Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001833-TA|BGIBMGA001833-PA|IPR003100|Argonaute and Dicer
protein, PAZ, IPR000999|Ribonuclease III
(1126 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase K... 196 3e-49
AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein. 196 3e-49
AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein. 196 3e-49
BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein. 40 0.038
BC041162-1|AAH41162.1| 722|Homo sapiens RNASEN protein protein. 40 0.038
AK001121-1|BAA91511.1| 769|Homo sapiens protein ( Homo sapiens ... 40 0.038
AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein. 40 0.038
AF116910-1|AAD29637.1| 541|Homo sapiens putative ribonuclease I... 40 0.038
BC028581-1|AAH28581.1| 861|Homo sapiens piwi-like 1 (Drosophila... 36 0.62
AK093133-1|BAC04068.1| 829|Homo sapiens protein ( Homo sapiens ... 36 0.62
AF387507-1|AAK69348.1| 861|Homo sapiens PIWI protein protein. 36 0.62
AF264004-1|AAK92281.1| 775|Homo sapiens HIWI protein. 36 0.62
AB274731-1|BAF49084.1| 530|Homo sapiens piwi-like 1 protein. 36 0.62
BC113605-1|AAI13606.1| 1063|Homo sapiens valyl-tRNA synthetase 2... 36 0.82
BC112054-1|AAI12055.1| 1063|Homo sapiens valyl-tRNA synthetase 2... 36 0.82
AL773541-5|CAI18453.1| 1063|Homo sapiens valyl-tRNA synthetase 2... 36 0.82
AL773541-4|CAI18454.1| 993|Homo sapiens valyl-tRNA synthetase 2... 36 0.82
AL669830-5|CAI18004.1| 1063|Homo sapiens valyl-tRNA synthetase l... 36 0.82
AL669830-4|CAM25404.1| 326|Homo sapiens valyl-tRNA synthetase l... 36 0.82
AL669830-3|CAM25403.1| 115|Homo sapiens valyl-tRNA synthetase l... 36 0.82
AL662854-14|CAI17437.1| 1063|Homo sapiens valyl-tRNA synthetase ... 36 0.82
AL662854-13|CAM24842.1| 326|Homo sapiens valyl-tRNA synthetase ... 36 0.82
AL662854-12|CAM24841.1| 115|Homo sapiens valyl-tRNA synthetase ... 36 0.82
AB209479-1|BAD92716.1| 1653|Homo sapiens VARS2L protein variant ... 36 0.82
AB067472-1|BAB67778.1| 1098|Homo sapiens KIAA1885 protein protein. 36 0.82
BC111751-1|AAI11752.1| 973|Homo sapiens piwi-like 2 (Drosophila... 36 1.1
BC025995-1|AAH25995.1| 973|Homo sapiens piwi-like 2 (Drosophila... 36 1.1
AF104260-1|AAC97371.2| 861|Homo sapiens HIWI protein. 36 1.1
AB079367-1|BAC81342.1| 973|Homo sapiens PIWIL2 protein. 36 1.1
AB079368-1|BAC81343.1| 882|Homo sapiens PIWIL3 protein. 35 1.9
BC031060-1|AAH31060.1| 852|Homo sapiens piwi-like 4 (Drosophila... 34 3.3
AK093475-1|BAC04179.1| 852|Homo sapiens protein ( Homo sapiens ... 34 3.3
AB079366-1|BAC81341.1| 852|Homo sapiens PIWIL1 protein. 34 3.3
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 33 4.4
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 33 4.4
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 33 4.4
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 33 4.4
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 33 4.4
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 33 4.4
AK096837-1|BAC04873.1| 666|Homo sapiens protein ( Homo sapiens ... 33 4.4
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 33 4.4
>AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase
K12H4.8-like protein protein.
Length = 1912
Score = 196 bits (479), Expect = 3e-49
Identities = 95/179 (53%), Positives = 121/179 (67%), Gaps = 2/179 (1%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
FVF + Y++AV+ P YRN DQP F VA++ L+P S FPS + TF +YY+ KY +
Sbjct: 910 FVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLD 969
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
+T QPLLDVDHTS+RLNLLTPR++N+KG ALP+SS R+AK E L KQ+L+PELC
Sbjct: 970 LTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCA 1029
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGIPHPHA--RPPPLDFGW 473
HP A LW V LP LYR++ LL AEE+R A + G+G+ A R P LDFGW
Sbjct: 1030 IHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGW 1088
Score = 144 bits (348), Expect = 2e-33
Identities = 64/93 (68%), Positives = 78/93 (83%)
Query: 863 GPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
GP+P +ILQALT+SNA+DG NLERLE +GDSFLK AIT YL+C +P+ HEG+LS+MRSK+
Sbjct: 1281 GPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK 1340
Query: 923 VSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPP 955
VSN NLYRLG+ K L SRM+ S F+P NWLPP
Sbjct: 1341 VSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPP 1373
Score = 72.1 bits (169), Expect = 1e-11
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 929 YRLGRNKQLGSRMIASKFEPHD--NWLPPCHEPPPTLQPKLNL-----NGQDKKQNVDSS 981
+++ + LGS +S FE D +W C+ P + + N ++ VD+
Sbjct: 1471 WKMPKKSSLGSMPFSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTG 1530
Query: 982 PENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLP---- 1037
+++ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LG+ VLP
Sbjct: 1531 KQSIS----YDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKR 1586
Query: 1038 --RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAPPSPLL 1095
R A P T ++ + A V S R YG LK PP +
Sbjct: 1587 TDREKALCP-TRENFNSQQKNLSVSCAAASVAS-----SRSSVLKDSEYGCLKIPPRCMF 1640
Query: 1096 RYVEDPEGELEKMLSGKE 1113
+ D + L ++SG E
Sbjct: 1641 DH-PDADKTLNHLISGFE 1657
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 118 QVPAFPVYTRSGEVRVSLQ 136
Q+P FPVYTRSGEV +S++
Sbjct: 802 QIPHFPVYTRSGEVTISIE 820
>AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein.
Length = 1924
Score = 196 bits (479), Expect = 3e-49
Identities = 95/179 (53%), Positives = 121/179 (67%), Gaps = 2/179 (1%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
FVF + Y++AV+ P YRN DQP F VA++ L+P S FPS + TF +YY+ KY +
Sbjct: 922 FVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLD 981
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
+T QPLLDVDHTS+RLNLLTPR++N+KG ALP+SS R+AK E L KQ+L+PELC
Sbjct: 982 LTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCA 1041
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGIPHPHA--RPPPLDFGW 473
HP A LW V LP LYR++ LL AEE+R A + G+G+ A R P LDFGW
Sbjct: 1042 IHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGW 1100
Score = 144 bits (348), Expect = 2e-33
Identities = 64/93 (68%), Positives = 78/93 (83%)
Query: 863 GPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
GP+P +ILQALT+SNA+DG NLERLE +GDSFLK AIT YL+C +P+ HEG+LS+MRSK+
Sbjct: 1293 GPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK 1352
Query: 923 VSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPP 955
VSN NLYRLG+ K L SRM+ S F+P NWLPP
Sbjct: 1353 VSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPP 1385
Score = 72.1 bits (169), Expect = 1e-11
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 929 YRLGRNKQLGSRMIASKFEPHD--NWLPPCHEPPPTLQPKLNL-----NGQDKKQNVDSS 981
+++ + LGS +S FE D +W C+ P + + N ++ VD+
Sbjct: 1483 WKMPKKSSLGSMPFSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTG 1542
Query: 982 PENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLP---- 1037
+++ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LG+ VLP
Sbjct: 1543 KQSIS----YDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKR 1598
Query: 1038 --RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAPPSPLL 1095
R A P T ++ + A V S R YG LK PP +
Sbjct: 1599 TDREKALCP-TRENFNSQQKNLSVSCAAASVAS-----SRSSVLKDSEYGCLKIPPRCMF 1652
Query: 1096 RYVEDPEGELEKMLSGKE 1113
+ D + L ++SG E
Sbjct: 1653 DH-PDADKTLNHLISGFE 1669
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 118 QVPAFPVYTRSGEVRVSLQ 136
Q+P FPVYTRSGEV +S++
Sbjct: 814 QIPHFPVYTRSGEVTISIE 832
>AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein.
Length = 1922
Score = 196 bits (479), Expect = 3e-49
Identities = 95/179 (53%), Positives = 121/179 (67%), Gaps = 2/179 (1%)
Query: 297 FVFDPDKYKEAVVTPWYRNQDQPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVT 356
FVF + Y++AV+ P YRN DQP F VA++ L+P S FPS + TF +YY+ KY +
Sbjct: 920 FVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLD 979
Query: 357 ITQSKQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCR 416
+T QPLLDVDHTS+RLNLLTPR++N+KG ALP+SS R+AK E L KQ+L+PELC
Sbjct: 980 LTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCA 1039
Query: 417 AHPFAAPLWAATVALPCALYRINALLIAEEIRRSVAVEVGLGIPHPHA--RPPPLDFGW 473
HP A LW V LP LYR++ LL AEE+R A + G+G+ A R P LDFGW
Sbjct: 1040 IHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGW 1098
Score = 144 bits (348), Expect = 2e-33
Identities = 64/93 (68%), Positives = 78/93 (83%)
Query: 863 GPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQ 922
GP+P +ILQALT+SNA+DG NLERLE +GDSFLK AIT YL+C +P+ HEG+LS+MRSK+
Sbjct: 1291 GPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK 1350
Query: 923 VSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPP 955
VSN NLYRLG+ K L SRM+ S F+P NWLPP
Sbjct: 1351 VSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPP 1383
Score = 72.1 bits (169), Expect = 1e-11
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 929 YRLGRNKQLGSRMIASKFEPHD--NWLPPCHEPPPTLQPKLNL-----NGQDKKQNVDSS 981
+++ + LGS +S FE D +W C+ P + + N ++ VD+
Sbjct: 1481 WKMPKKSSLGSMPFSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTG 1540
Query: 982 PENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLP---- 1037
+++ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LG+ VLP
Sbjct: 1541 KQSIS----YDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKR 1596
Query: 1038 --RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAPPSPLL 1095
R A P T ++ + A V S R YG LK PP +
Sbjct: 1597 TDREKALCP-TRENFNSQQKNLSVSCAAASVAS-----SRSSVLKDSEYGCLKIPPRCMF 1650
Query: 1096 RYVEDPEGELEKMLSGKE 1113
+ D + L ++SG E
Sbjct: 1651 DH-PDADKTLNHLISGFE 1667
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 118 QVPAFPVYTRSGEVRVSLQ 136
Q+P FPVYTRSGEV +S++
Sbjct: 812 QIPHFPVYTRSGEVTISIE 830
>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
Length = 1192
Score = 40.3 bits (90), Expect = 0.038
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
ERLE +GD+ ++F + +LY P++ EG L+ R+ V N +L L + +L M+
Sbjct: 929 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFML 986
Score = 40.3 bits (90), Expect = 0.038
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+R+E +GDS ++ T YL+ P+ HEG L+ +RS V+N
Sbjct: 1107 QRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNN 1147
>BC041162-1|AAH41162.1| 722|Homo sapiens RNASEN protein protein.
Length = 722
Score = 40.3 bits (90), Expect = 0.038
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
ERLE +GD+ ++F + +LY P++ EG L+ R+ V N +L L + +L M+
Sbjct: 314 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFML 371
Score = 40.3 bits (90), Expect = 0.038
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+R+E +GDS ++ T YL+ P+ HEG L+ +RS V+N
Sbjct: 492 QRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNN 532
>AK001121-1|BAA91511.1| 769|Homo sapiens protein ( Homo sapiens
cDNA FLJ10259 fis, clone HEMBB1000947, highly similar to
Homo sapiens clone HAW100 putative ribonuclease III
mRNA. ).
Length = 769
Score = 40.3 bits (90), Expect = 0.038
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
ERLE +GD+ ++F + +LY P++ EG L+ R+ V N +L L + +L M+
Sbjct: 361 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFML 418
Score = 40.3 bits (90), Expect = 0.038
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+R+E +GDS ++ T YL+ P+ HEG L+ +RS V+N
Sbjct: 539 QRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNN 579
>AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.
Length = 1374
Score = 40.3 bits (90), Expect = 0.038
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
ERLE +GD+ ++F + +LY P++ EG L+ R+ V N +L L + +L M+
Sbjct: 966 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDPFML 1023
Score = 40.3 bits (90), Expect = 0.038
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+R+E +GDS ++ T YL+ P+ HEG L+ +RS V+N
Sbjct: 1144 QRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNN 1184
>AF116910-1|AAD29637.1| 541|Homo sapiens putative ribonuclease III
protein.
Length = 541
Score = 40.3 bits (90), Expect = 0.038
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSNLNLYRLGRNKQLGSRMI 942
ERLE +GD+ ++F + +LY P++ EG L+ R+ V N +L L + +L M+
Sbjct: 133 ERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFML 190
Score = 40.3 bits (90), Expect = 0.038
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 885 ERLETVGDSFLKFAITAYLYCAHPNVHEGKLSHMRSKQVSN 925
+R+E +GDS ++ T YL+ P+ HEG L+ +RS V+N
Sbjct: 311 QRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNN 351
>BC028581-1|AAH28581.1| 861|Homo sapiens piwi-like 1 (Drosophila)
protein.
Length = 861
Score = 36.3 bits (80), Expect = 0.62
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSA--SHATFRDYYQNKYGVTITQSKQPLL 365
+ V +I W +P S F A S +F +YY+ +Y IT KQP+L
Sbjct: 317 YRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVL 362
>AK093133-1|BAC04068.1| 829|Homo sapiens protein ( Homo sapiens
cDNA FLJ35814 fis, clone TESTI2006083, highly similar to
Mus musculus mRNA for MIWI (piwi). ).
Length = 829
Score = 36.3 bits (80), Expect = 0.62
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSA--SHATFRDYYQNKYGVTITQSKQPLL 365
+ V +I W +P S F A S +F +YY+ +Y IT KQP+L
Sbjct: 317 YRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVL 362
>AF387507-1|AAK69348.1| 861|Homo sapiens PIWI protein protein.
Length = 861
Score = 36.3 bits (80), Expect = 0.62
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSA--SHATFRDYYQNKYGVTITQSKQPLL 365
+ V +I W +P S F A S +F +YY+ +Y IT KQP+L
Sbjct: 317 YRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVL 362
>AF264004-1|AAK92281.1| 775|Homo sapiens HIWI protein.
Length = 775
Score = 36.3 bits (80), Expect = 0.62
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSA--SHATFRDYYQNKYGVTITQSKQPLL 365
+ V +I W +P S F A S +F +YY+ +Y IT KQP+L
Sbjct: 231 YRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVL 276
>AB274731-1|BAF49084.1| 530|Homo sapiens piwi-like 1 protein.
Length = 530
Score = 36.3 bits (80), Expect = 0.62
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSA--SHATFRDYYQNKYGVTITQSKQPLL 365
+ V +I W +P S F A S +F +YY+ +Y IT KQP+L
Sbjct: 317 YRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQKITDLKQPVL 362
>BC113605-1|AAI13606.1| 1063|Homo sapiens valyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 1063
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>BC112054-1|AAI12055.1| 1063|Homo sapiens valyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 1063
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>AL773541-5|CAI18453.1| 1063|Homo sapiens valyl-tRNA synthetase 2-like
protein.
Length = 1063
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>AL773541-4|CAI18454.1| 993|Homo sapiens valyl-tRNA synthetase 2-like
protein.
Length = 993
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>AL669830-5|CAI18004.1| 1063|Homo sapiens valyl-tRNA synthetase like
protein.
Length = 1063
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>AL669830-4|CAM25404.1| 326|Homo sapiens valyl-tRNA synthetase like
protein.
Length = 326
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>AL669830-3|CAM25403.1| 115|Homo sapiens valyl-tRNA synthetase like
protein.
Length = 115
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>AL662854-14|CAI17437.1| 1063|Homo sapiens valyl-tRNA synthetase like
protein.
Length = 1063
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>AL662854-13|CAM24842.1| 326|Homo sapiens valyl-tRNA synthetase like
protein.
Length = 326
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>AL662854-12|CAM24841.1| 115|Homo sapiens valyl-tRNA synthetase like
protein.
Length = 115
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 17 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 69
>AB209479-1|BAD92716.1| 1653|Homo sapiens VARS2L protein variant
protein.
Length = 1653
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 599 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 651
>AB067472-1|BAB67778.1| 1098|Homo sapiens KIAA1885 protein protein.
Length = 1098
Score = 35.9 bits (79), Expect = 0.82
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1038 RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAP 1090
RH LP HS S Q E P R R R++Q ++ GE K+P
Sbjct: 52 RHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSP 104
>BC111751-1|AAI11752.1| 973|Homo sapiens piwi-like 2 (Drosophila)
protein.
Length = 973
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSAS--HATFRDYYQNKYGVTITQSKQPLL 365
+ + ++ W +P F + TF +YY YG+T+ + QPLL
Sbjct: 427 YRIDDVDWNKTPKDSFTMSDGKEITFLEYYSKNYGITVKEEDQPLL 472
>BC025995-1|AAH25995.1| 973|Homo sapiens piwi-like 2 (Drosophila)
protein.
Length = 973
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSAS--HATFRDYYQNKYGVTITQSKQPLL 365
+ + ++ W +P F + TF +YY YG+T+ + QPLL
Sbjct: 427 YRIDDVDWNKTPKDSFTMSDGKEITFLEYYSKNYGITVKEEDQPLL 472
>AF104260-1|AAC97371.2| 861|Homo sapiens HIWI protein.
Length = 861
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSA--SHATFRDYYQNKYGVTITQSKQPLL 365
+ V +I W +P S F A S +F +YY+ +Y IT KQP+L
Sbjct: 317 YRVDDIDWDQNPKSTFKKADGSGVSFLEYYRKQYNQEITDLKQPVL 362
>AB079367-1|BAC81342.1| 973|Homo sapiens PIWIL2 protein.
Length = 973
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSAS--HATFRDYYQNKYGVTITQSKQPLL 365
+ + ++ W +P F + TF +YY YG+T+ + QPLL
Sbjct: 427 YRIDDVDWNKTPKDSFTMSDGKEITFLEYYSKNYGITVKEEDQPLL 472
>AB079368-1|BAC81343.1| 882|Homo sapiens PIWIL3 protein.
Length = 882
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPSA--SHATFRDYYQNKYGVTITQSKQPLL 365
+ V +I W+ +P+ F + S T+ DYY+ ++ +T KQPLL
Sbjct: 332 YRVDDIDWKQNPEDTFNKSDGSKITYIDYYRQQHKEIVTVKKQPLL 377
>BC031060-1|AAH31060.1| 852|Homo sapiens piwi-like 4 (Drosophila)
protein.
Length = 852
Score = 33.9 bits (74), Expect = 3.3
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPS--ASHATFRDYYQNKYGVTITQSKQPLL 365
+ + +I W + P F + T+ DYY+ +Y +T++ QP+L
Sbjct: 311 YSIDDIDWSVKPTHTFQKRDGTEITYVDYYKQQYDITVSDLNQPML 356
>AK093475-1|BAC04179.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ36156 fis, clone TESTI2025546, weakly similar to
Mus musculus mRNA for MIWI (piwi). ).
Length = 852
Score = 33.9 bits (74), Expect = 3.3
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPS--ASHATFRDYYQNKYGVTITQSKQPLL 365
+ + +I W + P F + T+ DYY+ +Y +T++ QP+L
Sbjct: 311 YSIDDIDWSVKPTHTFQKRDGTEITYVDYYKQQYDITVSDLNQPML 356
>AB079366-1|BAC81341.1| 852|Homo sapiens PIWIL1 protein.
Length = 852
Score = 33.9 bits (74), Expect = 3.3
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVFPS--ASHATFRDYYQNKYGVTITQSKQPLL 365
+ + +I W + P F + T+ DYY+ +Y +T++ QP+L
Sbjct: 311 YSIDDIDWSVKPTHTFQKRDGTEITYVDYYKQQYDITVSDLNQPML 356
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2480
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 1037 PRHLAALPHTHSTSEQRETSAEP-PPARRRV---GSLPPYRDRQGNWVQQVYGELKAPPS 1092
PRH THS + T P PP RRR GS+P Y + Q G L+ P S
Sbjct: 665 PRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSS 724
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2464
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 1037 PRHLAALPHTHSTSEQRETSAEP-PPARRRV---GSLPPYRDRQGNWVQQVYGELKAPPS 1092
PRH THS + T P PP RRR GS+P Y + Q G L+ P S
Sbjct: 665 PRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSS 724
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2448
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 1037 PRHLAALPHTHSTSEQRETSAEP-PPARRRV---GSLPPYRDRQGNWVQQVYGELKAPPS 1092
PRH THS + T P PP RRR GS+P Y + Q G L+ P S
Sbjct: 665 PRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSS 724
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2432
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 1037 PRHLAALPHTHSTSEQRETSAEP-PPARRRV---GSLPPYRDRQGNWVQQVYGELKAPPS 1092
PRH THS + T P PP RRR GS+P Y + Q G L+ P S
Sbjct: 665 PRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSS 724
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2416
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 1037 PRHLAALPHTHSTSEQRETSAEP-PPARRRV---GSLPPYRDRQGNWVQQVYGELKAPPS 1092
PRH THS + T P PP RRR GS+P Y + Q G L+ P S
Sbjct: 665 PRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSS 724
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2400
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 1037 PRHLAALPHTHSTSEQRETSAEP-PPARRRV---GSLPPYRDRQGNWVQQVYGELKAPPS 1092
PRH THS + T P PP RRR GS+P Y + Q G L+ P S
Sbjct: 665 PRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSS 724
>AK096837-1|BAC04873.1| 666|Homo sapiens protein ( Homo sapiens
cDNA FLJ39518 fis, clone PUAEN2001188, moderately
similar to Mus musculus mRNA for MIWI (piwi). ).
Length = 666
Score = 33.5 bits (73), Expect = 4.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 322 FLVAEICWRLSPDSVF--PSASHATFRDYYQNKYGVTITQSKQPLL 365
+ + +I W + P F + T+ DYY+ +Y +T++ QP+L
Sbjct: 125 YSIDDIDWSVKPTHTFLKRDGTEITYVDYYKQQYDITVSDLNQPML 170
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-like
protein 1 protein.
Length = 2464
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 1037 PRHLAALPHTHSTSEQRETSAEP-PPARRRV---GSLPPYRDRQGNWVQQVYGELKAPPS 1092
PRH THS + T P PP RRR GS+P Y + Q G L+ P S
Sbjct: 665 PRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSS 724
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.134 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,024,765
Number of Sequences: 224733
Number of extensions: 6515840
Number of successful extensions: 13571
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 13509
Number of HSP's gapped (non-prelim): 83
length of query: 1126
length of database: 73,234,838
effective HSP length: 98
effective length of query: 1028
effective length of database: 51,211,004
effective search space: 52644912112
effective search space used: 52644912112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 71 (32.7 bits)
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