFKAERMDNT 1517
Query: 982 PENVGCFIPYNLITQHS----IPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
E L + S + K++AD VEALIG Y +E G A M W+GI +
Sbjct: 1518 DEFEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHI 1575
Score = 43.2 bits (97), Expect = 0.041
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 352 KYGVTITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLL 411
+YGV + +QPL+ S NLL+PR+ + +G + T + L
Sbjct: 1292 RYGVDLAYKQQPLIRGRGVSYCKNLLSPRFEHSEG-----HEDETEETHDKTY--YVFLP 1344
Query: 412 PELCRAHPFAAPLWAATVALPCALYRINALLIAEEIRRSV 451
PELC HP L LP + R+ ++L+A +++ +
Sbjct: 1345 PELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKNMI 1384
Score = 39.9 bits (89), Expect = 0.38
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 848 REFDFDFQPVLEGHPGPSPSVILQALT-MSNANDGINL-ERLETVGDSFLKFAITAYLYC 905
R DFD ++++++T S + G++ +RLE VGD+ L IT +L+
Sbjct: 1597 RSVDFDALEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFF 1656
Query: 906 AHPNVHEGKLSHMRSKQVSNLNLYRL 931
++ ++ G+L+ +R+ V+N N R+
Sbjct: 1657 SYTDLPPGRLTDLRAAAVNNENFARV 1682
>UniRef50_Q174T8 Cluster: Dicer-1; n=3; Culicidae|Rep: Dicer-1 - Aedes
aegypti (Yellowfever mosquito)
Length = 1658
Score = 95.1 bits (226), Expect = 1e-17
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 12/165 (7%)
Query: 299 FDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVTIT 358
F+ DKY+ V+ PWY+N + Y +V + L+P+S FP+ + ++ +Y+ Y + +
Sbjct: 856 FEADKYRHKVILPWYKNNKEQPY-VVTMVHEHLTPESPFPNPEYGSYANYFSQAYHLAVV 914
Query: 359 QSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCRAH 418
+ Q L++V ++ LN L P GV ++ R+K R ++ +L+PELC +
Sbjct: 915 KPDQFLIEVKGITSYLNRLNP------GVE---DDGKSTRSKHWRFNE--ILIPELCHNY 963
Query: 419 PFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGIPHPH 463
F A W LP AL+R++ LL+AE IR +A +G H
Sbjct: 964 QFPADYWLKATLLPSALHRLHYLLLAENIRVDLATGANVGCLENH 1008
Score = 71.7 bits (168), Expect = 1e-10
Identities = 36/96 (37%), Positives = 56/96 (58%)
Query: 869 ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
I++ALT +++D +LER E +GD+FLKF+I+ YL H HEG L+ ++ + VSN NL
Sbjct: 1175 IIKALTTKSSSDVFDLERYELLGDAFLKFSISLYLVKYHKEWHEGFLTAVKGQIVSNRNL 1234
Query: 929 YRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQ 964
L + KF+P ++W PP P ++
Sbjct: 1235 VYCAIKYGLPGMLKIHKFDPKNDWQPPLATVPKNIK 1270
Score = 39.5 bits (88), Expect = 0.51
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 860 GHPGPSPSVILQALT-MSNANDGI--NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLS 916
G+ + +LQALT S + I + ++LE +GD+ L F I+ Y++ +P + G+L+
Sbjct: 1409 GYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQLT 1468
Query: 917 HMRSKQVSNLNL 928
+RS V+N+ L
Sbjct: 1469 DLRSALVNNVTL 1480
>UniRef50_Q9LXW7 Cluster: Putative uncharacterized protein T15B3_60;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein T15B3_60 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1531
Score = 94.7 bits (225), Expect = 1e-17
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 865 SPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVS 924
S + IL+A+T + ++ERLE +GDS LK+ + +L+ +P+ EG+LS R +S
Sbjct: 953 SSTSILEAVTTLTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIIS 1012
Query: 925 NLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPEN 984
N NL+RL +++L + FEP W P + K ++ ++ + EN
Sbjct: 1013 NSNLHRLTTSRKLQGYIRNGAFEPR-RWTAPGQFSLFPVPCKCGIDTREVPLDPKFFTEN 1071
Query: 985 VGCFIPYNLITQHS-IPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
+ I + H + KS++DC EALIGAY + G +L M WLGI V
Sbjct: 1072 MTIKIGKSCDMGHRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDV 1123
Score = 48.0 bits (109), Expect = 0.001
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 331 LSPDSVFPSASHATFRDYYQNKYGVTITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALP 390
+SP V S+ +AT+ +Y+ KYG+ + QPL+ + + NLL N + V
Sbjct: 827 MSPFEVDASSGYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVD--FNEEMVV-- 882
Query: 391 VSSERTRRAKRERLDQKQLLLPELCRAHPFAAPLWAATVALPCALYRINALLIAEEIRRS 450
+ + ++ + + L PEL + + LP ++R+ +L++A ++R
Sbjct: 883 KTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREE 942
Query: 451 V 451
+
Sbjct: 943 I 943
Score = 45.6 bits (103), Expect = 0.008
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 861 HPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRS 920
H + ++ +A+T S+ + + ERLE +GDS L F IT +L+ + G+++ +RS
Sbjct: 1158 HEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRS 1217
Query: 921 KQVSNLNLYRLGRNKQLGSRM 941
V+N N ++ L + +
Sbjct: 1218 ACVNNENFAQVAVKNNLHTHL 1238
>UniRef50_UPI0000DB7B59 Cluster: PREDICTED: similar to Dicer-1
CG4792-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to
Dicer-1 CG4792-PA - Apis mellifera
Length = 1040
Score = 93.9 bits (223), Expect = 2e-17
Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 26/188 (13%)
Query: 872 ALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRL 931
ALT ND NLERLET+GDS+LKF I+ +LY P EG L+ ++ K + N NLY
Sbjct: 612 ALTTKLGNDAFNLERLETLGDSYLKFIISLFLYNQFPKYGEGSLTMIKGKIIGNRNLYYC 671
Query: 932 GRNKQLGSRMIASKFEPHDNWLPPCH-------------EPPPTLQPKLNLNGQDKKQN- 977
G K++ RM F P N++ P + E PT+ ++ + Q++
Sbjct: 672 GIKKKIPGRMKVDSFIPLSNFIAPAYTVFRQLQNILLEAEVSPTVLYEIQIPQQEQFSGL 731
Query: 978 VDSSPENV--GCFIPYNLI-----TQH-----SIPDKSIADCVEALIGAYLLECGPRGAL 1025
+ S +N+ + + L +H ++ DK++ADCVEALIG YL G + L
Sbjct: 732 ISESTKNIIQQKVLNWELAELQTGMEHYLGIQTVSDKAVADCVEALIGVYLRNMGIKDTL 791
Query: 1026 LFMSWLGI 1033
+ W I
Sbjct: 792 TLLKWFQI 799
Score = 53.6 bits (123), Expect = 3e-05
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 337 FPSASHATFRDYYQNKYGVTITQSKQPLLDVDHTSARLNLLTPRYVNRKGVAL------P 390
FPSA ++ F QN + I + P + H R + N G + P
Sbjct: 479 FPSALYSAF-PLSQNTVYLHILHAT-PKYPIPHDDNRYLVFYNLLCNSAGFGILSAKQMP 536
Query: 391 VSSERTRRAKRERLDQKQLLLPELCRAHPFAAPLWAATVALPCALYRINALLIAEEIRRS 450
+ + RR + K+ L+PELC F A W LP L+RI+ LLIAE++R +
Sbjct: 537 QNESKNRRYVDLPKNMKEHLVPELCIKINFPALYWLKATILPSILHRISQLLIAEDLRYT 596
Query: 451 VAVEVGLGI 459
+A E LG+
Sbjct: 597 IAKETNLGL 605
Score = 40.3 bits (90), Expect = 0.29
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 860 GHPGPSPSVILQALTMSN--ANDGINL-ERLETVGDSFLKFAITAYLYCAHPNVHEGKLS 916
G+ + +LQA T + AN+ +RLE +GD+ L F IT+Y+Y N++ G L+
Sbjct: 816 GYKFKNRGYLLQAFTHPSYSANNMTECYQRLEFLGDAILDFLITSYIYENCGNLNPGSLT 875
Query: 917 HMRSKQVSNL 926
+RS V+N+
Sbjct: 876 DLRSALVNNI 885
>UniRef50_Q01HF5 Cluster: OSIGBa0157K09-H0214G12.2 protein; n=4; Oryza
sativa|Rep: OSIGBa0157K09-H0214G12.2 protein - Oryza
sativa (Rice)
Length = 1604
Score = 92.3 bits (219), Expect = 7e-17
Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 865 SPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVS 924
S S IL+ALT + I+LER E +GD+FLK+ + + + + + EG+L+ RS V+
Sbjct: 970 SASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVN 1029
Query: 925 NLNLYRLGRNKQLGSRMIASKFEPHDNWLP--PCHEPPPTLQPKLNLNGQDKKQNVDSSP 982
N +LY L K+L + +FEP + P PC + N + + + +D P
Sbjct: 1030 NSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPC-------KVVCNTDVEVRLHQMDIHP 1082
Query: 983 EN-VGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
+N C + + H + K IAD VE+LIGA+L+E G + A F+ W+GI V
Sbjct: 1083 DNRENCNLRCTR-SHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDV 1135
Score = 46.4 bits (105), Expect = 0.004
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 858 LEGHPGPSPSVILQALTMSN--ANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKL 915
L G+ ++LQA + + G +RLE +GD+ L++ IT+YLY +P++ G++
Sbjct: 1167 LIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQI 1226
Query: 916 SHMRSKQVSNLNLYRLGRNKQLGSRMI 942
+ +RS V N +L K + +I
Sbjct: 1227 TDLRSLAVGNDSLAYAAVEKSIHKHLI 1253
Score = 41.1 bits (92), Expect = 0.17
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 341 SHATFRDYYQNKYGVTITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAK 400
S AT+ ++++ ++ + ++ +QPLL NLL R LP E T
Sbjct: 858 SGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNR--------LP---ETTESEG 906
Query: 401 RERLDQKQLLLPELC--RAHPFAAPLWAATVALPCALYRINALLIAEEIR 448
RE L+ L PELC + F+ + ++ LP +YR+ LL+A E++
Sbjct: 907 RELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELK 956
>UniRef50_A7LFZ6 Cluster: Dicer-like protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Dicer-like protein - Oryza
sativa subsp. japonica (Rice)
Length = 1657
Score = 92.3 bits (219), Expect = 7e-17
Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 865 SPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVS 924
S S IL+ALT + I+LER E +GD+FLK+ + + + + + EG+L+ RS V+
Sbjct: 1023 SASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVN 1082
Query: 925 NLNLYRLGRNKQLGSRMIASKFEPHDNWLP--PCHEPPPTLQPKLNLNGQDKKQNVDSSP 982
N +LY L K+L + +FEP + P PC + N + + + +D P
Sbjct: 1083 NSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPC-------KVVCNTDVEVRLHQMDIHP 1135
Query: 983 EN-VGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
+N C + + H + K IAD VE+LIGA+L+E G + A F+ W+GI V
Sbjct: 1136 DNRENCNLRCTR-SHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDV 1188
Score = 46.4 bits (105), Expect = 0.004
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 858 LEGHPGPSPSVILQALTMSN--ANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKL 915
L G+ ++LQA + + G +RLE +GD+ L++ IT+YLY +P++ G++
Sbjct: 1220 LIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQI 1279
Query: 916 SHMRSKQVSNLNLYRLGRNKQLGSRMI 942
+ +RS V N +L K + +I
Sbjct: 1280 TDLRSLAVGNDSLAYAAVEKSIHKHLI 1306
Score = 41.1 bits (92), Expect = 0.17
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 341 SHATFRDYYQNKYGVTITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAK 400
S AT+ ++++ ++ + ++ +QPLL NLL R LP E T
Sbjct: 911 SGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNR--------LP---ETTESEG 959
Query: 401 RERLDQKQLLLPELC--RAHPFAAPLWAATVALPCALYRINALLIAEEIR 448
RE L+ L PELC + F+ + ++ LP +YR+ LL+A E++
Sbjct: 960 RELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELK 1009
>UniRef50_Q9SP32 Cluster: Endoribonuclease Dicer homolog; n=8;
Embryophyta|Rep: Endoribonuclease Dicer homolog -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1909
Score = 91.9 bits (218), Expect = 9e-17
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 858 LEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSH 917
L +P P+ S IL+ALT ++ + ER E +GD++LK+ ++ +L+ +P HEG+L+
Sbjct: 1349 LISYPIPT-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1407
Query: 918 MRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQD--KK 975
MR + VSN+ LY+ K L S + A +F P W P PP G +
Sbjct: 1408 MRQQMVSNMVLYQFALVKGLQSYIQADRFAP-SRWSAP--GVPPVFDEDTKDGGSSFFDE 1464
Query: 976 QNVDSSPENVGCF---------IPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALL 1026
+ S EN F + +L + + K++AD VEALIG Y +E G A
Sbjct: 1465 EQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANH 1524
Query: 1027 FMSWLGIAV 1035
M W+GI V
Sbjct: 1525 LMKWIGIHV 1533
Score = 57.2 bits (132), Expect = 2e-06
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 322 FLVAEICWRLSPDSVFPSAS-------HATFRDYYQNKYGVTITQSKQPLLDVDHTSARL 374
F V IC+ +S ++ FP + T+ DYY+ KYGV + +QPL+ S
Sbjct: 1225 FYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCK 1284
Query: 375 NLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCRAHPFAAPLWAATVALPCA 434
NLL+PR+ + G + V ++T L PELC HP + L LP
Sbjct: 1285 NLLSPRF-EQSGESETV-LDKTYYV---------FLPPELCVVHPLSGSLIRGAQRLPSI 1333
Query: 435 LYRINALLIAEEIRRSVAVEV 455
+ R+ ++L+A +++ ++ +
Sbjct: 1334 MRRVESMLLAVQLKNLISYPI 1354
Score = 40.3 bits (90), Expect = 0.29
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 868 VILQALT-MSNANDGINL-ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
++++A+T S + G++ +RLE VGD+ L IT +L+ + ++ G+L+ +R+ V+N
Sbjct: 1575 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNN 1634
Query: 926 LNLYRLGRNKQL 937
N R+ +L
Sbjct: 1635 ENFARVAVKHKL 1646
>UniRef50_Q10HL3 Cluster: Type III restriction enzyme, res subunit
family protein, expressed; n=10; Oryza sativa|Rep: Type
III restriction enzyme, res subunit family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1410
Score = 87.8 bits (208), Expect = 1e-15
Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 869 ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
IL+ALT + + E LET+GDSFLK+ T +L+ + HEG L+ M+ +SN L
Sbjct: 990 ILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAAL 1049
Query: 929 YRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCF 988
+L + L + A +F P D W+ PC L+ + +D K+ +
Sbjct: 1050 CQLACSSNLVGYIHAEEFNPRD-WIIPC----------LDYDERDNKK--------ISFL 1090
Query: 989 IPYNLITQH--SIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
P + +Q SI K IAD VEALIGAYL G + A L M LG+ +
Sbjct: 1091 APNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNI 1139
>UniRef50_Q9M9P8 Cluster: T17B22.1 protein; n=13; Eukaryota|Rep:
T17B22.1 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 2042
Score = 87.4 bits (207), Expect = 2e-15
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 869 ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
+L+A+T D +LE LET+GDSFLK+A+ L+ HEG LS + +SN+ L
Sbjct: 1633 VLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVML 1692
Query: 929 YRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCF 988
+ G ++L + FEP W+ P +N D+ PE+ +
Sbjct: 1693 CQFGCQQKLQGFIRDECFEP-KGWMVPGQS--SAAYSLVN----------DTLPESRNIY 1739
Query: 989 IPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
+ ++ ++ KS+AD VE+LIGAYL E G AL+FM+W+GI V
Sbjct: 1740 V----ASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKV 1782
Score = 39.9 bits (89), Expect = 0.38
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+RLE +GDS L + IT +LY +P + G L+ MRS V+N
Sbjct: 1839 QRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNN 1879
>UniRef50_A7PV34 Cluster: Chromosome chr4 scaffold_32, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_32, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1340
Score = 87.4 bits (207), Expect = 2e-15
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 869 ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
+L+A+T + +G +LE LET+GDSFLK+A + L+ N HEG LS + + +SN +L
Sbjct: 925 VLEAITTKHCQEGFHLESLETLGDSFLKYAASQQLFKTFQNHHEGLLSVKKERIISNASL 984
Query: 929 YRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCF 988
+LG +++L + F+P W+ + G + +V E +
Sbjct: 985 CKLGCDRKLPGFIRNESFDP-KKWI---------------IAGDQSRSHV-FGEELLSST 1027
Query: 989 IPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
+ + + K IAD VEALIGA+L G AL+FM WLGI V
Sbjct: 1028 RKIYVSERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGINV 1074
Score = 40.7 bits (91), Expect = 0.22
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 837 PYYEDDKGGQKREFDFDFQPVLEGHPGPSPSVILQALTMSN---ANDGINLERLETVGDS 893
PY D KR + + + + PS++++ALT + +RLE +GD+
Sbjct: 1080 PYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1139
Query: 894 FLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
L + +T +LY +P + G L+ +RS V+N
Sbjct: 1140 VLDYLMTMHLYHKYPGMSPGLLTDLRSASVNN 1171
>UniRef50_A7PXV4 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1961
Score = 84.6 bits (200), Expect = 1e-14
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 864 PSPSV-ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
P P+ IL+ALT ++ + ER E +GD++LK+ ++ +L+ +P HEG+L+ MR +
Sbjct: 1411 PVPAAKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1470
Query: 923 VSNLNLYRLGRNKQLGSRMIASKFEPHDNW-----LPPCHEPPPTLQPKL---------N 968
VSN+ LY+ K L S + A +F P W LP E + L
Sbjct: 1471 VSNMVLYQSALCKGLQSYIQADRFAP-SRWAAPGVLPVFDEDTKETESSLFDHERPFSET 1529
Query: 969 LNGQDKKQNVDSSPENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFM 1028
G D+ + E + + + + K++AD VEALIG Y +E G A M
Sbjct: 1530 APGNDRHGDGYDDDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLM 1589
Query: 1029 SWLGIAV 1035
W+GI V
Sbjct: 1590 KWIGIQV 1596
Score = 54.4 bits (125), Expect = 2e-05
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 317 DQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVTITQSKQPLLDVDHTSARLNL 376
D +Y + AE + + P ++++ DYY+ KYGV + +QPL+ S NL
Sbjct: 1285 DSVRYDMTAENSFPRKEGYLGP-LEYSSYADYYRQKYGVELIYKQQPLIRGRGVSYCKNL 1343
Query: 377 LTPRYVNRKGVALPVSSERTRRAKRERLDQKQ--LLLPELCRAHPFAAPLWAATVALPCA 434
L+PR+ + +G S+ T LD+ L PELC HP L + LP
Sbjct: 1344 LSPRFEHSEG-----ESDET-------LDKTYYVFLPPELCFVHPLPGSLVRSAQRLPSI 1391
Query: 435 LYRINALLIAEEIR 448
+ R+ ++L+A +++
Sbjct: 1392 MRRVESMLLAVQLK 1405
Score = 40.7 bits (91), Expect = 0.22
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 868 VILQALT-MSNANDGINL-ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
++++A+T S + G++ +RLE VGD+ L IT +L+ + ++ G+L+ +R+ V+N
Sbjct: 1638 LLIEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNN 1697
Query: 926 LNLYRLGRNKQL 937
N R+ +L
Sbjct: 1698 ENFARVAVKHKL 1709
>UniRef50_Q0IWV3 Cluster: Os10g0485600 protein; n=7; Eukaryota|Rep:
Os10g0485600 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1605
Score = 83.8 bits (198), Expect = 2e-14
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 2/170 (1%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
++IL+A+T + +LERLE +GDS LK+ + L+ +P HEG+LS MRSK V N
Sbjct: 1074 TLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNA 1133
Query: 927 NLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVG 986
L++ G + L + + F+P W+ P + + ++
Sbjct: 1134 TLHKHGIWRSLQGYVRDNAFDPR-RWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPS 1192
Query: 987 CFIPYNLITQHS-IPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
F+ H + K+I+DCVEAL+GAY + G AL M W GI +
Sbjct: 1193 FFVGKPCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDI 1242
Score = 44.8 bits (101), Expect = 0.013
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 868 VILQALTMSNAND-GINL--ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVS 924
++L+A+T + + G++ +RLE +GDS L +T +LY H +V G+L+ +RS VS
Sbjct: 1284 LLLEAITHPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVS 1343
Query: 925 NLN 927
N N
Sbjct: 1344 NEN 1346
>UniRef50_P84634 Cluster: Dicer-like protein 4; n=1; Arabidopsis
thaliana|Rep: Dicer-like protein 4 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1589
Score = 74.1 bits (174), Expect = 2e-11
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 20/167 (11%)
Query: 869 ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
+L+ALT ++ ++LERLE +GD+FLKFA++ +L+ H ++ EG+L+ RS N+
Sbjct: 1049 VLEALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRS------NV 1102
Query: 929 YRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCF 988
Y R++ L + P C E LN + ++S+ + C
Sbjct: 1103 YI--RDQALDPTQFFAFGHP---CRVTCDEVASKEVHSLNRD----LGILESNTGEIRCS 1153
Query: 989 IPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAV 1035
+ H + K+IAD VEAL+GA+L++ G +GA+ F+ W+G+ V
Sbjct: 1154 KGH-----HWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIGVNV 1195
Score = 39.1 bits (87), Expect = 0.67
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 877 NANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
N + G +RLE +GD+ L + +T+Y + P + G+L+ +RS V+N
Sbjct: 1248 NRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNN 1296
>UniRef50_A3A0R6 Cluster: Putative uncharacterized protein; n=4; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. japonica (Rice)
Length = 1889
Score = 72.1 bits (169), Expect = 8e-11
Identities = 55/172 (31%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 865 SPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVS 924
S +IL+A+T ++ ++ERLE +GDS LK+A EG+LS +R +
Sbjct: 992 SSFLILEAITTLRCSEDFSMERLELLGDSVLKYA------------DEGQLSSIRCHMIC 1039
Query: 925 NLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCH---EPPPTLQPKLNLNGQDKKQNVDSS 981
N LY+LG + + + + F+P WL P P P P + D +D
Sbjct: 1040 NATLYKLGIERNVQGYVRDAAFDPR-RWLAPGQLSIRPSPCECPVKSEVVTDDIHIIDDK 1098
Query: 982 PENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGI 1033
+G + K+IADCVEA+IGAY G R A+ + WLGI
Sbjct: 1099 AIVLGKACDKG---HRWMCSKTIADCVEAIIGAYYAGGGLRAAMAVLKWLGI 1147
Score = 44.0 bits (99), Expect = 0.024
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLN 927
ERLE +GD+ L +T YL+ +H + +EG+L+ +RS V+N N
Sbjct: 1211 ERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASVNNEN 1253
Score = 43.6 bits (98), Expect = 0.031
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 9/127 (7%)
Query: 331 LSPDSVFPSASHA------TFRDYYQNKYGVTITQSKQPLLDVDHTSARLNLLTPRYVNR 384
LS DS F AS TF +Y++ KYG+ + QPLL + + NLL+ ++ +
Sbjct: 861 LSGDSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDE 920
Query: 385 KGVALPVSSERTRRAKRERLDQKQLLLPELCRAHPFAAPLWAATVALPCALYRINALLIA 444
V V + + + + PEL + + P +YRI +L +A
Sbjct: 921 GNV---VENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEILRSFYLFPALMYRIESLTLA 977
Query: 445 EEIRRSV 451
++R +
Sbjct: 978 SQLRSEI 984
>UniRef50_Q95YG3 Cluster: Double-strand-specific ribonuclease; n=28;
Sophophora|Rep: Double-strand-specific ribonuclease -
Drosophila melanogaster (Fruit fly)
Length = 1722
Score = 67.3 bits (157), Expect = 2e-09
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 870 LQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLY 929
L A+T S+A D ++ERLE +GDSFLK + T YL + + +EG L+ ++SK VSN NL
Sbjct: 1195 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1254
Query: 930 RLGRNKQLGSRMIASKFEPHDNWLPP 955
+ + + +F P WLPP
Sbjct: 1255 FCLIDADIPKTLNTIQFTPRYTWLPP 1280
Score = 52.8 bits (121), Expect = 5e-05
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 301 PDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFP-SASHATFRDYYQNKYGVTI-- 357
P+ ++ +VT WY N D+P LV ++ L+P S + T+ ++ +KYG I
Sbjct: 874 PEDFEGKIVTQWYANYDKPM--LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGD 931
Query: 358 -TQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
+ +++V + +L YV+ +G + + + K +L+PELC
Sbjct: 932 VVHKDKFMIEVRDLTEQLTF----YVHNRG----------KFNAKSKAKMKVILIPELCF 977
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLG-IPH--PHARPPPLDFGW 473
F LW + LP L R+ LL AE +R+ + L +P P PL+ +
Sbjct: 978 NFNFPGDLWLKLIFLPSILNRMYFLLHAEALRKRFNTYLNLHLLPFNGTDYMPRPLEIDY 1037
Query: 474 SL 475
SL
Sbjct: 1038 SL 1039
Score = 37.1 bits (82), Expect = 2.7
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 869 ILQALTM----SNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVS 924
+LQALT +N G + + LE +GD+ L F I+AY++ + ++ G L+ +RS V+
Sbjct: 1450 LLQALTHPSYPTNRITG-SYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVN 1508
Query: 925 NLNL 928
N L
Sbjct: 1509 NTTL 1512
>UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121; Proteobacteria|Rep:
Ribonuclease 3 - Methylococcus capsulatus
Length = 230
Score = 66.5 bits (155), Expect = 4e-09
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 860 GHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMR 919
G P P ++ ALT +A +G+N ERLE +GDS L F +T YLY P+ EG LS +R
Sbjct: 13 GIPFRDPGLLRNALTHRSA-EGVNNERLEFLGDSVLGFVVTEYLYQRFPSADEGVLSRLR 71
Query: 920 SKQVSNLNLYRLGRNKQLGSRMIASKFE 947
+ V+ +L R+ R +LG +I E
Sbjct: 72 ATLVNETSLARIARELELGEYLILGSGE 99
>UniRef50_A1C9M6 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent
helicase dcl2 (EC 3.6.1.-)]; n=10; cellular
organisms|Rep: Dicer-like protein 2 [Includes:
Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent
helicase dcl2 (EC 3.6.1.-)] - Aspergillus clavatus
Length = 1389
Score = 57.6 bits (133), Expect = 2e-06
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 854 FQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEG 913
++ +L S I+ A++ +A N +R E +GDS LKF+++ L+ HPN HEG
Sbjct: 924 YETILRDVGFTSTQHIITAISAPSAQALTNYQRYEFLGDSILKFSVSCQLFFKHPNWHEG 983
Query: 914 KLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPP 955
LS R + V N L + + L + +I F P W P
Sbjct: 984 YLSEGRDEIVQNPRLTKAALDTGLDAFVITKMFTPR-KWSAP 1024
>UniRef50_A0ZZX0 Cluster: Ribonuclease III; n=2; Bifidobacterium
adolescentis|Rep: Ribonuclease III - Bifidobacterium
adolescentis (strain ATCC 15703 / DSM 20083)
Length = 262
Score = 56.8 bits (131), Expect = 3e-06
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 866 PSVILQALT---MSNANDGI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSK 921
P ++++ALT S+ ++G N ERLE +GD+ L+ T LY HP+++EG+L+ MR+K
Sbjct: 16 PDLLVEALTHRSFSHEHEGAKNYERLEFLGDAVLELVSTETLYKVHPDMNEGQLAKMRAK 75
Query: 922 QVSNLNLYRLGRNK 935
VS +L ++ R K
Sbjct: 76 AVSEESLSKIAREK 89
>UniRef50_P0C5H7 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease dcl2 (EC 3.1.26.-); ATP-dependent
helicase dcl2 (EC 3.6.1.-)]; n=15; Eurotiomycetidae|Rep:
Dicer-like protein 2 [Includes: Endoribonuclease dcl2
(EC 3.1.26.-); ATP-dependent helicase dcl2 (EC 3.6.1.-)]
- Emericella nidulans (Aspergillus nidulans)
Length = 1429
Score = 55.2 bits (127), Expect = 1e-05
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 869 ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
++ A+TM A + +R E GDS LKF + A L+ +PN HEG L+ V N L
Sbjct: 893 VITAITMPLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARL 952
Query: 929 YRLGRNKQLGSRMIASKFEPHDNWLPP 955
R ++ L + +I+++F P W P
Sbjct: 953 TRAALDQGLDAYIISNRFTPR-KWSAP 978
>UniRef50_Q6A7R5 Cluster: Ribonuclease III; n=2;
Actinomycetales|Rep: Ribonuclease III -
Propionibacterium acnes
Length = 366
Score = 54.4 bits (125), Expect = 2e-05
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 879 NDGINL-ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQL 937
N GI ERLE +GD+ L+ +T YLY A P+ EG+L+ +RS VS ++L RL R +
Sbjct: 168 NGGIPTNERLEFLGDAILEVGVTDYLYRAFPDKPEGQLAKLRSAVVSTVSLGRLARQLGI 227
Query: 938 GSRMIASKFE 947
G R+ K E
Sbjct: 228 GPRIKLGKGE 237
>UniRef50_Q6LMS2 Cluster: Ribonuclease 3; n=19;
Gammaproteobacteria|Rep: Ribonuclease 3 - Photobacterium
profundum (Photobacterium sp. (strain SS9))
Length = 224
Score = 54.4 bits (125), Expect = 2e-05
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 860 GHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMR 919
G+ S ++ +LT +AN G + ERLE +GDS L F I LY P+V EG +S MR
Sbjct: 13 GYQFNSSELMTLSLTHRSAN-GKHNERLEFLGDSILSFVIADDLYHRFPHVDEGDMSRMR 71
Query: 920 SKQVSNLNLYRLGRNKQLGSRMI 942
+ V L LGR +LG ++
Sbjct: 72 ATLVRGKTLAELGREFELGDYLL 94
>UniRef50_A1U2V5 Cluster: Ribonuclease III; n=5; Bacteria|Rep:
Ribonuclease III - Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 229
Score = 54.0 bits (124), Expect = 2e-05
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 860 GHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMR 919
G+ P +L ALT + + N ERLE +GDS + I YLY EG+LS +R
Sbjct: 15 GYQFKEPERLLLALTHRSFGNQNN-ERLEFLGDSIVNMVIAEYLYLHFEKAREGQLSRLR 73
Query: 920 SKQVSNLNLYRLGRNKQLG 938
++ V + L +GR QLG
Sbjct: 74 ARMVKGVTLAEIGREFQLG 92
>UniRef50_UPI000023D196 Cluster: hypothetical protein FG04408.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG04408.1
- Gibberella zeae PH-1
Length = 1451
Score = 53.6 bits (123), Expect = 3e-05
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLN 927
++++A++ +A + ++ ER+E +GDS LK+ Y HP EG L+H + + VSN
Sbjct: 987 LVIEAISSRSAAEPVDYERIEFLGDSVLKYCTVIQAYSEHPFWPEGLLNHFKDRLVSNTR 1046
Query: 928 LYRLGRNKQLGSRMIASKFEPHDNWLP 954
L R+ L S+ I SK W P
Sbjct: 1047 LTRMCLETGL-SKFIFSKTFTGIKWRP 1072
>UniRef50_Q8G7H1 Cluster: Ribonuclease 3; n=2; Bifidobacterium
longum|Rep: Ribonuclease 3 - Bifidobacterium longum
Length = 242
Score = 53.6 bits (123), Expect = 3e-05
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 865 SPSVILQALT---MSNANDGI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRS 920
SP +++QALT S+ + G+ N ERLE +GD+ L+ T L+ HP++ EG+L+ MR+
Sbjct: 24 SPDLLVQALTHRSFSHEHPGVANYERLEFLGDAVLELVSTETLFTIHPDMTEGQLAKMRA 83
Query: 921 KQVSNLNLYRLGRNK 935
K VS L + + K
Sbjct: 84 KAVSEDALSAIAKTK 98
>UniRef50_Q9KPB2 Cluster: Ribonuclease 3; n=22;
Gammaproteobacteria|Rep: Ribonuclease 3 - Vibrio
cholerae
Length = 225
Score = 52.8 bits (121), Expect = 5e-05
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 872 ALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRL 931
ALT +AN G + ERLE +GDS L F I LY P V+EG +S MR+ V L L
Sbjct: 25 ALTHRSAN-GKHNERLEFLGDSILSFVIADELYRRFPKVNEGDMSRMRATLVRGNTLAEL 83
Query: 932 GRNKQLG 938
GR LG
Sbjct: 84 GREFDLG 90
>UniRef50_Q190G5 Cluster: Ribonuclease III; n=3; Peptococcaceae|Rep:
Ribonuclease III - Desulfitobacterium hafniense (strain
DCB-2)
Length = 262
Score = 52.0 bits (119), Expect = 9e-05
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 877 NANDGI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNK 935
N G+ N +RLE +GD+ L F + YLY ++P EG+L+ MR+ V+ L R +
Sbjct: 65 NPQSGLENNQRLEFLGDAILDFVVAEYLYLSYPERPEGELTKMRAAVVNESTLARTAKKI 124
Query: 936 QLGSRMIASKFE 947
+LG ++ K E
Sbjct: 125 RLGEELLLGKGE 136
>UniRef50_Q9PB98 Cluster: Ribonuclease 3; n=14;
Gammaproteobacteria|Rep: Ribonuclease 3 - Xylella
fastidiosa
Length = 227
Score = 52.0 bits (119), Expect = 9e-05
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 853 DFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHE 912
D+Q + G+ PS++LQAL +A N ERLE +GDS + I L+ P E
Sbjct: 8 DYQQRI-GYVFTDPSLLLQALRHCSAGTPHN-ERLEFLGDSVVNLLIAEALFQRWPRADE 65
Query: 913 GKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
G L+ RS+ V +L + R QLG ++I
Sbjct: 66 GALTRARSELVRETSLASIARTMQLGEQLI 95
>UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27;
Epsilonproteobacteria|Rep: Ribonuclease 3 - Helicobacter
hepaticus
Length = 240
Score = 52.0 bits (119), Expect = 9e-05
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 860 GHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMR 919
G+ + ++L+ALT + N ERLE +GD+ L + YL+ P EG+LS +R
Sbjct: 18 GYVFQNQQLLLEALTHKSCKKQYNNERLEFLGDAVLDLLVGEYLFKKFPLAKEGELSKLR 77
Query: 920 SKQVSNLNLYRLGRNKQLGSRMIASKFEPHDN 951
+ V+ +L ++ LG+ + S+ E ++N
Sbjct: 78 ACIVNEKGFMKLAQSLDLGAYLYISQSEENNN 109
>UniRef50_O51648 Cluster: Ribonuclease 3; n=3; Borrelia burgdorferi
group|Rep: Ribonuclease 3 - Borrelia burgdorferi (Lyme
disease spirochete)
Length = 246
Score = 52.0 bits (119), Expect = 9e-05
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
N ERLE +GDS L IT +LY +PN EG+LS RS VS +L + R LGS ++
Sbjct: 55 NNERLEFLGDSVLNLIITDHLYKTYPNKSEGELSKARSYIVSEDSLSNIAREINLGSYIL 114
Query: 943 ASKFE 947
+ E
Sbjct: 115 LGRGE 119
>UniRef50_A6PN64 Cluster: Ribonuclease III; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribonuclease III -
Victivallis vadensis ATCC BAA-548
Length = 232
Score = 51.2 bits (117), Expect = 2e-04
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 860 GHPGPSPSVILQALTMSNA----NDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKL 915
G GP + + +A+T + N G + +RLE +GD+ L+ +T YL+ +P+ EG++
Sbjct: 13 GFAGPWSNRLAEAVTHRSYAVENNLGYDNQRLEFLGDAVLEIILTEYLFHLYPDAAEGEM 72
Query: 916 SHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDN 951
+ +RS V L RL R +LG ++ + E HD+
Sbjct: 73 TKIRSALVREPALARLARRFELGEYLLTGRGE-HDS 107
>UniRef50_Q0E5R5 Cluster: Putative dicer-like protein; n=1; Mucor
circinelloides|Rep: Putative dicer-like protein - Mucor
circinelloides
Length = 1529
Score = 50.8 bits (116), Expect = 2e-04
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 25/151 (16%)
Query: 869 ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
+L+A T S+A + +RLE +GDS LKF + Y++ P +E +L+ R + +SN L
Sbjct: 1064 MLEAFTASSAGLEKDYQRLEFLGDSVLKFITSTYVFVTLPISNEFELTESRMRMISNTAL 1123
Query: 929 YRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCF 988
++ +L I S+ P + PP + L D + + S
Sbjct: 1124 FKSAIQLRL-YEYICSQNLPRRFYRPPNY-----------LCKDDSAEMIKS-------- 1163
Query: 989 IPYNLITQHSIPDKSIADCVEALIGAYLLEC 1019
+T H + DK++AD VE+ +GA L C
Sbjct: 1164 -----LTYHKLSDKTLADVVESTLGASYLSC 1189
Score = 40.7 bits (91), Expect = 0.22
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 342 HATFRDYYQNKYGVT--ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRA 399
+ATF+DYY+++ ++ IT QPL+ V + R S ++
Sbjct: 953 YATFKDYYEDQEFLSKKITDMAQPLIQVHRVPKNQSFRQVR-----------GSSMMKKR 1001
Query: 400 KRERLDQKQLLLPELCRAHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGI 459
RE L+PELC +P +A ++ +P + I+A+L+ + ++++ + +
Sbjct: 1002 DREPESVVHWLVPELCLQYPISASVYQTLQLVPDIMMHIDAVLLMHDAKKALGLSGRMKD 1061
Query: 460 PH 461
P+
Sbjct: 1062 PY 1063
Score = 36.3 bits (80), Expect = 4.7
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 860 GHPGPSPSVILQALTMSNA-NDGINL-ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSH 917
G+ + ++I +ALT ++ N + +RLE +GD+ L F +T YL+ + G L
Sbjct: 1259 GYEFQNEALIAEALTHASVTNSSVPCYQRLEFLGDAVLDFCVTNYLFEKYHTAPPGTLHD 1318
Query: 918 MRSKQVSN 925
+R V+N
Sbjct: 1319 LRKSSVNN 1326
>UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria
(class)|Rep: Ribonuclease 3 - Streptomyces avermitilis
Length = 276
Score = 50.8 bits (116), Expect = 2e-04
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 841 DDKGGQKREFDFDFQPVLEGHPGPS--PSVILQALTMSN---ANDGINL-ERLETVGDSF 894
D +K + +LEG G +++++ALT + N G+ ERLE +GDS
Sbjct: 7 DSTAKKKADNTASSHTLLEGRLGYKLESALLVRALTHRSYAYENGGLPTNERLEFLGDSV 66
Query: 895 LKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGS 939
L +T LY HP++ EG+L+ +R+ V++ L +GR +LGS
Sbjct: 67 LGLVVTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGS 111
>UniRef50_Q2GNP6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1227
Score = 50.4 bits (115), Expect = 3e-04
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
S+I+ A+T S A + ER+E +GDS LKF T + EG LS ++ K VSN
Sbjct: 947 SLIVTAITASAARGPTDYERIEFLGDSILKFCTTINCSATYLKFPEGCLSPLKDKIVSNS 1006
Query: 927 NLYRLGRNKQLGSRMIASKFEPHDNWLP 954
L+R + L +I F H W P
Sbjct: 1007 RLFRAAVDFGLDRYIIHKAFTLH-KWRP 1033
>UniRef50_A1DE13 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease dcl1 (EC 3.1.26.-); ATP-dependent
helicase dcl1 (EC 3.6.1.-)]; n=5; Trichocomaceae|Rep:
Dicer-like protein 1 [Includes: Endoribonuclease dcl1 (EC
3.1.26.-); ATP-dependent helicase dcl1 (EC 3.6.1.-)] -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 1538
Score = 50.4 bits (115), Expect = 3e-04
Identities = 48/141 (34%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSR 940
G N ERLE +GD FLK A + LY +P+ E R + N NL+ KQ+ R
Sbjct: 1087 GKNYERLEFLGDCFLKMATSIALYTQNPDDDEFDYHVNRMCLICNKNLFNTAIKKQI-YR 1145
Query: 941 MIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCFIPYNLITQHSIP 1000
I S+ W P TL L+G+D + + S +H++
Sbjct: 1146 YIRSRGFSRHIWYP----DGLTL-----LHGKDHSKKLLSE-------------GKHALG 1183
Query: 1001 DKSIADCVEALIGAYLLECGP 1021
+K+IAD EALIGA LL GP
Sbjct: 1184 EKTIADVCEALIGASLLSGGP 1204
>UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core
eudicotyledons|Rep: Similarity to CAF protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 391
Score = 50.0 bits (114), Expect = 4e-04
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
S++ +A+T ++ D + ERLE +GDS + AI+ YLY +P++ LS +R+ VS
Sbjct: 75 SLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTE 134
Query: 927 NLYRLGRNKQLGS 939
L R+ N L S
Sbjct: 135 KLARVSLNHGLYS 147
>UniRef50_Q2VF18 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease DCL-2 (EC 3.1.26.-); ATP-dependent
helicase DCL-2 (EC 3.6.1.-)]; n=1; Cryphonectria
parasitica|Rep: Dicer-like protein 2 [Includes:
Endoribonuclease DCL-2 (EC 3.1.26.-); ATP-dependent
helicase DCL-2 (EC 3.6.1.-)] - Cryphonectria parasitica
(Chesnut blight fungus) (Endothiaparasitica)
Length = 1451
Score = 50.0 bits (114), Expect = 4e-04
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
S++++A+ +A N ER+E +GDS LK IT L ++ EG LS M+ + VSN
Sbjct: 985 SMLVEAICAKSARTPENYERIEFLGDSILKTCITVNLAATKLHLPEGILSLMKDRLVSNA 1044
Query: 927 NLYRLGRNKQLGSRMIASKFEPHDNWLPP 955
L R + +L ++ + W PP
Sbjct: 1045 RLCRAACDAELDQFLVTQQLVT-KGWQPP 1072
>UniRef50_A2RAF3 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease dcl1 (EC 3.1.26.-); ATP-dependent
helicase dcl1 (EC 3.6.1.-)]; n=6; Trichocomaceae|Rep:
Dicer-like protein 1 [Includes: Endoribonuclease dcl1 (EC
3.1.26.-); ATP-dependent helicase dcl1 (EC 3.6.1.-)] -
Aspergillus niger
Length = 1525
Score = 50.0 bits (114), Expect = 4e-04
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSR 940
G N ERLE +GD FLK A + L+ +P+ E R + N NL+ +K++
Sbjct: 1076 GRNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKY 1135
Query: 941 MIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCFIPYNLITQHSIP 1000
+ + F H W P KL L G+D + + ++H++
Sbjct: 1136 IRSRGFSRH-TWYPE--------GLKL-LQGKDHSRKATTE-------------SKHALA 1172
Query: 1001 DKSIADCVEALIGAYLLECGP 1021
+K+IAD EALIGA LL GP
Sbjct: 1173 EKTIADVCEALIGAALLSGGP 1193
>UniRef50_Q97IA4 Cluster: Ribonuclease 3; n=3; Clostridium|Rep:
Ribonuclease 3 - Clostridium acetobutylicum
Length = 230
Score = 49.6 bits (113), Expect = 5e-04
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 867 SVILQALTMSN-ANDGINLE---RLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
++++ ALT S+ AN+ N E RLE +GD+ L+ +I+ Y + +P + EG+L+ R+
Sbjct: 22 NLLVTALTHSSYANENKNAEYNERLEFLGDAVLQLSISEYFFKKYPTISEGELTKKRALV 81
Query: 923 VSNLNLYRLGRNKQLG 938
V ++L+ +G QLG
Sbjct: 82 VCGMSLHSIGERWQLG 97
>UniRef50_Q3B0H4 Cluster: Ribonuclease III; n=2; Synechococcus|Rep:
Ribonuclease III - Synechococcus sp. (strain CC9902)
Length = 249
Score = 49.2 bits (112), Expect = 6e-04
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
S++ +AL +A N ERLE +GD+ L+ A T ++ +PN+ G+ S +R++ VS+
Sbjct: 28 SLVDEALIHVSAGRSKNFERLEFLGDAVLRLAATEFIDQQYPNLPVGRCSSLRAQLVSDR 87
Query: 927 NLYRLGRNKQLGSRMI 942
L +LG QL S ++
Sbjct: 88 WLAQLGEQLQLESFLV 103
>UniRef50_Q6SFI8 Cluster: Ribonuclease III; n=2; Bacteria|Rep:
Ribonuclease III - uncultured bacterium 580
Length = 231
Score = 48.8 bits (111), Expect = 8e-04
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 870 LQALTMSN-ANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
L AL M++ ++ G+N ERLE +GDS L F + L+ ++ EG LS +RS+ V L
Sbjct: 22 LLALAMTHRSHSGMNNERLEFLGDSILNFVVADLLFKKFNDLDEGDLSRLRSQLVKEEPL 81
Query: 929 YRLGRNKQLG 938
+LG ++G
Sbjct: 82 SKLGNELKIG 91
>UniRef50_A1AWQ6 Cluster: Ribonuclease III; n=2; sulfur-oxidizing
symbionts|Rep: Ribonuclease III - Ruthia magnifica
subsp. Calyptogena magnifica
Length = 221
Score = 48.8 bits (111), Expect = 8e-04
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
S++ ALT + N ERLE +GDS L I+ LY PN+ EGKLS +RS V +
Sbjct: 16 SLLKLALTHCSMGKNNN-ERLEFLGDSILGVIISKELYQRFPNIDEGKLSRLRSHLVRDQ 74
Query: 927 NLYRLGRNKQLGSRMI 942
L +L +L + +I
Sbjct: 75 TLTQLSAGLELSNSLI 90
>UniRef50_Q7SCC1 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease dcl-2 (EC 3.1.26.-); ATP-dependent
helicase dcl-2 (EC 3.6.1.-)]; n=2; Neurospora crassa|Rep:
Dicer-like protein 2 [Includes: Endoribonuclease dcl-2
(EC 3.1.26.-); ATP-dependent helicase dcl-2 (EC 3.6.1.-)]
- Neurospora crassa
Length = 1539
Score = 48.8 bits (111), Expect = 8e-04
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLN 927
+I AL S + N ERLE +GD+ LKF PN HE LS + K V+N+
Sbjct: 986 LITTALISSGSRGPTNYERLEFIGDTILKFCACLTASALFPNHHERLLSQWKDKLVNNVR 1045
Query: 928 LYRLGRNKQLGSRMIAS 944
L R R+ L +I S
Sbjct: 1046 LCRASRDFGLDEYIINS 1062
>UniRef50_UPI0000E0E146 Cluster: ribonuclease III; n=1; alpha
proteobacterium HTCC2255|Rep: ribonuclease III - alpha
proteobacterium HTCC2255
Length = 241
Score = 48.4 bits (110), Expect = 0.001
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
S++ QALT +A+ N ERLE +GD+ L + +L+ A PN EGKL+ MRS V
Sbjct: 36 SLLKQALTHKSAHRQHN-ERLEFLGDAVLGMIVGEHLFKAFPNSPEGKLTRMRSAIVKGD 94
Query: 927 NLYRLGRNKQLG 938
L + K LG
Sbjct: 95 TLAEIALEKGLG 106
>UniRef50_Q46IK9 Cluster: Ribonuclease III, bacterial; n=2;
Prochlorococcus marinus|Rep: Ribonuclease III, bacterial
- Prochlorococcus marinus (strain NATL2A)
Length = 247
Score = 48.4 bits (110), Expect = 0.001
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 869 ILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
I ++LT S+AN IN E LE +GD+ L+ + ++ +P + G+ S +RS VS+L L
Sbjct: 39 INESLTHSSANSEINYENLEFLGDAVLRLIASDFIKNKYPYMQVGERSELRSHLVSDLWL 98
Query: 929 YRLGRNKQLGSRMI 942
+G+ ++ S ++
Sbjct: 99 EEVGKKIEINSVLV 112
>UniRef50_Q09884 Cluster: Protein Dicer (Cell cycle control protein
dcr1) (RNA interference pathway protein dcr1) [Includes:
Endoribonuclease dcr1 (EC 3.1.26.-); ATP-dependent
helicase dcr1 (EC 3.6.1.-)]; n=2; Fungi/Metazoa
group|Rep: Protein Dicer (Cell cycle control protein
dcr1) (RNA interference pathway protein dcr1) [Includes:
Endoribonuclease dcr1 (EC 3.1.26.-); ATP-dependent
helicase dcr1 (EC 3.6.1.-)] - Schizosaccharomyces pombe
(Fission yeast)
Length = 1374
Score = 48.4 bits (110), Expect = 0.001
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 871 QALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYR 930
QALT + + + +RLE GD FLK + ++ P+ E +L R K +SN NLY+
Sbjct: 916 QALTSAESQLNFDYDRLEFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYK 975
Query: 931 LGRNKQLGSRMIASKFEPHDNWLP 954
+ + +L +++ E +W P
Sbjct: 976 VAIDCELPKYALSTPLEIR-HWCP 998
Score = 40.7 bits (91), Expect = 0.22
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLG 932
N ++LE +GD+ L + I YLY +PN G+L+ +S V N +L +G
Sbjct: 1118 NYQQLEFLGDAVLDYIIVQYLYKKYPNATSGELTDYKSFYVCNKSLSYIG 1167
>UniRef50_A6R2T0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1437
Score = 48.0 bits (109), Expect = 0.001
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
S+++ A++ S A + N +R+E +GDS LKF T L + HEG LS + VSN
Sbjct: 928 SLVITAISASVAREATNYQRIEFLGDSILKFQTTLQLTATNLIWHEGLLSRAKDTVVSNK 987
Query: 927 NLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVG 986
L L ++ F W PP + K +++S + V
Sbjct: 988 RLSYAAIEAGLDKFILLDVF-TGAKWRPPYN-----------------KDHLESEEQGV- 1028
Query: 987 CFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGA 1024
Q + K++AD VEAL+ A L+ G R A
Sbjct: 1029 --------AQREMSTKTLADVVEALLAAATLDGGQRKA 1058
>UniRef50_Q7VRR0 Cluster: Ribonuclease 3; n=4;
Gammaproteobacteria|Rep: Ribonuclease 3 - Blochmannia
floridanus
Length = 232
Score = 48.0 bits (109), Expect = 0.001
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLN 927
++L+ALT + ++ N ERLE +GDS L ++IT LY + ++ EG +S +RS V +
Sbjct: 25 LLLRALTHRSFSNKHN-ERLEFLGDSILNYSITNILYHRYNHMDEGDMSRIRSSLVCSRT 83
Query: 928 LYRLGRNKQLGS 939
L L + +LG+
Sbjct: 84 LVELAKEFKLGN 95
>UniRef50_A4J683 Cluster: Ribonuclease III; n=1; Desulfotomaculum
reducens MI-1|Rep: Ribonuclease III - Desulfotomaculum
reducens MI-1
Length = 246
Score = 47.6 bits (108), Expect = 0.002
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 865 SPSVILQALTMSNA---NDGINL---ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHM 918
+P++++QALT S+ N G L +RLE +GD+ L+ I+ +LY P+ EG+L+ M
Sbjct: 21 NPTLLIQALTHSSCVHENRGHGLCHNQRLEFLGDAVLELIISEHLYKMFPDRTEGELTKM 80
Query: 919 RSKQVSNLNLYRLGRNKQLG 938
R+ V +L ++ R LG
Sbjct: 81 RASSVCEPSLAKVARGLDLG 100
>UniRef50_A6SDY7 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1398
Score = 47.6 bits (108), Expect = 0.002
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
S+I A+T ++ + N +RLE +GDS LK + L H + HEG LS M+ + VSN
Sbjct: 968 SLIQTAITHASYSLDSNYQRLEFLGDSILKLCTSVQLVAEHLDWHEGYLSAMKDRIVSNS 1027
Query: 927 NLYRLGRNKQLGSRMIASKF 946
R L ++ KF
Sbjct: 1028 RSSRAAAEVGLDEYIMTKKF 1047
>UniRef50_Q5NER3 Cluster: Ribonuclease 3; n=11; Francisella
tularensis|Rep: Ribonuclease 3 - Francisella tularensis
subsp. tularensis
Length = 230
Score = 47.6 bits (108), Expect = 0.002
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
+++++ALT + N ERLE +GDS L F I LY ++ EGKLS +RSK V
Sbjct: 20 TLLIRALTHRSKTKK-NYERLEFLGDSVLSFVIAEVLYKQFIDLAEGKLSQLRSKLVKGA 78
Query: 927 NLYRLGRNKQLGSRMIASKFE 947
L +L + ++ +I E
Sbjct: 79 TLAQLASSLKMDEYIILGASE 99
>UniRef50_Q8XJN8 Cluster: Ribonuclease 3; n=20; Bacteria|Rep:
Ribonuclease 3 - Clostridium perfringens
Length = 237
Score = 47.2 bits (107), Expect = 0.003
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 868 VILQALTMSN-ANDGINL---ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQV 923
V++ ALT S+ AN ++ ERLE +GDS L+ +T YL+ + + EG+L+ +R+ V
Sbjct: 22 VLITALTHSSYANQFKDVKYNERLEFLGDSVLQLCVTKYLFNNYKDKSEGELTKIRALVV 81
Query: 924 SNLNLYRLGRNKQLGSRMIASKFE 947
+L+++ +N LG + SK E
Sbjct: 82 CENSLHKVSKNLSLGKYIRMSKGE 105
>UniRef50_Q2GCL4 Cluster: Ribonuclease III; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribonuclease III -
Neorickettsia sennetsu (strain Miyayama)
Length = 222
Score = 46.8 bits (106), Expect = 0.003
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLN 927
++++ALT + + ERLE +GD+ L I + LY P EG+LSH +S +
Sbjct: 19 LLVEALTHPSVEKCPSYERLEFLGDAVLNLVIASMLYDLFPGDPEGRLSHRQSALICKNT 78
Query: 928 LYRLGRNKQLGSRMIASKFE 947
L L R LG + S E
Sbjct: 79 LAMLARQMNLGDYIRLSSSE 98
>UniRef50_Q1YS28 Cluster: Ribonuclease III; n=1; gamma
proteobacterium HTCC2207|Rep: Ribonuclease III - gamma
proteobacterium HTCC2207
Length = 225
Score = 46.8 bits (106), Expect = 0.003
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 870 LQALTMSNANDGINL-ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
L L +S+ + G N ERLE +GD+ L AI+++L+ P EG LS +RS+ V +L
Sbjct: 21 LLTLALSHRSCGSNNNERLEFLGDAVLGMAISSFLFQRFPEAREGDLSRIRSQVVRAESL 80
Query: 929 YRLGRNKQLGSRMI 942
+ R LG ++
Sbjct: 81 AEIARKLDLGPELL 94
>UniRef50_Q1JXG8 Cluster: Ribonuclease III; n=1; Desulfuromonas
acetoxidans DSM 684|Rep: Ribonuclease III -
Desulfuromonas acetoxidans DSM 684
Length = 244
Score = 46.8 bits (106), Expect = 0.003
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLG 938
ER E +GD+ L + YL+C +P + EG+LS +RS+ VS L ++ R LG
Sbjct: 52 ERQEFLGDAVLDLVMADYLFCTYPQLPEGELSRIRSELVSARALAKVARRLNLG 105
>UniRef50_A2Y2L5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 344
Score = 46.4 bits (105), Expect = 0.004
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 871 QALT-MSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLY 929
+ALT S A+D ++ +RLE VGDS L A + +LY +P + G LS +R+ +S L
Sbjct: 50 EALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPGPLSTLRAANISTEKLA 109
Query: 930 RL 931
R+
Sbjct: 110 RV 111
>UniRef50_Q6MEK1 Cluster: Ribonuclease 3; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Ribonuclease 3 -
Protochlamydia amoebophila (strain UWE25)
Length = 242
Score = 46.4 bits (105), Expect = 0.004
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 877 NANDGINL--ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRN 934
N N +N ERLE +GDS L I+ YLYC P EG+LS++RS+ V + ++
Sbjct: 46 NENREVNQHNERLEFLGDSVLGMLISDYLYCKLPKTPEGQLSYLRSRLVEASSCVHYIQS 105
Query: 935 KQLGSRMIASKFE 947
L ++ K E
Sbjct: 106 LDLSGYLLLGKGE 118
>UniRef50_Q1NXA7 Cluster: Ribonuclease III; n=2; delta
proteobacterium MLMS-1|Rep: Ribonuclease III - delta
proteobacterium MLMS-1
Length = 233
Score = 46.0 bits (104), Expect = 0.006
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 876 SNANDGINL-ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRN 934
+ A G++ ERLE +GD+ L A+ A LY AHP + EG LS R+ V+ +L + R
Sbjct: 36 AEAGKGVSSNERLEFLGDAVLGLAVAALLYEAHPTMPEGDLSRHRAALVNEEHLAGMARQ 95
Query: 935 KQLG 938
LG
Sbjct: 96 LALG 99
>UniRef50_Q1FET5 Cluster: Ribonuclease III; n=1; Clostridium
phytofermentans ISDg|Rep: Ribonuclease III - Clostridium
phytofermentans ISDg
Length = 235
Score = 46.0 bits (104), Expect = 0.006
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 866 PSVILQALTMSN-ANDG-----INLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMR 919
P ++ QALT S+ AN+ N ERLE +GD+ L+ + +L+ HP + EG L+ +R
Sbjct: 24 PGLLRQALTHSSFANEKRLSKLANNERLEFLGDAVLELTTSEWLFEKHPKMPEGDLTKLR 83
Query: 920 SKQVSNLNLYRLGRNKQLGSRMIASKFE 947
+ V L R LG+ + K E
Sbjct: 84 ASMVCEQTLALCARELHLGNYVFLGKGE 111
>UniRef50_Q6NGH3 Cluster: Ribonuclease 3; n=6; Corynebacterium|Rep:
Ribonuclease 3 - Corynebacterium diphtheriae
Length = 249
Score = 46.0 bits (104), Expect = 0.006
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 849 EFD-FDFQPVLE--GHPGPSPSVILQALTMSNAND-GI--NLERLETVGDSFLKFAITAY 902
EF+ D QP+++ G P ++L S AN+ G+ N ERLE +GDS L ++
Sbjct: 17 EFESVDHQPLIDALGVDIPRELLVLALTHRSFANENGMLPNNERLEFLGDSVLGLSVAGQ 76
Query: 903 LYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEP-HD 950
LY + + E +S MR+ VS L + R LG ++ K E HD
Sbjct: 77 LYQQYTSSPESDISKMRASIVSRYGLADIAREINLGQHILLGKGEQLHD 125
>UniRef50_A4GHU1 Cluster: Ribonuclease III; n=1; uncultured marine
bacterium EB0_39H12|Rep: Ribonuclease III - uncultured
marine bacterium EB0_39H12
Length = 218
Score = 45.6 bits (103), Expect = 0.008
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
N ERLE +GD+ L ++ L+ + N+ EGKL+ ++ VS NL+R+ N +L + +
Sbjct: 32 NNERLEFLGDAILNLYVSERLFNTYGNLKEGKLTRFKASIVSRENLHRVAINLELSNHIK 91
Query: 943 ASKFE 947
K E
Sbjct: 92 LGKGE 96
>UniRef50_Q4FUV6 Cluster: Ribonuclease 3; n=6;
Gammaproteobacteria|Rep: Ribonuclease 3 - Psychrobacter
arcticum
Length = 265
Score = 45.6 bits (103), Expect = 0.008
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 872 ALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRL 931
ALT + + N ERLE +GD+ L + LY +P +EG+L+ MR+ V +L +
Sbjct: 54 ALTHRSFDSKKNYERLEFLGDALLGMIVGEALYHRYPTQNEGRLTRMRATLVRQESLVII 113
Query: 932 GRNKQLGSRMI 942
+N +L +++I
Sbjct: 114 AQNLELSNQLI 124
>UniRef50_Q2VF19 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease DCL-1 (EC 3.1.26.-); ATP-dependent
helicase DCL-1 (EC 3.6.1.-)]; n=2; Sordariomycetes|Rep:
Dicer-like protein 1 [Includes: Endoribonuclease DCL-1
(EC 3.1.26.-); ATP-dependent helicase DCL-1 (EC 3.6.1.-)]
- Cryphonectria parasitica (Chesnut blight fungus)
(Endothiaparasitica)
Length = 1548
Score = 45.6 bits (103), Expect = 0.008
Identities = 43/135 (31%), Positives = 58/135 (42%), Gaps = 24/135 (17%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLG-S 939
G N ERLE +GDSFLK A T ++ PN E R + N NL+ + ++ L
Sbjct: 1080 GANYERLELLGDSFLKMATTIAVFTLIPNKDEFDYHCERMVMICNQNLFGVAKSDDLKLH 1139
Query: 940 RMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCFIPYNLITQHSI 999
I SK W P KL K ++ + + + +H +
Sbjct: 1140 EYIRSKSFERGTWYPVL---------KLEFG----KTHLKTLKQ----------MDEHRL 1176
Query: 1000 PDKSIADCVEALIGA 1014
DKSIAD EALIGA
Sbjct: 1177 ADKSIADVCEALIGA 1191
>UniRef50_A7BCY7 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 240
Score = 45.2 bits (102), Expect = 0.010
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 865 SPSVILQALTMSNAND--GI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSK 921
+P + L + S AN+ GI N ERLE +GDS L I LY +P+V E LS MR+
Sbjct: 28 APLLQLALVHRSYANEAGGIANNERLEFLGDSVLSIVIAQKLYEQYPDVAESDLSRMRAA 87
Query: 922 QVSNLNLYRLGRNKQLGSRMIASKFE 947
VS L R LG + K E
Sbjct: 88 TVSQQPLAAAARRIGLGDFVFLGKGE 113
>UniRef50_A6GP51 Cluster: Ribonuclease III; n=1; Limnobacter sp.
MED105|Rep: Ribonuclease III - Limnobacter sp. MED105
Length = 226
Score = 44.8 bits (101), Expect = 0.013
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRN 934
ERLE +GDS L A + L+ HP++ EGK+S +RS V L +GRN
Sbjct: 26 ERLEFLGDSVLNCAASILLFETHPDMDEGKMSRVRSHLVKQDCLAMVGRN 75
>UniRef50_Q55FS1 Cluster: Putative RNase III; n=1; Dictyostelium
discoideum AX4|Rep: Putative RNase III - Dictyostelium
discoideum AX4
Length = 1389
Score = 44.8 bits (101), Expect = 0.013
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGR 933
+RLE VGD+ L F ++ +LY P EG+L+ RS+ V N NL + R
Sbjct: 1254 QRLEYVGDAVLDFFVSDFLYATFPLAQEGQLTDYRSRLVRNSNLSSISR 1302
Score = 41.5 bits (93), Expect = 0.13
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
+RLE +GDS LK T YL+ +P + EG LS RS N +L L +K+LG I
Sbjct: 1099 QRLEFLGDSVLKLVSTIYLFFKYPKMSEGFLSQTRSDFTKNDHL--LDVSKRLGLEEIL- 1155
Query: 945 KFEPHDNWLPP 955
+F + + P
Sbjct: 1156 RFTTEEEFRKP 1166
>UniRef50_Q3SE71 Cluster: Ribonuclease with two RNaseIII domains;
n=2; Paramecium tetraurelia|Rep: Ribonuclease with two
RNaseIII domains - Paramecium tetraurelia
Length = 632
Score = 44.8 bits (101), Expect = 0.013
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLN 927
V+ +A+ S++N N E LE +GDS LK+ +T ++ + + EG+++ +RS+ + N
Sbjct: 343 VVEEAIVTSSSNFKRNYENLELLGDSVLKYVVTVDIFRQYELLDEGEMTSLRSRLIMNTF 402
Query: 928 LYRL 931
L +L
Sbjct: 403 LAQL 406
>UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus
hydrogenoformans Z-2901|Rep: Ribonuclease 3 -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 235
Score = 44.8 bits (101), Expect = 0.013
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 865 SPSVILQALT-----MSNANDGI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHM 918
+PS++L A+T + +GI + ERLE +GD+ L+ I+ YL+ P EG L+ +
Sbjct: 19 NPSILLSAITHPSYAFEHPEEGIEHNERLEFLGDAVLELFISDYLFRTFPQKSEGDLTKL 78
Query: 919 RSKQVSNLNLYRL 931
RS+ V +LY L
Sbjct: 79 RSRLVCAESLYEL 91
>UniRef50_A7B5M4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 252
Score = 44.4 bits (100), Expect = 0.018
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L+ + +L+ P V EGKL+ R+ V +L R +LGS ++
Sbjct: 67 ERLEFLGDAVLELVSSEFLFLESPKVSEGKLTKTRASMVCEPSLAFCAREIELGSYLLLG 126
Query: 945 KFE 947
K E
Sbjct: 127 KGE 129
>UniRef50_A3LS79 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 566
Score = 44.4 bits (100), Expect = 0.018
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 869 ILQALTMSNANDGINL--ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
++ T + ND IN ERLE +GDS L +T +Y P+ EGKL+ MRS+ + N
Sbjct: 223 VVNGKTYLDQNDLINSHNERLEFLGDSVLNNLVTLIIYDKFPSASEGKLTKMRSQLIDNH 282
Query: 927 NL 928
L
Sbjct: 283 TL 284
>UniRef50_Q83I82 Cluster: Ribonuclease 3; n=3; Tropheryma
whipplei|Rep: Ribonuclease 3 - Tropheryma whipplei
(strain TW08/27) (Whipple's bacillus)
Length = 223
Score = 44.4 bits (100), Expect = 0.018
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
N ERLE +GD+ L ++ YL+ P EG+LS RS VS ++ ++ + LG M+
Sbjct: 39 NNERLEFLGDAVLGLVVSHYLFETCPEYTEGQLSAARSYIVSGTSIAQIAKELNLGQFML 98
Query: 943 ASKFE 947
K E
Sbjct: 99 LGKGE 103
>UniRef50_Q7MU11 Cluster: Ribonuclease III; n=1; Porphyromonas
gingivalis|Rep: Ribonuclease III - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 237
Score = 44.0 bits (99), Expect = 0.024
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 882 INLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRS----KQVSNL 926
+N ERLE +GDS L AI+ YLY HP+ EG +S RS +Q++N+
Sbjct: 35 LNNERLEFLGDSVLATAISGYLYRQHPHWDEGDMSQRRSAIVKRQINNV 83
>UniRef50_Q2RJX2 Cluster: Ribonuclease III; n=1; Moorella
thermoacetica ATCC 39073|Rep: Ribonuclease III -
Moorella thermoacetica (strain ATCC 39073)
Length = 233
Score = 44.0 bits (99), Expect = 0.024
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
+RLE +GD+ L + YLY P + EG L+ MR+ V +L ++ R ++G +
Sbjct: 46 QRLEFLGDAVLGLVVATYLYQHFPQLPEGDLTRMRAAVVCEASLVKVARRLRVGDLLRLG 105
Query: 945 KFEPH 949
+ E H
Sbjct: 106 QGEEH 110
>UniRef50_Q26GJ2 Cluster: Ribonuclease III (Rnase III),
double-stranded RNA binding motif; n=14;
Bacteroidetes|Rep: Ribonuclease III (Rnase III),
double-stranded RNA binding motif - Flavobacteria
bacterium BBFL7
Length = 246
Score = 44.0 bits (99), Expect = 0.024
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 871 QALTMSNANDG-INLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLY 929
+++++ +A+ I+ ERLE +GD+ L I Y+Y P+ EG L+ MRSK VS +L
Sbjct: 44 KSMSLKDADGNPISYERLEFLGDAILGSVIAEYIYNEVPHGDEGYLTKMRSKIVSREHLN 103
Query: 930 RLG 932
LG
Sbjct: 104 ELG 106
>UniRef50_A4XJW5 Cluster: Ribonuclease III; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Ribonuclease III - Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903)
Length = 224
Score = 44.0 bits (99), Expect = 0.024
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 860 GHPGPSPSVILQALTMSNA--NDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSH 917
G+ +P+++ ALT +A +D ERLE +GD+ L+ ++ YL+ P + EG+L++
Sbjct: 9 GYRFKNPNLLKLALTHKSATHDDKSCYERLEFLGDAVLELVVSKYLFEHFPQLSEGELTN 68
Query: 918 MRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNW 952
+R+ V + L ++ L ++ K E + +
Sbjct: 69 LRATIVCSETLSKVAETLNLKRYIVFGKNEKKEGF 103
>UniRef50_Q556G5 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 1203
Score = 44.0 bits (99), Expect = 0.024
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 877 NANDGINL-ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYR-LGRN 934
N N+ N ERLE +GD+ L F + YL+ + EG L+ +SK V+N NL + L N
Sbjct: 1093 NNNNNTNFSERLEFLGDAVLDFIVADYLFSKYKEQQEGYLTESKSKLVNNENLSKILKSN 1152
Query: 935 KQLGS 939
K + S
Sbjct: 1153 KNIFS 1157
>UniRef50_Q6ANV0 Cluster: Ribonuclease 3; n=1; Desulfotalea
psychrophila|Rep: Ribonuclease 3 - Desulfotalea
psychrophila
Length = 241
Score = 44.0 bits (99), Expect = 0.024
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
++I + A G N ERLE VGD+ L + LY P + EG+L+ +R+ V+
Sbjct: 36 ALIHSSYAFEQAQAGKNNERLEFVGDAVLDLVVGNALYRRFPEMREGELTRLRAALVNEG 95
Query: 927 NLYRLGRNKQLGSRMIASKFE 947
+L + R LG + K E
Sbjct: 96 HLATMARKINLGYFLCLGKGE 116
>UniRef50_Q1DW80 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)]; n=2; Coccidioides
immitis|Rep: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)] - Coccidioides immitis
Length = 1478
Score = 44.0 bits (99), Expect = 0.024
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
S++L A++ S A + N +RLE +GDS LK + L HP EG+L+ + VSN
Sbjct: 1016 SLVLTAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSN 1074
>UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usitatus
Ellin6076|Rep: Ribonuclease III - Solibacter usitatus
(strain Ellin6076)
Length = 271
Score = 43.6 bits (98), Expect = 0.031
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
E+LE +GDS L F I L P HEG LS +++ VS +L+ + R LGS +
Sbjct: 49 EQLEFLGDSVLGFLIAEALVRRFPEYHEGDLSRLKAHLVSAAHLHGVARRLDLGSYLELG 108
Query: 945 KFE 947
+ E
Sbjct: 109 RSE 111
>UniRef50_A0DYG6 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 822
Score = 43.6 bits (98), Expect = 0.031
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 863 GPSPSVILQ-ALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSK 921
G P++ +Q A++ ++ N IN E LET+GDS LK+ T + N +E LS RS+
Sbjct: 361 GIEPNLRVQRAISRASYNRDINYELLETLGDSILKYLATVSVSLGPQNTNENILSDQRSQ 420
Query: 922 QVSN 925
V+N
Sbjct: 421 IVNN 424
>UniRef50_Q0UL22 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)]; n=1; Phaeosphaeria
nodorum|Rep: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)] - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 1399
Score = 43.6 bits (98), Expect = 0.031
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLN 927
++ +AL S A+ N +RLE +GD LKF T +L A+P E L+ + + VSN
Sbjct: 930 LLTRALKSSAADGNDNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGF 989
Query: 928 LYRLGRNKQLGSRMIASKFEPHDNWLP 954
L R L MI F W P
Sbjct: 990 LARATIAAGLDRFMITKSF-TGAKWAP 1015
>UniRef50_Q4AEV8 Cluster: Ribonuclease III; n=1; Chlorobium
phaeobacteroides BS1|Rep: Ribonuclease III - Chlorobium
phaeobacteroides BS1
Length = 208
Score = 43.2 bits (97), Expect = 0.041
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 882 INLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRL 931
+N ERLE +GD+ L + YL+ P +EG L+ MRSK VS +L +L
Sbjct: 21 LNNERLEYLGDAILSAVVADYLFKRFPYKNEGFLTEMRSKIVSRTSLNKL 70
>UniRef50_A4A3U5 Cluster: Ribonuclease III; n=1; Congregibacter
litoralis KT71|Rep: Ribonuclease III - Congregibacter
litoralis KT71
Length = 224
Score = 43.2 bits (97), Expect = 0.041
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
N ERLE +GDS L + ++ LY P+ EG+LS +R V L + R LG ++
Sbjct: 34 NNERLEFLGDSVLGYVVSEELYRRFPDADEGQLSRLRVSLVKGSALAEVAREITLGEQLR 93
Query: 943 ASKFEPH 949
E H
Sbjct: 94 LGVGERH 100
>UniRef50_A1WT17 Cluster: Ribonuclease III; n=2;
Gammaproteobacteria|Rep: Ribonuclease III -
Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 234
Score = 43.2 bits (97), Expect = 0.041
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 871 QALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYR 930
+A+T +A G + ERLE +GDS L F + ++ P EG LS +R+ V+ +L
Sbjct: 23 EAVTHRSAG-GRHNERLEFLGDSVLNFVVAHEVFHRRPTDSEGTLSRLRASLVNRSSLAA 81
Query: 931 LGRNKQLGSRM 941
+ R+ +LG +
Sbjct: 82 IARDIELGDHL 92
>UniRef50_Q67PF5 Cluster: Ribonuclease 3; n=1; Symbiobacterium
thermophilum|Rep: Ribonuclease 3 - Symbiobacterium
thermophilum
Length = 235
Score = 43.2 bits (97), Expect = 0.041
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 860 GHPGPSPSVILQALTMSN-ANDGINL---ERLETVGDSFLKFAITAYLYCAHPNVHEGKL 915
G+ S++L+ALT + AN+ ERLE +GDS L I A+LY +P++ EG+L
Sbjct: 19 GYEFRDESLLLEALTHTTYANEHPRARANERLEFLGDSVLGMVIAAHLYERYPDLPEGEL 78
Query: 916 SHMRSKQVSNLNLYRLGRNKQLGSRM 941
+ +R+ V +L R +G M
Sbjct: 79 TKIRAAVVCEPSLAERARVLGIGRHM 104
>UniRef50_Q3A4Q8 Cluster: Ribonuclease 3; n=1; Pelobacter
carbinolicus DSM 2380|Rep: Ribonuclease 3 - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 232
Score = 43.2 bits (97), Expect = 0.041
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L ++ Y++ P++ EG+L+ +RS+ VS L +G+ LG M
Sbjct: 46 ERLEFLGDAVLGVVVSHYIFRTFPHLPEGELTRIRSEVVSEKGLTVIGKAICLGDYMRLG 105
Query: 945 KFE 947
K E
Sbjct: 106 KGE 108
>UniRef50_Q820I0 Cluster: Ribonuclease 3; n=4; Proteobacteria|Rep:
Ribonuclease 3 - Nitrosomonas europaea
Length = 245
Score = 43.2 bits (97), Expect = 0.041
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 860 GHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMR 919
G+ P ++ +ALT + N ER E +GDS L A++ L+ P++ EG L+ +R
Sbjct: 32 GYTFKQPDLLREALTHRSLGFPNN-ERFEFLGDSVLNCAVSTLLFKRFPSLPEGDLTRLR 90
Query: 920 SKQVSNLNLYRLGRNKQLGSRMIASKFE 947
+ V+ L+RL +G ++ + E
Sbjct: 91 ANFVNQQALHRLASALGIGELILLGEGE 118
>UniRef50_P75233 Cluster: Ribonuclease 3; n=3; Mycoplasma|Rep:
Ribonuclease 3 - Mycoplasma pneumoniae
Length = 282
Score = 43.2 bits (97), Expect = 0.041
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 877 NANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQ 936
N + + +RLE +GD+ + F + L+ +PN +EG L+ + + V NL R+G+
Sbjct: 48 NEDARASYDRLEFLGDALIDFIVAKKLFELYPNYNEGMLTRTKIEIVKGENLNRIGKELN 107
Query: 937 LGSRMIASKFEPHDNWL 953
G+ + K P+ L
Sbjct: 108 FGNFIKLGKGMPYTETL 124
>UniRef50_Q5FJJ7 Cluster: Ribonuclease 3; n=8; Lactobacillus|Rep:
Ribonuclease 3 - Lactobacillus acidophilus
Length = 228
Score = 43.2 bits (97), Expect = 0.041
Identities = 20/46 (43%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 879 NDGI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQV 923
+DGI + E+LE +GD+ L+ A++ YLY +P ++EG+L+ +RS V
Sbjct: 39 DDGIRDYEKLEFLGDAVLELAVSNYLYRHYPKLNEGELTRLRSNIV 84
>UniRef50_P51837 Cluster: Ribonuclease 3; n=5;
Gammaproteobacteria|Rep: Ribonuclease 3 - Coxiella
burnetii
Length = 233
Score = 43.2 bits (97), Expect = 0.041
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 870 LQALTMSNANDGI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
L + +++ + G N ERLE +GDS L F I + LY P EG LS MR+ V+ L
Sbjct: 20 LLKIALTHCSSGADNNERLEFLGDSVLGFIIASELYQRRPQAREGDLSRMRASMVNGDEL 79
Query: 929 YRL 931
++
Sbjct: 80 AQM 82
>UniRef50_Q9S338 Cluster: Ribonuclease III; n=1; Prochlorococcus
marinus|Rep: Ribonuclease III - Prochlorococcus marinus
Length = 249
Score = 42.7 bits (96), Expect = 0.054
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLN 927
++ +ALT ++ N IN ERLE GD+ L+ A + Y+ P + G S +R++ VS+
Sbjct: 45 ILNEALTHTSFNLSINHERLEFQGDAVLRLAASEYIQSHFPKLSVGDRSALRAQLVSDRW 104
Query: 928 LYRLGRNKQLGSRM-IASK 945
L ++G + + M IA+K
Sbjct: 105 LAKVGYKIGIKTTMLIANK 123
>UniRef50_Q2LVR4 Cluster: Ribonuclease III; n=1; Syntrophus
aciditrophicus SB|Rep: Ribonuclease III - Syntrophus
aciditrophicus (strain SB)
Length = 240
Score = 42.7 bits (96), Expect = 0.054
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L+ I+ L A P+ EG+LS +R+ V+ L L + ++GS ++
Sbjct: 48 ERLEFLGDAVLELCISDLLMKAFPDYSEGQLSKLRASVVNEQPLAELAKKCRIGSFILLG 107
Query: 945 KFE 947
K E
Sbjct: 108 KGE 110
>UniRef50_Q7R2M2 Cluster: GLP_546_48378_50642; n=2; Giardia
intestinalis|Rep: GLP_546_48378_50642 - Giardia lamblia
ATCC 50803
Length = 754
Score = 42.7 bits (96), Expect = 0.054
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRL 931
++LE +GD+FLK ++ +L+ HP + EG L+ MR +N L RL
Sbjct: 646 QKLELLGDAFLKCSLALHLHALHPTLTEGALTRMRQSAETNSVLGRL 692
Score = 35.5 bits (78), Expect = 8.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+RLE +GD+ L F +TA L C P+ G L ++ + V N
Sbjct: 333 QRLELLGDAVLGFIVTARLLCLFPDASVGTLVELKMELVRN 373
>UniRef50_Q3SD86 Cluster: Dicer-like ribonuclease with helicase and
Rnase III domains; n=1; Paramecium tetraurelia|Rep:
Dicer-like ribonuclease with helicase and Rnase III
domains - Paramecium tetraurelia
Length = 1797
Score = 42.7 bits (96), Expect = 0.054
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 877 NANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQ 936
N +D N + LE +GD+ LK + ++ P +E L R++ VSN NL + +
Sbjct: 1317 NQDDQTNYQVLEFLGDANLKLLSSIEVFVQFPFANEHLLHLERARIVSNENLRKFSIIHR 1376
Query: 937 LGSRMIASKFE--PHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCFIPYNLI 994
+ + + F+ P + L + +QP+ ++ + + V +P N
Sbjct: 1377 FFNCIKCTNFDYSPPEFLLDKNTQELSEIQPEKQKENKENTKYQYTQNGEVITELPKN-- 1434
Query: 995 TQHSIPDKSIADCVEALIGAYLLECGP--RGALLFMSWLGIAVLPRHLAALPHTHSTSEQ 1052
IP+K +D VEAL GA+L++ F+ +G+ P LA + +ST+ Q
Sbjct: 1435 -YQPIPEKVHSDVVEALNGAFLIQYDEDINACQFFLHRIGVLKYP--LAQVKLKNSTTLQ 1491
>UniRef50_Q72C44 Cluster: Ribonuclease 3; n=4;
Desulfovibrionaceae|Rep: Ribonuclease 3 - Desulfovibrio
vulgaris (strain Hildenborough / ATCC 29579 / NCIMB8303)
Length = 253
Score = 42.7 bits (96), Expect = 0.054
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 860 GHPGPSPSVILQALTMSN-ANDGI----NLERLETVGDSFLKFAITAYLYCAHPNVHEGK 914
GH ++L A+T S+ AN+ + ERLE +GD+ L+ ++ L+ P+ EG
Sbjct: 37 GHRFGDMELLLTAMTHSSWANEQAVPVEHNERLEFLGDAVLELCVSEELFRRFPSAREGD 96
Query: 915 LSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFE 947
L+ MRS+ VS +L + R +L + K E
Sbjct: 97 LTRMRSRLVSKPSLEGVARELRLDMSLRLGKGE 129
>UniRef50_UPI00015B6129 Cluster: PREDICTED: similar to ribonuclease
iii; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
ribonuclease iii - Nasonia vitripennis
Length = 1381
Score = 42.3 bits (95), Expect = 0.072
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 871 QALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+++ +N G N +RLE +GD+ L+ ++ YLY P HEG LS +RS V+N
Sbjct: 1044 RSIGYTNLTLGSN-QRLEFLGDTVLQLIVSEYLYKFFPEHHEGHLSLLRSSLVNN 1097
Score = 36.7 bits (81), Expect = 3.6
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
ERLE +GD+ ++F + +L+ P++ EG L+ R+ V N +L L + L M+
Sbjct: 878 ERLEFLGDAVVEFLTSIHLFHMFPDLEEGGLATYRAAIVQNQHLAVLAKKLNLEQYML 935
>UniRef50_Q0F3I4 Cluster: Ribonuclease III; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ribonuclease III - Mariprofundus
ferrooxydans PV-1
Length = 229
Score = 42.3 bits (95), Expect = 0.072
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 860 GHPGPSPSVILQALTMSNANDGI---NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLS 916
G+ +P+++ +ALT +A +LERLE +GD+ L + YL+ + P EG+LS
Sbjct: 16 GYRFNNPALLKRALTHCSALRSAVSGDLERLEFLGDAVLGLVVAEYLHQSFPEEPEGQLS 75
Query: 917 HMRSKQVSNLNLYRLGRNKQLGSRMIASKFE 947
MR+ V +L + + +L + +I E
Sbjct: 76 RMRANLVCRDSLLVVASDWRLSACLIVGDGE 106
>UniRef50_Q8CPI1 Cluster: Ribonuclease 3; n=16; Staphylococcus|Rep:
Ribonuclease 3 - Staphylococcus epidermidis (strain ATCC
12228)
Length = 245
Score = 42.3 bits (95), Expect = 0.072
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L+ ++ YL+ HP++ EG L+ MR+ V +L +L ++
Sbjct: 56 ERLEFLGDAVLELTVSRYLFDRHPHLPEGNLTKMRATIVCEPSLVIFANKIKLNELILLG 115
Query: 945 KFE 947
K E
Sbjct: 116 KGE 118
>UniRef50_Q9KA05 Cluster: Ribonuclease 3; n=38; Bacilli|Rep:
Ribonuclease 3 - Bacillus halodurans
Length = 263
Score = 42.3 bits (95), Expect = 0.072
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L+ A++ YLY A + EG ++ +R+ V +L +L G ++
Sbjct: 74 ERLEFLGDAVLELAVSQYLYKAFEQMSEGDMTKLRASIVCEPSLAQLAEELHFGELVLLG 133
Query: 945 KFE 947
K E
Sbjct: 134 KGE 136
>UniRef50_Q98514 Cluster: Putative protein A464R; n=6;
Chlorovirus|Rep: Putative protein A464R - Paramecium
bursaria Chlorella virus 1 (PBCV-1)
Length = 275
Score = 42.3 bits (95), Expect = 0.072
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ER+E VGDS L F I YLY P EG LS +R+K VS L + L + +I
Sbjct: 85 ERMEFVGDSVLGFIIARYLYDNFPGKDEGFLSRLRTKFVSGKFLSSIALRMGLHNYVIMH 144
Query: 945 KFEPHDNW 952
+ + W
Sbjct: 145 QKGLYRGW 152
>UniRef50_Q1Q4S0 Cluster: Similar to ribonuclease III; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
ribonuclease III - Candidatus Kuenenia stuttgartiensis
Length = 236
Score = 41.9 bits (94), Expect = 0.095
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 874 TMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGR 933
T + + ERLE +GD+ L I+ YLY P+ EG+L++++S VS L ++G
Sbjct: 37 TSCRVENNFSNERLEFLGDAVLGMIISDYLYKTMPHYSEGELTNVKSVVVSQSTLAKVGM 96
Query: 934 NKQLGSRMIASK 945
L ++ +
Sbjct: 97 EAGLKEFLLVGR 108
>UniRef50_Q0AYW0 Cluster: Ribonuclease III; n=1; Syntrophomonas
wolfei subsp. wolfei str. Goettingen|Rep: Ribonuclease
III - Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 233
Score = 41.9 bits (94), Expect = 0.095
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 862 PGPSPSVILQALT----MSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSH 917
P S +I ALT N N +RLE +GD+ L + YLY + EG+L+
Sbjct: 18 PYSSNELITMALTHPSYAQEKNTVANNQRLEFLGDAVLNLVVAEYLYNHYGRKAEGELTK 77
Query: 918 MRSKQVSNLNLYRLGRNKQLGSRMIASKFE 947
+R+K V L RN LG ++ + E
Sbjct: 78 IRAKVVCEDALAIFARNINLGQYLLLGRGE 107
>UniRef50_A3EQH6 Cluster: DsRNA-specific ribonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: DsRNA-specific
ribonuclease - Leptospirillum sp. Group II UBA
Length = 377
Score = 41.9 bits (94), Expect = 0.095
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
N ERLE +GD + ++ YL P+ EG + + S VS L + R LGS MI
Sbjct: 56 NYERLEFLGDRVIGLIVSEYLLNTWPSASEGDIGQIFSGIVSTQTLASIARRMDLGSYMI 115
Query: 943 ASK 945
K
Sbjct: 116 LGK 118
>UniRef50_Q6FJM4 Cluster: Candida glabrata strain CBS138 chromosome
M complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome M complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 449
Score = 41.9 bits (94), Expect = 0.095
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
N ERLE +GDS L +T +Y P+++EG L+ +R K V N L
Sbjct: 213 NNERLEFLGDSILNTVMTMIIYNKFPSLNEGNLTELRKKLVKNETL 258
>UniRef50_A7EYF3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1515
Score = 41.9 bits (94), Expect = 0.095
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLN 927
++ A+T ++ + N +RLE +GDS LK + L +P EG LS M+ + VSN
Sbjct: 1018 LVQTAITHASYSLTSNYQRLEFLGDSILKLCTSVQLISEYPLWPEGYLSAMKDRIVSNSR 1077
Query: 928 LYRLGRNKQLGSRMIASKFEPHDNWLP 954
R L +I KF W P
Sbjct: 1078 SSRAAVELGLDEYIITKKF-TGSKWRP 1103
>UniRef50_A5UJK3 Cluster: Ribonuclease III (DsRNA-specific), Rnc;
n=1; Methanobrevibacter smithii ATCC 35061|Rep:
Ribonuclease III (DsRNA-specific), Rnc -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 223
Score = 41.9 bits (94), Expect = 0.095
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL----YRLGRNKQL 937
ERLE +GDS L ++ YLY +P+ EGKL+ +R+ V L + LG +K +
Sbjct: 37 ERLEFLGDSVLNMIVSEYLYKQYPDYEEGKLTKLRANYVCQTALIYYSHELGLDKHI 93
>UniRef50_Q6KHN3 Cluster: Ribonuclease 3; n=1; Mycoplasma
mobile|Rep: Ribonuclease 3 - Mycoplasma mobile
Length = 246
Score = 41.9 bits (94), Expect = 0.095
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 870 LQALTMSN-ANDGINLER---LETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+QALT AN+ N+E LE +GD+ L+ + +++ N+ EG+ S +R+K V +
Sbjct: 28 IQALTHKTYANEHANIESYDILEFIGDAILQMKSSIFIFQHFQNITEGEASLIRAKNVCS 87
Query: 926 LNLYRLGRNKQLGSRMIASKFEPH 949
L L + L ++ SK H
Sbjct: 88 SGLSELSKKLGLSKLLLISKGSEH 111
>UniRef50_A1HN82 Cluster: Ribonuclease III; n=4; Clostridia|Rep:
Ribonuclease III - Thermosinus carboxydivorans Nor1
Length = 243
Score = 41.5 bits (93), Expect = 0.13
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L+ I+ YLY P + EG+L+ R++ V +L + LG ++
Sbjct: 51 ERLEFLGDAVLELIISEYLYRNFPELPEGELTKARARLVCEPSLAQCASRLGLGKYLLLG 110
Query: 945 KFE 947
K E
Sbjct: 111 KGE 113
>UniRef50_A0LGM1 Cluster: Ribonuclease III; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: Ribonuclease III -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 242
Score = 41.5 bits (93), Expect = 0.13
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
E LE +GD+ L AI+ +L P+ +EG+LS +RS V+ L R+ LG ++
Sbjct: 46 ETLEFLGDAVLGLAISHFLLEQFPDYNEGELSRLRSAIVNERELTRIAVELNLGEYLLLG 105
Query: 945 KFE 947
K E
Sbjct: 106 KGE 108
>UniRef50_A6QZ52 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1359
Score = 41.5 bits (93), Expect = 0.13
Identities = 44/140 (31%), Positives = 56/140 (40%), Gaps = 25/140 (17%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSR 940
G N ERLE +GD FLK A + L+ +P+ E R + N NL+ +L
Sbjct: 931 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEF 990
Query: 941 MIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCFIPYNLITQHSIP 1000
+ F NW P E LQ K KQ ++
Sbjct: 991 VRTQGFS-RRNWYP---EGIKLLQGKAQPESAQNKQ---------------------ALG 1025
Query: 1001 DKSIADCVEALIGAYLLECG 1020
DK+IAD EALIGA LL G
Sbjct: 1026 DKTIADICEALIGASLLSGG 1045
>UniRef50_Q8Z023 Cluster: Ribonuclease 3; n=6; Cyanobacteria|Rep:
Ribonuclease 3 - Anabaena sp. (strain PCC 7120)
Length = 228
Score = 41.5 bits (93), Expect = 0.13
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 877 NANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQ 936
N +G + ERLE +GD+ L F YLY +HP+ E +L+ RS V L +
Sbjct: 26 NPEEGEHNERLEFLGDAILNFLSGEYLYRSHPDRGEDELTRRRSALVDEKQLAKFAIEVG 85
Query: 937 LGSRMIASK 945
L +M K
Sbjct: 86 LDFKMRLGK 94
>UniRef50_P22192 Cluster: Double-strand-specific pac1 ribonuclease;
n=2; Schizosaccharomyces pombe|Rep:
Double-strand-specific pac1 ribonuclease -
Schizosaccharomyces pombe (Fission yeast)
Length = 363
Score = 41.5 bits (93), Expect = 0.13
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 876 SNANDGINL--ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGR 933
SN N+ +++ ERLE +GDSF T ++ P + EG LS +R+K V N + + R
Sbjct: 161 SNPNELLDIHNERLEFLGDSFFNLFTTRIIFSKFPQMDEGSLSKLRAKFVGNESADKFAR 220
>UniRef50_Q1IJU6 Cluster: Ribonuclease III; n=1; Acidobacteria
bacterium Ellin345|Rep: Ribonuclease III - Acidobacteria
bacterium (strain Ellin345)
Length = 258
Score = 41.1 bits (92), Expect = 0.17
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLG 938
E+LE +GDS L F + L P+ EG+LS +R+ VS +L + RN LG
Sbjct: 51 EQLEFIGDSVLAFVTSQELVKKFPHFQEGELSKLRAYLVSARHLIQTARNLDLG 104
>UniRef50_A6EDW5 Cluster: Ribonuclease III; n=1; Pedobacter sp.
BAL39|Rep: Ribonuclease III - Pedobacter sp. BAL39
Length = 242
Score = 41.1 bits (92), Expect = 0.17
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 872 ALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRL 931
A + N + N ERLE +GD+ L + L+ +P EG L+ MRSK V+ NL +L
Sbjct: 45 AKVLKNGSRSSN-ERLEFLGDAILGSVVAELLFKNYPYKEEGFLTEMRSKIVNRANLNQL 103
Query: 932 GR 933
R
Sbjct: 104 AR 105
>UniRef50_A6DSV3 Cluster: Ribonuclease III; n=1; Lentisphaera
araneosa HTCC2155|Rep: Ribonuclease III - Lentisphaera
araneosa HTCC2155
Length = 232
Score = 41.1 bits (92), Expect = 0.17
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
+RLE +GD+ ++ ++ YL+ +P+ EG L+ R+ V L+ ++ +LG ++
Sbjct: 43 QRLEFLGDAVIELIVSRYLFDRYPDAPEGDLTKYRAALVKESALFECAKSIKLGKYLLLG 102
Query: 945 KFE 947
K E
Sbjct: 103 KSE 105
>UniRef50_Q5KEY8 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 418
Score = 41.1 bits (92), Expect = 0.17
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
E+LE VGD+ L +T L+ +PN++ G + M++ V N L +L R ++ R+I
Sbjct: 188 EKLEHVGDALLGCIVTCLLHDLYPNLNPGNATEMKAICVCNQTLSQLSRRYKMPERLI 245
>UniRef50_Q5A694 Cluster: Probable ribonuclease III; n=2; Candida
albicans|Rep: Probable ribonuclease III - Candida
albicans (Yeast)
Length = 611
Score = 41.1 bits (92), Expect = 0.17
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL----YRLGRNKQLGSR 940
ERLE GDS L T ++ P+ EG LS +RSK VSN L ++ G +K+L SR
Sbjct: 275 ERLEFYGDSILNNLATLIIFKEFPDSTEGDLSKIRSKLVSNKTLIKIAFQYGFDKKLRSR 334
Query: 941 M 941
+
Sbjct: 335 I 335
>UniRef50_A7TR32 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 558
Score = 41.1 bits (92), Expect = 0.17
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLY 929
ERLE +GDS+L ++ +Y P+ +EG LS M+ V+N NL+
Sbjct: 144 ERLEFLGDSWLGALVSYIVYTRFPSANEGMLSQMKESIVNNNNLF 188
>UniRef50_Q53844 Cluster: Ribonuclease 3; n=2; Spiroplasma
citri|Rep: Ribonuclease 3 - Spiroplasma citri
Length = 248
Score = 41.1 bits (92), Expect = 0.17
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 870 LQALTMSNANDGINL----ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
L+ALT ++ + NL +R+E +GD+ L I+ YL+ + P+ +EG+++++RSK V
Sbjct: 33 LEALTHNSYANEHNLSYTYQRMEFLGDAILAKEISLYLFLSFPDKNEGEITNLRSKIVRE 92
Query: 926 LNLYRLGRNKQLGSRMIASKFE 947
L L R ++ K E
Sbjct: 93 GTLAELVRRMNWAPFLLLGKGE 114
>UniRef50_Q8RGX3 Cluster: Ribonuclease 3; n=3; Fusobacterium
nucleatum|Rep: Ribonuclease 3 - Fusobacterium nucleatum
subsp. nucleatum
Length = 234
Score = 41.1 bits (92), Expect = 0.17
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L + YLY ++ N EG ++ +++ VS L ++ R +G ++ S
Sbjct: 43 ERLELLGDAVLDLIVAEYLYKSYKNASEGPIAKLKAMIVSEPILAKISRQIGVGKFLMLS 102
Query: 945 KFE 947
+ E
Sbjct: 103 RGE 105
>UniRef50_A2QX45 Cluster: Dicer-like protein 2-2 [Includes:
Endoribonuclease dcl2-2 (EC 3.1.26.-); ATP-dependent
helicase dcl2-2 (EC 3.6.1.-)]; n=2; Aspergillus
niger|Rep: Dicer-like protein 2-2 [Includes:
Endoribonuclease dcl2-2 (EC 3.1.26.-); ATP-dependent
helicase dcl2-2 (EC 3.6.1.-)] - Aspergillus niger
Length = 1362
Score = 41.1 bits (92), Expect = 0.17
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 887 LETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKF 946
L +GD+F+K+ L+ H HEG LS ++ + +S+ L LG + + SK
Sbjct: 928 LAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLG-KFLISKH 986
Query: 947 EPHDNWLPP 955
W+PP
Sbjct: 987 LNGKRWVPP 995
>UniRef50_Q0UI93 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)]; n=1; Phaeosphaeria
nodorum|Rep: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)] - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 1522
Score = 41.1 bits (92), Expect = 0.17
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 20/138 (14%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSR 940
G N ERLE +GD FLK A + ++ P +E + R + N NL K+ +
Sbjct: 1047 GPNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQNLMETAVGKKKLYK 1106
Query: 941 MIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCFIPYNLITQHSIP 1000
+ + NW P KL L G+ K+ + L H++
Sbjct: 1107 YVRTDAFSRRNWYPE--------GLKL-LRGKGLKKTEEDW-----------LNVTHNLG 1146
Query: 1001 DKSIADCVEALIGAYLLE 1018
DKS+AD EA IGA ++
Sbjct: 1147 DKSVADVCEAFIGAAFMQ 1164
>UniRef50_Q6BCJ9 Cluster: Dicer-related RNase III protein Dcr2p; n=2;
Tetrahymena thermophila|Rep: Dicer-related RNase III
protein Dcr2p - Tetrahymena thermophila
Length = 1838
Score = 40.7 bits (91), Expect = 0.22
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 870 LQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLY 929
L +L + N +LER E +GD+ LK + +Y HP E L R+ + N NL
Sbjct: 1313 LTSLEYAVNNKESSLERYEFLGDTVLKCLSSTQIYFEHPKSMEDHLHVHRTIIIQNRNLA 1372
Query: 930 RLGRNKQLGSRMIASKFE 947
++ K++ +++SK E
Sbjct: 1373 QIAVKKKIFKYILSSKIE 1390
Score = 36.3 bits (80), Expect = 4.7
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
+RLE +GD+ L I YL+ PN G+L+ M++ V N L
Sbjct: 1623 QRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTL 1666
>UniRef50_A7F817 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1867
Score = 40.7 bits (91), Expect = 0.22
Identities = 44/137 (32%), Positives = 57/137 (41%), Gaps = 27/137 (19%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSR 940
G N ERLE +GD FLK + LY +P+ E + R + N NL+ +L R
Sbjct: 1407 GNNYERLEFLGDCFLKMGTSISLYGLNPDSDEFRYHVDRMCLICNKNLFNTALKLEL-YR 1465
Query: 941 MIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCFIPYNLITQHSIP 1000
I S W P E P L+ K ++P H +
Sbjct: 1466 FIRSAAFNRRAWYP---EGPELLRGK-----------TATAPNT------------HKLG 1499
Query: 1001 DKSIADCVEALIGAYLL 1017
DKSIAD EA+IGA LL
Sbjct: 1500 DKSIADVCEAMIGAALL 1516
>UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|Rep:
Ribonuclease 3 - Zymomonas mobilis
Length = 223
Score = 40.7 bits (91), Expect = 0.22
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 860 GHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMR 919
GH P++ L+A+T + + + +RLE +GD L I +LY P EGKLS
Sbjct: 15 GHRPKDPALFLRAMTHPSHGNS-DYQRLEFLGDRVLGLVIANWLYDLFPREPEGKLSRRL 73
Query: 920 SKQVSNLNLYRLGR 933
+ VS + + R
Sbjct: 74 NSLVSGASCASIAR 87
>UniRef50_Q5F9X7 Cluster: Ribonuclease 3; n=5;
Betaproteobacteria|Rep: Ribonuclease 3 - Neisseria
gonorrhoeae (strain ATCC 700825 / FA 1090)
Length = 239
Score = 40.7 bits (91), Expect = 0.22
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
S++ +ALT + + N ER E VGDS L + + L+ A P + EG+LS +R+ V+
Sbjct: 26 SLLRRALTHRSHHAKHN-ERFEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEG 84
Query: 927 NLYRLGRNKQLG 938
L + +G
Sbjct: 85 VLAEMAAEMNVG 96
>UniRef50_A4RHU9 Cluster: Dicer-like protein 2 [Includes:
Endoribonuclease DCL2 (EC 3.1.26.-); ATP-dependent
helicase DCL2 (EC 3.6.1.-)]; n=3; Magnaporthe grisea|Rep:
Dicer-like protein 2 [Includes: Endoribonuclease DCL2 (EC
3.1.26.-); ATP-dependent helicase DCL2 (EC 3.6.1.-)] -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1485
Score = 40.7 bits (91), Expect = 0.22
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVH--EGKLSHMRSKQVSN 925
+++ +T S+A N ER+E +GD+ LK + A + CA N+H EG LS ++ + VSN
Sbjct: 1007 LVMMVITSSSAGRLTNYERVEFLGDAVLK--LGAAVTCATNNLHFPEGYLSLLKDRLVSN 1064
Query: 926 LNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEP-PPTLQPKLN 968
L + L +I ++ W P PPT K++
Sbjct: 1065 SRLCKAATALGLDQFIITRQYS-LKQWRNMLTAPEPPTNTRKMS 1107
>UniRef50_Q67B98 Cluster: Ribonuclease III-like protein; n=2;
Murinae|Rep: Ribonuclease III-like protein - Rattus
norvegicus (Rat)
Length = 288
Score = 40.3 bits (90), Expect = 0.29
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+R+E +GDS ++ T YL+ P+ HEG L+ +RS V+N
Sbjct: 58 QRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNN 98
>UniRef50_Q1D5X9 Cluster: Ribonuclease III; n=1; Myxococcus xanthus
DK 1622|Rep: Ribonuclease III - Myxococcus xanthus
(strain DK 1622)
Length = 260
Score = 40.3 bits (90), Expect = 0.29
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
+RLE +GDS + A++ L P + EG L+ MR++ V+ L R+ R LG ++
Sbjct: 55 QRLEFLGDSVVNLAVSHRLMARCPGLPEGDLTKMRARVVNEDGLARVARTIPLGDLLLLG 114
Query: 945 KFE 947
+ E
Sbjct: 115 RGE 117
>UniRef50_Q0LPI7 Cluster: Ribonuclease III; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Ribonuclease III -
Herpetosiphon aurantiacus ATCC 23779
Length = 234
Score = 40.3 bits (90), Expect = 0.29
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L F ++L+ P + EG L+ R+ V L L R LGS + S
Sbjct: 42 ERLEFLGDALLNFICGSFLFHEFPELGEGDLTKTRAMLVQTRTLAGLARRFNLGSYVQIS 101
Query: 945 KFE 947
+ E
Sbjct: 102 RGE 104
>UniRef50_A3EU88 Cluster: DsRNA-specific ribonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: DsRNA-specific
ribonuclease - Leptospirillum sp. Group II UBA
Length = 247
Score = 40.3 bits (90), Expect = 0.29
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
N ERLE +GD+ L + YL +P EG LS + + VS L + R +G ++
Sbjct: 45 NNERLEFLGDTVLGLVVAEYLMVTYPKYPEGILSKFKGRVVSEPTLASVSRALGIGGFLL 104
Query: 943 ASKFE 947
K E
Sbjct: 105 IGKGE 109
>UniRef50_A1WMW1 Cluster: Ribonuclease III; n=1; Verminephrobacter
eiseniae EF01-2|Rep: Ribonuclease III -
Verminephrobacter eiseniae (strain EF01-2)
Length = 247
Score = 40.3 bits (90), Expect = 0.29
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 861 HPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRS 920
H P ++ +A T + + N ERLE +GDS L A+++ LY + EG+LS +R+
Sbjct: 14 HVFSDPGLLERATTHRSFSAEHN-ERLEFLGDSVLNLAVSSLLYQRLSALPEGELSRVRA 72
Query: 921 KQVSNLNLYRL 931
V +LY+L
Sbjct: 73 NLVRQESLYQL 83
>UniRef50_Q6CC90 Cluster: Similarities with sp|Q02555 Saccharomyces
cerevisiae RNT1; n=1; Yarrowia lipolytica|Rep:
Similarities with sp|Q02555 Saccharomyces cerevisiae
RNT1 - Yarrowia lipolytica (Candida lipolytica)
Length = 467
Score = 40.3 bits (90), Expect = 0.29
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 832 GNEFKPYYEDDKGGQKREFDFDFQPVLEGHPGPSPSVILQALTMSNANDG-INLERLETV 890
G + P + K G + F + +L G G + V A G + ERLE V
Sbjct: 137 GKSWPPLIPEIKDGMLFKRVFTHRSMLLGDTGTASEVHKTATKAGYDQTGNFSYERLEFV 196
Query: 891 GDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYR 930
GDS + +T +Y P + LS +R + ++N+ L R
Sbjct: 197 GDSIVNNILTKIIYDVFPGDDQSHLSFLRGQVIANIVLCR 236
>UniRef50_Q9NRR4 Cluster: Ribonuclease 3; n=59; Eumetazoa|Rep:
Ribonuclease 3 - Homo sapiens (Human)
Length = 1374
Score = 40.3 bits (90), Expect = 0.29
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
ERLE +GD+ ++F + +LY P++ EG L+ R+ V N +L L + +L M+
Sbjct: 966 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFML 1023
Score = 40.3 bits (90), Expect = 0.29
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+R+E +GDS ++ T YL+ P+ HEG L+ +RS V+N
Sbjct: 1144 QRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNN 1184
>UniRef50_Q8XXI2 Cluster: Putative uncharacterized protein; n=3;
Ralstonia solanacearum|Rep: Putative uncharacterized
protein - Ralstonia solanacearum (Pseudomonas
solanacearum)
Length = 464
Score = 39.9 bits (89), Expect = 0.38
Identities = 25/77 (32%), Positives = 32/77 (41%)
Query: 996 QHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLPRHLAALPHTHSTSEQRET 1055
QHS+PD S A IG + P L + G+ A LP S E
Sbjct: 45 QHSVPDTSANTTTPATIGQASTDRVPTARGLSQAEPGVRARDEQFAVLPRRRSRDENALP 104
Query: 1056 SAEPPPARRRVGSLPPY 1072
S + P A+R SLPP+
Sbjct: 105 SIDQPAAQRPRVSLPPH 121
>UniRef50_Q7NH89 Cluster: Ribonuclease III; n=3; Cyanobacteria|Rep:
Ribonuclease III - Gloeobacter violaceus
Length = 242
Score = 39.9 bits (89), Expect = 0.38
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSR 940
G + +RLE +GD L+ +LY A P + G+++ +RS VS++ L L LG
Sbjct: 49 GEDNDRLEFLGDEILRLLAAEFLYRADPELTVGEMTAVRSVLVSDVALAELAEGYDLGEF 108
Query: 941 MIASK 945
++ +
Sbjct: 109 LVVGR 113
>UniRef50_Q318D8 Cluster: Ribonuclease III; n=5; Prochlorococcus
marinus|Rep: Ribonuclease III - Prochlorococcus marinus
(strain MIT 9312)
Length = 249
Score = 39.9 bits (89), Expect = 0.38
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 871 QALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYR 930
QA S+ + IN E+LE GD+ L+ A + ++ +P + G+ S +R++ VS+ L +
Sbjct: 44 QAFIHSSEDKIINYEKLEFFGDAVLRLAASNFIEKNYPQMSVGERSELRAQIVSDEWLTK 103
Query: 931 LGR 933
LGR
Sbjct: 104 LGR 106
>UniRef50_Q3VWC5 Cluster: Ribonuclease III; n=1; Prosthecochloris
aestuarii DSM 271|Rep: Ribonuclease III -
Prosthecochloris aestuarii DSM 271
Length = 277
Score = 39.9 bits (89), Expect = 0.38
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
+RLE +GD+ L I+ +LY P EG LS RSK V+ +L + LG+++I
Sbjct: 84 QRLEFLGDAVLDLIISEHLYKLFPESDEGALSSTRSKIVNRKSLADFAQAIALGNQLI 141
>UniRef50_Q7KNF1 Cluster: Ribonuclease; n=8; Coelomata|Rep:
Ribonuclease - Drosophila melanogaster (Fruit fly)
Length = 1327
Score = 39.9 bits (89), Expect = 0.38
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+RLE +GD+ L+ + YLY P HEG LS +RS V+N
Sbjct: 1012 QRLEFLGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNN 1052
Score = 38.3 bits (85), Expect = 1.2
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
ERLE +GD+ ++F + +L+ P + EG L+ R+ V N +L L + QL M+
Sbjct: 833 ERLEFLGDAVVEFLSSIHLFFMFPELEEGGLATYRAAIVQNQHLALLAKKLQLEEFML 890
>UniRef50_Q4A589 Cluster: Ribonuclease 3; n=1; Mycoplasma synoviae
53|Rep: Ribonuclease 3 - Mycoplasma synoviae (strain 53)
Length = 231
Score = 39.9 bits (89), Expect = 0.38
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 874 TMSNAN-DGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLG 932
T S N + + ERLE +GDS + F I+ Y ++ G+LS +RSK V L L+++
Sbjct: 37 TYSKVNKNSKDYERLEFLGDSLVGFLISDYCVREFSSLEPGELSRLRSKLVDKLALFKIA 96
Query: 933 R 933
+
Sbjct: 97 Q 97
>UniRef50_Q5P9U8 Cluster: Ribonuclease 3; n=2; Anaplasma|Rep:
Ribonuclease 3 - Anaplasma marginale (strain St. Maries)
Length = 232
Score = 39.9 bits (89), Expect = 0.38
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 868 VILQALTMSNAN--DGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
++L+ALT + N ERLE +GD+ L ++ LY P+ EG L+ R+ V
Sbjct: 26 LLLEALTHPRLSYKSAANYERLEFLGDAVLSMTVSEMLYRLFPDDDEGCLTRKRTALVRG 85
Query: 926 LNLYRLGRNKQLGSRMIAS 944
+ + R+ LG ++ S
Sbjct: 86 SEVVEIARSIGLGELILMS 104
>UniRef50_Q31HP3 Cluster: Ribonuclease III; n=2;
Gammaproteobacteria|Rep: Ribonuclease III -
Thiomicrospira crunogena (strain XCL-2)
Length = 233
Score = 39.5 bits (88), Expect = 0.51
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
N ERLE +GDS + F I L+ + EG LS +R+ V L ++G+ QL ++
Sbjct: 40 NNERLEFLGDSLVNFMIADALFHQFHKISEGDLSRIRAFLVKGETLAKIGKEYQLSDYLM 99
>UniRef50_A6LNE7 Cluster: Ribonuclease III; n=1; Thermosipho
melanesiensis BI429|Rep: Ribonuclease III - Thermosipho
melanesiensis BI429
Length = 231
Score = 39.5 bits (88), Expect = 0.51
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 876 SNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNK 935
+N N + ERLE +GDS + + LY + ++EG ++ ++S S L+ + +
Sbjct: 33 ANENKKQSYERLEFLGDSVIDILVCTILYEQYQTLNEGTMAQIKSAVTSEDILFEIAKKF 92
Query: 936 QLGSRMIASKFE 947
LG ++ K E
Sbjct: 93 NLGKYILLGKGE 104
>UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: Ribonuclease III -
Candidatus Desulfococcus oleovorans Hxd3
Length = 231
Score = 39.5 bits (88), Expect = 0.51
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L I L P + EG LS R+ V+ L +GR+ LG ++
Sbjct: 42 ERLEFLGDAALSLCIGHLLMARFPELSEGDLSQTRAGLVNAGWLADIGRSMNLGEYVLLG 101
Query: 945 KFEPHDN 951
K E N
Sbjct: 102 KGEEQTN 108
>UniRef50_Q6CIQ4 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 478
Score = 39.5 bits (88), Expect = 0.51
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GDS L +T +Y P+ EG+LS +R + ++N L + +
Sbjct: 231 ERLEFLGDSILNTTMTTIIYNKFPHFDEGQLSQLRMRLINNELLKEWSFLYKFPDELKTH 290
Query: 945 KFEPHDN 951
+P DN
Sbjct: 291 NVKPDDN 297
>UniRef50_A6SBX3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1842
Score = 39.5 bits (88), Expect = 0.51
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 27/137 (19%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSR 940
G N ERLE +GD FLK + LY +P+ E + R + N NL+ +L
Sbjct: 1373 GNNYERLEFLGDCFLKMGTSISLYGLNPDSDEFRYHVDRMCLICNKNLFNTALKLELYKY 1432
Query: 941 MIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPENVGCFIPYNLITQHSIP 1000
+ ++ F W P E P L+ K ++P H +
Sbjct: 1433 IRSAAFN-RRAWYP---EGPELLRGK-----------TATAPNT------------HKLG 1465
Query: 1001 DKSIADCVEALIGAYLL 1017
DKS+AD EA+IGA LL
Sbjct: 1466 DKSVADVCEAMIGAALL 1482
>UniRef50_Q02555 Cluster: Ribonuclease 3; n=2; Saccharomyces
cerevisiae|Rep: Ribonuclease 3 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 471
Score = 39.5 bits (88), Expect = 0.51
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
V L M NA++ ERLE +GDS L +T +Y P+ EG+LS +R VSN
Sbjct: 225 VYLSGSEMINAHN----ERLEFLGDSILNSVMTLIIYNKFPDYSEGQLSTLRMNLVSN 278
>UniRef50_Q5GTI3 Cluster: Ribonuclease 3; n=26; Rickettsiales|Rep:
Ribonuclease 3 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 243
Score = 39.5 bits (88), Expect = 0.51
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 872 ALTMSNANDGI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYR 930
+L N+ + I N ERLE +GDS L ++A L+ P EG L+ ++ V +
Sbjct: 40 SLNKRNSKNQIENYERLEFLGDSILNMIVSAILFRLFPKEKEGALARRKTDLVCGNTIAN 99
Query: 931 LGRNKQLGSRMIASKFE 947
+ + +LG+ +I + E
Sbjct: 100 VAKEIKLGNFIIMNNSE 116
>UniRef50_O01326 Cluster: Ribonuclease 3; n=2; Caenorhabditis|Rep:
Ribonuclease 3 - Caenorhabditis elegans
Length = 1086
Score = 39.5 bits (88), Expect = 0.51
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+RLE +GDS L+ ++ +LY P HEG +S +R+ VSN
Sbjct: 870 QRLEWLGDSVLQLIVSDFLYRRFPYHHEGHMSLLRTSLVSN 910
>UniRef50_A6C1C3 Cluster: Ribonuclease III; n=1; Planctomyces maris
DSM 8797|Rep: Ribonuclease III - Planctomyces maris DSM
8797
Length = 247
Score = 39.1 bits (87), Expect = 0.67
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L + L+ PN EG+L+ ++S VS RL R K L +
Sbjct: 49 ERLEFLGDAILGSIVCEKLFDQFPNAPEGELTRIKSAVVSRNTCTRLAREKGLDRFIFVG 108
Query: 945 K 945
K
Sbjct: 109 K 109
>UniRef50_A0NL28 Cluster: Ribonuclease III; n=3;
Leuconostocaceae|Rep: Ribonuclease III - Oenococcus oeni
ATCC BAA-1163
Length = 243
Score = 39.1 bits (87), Expect = 0.67
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 868 VILQALTMSN------ANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSK 921
++L+A T N G + +RLE +GDS ++ + YL+ +P+ EG+L+ MR
Sbjct: 33 LLLEAFTQGNYLNEHPEEKGRDYQRLEFLGDSVMQLIVADYLFTRYPDWEEGQLTEMRIA 92
Query: 922 QVSNLNLYRLGR 933
V + + R
Sbjct: 93 MVQSKSFSHFAR 104
>UniRef50_Q9FKF0 Cluster: Emb|CAB88120.1; n=1; Arabidopsis
thaliana|Rep: Emb|CAB88120.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 957
Score = 39.1 bits (87), Expect = 0.67
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQL 937
+RLE GDS L+ A T Y+ +PN+ +L +R+ VSN R+ N L
Sbjct: 33 DRLEFFGDSILEVAFTNYICHTYPNLKVKELRDLRTANVSNEKFARIAVNHNL 85
>UniRef50_A7RFC2 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 871
Score = 39.1 bits (87), Expect = 0.67
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 322 FLVAEICWRLSPDSVFPSAS-HATFRDYYQNKYGVTITQSKQPLL 365
+ V +I W P+S F + +F DYY+ Y TIT +QPLL
Sbjct: 322 YRVDDIDWNKRPNSTFTTPKGEISFNDYYKKNYDFTITDQEQPLL 366
>UniRef50_Q6BX76 Cluster: Similar to CA1420|CaRNT1 Candida albicans
CaRNT1 Ribonuclease III; n=1; Debaryomyces hansenii|Rep:
Similar to CA1420|CaRNT1 Candida albicans CaRNT1
Ribonuclease III - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 540
Score = 39.1 bits (87), Expect = 0.67
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
ERLE +GDS L +T ++ P EG+LS +RS V+N+ L
Sbjct: 220 ERLEFLGDSVLNNLVTVIIFNKFPEASEGELSKIRSLLVNNVTL 263
>UniRef50_A5E7T6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 729
Score = 39.1 bits (87), Expect = 0.67
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRL----GRNKQLGSR 940
ERLE GDS L IT +Y PN EG+LS +R+ ++N L + G +K+L +R
Sbjct: 389 ERLEFYGDSILNNLITIIIYNKFPNNTEGELSKIRAAMINNRVLKEIAVDYGFDKKLRTR 448
Query: 941 M 941
+
Sbjct: 449 I 449
>UniRef50_Q97QG6 Cluster: Ribonuclease 3; n=46; Lactobacillales|Rep:
Ribonuclease 3 - Streptococcus pneumoniae
Length = 232
Score = 39.1 bits (87), Expect = 0.67
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQ 936
ERLE +GD+ L+ I+ YLY +P EG LS +R+ V +L R+ Q
Sbjct: 44 ERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQ 95
>UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep:
Ribonuclease 3 - Leptospira interrogans
Length = 247
Score = 39.1 bits (87), Expect = 0.67
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GDS L L+ +P +EG+LS ++S+ VS L + +L ++
Sbjct: 59 ERLEFLGDSVLGLVAARSLFRKYPKANEGELSRIKSRIVSTPILNSISEKLELSEYLLLG 118
Query: 945 KFE 947
K E
Sbjct: 119 KGE 121
>UniRef50_Q7WD32 Cluster: Ribonuclease 3; n=62; Proteobacteria|Rep:
Ribonuclease 3 - Bordetella bronchiseptica (Alcaligenes
bronchisepticus)
Length = 256
Score = 39.1 bits (87), Expect = 0.67
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 867 SVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNL 926
+++ QALT + N ERLE +GDS L F + A L+ + + EG LS +R+ V
Sbjct: 21 ALLEQALTHRSHGARHN-ERLEFLGDSVLNFVVAAMLFERYGKLDEGDLSRLRANLVKQA 79
Query: 927 NLYRLGRNKQL 937
+L + + L
Sbjct: 80 SLADIAQRLDL 90
>UniRef50_Q8KAN7 Cluster: Ribonuclease 3; n=9; Chlorobiaceae|Rep:
Ribonuclease 3 - Chlorobium tepidum
Length = 272
Score = 38.7 bits (86), Expect = 0.88
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
+RLE +GD+ L I+ +L+ P EG LS R+K V+ +L QLG +I
Sbjct: 72 QRLEFLGDAVLDLLISEHLFKQFPGSDEGHLSSNRAKIVNRKSLAAFALELQLGEHLI 129
>UniRef50_Q2S2W4 Cluster: Ribonuclease III; n=1; Salinibacter ruber
DSM 13855|Rep: Ribonuclease III - Salinibacter ruber
(strain DSM 13855)
Length = 248
Score = 38.3 bits (85), Expect = 1.2
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L + LY P EG L+ +R++ VS L R LG ++ S
Sbjct: 57 ERLEFLGDALLDVFVGEVLYDRFPEKDEGALTRLRARLVSERPLATYARGLGLGPHLLMS 116
Query: 945 K 945
+
Sbjct: 117 E 117
>UniRef50_A4E6T0 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 241
Score = 38.3 bits (85), Expect = 1.2
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 860 GHPGPSPSVILQALTMSNANDG----INLERLETVGDSFLKFAITAYLYCAHPNVHEGKL 915
GH + ++ ALT +A +G + ERLE +GDS L + L+ ++P EGKL
Sbjct: 15 GHEFNNKVLLRAALTHPSAVEGQPVSASYERLEFLGDSILGAVVARSLFESYPEFDEGKL 74
Query: 916 SHMRSKQVSNLNL 928
+ ++ VS L
Sbjct: 75 TRLKVSLVSGATL 87
>UniRef50_Q2U0L3 Cluster: DsRNA-specific nuclease Dicer and related
ribonucleases; n=1; Aspergillus oryzae|Rep:
DsRNA-specific nuclease Dicer and related ribonucleases
- Aspergillus oryzae
Length = 1256
Score = 38.3 bits (85), Expect = 1.2
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 890 VGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPH 949
+GD+ +KF IT L+ H HEG L+ ++ VS+ L + GS +I ++F
Sbjct: 871 IGDAIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFN-G 929
Query: 950 DNWLP 954
W P
Sbjct: 930 KRWRP 934
>UniRef50_Q5UQT7 Cluster: Probable ribonuclease 3; n=1; Acanthamoeba
polyphaga mimivirus|Rep: Probable ribonuclease 3 -
Mimivirus
Length = 538
Score = 38.3 bits (85), Expect = 1.2
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERL+ +GD+ + F I YL+ + + EG L+ +R K ++ +L+ L + + S ++ S
Sbjct: 351 ERLQFLGDAVIHFIIGEYLFNKYADSGEGYLTRLRCKLENSESLFFLAKQSDISSYLLIS 410
Query: 945 K 945
+
Sbjct: 411 Q 411
>UniRef50_Q7S8J7 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease dcl-1 (EC 3.1.26.-); ATP-dependent
helicase dcl-1 (EC 3.6.1.-)]; n=2; Neurospora crassa|Rep:
Dicer-like protein 1 [Includes: Endoribonuclease dcl-1
(EC 3.1.26.-); ATP-dependent helicase dcl-1 (EC 3.6.1.-)]
- Neurospora crassa
Length = 1584
Score = 38.3 bits (85), Expect = 1.2
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLY 929
G N ERLE +GDSFLK A T +Y P+ E + R + N NL+
Sbjct: 1095 GDNYERLEFLGDSFLKMATTIAIYTLIPDKGEFEYHVERMLLICNKNLF 1143
>UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n=1;
unknown|Rep: UPI00015BD56E UniRef100 entry - unknown
Length = 232
Score = 37.9 bits (84), Expect = 1.5
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 860 GHPGPSPSVILQALT-MSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHM 918
G+ +++ +A T +S + N E LE +GD+ + F L A PN EG+LS +
Sbjct: 12 GYRFKDKNLVKKAFTHISFSKSSENYEVLEFLGDALVNFMTVNILVEAFPNKKEGELSQL 71
Query: 919 RSKQVSNLNLYRLGRNKQLGSRMIASKFE 947
+S +S L L ++ ++ SK E
Sbjct: 72 KSFLISEEFLASLAKSLNFEKYILISKGE 100
>UniRef50_A0L633 Cluster: Ribonuclease III; n=1; Magnetococcus sp.
MC-1|Rep: Ribonuclease III - Magnetococcus sp. (strain
MC-1)
Length = 246
Score = 37.9 bits (84), Expect = 1.5
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLG 938
ERLE +GDS L ++ LY V EG+LS R+ V+ +L + ++ +LG
Sbjct: 53 ERLEFLGDSVLNLIVSHRLYKRFGEVPEGQLSQWRAMLVNTRSLSEVAKDLELG 106
>UniRef50_Q6LX27 Cluster: Ribonuclease III family:Double-stranded
RNA binding (DsRBD) domain; n=4; Methanococcus|Rep:
Ribonuclease III family:Double-stranded RNA binding
(DsRBD) domain - Methanococcus maripaludis
Length = 230
Score = 37.9 bits (84), Expect = 1.5
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GD+ L I+ YL+ N+ EG++S +R+K V L+ + + + ++
Sbjct: 44 ERLEYLGDAVLDLIISEYLF-KKENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYVLLG 102
Query: 945 KFE 947
K E
Sbjct: 103 KGE 105
>UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2;
Chloroflexus|Rep: Ribonuclease III, bacterial -
Chloroflexus aurantiacus J-10-fl
Length = 244
Score = 37.5 bits (83), Expect = 2.0
Identities = 22/63 (34%), Positives = 30/63 (47%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
ERLE +GDS L F T +L+ P+ E L++ R+ VS L LG S
Sbjct: 46 ERLEFLGDSVLHFVTTTWLFETFPDQDEATLTNWRAALVSTKGLAECAAQFNLGQYAYLS 105
Query: 945 KFE 947
+ E
Sbjct: 106 RGE 108
>UniRef50_A7HCB5 Cluster: Ribonuclease III; n=3;
Cystobacterineae|Rep: Ribonuclease III -
Anaeromyxobacter sp. Fw109-5
Length = 377
Score = 37.5 bits (83), Expect = 2.0
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGS 939
ERLE +GD+ + A++ L P EG LS MR+ V L + R LGS
Sbjct: 57 ERLEFLGDAVIDLAVSHRLMERFPAAREGDLSKMRAAVVDEQGLSEMARALDLGS 111
>UniRef50_A4CTC0 Cluster: Putative ribonuclease III; n=2;
Synechococcus|Rep: Putative ribonuclease III -
Synechococcus sp. (strain WH7805)
Length = 269
Score = 37.5 bits (83), Expect = 2.0
Identities = 20/62 (32%), Positives = 40/62 (64%)
Query: 871 QALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYR 930
+ALT +++ + E+LE +GD+ L+ A + ++ A+P + G+ S +R++ VS+ L +
Sbjct: 63 EALTHTSSGLHPHHEQLEFLGDAVLRLAASEFIAVAYPQMPVGERSSLRAQLVSDRWLTQ 122
Query: 931 LG 932
LG
Sbjct: 123 LG 124
>UniRef50_A7TI15 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 478
Score = 37.5 bits (83), Expect = 2.0
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
ERLE +GDS L +T +Y P EG+LS +R VSN
Sbjct: 226 ERLEFLGDSVLNTIMTMIIYNKFPTFTEGQLSKLRMNLVSN 266
>UniRef50_UPI00006A9EC6 Cluster: hypothetical protein CHGG_04734; n=1;
Chaetomium globosum CBS 148.51|Rep: hypothetical protein
CHGG_04734 - Chaetomium globosum CBS 148.51
Length = 1476
Score = 37.1 bits (82), Expect = 2.7
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSR 940
G N ERLE +GD FLK A T ++ P+ E + R + N NL+ +L
Sbjct: 1033 GNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHVERMLLICNRNLFNNALEVKLEEH 1092
Query: 941 MIASKFEPHDNWLP 954
+ + F+ +W P
Sbjct: 1093 IRSMAFD-RRSWYP 1105
>UniRef50_Q0IDN5 Cluster: Ribonuclease III; n=9; Cyanobacteria|Rep:
Ribonuclease III - Synechococcus sp. (strain CC9311)
Length = 254
Score = 37.1 bits (82), Expect = 2.7
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 871 QALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYR 930
+ALT ++ + E+LE +GD+ L+ A + ++ HP + G+ S +R++ VS+ L
Sbjct: 39 EALTHTSTGLARHHEQLEFLGDAVLRLAASDFIESEHPQMPVGERSALRAQLVSDRWLAE 98
Query: 931 LG 932
LG
Sbjct: 99 LG 100
>UniRef50_A5IYM8 Cluster: Ribonuclease III; n=1; Mycoplasma
agalactiae|Rep: Ribonuclease III - Mycoplasma agalactiae
Length = 226
Score = 37.1 bits (82), Expect = 2.7
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 865 SPSVILQALT--MSNAND-GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSK 921
S +V QA T S AN G N + LE +GD+ L+F ++A L+ + + ++G+L+ +RSK
Sbjct: 17 SLAVYRQAFTHGSSVANSKGKNYQTLEFLGDAILQFYVSAILFNSFKDKNQGQLTLIRSK 76
Query: 922 QVSNLNLYRLGRNKQLGSRMIAS 944
V +L ++ +L ++ S
Sbjct: 77 LVCTDSLNQIADLLKLKDFLVLS 99
>UniRef50_A1APX0 Cluster: Ribonuclease III; n=1; Pelobacter
propionicus DSM 2379|Rep: Ribonuclease III - Pelobacter
propionicus (strain DSM 2379)
Length = 234
Score = 37.1 bits (82), Expect = 2.7
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 869 ILQALTMSNAND----GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVS 924
+LQALT + G N +RLE +GD+ L + L+ P+ +EG LS +RS+
Sbjct: 22 LLQALTHPSFEHEQAGGGNYQRLEFLGDAVLGMVLAEMLFRRFPDSNEGVLSRLRSQIAD 81
Query: 925 NLNLYRLGRNKQLG 938
L + R+ LG
Sbjct: 82 QDTLAGIARSFGLG 95
>UniRef50_A0WD16 Cluster: Ribonuclease III; n=1; Geobacter lovleyi
SZ|Rep: Ribonuclease III - Geobacter lovleyi SZ
Length = 228
Score = 37.1 bits (82), Expect = 2.7
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 854 FQPVLEGHPGPSPSVILQALTM-SNANDG-----INLERLETVGDSFLKFAITAYLYCAH 907
F ++ GH + ++ QALT S N+ + +RLE +GD+ L F + A L C H
Sbjct: 4 FPKLILGHSFINQRLLQQALTHPSYLNEARQEGAADYQRLEFLGDAVLGF-LLADLLCQH 62
Query: 908 -PNVHEGKLSHMRSKQVSNLNLYRL 931
P + EG LS +RS V L RL
Sbjct: 63 FPALPEGDLSRLRSSLVDQPRLARL 87
>UniRef50_A7PX71 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 287
Score = 37.1 bits (82), Expect = 2.7
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRL 931
ERLE +GDS L IT + +P++ G+L+ +RS V L R+
Sbjct: 64 ERLEFMGDSVLSLLITKEQFFLYPDLQPGRLTRLRSANVDKEKLARV 110
>UniRef50_Q6BCJ7 Cluster: Dicer-related RNase III protein Dcl1p;
n=2; Tetrahymena thermophila|Rep: Dicer-related RNase
III protein Dcl1p - Tetrahymena thermophila
Length = 1275
Score = 37.1 bits (82), Expect = 2.7
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 868 VILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+++++ + + + NLE LE +GD +K+ + YLY PN E L+ +R+ ++N
Sbjct: 735 LLIESFSQISYSKTKNLELLEVIGDVVIKYISSLYLYLHLPNQSENALTMIRTIFINN 792
>UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp. PCC
6803|Rep: Ribonuclease 3 - Synechocystis sp. (strain PCC
6803)
Length = 231
Score = 37.1 bits (82), Expect = 2.7
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 862 PGPSPSVILQALT---MSNANDGI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSH 917
P P + L+ALT N + G + +RLE +GD+ L F + L+ +P+ E +L+
Sbjct: 8 PIGDPQLKLEALTHRSYCNEHPGTPSYDRLEFLGDAVLGFVVGRILFERYPHFTEAELTR 67
Query: 918 MRSKQVSNLNLYRLGR 933
+RS+ V+ L L R
Sbjct: 68 LRSQLVNQNQLAYLAR 83
>UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio
bacteriovorus|Rep: Ribonuclease 3 - Bdellovibrio
bacteriovorus
Length = 234
Score = 37.1 bits (82), Expect = 2.7
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 860 GHPGPSPSVILQALT-MSNANDGINL----ERLETVGDSFLKFAITAYLYCAHPNVHEGK 914
GH +P+++ +ALT S AN+ N E+LE +GD+ L + +LY P EG
Sbjct: 14 GHQFKNPALLERALTHKSFANELRNTVEHNEKLEFLGDAVLDLVVGEFLYEKFPTDTEGG 73
Query: 915 LSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFE 947
LS R+ V+ L L L M K E
Sbjct: 74 LSKKRASIVNEEVLSELALEMGLNKLMQLGKGE 106
>UniRef50_Q2H0G2 Cluster: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)]; n=1; Chaetomium
globosum|Rep: Dicer-like protein 1 [Includes:
Endoribonuclease DCL1 (EC 3.1.26.-); ATP-dependent
helicase DCL1 (EC 3.6.1.-)] - Chaetomium globosum (Soil
fungus)
Length = 1607
Score = 37.1 bits (82), Expect = 2.7
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 881 GINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSR 940
G N ERLE +GD FLK A T ++ P+ E + R + N NL+ +L
Sbjct: 1107 GNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHVERMLLICNRNLFNNALEVKLEEH 1166
Query: 941 MIASKFEPHDNWLP 954
+ + F+ +W P
Sbjct: 1167 IRSMAFD-RRSWYP 1179
>UniRef50_A3I0H3 Cluster: Putative ribonuclease III; n=1;
Algoriphagus sp. PR1|Rep: Putative ribonuclease III -
Algoriphagus sp. PR1
Length = 250
Score = 36.7 bits (81), Expect = 3.6
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 882 INLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLG 932
I+ ERLE +GD+ L + YL+ +P EG L+ RSK V+ +L G
Sbjct: 62 ISNERLEFLGDAILGAVVAEYLFQKYPYRDEGFLTETRSKLVNRESLNATG 112
>UniRef50_A7SIA4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 261
Score = 36.7 bits (81), Expect = 3.6
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 868 VILQALTMSN---ANDGIN--LERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
++LQALT ++ A +N E+LE +GD+ L + +T ++ P + G ++ +RS
Sbjct: 22 ILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPRLSPGAITDLRSAV 81
Query: 923 VSNLNL 928
V+N +L
Sbjct: 82 VNNYSL 87
>UniRef50_A5DC21 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 525
Score = 36.7 bits (81), Expect = 3.6
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 873 LTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
L MS + N ERLE +GDS L +T ++ P EG+LS +R+ ++N
Sbjct: 193 LAMSELINSHN-ERLEFLGDSILNNVVTLIIFEQFPTASEGELSRIRALLINN 244
>UniRef50_Q6F1N5 Cluster: Ribonuclease 3; n=4; Mollicutes|Rep:
Ribonuclease 3 - Mesoplasma florum (Acholeplasma florum)
Length = 231
Score = 36.7 bits (81), Expect = 3.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLG 938
+RLE +GD+ L+ ++ +LY N EGKL+ RS V L + + LG
Sbjct: 40 QRLEFLGDAVLQMYVSKFLYLNFTNAPEGKLTKTRSDIVRQETLSEIAKMIDLG 93
>UniRef50_Q74AX1 Cluster: Ribonuclease 3; n=4; Geobacter|Rep:
Ribonuclease 3 - Geobacter sulfurreducens
Length = 248
Score = 36.7 bits (81), Expect = 3.6
Identities = 22/55 (40%), Positives = 27/55 (49%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGS 939
ERLE GD+ L F I L +P EG L+ M+S V L L +LGS
Sbjct: 55 ERLEFFGDAILGFCIGKMLLRHYPESREGALARMKSALVGEETLADLAAAVELGS 109
>UniRef50_Q3ZXY9 Cluster: Ribonuclease 3; n=3; Dehalococcoides|Rep:
Ribonuclease 3 - Dehalococcoides sp. (strain CBDB1)
Length = 237
Score = 36.7 bits (81), Expect = 3.6
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 877 NANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQ 936
N + G N ER+E +GD+ L LY P++ EG L+ RS V +L R+
Sbjct: 36 NHSSGSN-ERMEFLGDAVLGVIFADRLYHDFPDIQEGDLTRFRSLLVRRESLVRVALGIN 94
Query: 937 LGSRMIASKFE 947
LG + + E
Sbjct: 95 LGKYLYLGRGE 105
>UniRef50_Q87WF6 Cluster: Type III effector HopO1-2; n=5; Pseudomonas
syringae pv. tomato|Rep: Type III effector HopO1-2 -
Pseudomonas syringae pv. tomato
Length = 298
Score = 36.3 bits (80), Expect = 4.7
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Query: 1013 GAYLLECGPR-GALLFMSWLGIAVLPRHLAALPHTHSTSEQRETSAEPPPARRRVGSLPP 1071
G++L + G L S G + P H L HT+S++ + + PP S P
Sbjct: 30 GSFLKQLGGCFSPCLGSSSTGAILSPAHEQVLSHTYSSNIKGKLRTTPPKGPSPRLSDTP 89
Query: 1072 YRDRQGNWVQQVYGELKAPPSPLLRYVEDPEGELEKMLSGKE 1113
+ + + Q LK+ P L +E P+ ++K L K+
Sbjct: 90 MKQALSSMIVQERKRLKSQPKSLASDIERPDSMIKKALDEKD 131
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 36.3 bits (80), Expect = 4.7
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 807 DIDAPDYVDEKITNIGFD-DGDKYNTGNEFKPYYEDDKGGQK 847
D+D DY DE I N FD +GD++N+ +E +Y+D+K +K
Sbjct: 138 DLDLLDYNDEVIDNSNFDNNGDQFNSEDE--EFYDDEKQAKK 177
>UniRef50_Q6FQ28 Cluster: Candida glabrata strain CBS138 chromosome
I complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome I complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 734
Score = 36.3 bits (80), Expect = 4.7
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
ERLE +GDS + +T +Y + PN G+++ +R VSN L
Sbjct: 457 ERLEFLGDSVINSIMTTIIYKSFPNYDAGQMTRLRVLLVSNRRL 500
>UniRef50_Q5L6E3 Cluster: Ribonuclease 3; n=8; Chlamydiaceae|Rep:
Ribonuclease 3 - Chlamydophila abortus
Length = 237
Score = 36.3 bits (80), Expect = 4.7
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 866 PSVILQALTM-SNANDGINL----ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRS 920
P +++ ALT S N+ + ERLE +GD+ L +T +L+ P++ EG LS R+
Sbjct: 21 PKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHLFLLFPSMDEGTLSTARA 80
Query: 921 KQVSNLNLYRLGRNKQLGSRMIASKFEPHDN 951
++ ++ + LG ++ K E N
Sbjct: 81 ALINAVSCCQYTDALGLGEYLLIGKGERIQN 111
>UniRef50_Q96J94 Cluster: Piwi-like protein 1; n=34;
Euteleostomi|Rep: Piwi-like protein 1 - Homo sapiens
(Human)
Length = 861
Score = 36.3 bits (80), Expect = 4.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSA--SHATFRDYYQNKYGVTITQSKQPLL 365
+ V +I W +P S F A S +F +YY+ +Y IT KQP+L
Sbjct: 317 YRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVL 362
>UniRef50_UPI00006C0E2B Cluster: PREDICTED: similar to piwi-like 2;
n=2; Eutheria|Rep: PREDICTED: similar to piwi-like 2 -
Homo sapiens
Length = 960
Score = 35.9 bits (79), Expect = 6.2
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 322 FLVAEICWRLSPDSVFPSAS--HATFRDYYQNKYGVTITQSKQPLLDVDHTSARLNLLTP 379
+ + ++ W +P F + TF +YY YG+T+ + QPLL + S R +
Sbjct: 427 YRIDDVDWNKTPKDSFTMSDGKEITFLEYYSKNYGITVKEEDQPLL-IHRPSERQD--NH 483
Query: 380 RYVNR-KGVALPVSSERTRRAKRERLD 405
V+R +G LP SS ++L+
Sbjct: 484 GMVSRAEGTLLPDSSVLNNXKAXKKLE 510
>UniRef50_A7CV23 Cluster: Ribonuclease III; n=1; Opitutaceae
bacterium TAV2|Rep: Ribonuclease III - Opitutaceae
bacterium TAV2
Length = 250
Score = 35.9 bits (79), Expect = 6.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 860 GHPGPSPSVILQALT-----MSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGK 914
GH +P+++ A+T N N +RLE +GD+ L+ +T LY P EG
Sbjct: 29 GHKFTTPALLETAITHPSWLQDNPGAPDNNQRLELLGDAVLQLLLTHELYTLFPTDREGP 88
Query: 915 LSHMRS 920
LS R+
Sbjct: 89 LSKRRA 94
>UniRef50_A1ZI45 Cluster: Ribonuclease III; n=2;
Flexibacteraceae|Rep: Ribonuclease III - Microscilla
marina ATCC 23134
Length = 248
Score = 35.9 bits (79), Expect = 6.2
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGR 933
ERLE +GD+ L + YL+ +P EG L+ +R++ V+ +L +L R
Sbjct: 60 ERLEYLGDAILGAIVADYLFKKYPFKEEGFLTEIRARIVNRESLNQLSR 108
>UniRef50_Q59FI1 Cluster: Valyl-tRNA synthetase-like protein; n=54;
Coelomata|Rep: Valyl-tRNA synthetase-like protein - Homo
sapiens (Human)
Length = 1653
Score = 35.9 bits (79), Expect = 6.2
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 599 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 651
>UniRef50_Q5KKA8 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 875
Score = 35.9 bits (79), Expect = 6.2
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 866 PSVILQALTMSNANDGI--NLERLETVGDSFLKFAIT--AYLYCAHPNVHEGKLS--HMR 919
P + LQALT ++ + ERLE +GD+ LKF IT YL+ N E L R
Sbjct: 449 PELALQALTAPSSQNVTPWTYERLEILGDTLLKFFITIHVYLHGGGANSREDSLKVWQDR 508
Query: 920 SKQVSNLNL 928
K VSN L
Sbjct: 509 HKLVSNRTL 517
>UniRef50_Q92JB0 Cluster: Ribonuclease 3; n=8; Rickettsia|Rep:
Ribonuclease 3 - Rickettsia conorii
Length = 227
Score = 35.9 bits (79), Expect = 6.2
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 880 DGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGS 939
D + ERLE +GD+ L IT L+ N +EG L+ +RS V + +G L +
Sbjct: 38 DDKDYERLEFLGDAVLNLVITEILFRNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKN 97
Query: 940 RMIASKFE 947
+I + E
Sbjct: 98 YIIMTHGE 105
>UniRef50_Q88WK0 Cluster: Ribonuclease 3; n=5; Lactobacillales|Rep:
Ribonuclease 3 - Lactobacillus plantarum
Length = 231
Score = 35.9 bits (79), Expect = 6.2
Identities = 14/39 (35%), Positives = 27/39 (69%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQV 923
ER+E +GD+ L+ ++ YLY + ++ +GKL+ +R+ V
Sbjct: 45 ERVEFLGDAVLELVVSEYLYKRYKDMPQGKLTRLRAAMV 83
>UniRef50_UPI0000D55F95 Cluster: PREDICTED: similar to CG40300-PA.3;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG40300-PA.3 - Tribolium castaneum
Length = 718
Score = 35.5 bits (78), Expect = 8.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSASH--ATFRDYYQNKYGVTITQSKQPLL 365
+++ +I W ++P F S + F DYY+ Y + I QPLL
Sbjct: 313 YIIDDIAWNMNPKDTFEDRSKGPSCFIDYYREHYNIRIEDVDQPLL 358
>UniRef50_A4GK15 Cluster: Ribonuclease III; n=1; uncultured marine
bacterium HF130_81H07|Rep: Ribonuclease III - uncultured
marine bacterium HF130_81H07
Length = 220
Score = 35.5 bits (78), Expect = 8.2
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 860 GHPGPSPSVILQALT-MSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHM 918
G+ +++ALT +S + + N E E +GDS L I+ L EG LS M
Sbjct: 13 GYSFQKKETLVKALTHVSKSKE--NNEVFEFLGDSVLNLIISQILVEKFSMDDEGTLSLM 70
Query: 919 RSKQVSNLNLYRLGRNKQLGSRMI 942
RSK VS L ++ + +L S ++
Sbjct: 71 RSKLVSRTTLNKIAKKLELDSFIV 94
>UniRef50_A2SDH3 Cluster: Ribonuclease III; n=1; Methylibium
petroleiphilum PM1|Rep: Ribonuclease III - Methylibium
petroleiphilum (strain PM1)
Length = 248
Score = 35.5 bits (78), Expect = 8.2
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 852 FDFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVH 911
FD V GH ++ +ALT + N ERLE +GD+ L AI+ L+
Sbjct: 23 FDSLQVRLGHRFAQVGLLGRALTHKSFGADNN-ERLEFLGDAVLSAAISGLLFEHFGQSG 81
Query: 912 EGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFE 947
EG L+ +R+ V L+RL + L + + S+ E
Sbjct: 82 EGDLTRVRAHLVREEMLHRLALDLGLPALLRLSEGE 117
>UniRef50_Q8ISG8 Cluster: Macronuclear development protein 1; n=3;
Stichotrichida|Rep: Macronuclear development protein 1 -
Stylonychia lemnae
Length = 791
Score = 35.5 bits (78), Expect = 8.2
Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 322 FLVAEICWRLSPDSVFP-SASHATFRDYYQNKYGVTITQSKQPLL 365
+ V + + +SP++ F S + +++DYY+ +Y ++ + QPLL
Sbjct: 235 YKVERVDFSMSPETTFDKSGTQVSYKDYYKTRYNESVNEPNQPLL 279
>UniRef50_Q1ZXG9 Cluster: Argonaut-like protein; n=1; Dictyostelium
discoideum AX4|Rep: Argonaut-like protein -
Dictyostelium discoideum AX4
Length = 1295
Score = 35.5 bits (78), Expect = 8.2
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 322 FLVAEICWRLSPDSVFPSASHA--TFRDYYQNKYGVTITQSKQPLLDVDHTSARLN--LL 377
+ + I W SP S F + ++ TF +YY+ Y ++T +QPLL + R L
Sbjct: 814 YRINSIEWNKSPRSNFRTDANGEITFENYYRITYDRSVTDYEQPLL-ISRCKGRKEDVYL 872
Query: 378 TPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLP 412
P + N G++ + +R K + ++++ ++ P
Sbjct: 873 IPEFCNLTGIS---NEDRKNGQKMKEINERTVVEP 904
>UniRef50_A7BJS4 Cluster: Aubergine; n=4; Endopterygota|Rep:
Aubergine - Bombyx mori (Silk moth)
Length = 805
Score = 35.5 bits (78), Expect = 8.2
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 322 FLVAEICWRLSPDSVFPSAS-HATFRDYYQNKYGVTITQSKQPLL 365
+ V ++ W +SP S F + T+ +YY KY + I QPLL
Sbjct: 261 YRVDDVAWNVSPKSTFKMRDENITYIEYYYKKYNLRIQDPGQPLL 305
>UniRef50_Q9P6D6 Cluster: Related to Ribonuclease III; n=2;
Sordariales|Rep: Related to Ribonuclease III -
Neurospora crassa
Length = 352
Score = 35.5 bits (78), Expect = 8.2
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 879 NDGI-NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNL 928
ND + + ERLE +GD++L+ ++++Y P + GK + R + N L
Sbjct: 83 NDPVASYERLEWIGDAYLELIASSFIYQTFPTLPAGKSAQRREMLIRNTTL 133
>UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema
denticola|Rep: Ribonuclease 3 - Treponema denticola
Length = 246
Score = 35.5 bits (78), Expect = 8.2
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 883 NLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
N ERLE +GDS L +YLY + + EG+L+ +++ VS L + + + ++
Sbjct: 52 NNERLEFLGDSVLGLVAASYLYKSFEDRPEGELAKIKASAVSEDALSKTASKLNISNYLV 111
Query: 943 ASKFE 947
+ E
Sbjct: 112 LGRGE 116
>UniRef50_Q9X0I6 Cluster: Ribonuclease 3; n=3; Thermotogaceae|Rep:
Ribonuclease 3 - Thermotoga maritima
Length = 240
Score = 35.5 bits (78), Expect = 8.2
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIAS 944
E+LE +GD+ L+ + LY +P G L+ ++S S L + R LG +
Sbjct: 51 EKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLG 110
Query: 945 KFE 947
K E
Sbjct: 111 KGE 113
>UniRef50_Q6N6C1 Cluster: Ribonuclease 3; n=14; Rhizobiales|Rep:
Ribonuclease 3 - Rhodopseudomonas palustris
Length = 272
Score = 35.5 bits (78), Expect = 8.2
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 860 GHPGPSPSVILQALT----MSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKL 915
GH PS++ A T + +A + +RLE +GD L ++ LY A P+ EG+L
Sbjct: 52 GHSFADPSLLTTAFTHVSALKSARRTDSYQRLEFLGDHVLGLIVSDMLYRAFPDADEGEL 111
Query: 916 S 916
S
Sbjct: 112 S 112
>UniRef50_Q8TC59 Cluster: Piwi-like protein 2; n=27; Eumetazoa|Rep:
Piwi-like protein 2 - Homo sapiens (Human)
Length = 973
Score = 35.5 bits (78), Expect = 8.2
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSAS--HATFRDYYQNKYGVTITQSKQPLL 365
+ + ++ W +P F + TF +YY YG+T+ + QPLL
Sbjct: 427 YRIDDVDWNKTPKDSFTMSDGKEITFLEYYSKNYGITVKEEDQPLL 472
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.316 0.134 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,165,524,524
Number of Sequences: 1657284
Number of extensions: 47259242
Number of successful extensions: 108847
Number of sequences better than 10.0: 223
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 108341
Number of HSP's gapped (non-prelim): 498
length of query: 1126
length of database: 575,637,011
effective HSP length: 109
effective length of query: 1017
effective length of database: 394,993,055
effective search space: 401707936935
effective search space used: 401707936935
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 78 (35.5 bits)
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