Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001833-TA|BGIBMGA001833-PA|IPR003100|Argonaute and Dicer
protein, PAZ, IPR000999|Ribonuclease III
(1126 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 29 0.24
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 27 0.55
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 27 0.55
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 27 0.55
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 27 0.55
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 2.2
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 25 2.2
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 25 2.9
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 25 2.9
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 25 2.9
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 25 3.8
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 23 8.9
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 28.7 bits (61), Expect = 0.24
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 920 SKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWL--PPCHEPPPTLQPKLNLNGQDKKQN 977
+ V + L G +G + ASK + D+WL P + PP T P + N
Sbjct: 74 TNNVPSNGLSSSGPFSSIGGGISASKRQRTDDWLSSPSGNVPPLTPSPGPPSHPYTVISN 133
Query: 978 VDSSPENVGCFIPYN 992
SSP + G + PY+
Sbjct: 134 GYSSPMSSGSYDPYS 148
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 27.5 bits (58), Expect = 0.55
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 778 NKRFILNHLKTNLKPEEIKSLFCFSMKDIDIDAPDYVDEKITNIGFDDGDKYNTGNE 834
NK ++ LK+ L+ +E +S + K + + PDY + + T+I FDD + + N+
Sbjct: 573 NKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYYEFE-THIFFDDAFEISDHND 628
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 27.5 bits (58), Expect = 0.55
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 778 NKRFILNHLKTNLKPEEIKSLFCFSMKDIDIDAPDYVDEKITNIGFDDGDKYNTGNE 834
NK ++ LK+ L+ +E +S + K + + PDY + + T+I FDD + + N+
Sbjct: 573 NKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYYEFE-THIFFDDAFEISDHND 628
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 27.5 bits (58), Expect = 0.55
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 778 NKRFILNHLKTNLKPEEIKSLFCFSMKDIDIDAPDYVDEKITNIGFDDGDKYNTGNE 834
NK ++ LK+ L+ +E +S + K + + PDY + + T+I FDD + + N+
Sbjct: 573 NKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYYEFE-THIFFDDAFEISDHND 628
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 27.5 bits (58), Expect = 0.55
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 778 NKRFILNHLKTNLKPEEIKSLFCFSMKDIDIDAPDYVDEKITNIGFDDGDKYNTGNE 834
NK ++ LK+ L+ +E +S + K + + PDY + + T+I FDD + + N+
Sbjct: 573 NKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYYEFE-THIFFDDAFEISDHND 628
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 25.4 bits (53), Expect = 2.2
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 303 KYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVTITQSKQ 362
K ++ + +N Q +A++ L PDSV+ ++ T R Y T+ +
Sbjct: 337 KNEDETKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFINNLTDRKLLSAWYMNTVLGHQN 396
Query: 363 PLLDVDHTSARLNLLTPRYVNRK 385
P L + T + N + +++K
Sbjct: 397 PYLALPKTDSSDNRILNNLLDKK 419
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 25.4 bits (53), Expect = 2.2
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 303 KYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVTITQSKQ 362
K ++ + +N Q +A++ L PDSV+ ++ T R Y T+ +
Sbjct: 229 KNEDETKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFINNLTDRKLLSAWYMNTVLGHQN 288
Query: 363 PLLDVDHTSARLNLLTPRYVNRK 385
P L + T + N + +++K
Sbjct: 289 PYLALPKTDSSDNRILNNLLDKK 311
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 25.0 bits (52), Expect = 2.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 773 QSVERNKRFILNHLKTNLKPEEIKSLFCFSMKDIDI 808
Q++E K F NH T + EI C + + I I
Sbjct: 17 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKI 52
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 25.0 bits (52), Expect = 2.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 773 QSVERNKRFILNHLKTNLKPEEIKSLFCFSMKDIDI 808
Q++E K F NH T + EI C + + I I
Sbjct: 168 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKI 203
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 25.0 bits (52), Expect = 2.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 773 QSVERNKRFILNHLKTNLKPEEIKSLFCFSMKDIDI 808
Q++E K F NH T + EI C + + I I
Sbjct: 227 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKI 262
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 24.6 bits (51), Expect = 3.8
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 751 VLEMFPYGTRELRHADDGRLT-LQSVERNKRFILNHLKTNLKPEEIKSLFCFSMKDIDI 808
+ + +G LR T Q++E K F NH T + E+ C + + I I
Sbjct: 211 IADSMTFGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 269
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 23.4 bits (48), Expect = 8.9
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 773 QSVERNKRFILNHLKTNLKPEEIKSLFCFSMKDIDI 808
Q++E K F NH T + E+ C + + I I
Sbjct: 16 QTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 51
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.316 0.134 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,376
Number of Sequences: 317
Number of extensions: 10049
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 14
length of query: 1126
length of database: 114,650
effective HSP length: 64
effective length of query: 1062
effective length of database: 94,362
effective search space: 100212444
effective search space used: 100212444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)
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