GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001833-TA|BGIBMGA001833-PA|IPR003100|Argonaute and Dicer
protein, PAZ, IPR000999|Ribonuclease III
         (1126 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.        261   6e-71
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    26   6.4  
AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    25   8.5  
AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding pr...    25   8.5  
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    25   8.5  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score =  261 bits (640), Expect = 6e-71
 Identities = 140/290 (48%), Positives = 167/290 (57%), Gaps = 22/290 (7%)

Query: 297  FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
            + FD  K+++AVV PWYRN+DQPQYF VAEIC  LSP S FP +++ATF +YY  KY + 
Sbjct: 1016 YTFDVGKFRDAVVMPWYRNRDQPQYFYVAEICNHLSPKSTFPGSNYATFEEYYHRKYKIH 1075

Query: 357  ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
            I   +QPLLDVDHTSARLN LTPRYVNRKGVALP SSE T+RAKRE L+QKQ+L+PELC 
Sbjct: 1076 IQNQRQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCT 1135

Query: 417  AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLG------IPHPHARPPPLD 470
             HPF A LW A V LPC LYRINALL+A+EIRR VA ++ LG      +     + P L 
Sbjct: 1136 IHPFPASLWRAAVCLPCVLYRINALLLADEIRRQVARDLRLGWENVDELQEGQFQWPMLS 1195

Query: 471  FGWSLAEVLSADAXXXXXXXXXXXXXXXXXXXXXPGDDSAETNTXXXXXXXXXXXTKTIN 530
            FGW+LA+VL                            D    N             K  N
Sbjct: 1196 FGWNLADVLRKTKEQKIAQAQEAIDASAPEVEDEVELDKEAPNVRDAAEVDEEDGLKMEN 1255

Query: 531  DILQEKE----DAENG------------FEIGTWSNEMASSIPEDTDFDE 564
             ++ E E    D E+              EIGTWSNEMA  +  D D  E
Sbjct: 1256 GVIAEVEKSQVDGEDDTGDKKTDSDGTLLEIGTWSNEMAVGVGTDNDMGE 1305



 Score =  206 bits (503), Expect = 3e-54
 Identities = 93/126 (73%), Positives = 105/126 (83%)

Query: 842  DKGGQKREFDFDFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITA 901
            D+ G    F FD+QP L  HPGPSP++ILQALTMSNANDGINLERLET+GDSFLK+AIT 
Sbjct: 1640 DEAGGVDYFSFDYQPDLSQHPGPSPAIILQALTMSNANDGINLERLETIGDSFLKYAITT 1699

Query: 902  YLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPP 961
            YLYC + NVHEGKLSH+RSKQVSNLNLYRLGR K+LG  MIA+KFEPHDNWLPPC+  P 
Sbjct: 1700 YLYCRYDNVHEGKLSHLRSKQVSNLNLYRLGRRKRLGDCMIAAKFEPHDNWLPPCYYVPK 1759

Query: 962  TLQPKL 967
             L+  L
Sbjct: 1760 ELEQTL 1765



 Score =  112 bits (269), Expect = 6e-26
 Identities = 61/115 (53%), Positives = 75/115 (65%), Gaps = 11/115 (9%)

Query: 983  ENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLPRHLAA 1042
            +N  C+IPYNL+TQHSIPDKS+ADCVEALIGAYL+ECGPRGALLFM+WLGI VLP     
Sbjct: 1852 DNGSCYIPYNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPP 1911

Query: 1043 LPHTHSTSEQRETSAEPPPAR-RRVGSLPPYRDRQGNWVQQVYGELKAPPSPLLR 1096
            +      +   ET+  P  A  +  G L       G  + + YG   APPSP++R
Sbjct: 1912 V----KLNSNNETALTPYKATGQNDGPL-----STGVTIAE-YGHWVAPPSPMVR 1956



 Score = 48.8 bits (111), Expect = 8e-07
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 105 ANEVGTDSCRLSLQVPAFPVYTRSGEVRVSLQHAPDADVRISPXXXXXXXXXXXXXXSEV 164
           A   G  + +L  ++ +FP++TRSGEV+VSL   P   V++S               ++V
Sbjct: 883 AQGFGILTTKLIPKISSFPIFTRSGEVKVSLDLCPQR-VKLSAHQLEMVNCFVKYTFTKV 941

Query: 165 LRVRRRGMRLQSEGSTHNNYYVVPTIK 191
           LR+ ++ + L    +T N +++VPT+K
Sbjct: 942 LRL-QKSLMLYDANATENCFFIVPTVK 967



 Score = 32.7 bits (71), Expect = 0.056
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 853  DFQPVLEGHPGPSPSVILQALTMSNANDGINLE---RLETVGDSFLKFAITAYLYCAHPN 909
            +F+  L G+     S +LQA+T ++ +     +   RLE +GD+ L + IT +LY     
Sbjct: 1984 EFEQAL-GYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQ 2042

Query: 910  VHEGKLSHMRSKQVSN 925
               G L+ +RS  V+N
Sbjct: 2043 HSPGALTDLRSALVNN 2058


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 936 QLGSRMIASKFEPHDNWLPPCHEPPPTLQPKLNLNGQDKKQNVDSSPE 983
           Q G++ ++   E  +   P     PP L P + L  Q+   N + SP+
Sbjct: 384 QRGNQSLSQMTEILEAIQPEFPPTPPQLSPGVGLQSQNNLSNTNRSPQ 431


>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding protein
            AgamOBP30 protein.
          Length = 289

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 1005 ADCVE--ALIGAYLLECGPRGALLFMSWL 1031
            +DC +   LI  Y+ EC P G ++F++ L
Sbjct: 260  SDCQDECTLIARYVRECFPAGGIIFLNSL 288


>AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding protein
            OBPjj83c protein.
          Length = 273

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 1005 ADCVE--ALIGAYLLECGPRGALLFMSWL 1031
            +DC +   LI  Y+ EC P G ++F++ L
Sbjct: 244  SDCQDECTLIARYVRECFPAGGIIFLNSL 272


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding protein
            1 protein.
          Length = 289

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 1005 ADCVE--ALIGAYLLECGPRGALLFMSWL 1031
            +DC +   LI  Y+ EC P G ++F++ L
Sbjct: 260  SDCQDECTLIARYVRECFPAGGIIFLNSL 288


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.134    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,071,392
Number of Sequences: 2123
Number of extensions: 42310
Number of successful extensions: 96
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 86
Number of HSP's gapped (non-prelim): 11
length of query: 1126
length of database: 516,269
effective HSP length: 71
effective length of query: 1055
effective length of database: 365,536
effective search space: 385640480
effective search space used: 385640480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)