Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001832-TA|BGIBMGA001832-PA|IPR001650|Helicase,
C-terminal, IPR005034|Protein of unknown function DUF283
(1139 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 50 2e-06
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 37 0.014
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 36 0.043
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 35 0.074
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 33 0.17
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 33 0.23
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 33 0.30
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 33 0.30
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 32 0.40
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 32 0.40
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 32 0.40
SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 32 0.40
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 32 0.52
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 31 0.69
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 31 0.69
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 31 0.91
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 31 0.91
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 31 1.2
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 31 1.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 1.2
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 31 1.2
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 31 1.2
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 31 1.2
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 30 1.6
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 30 1.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 1.6
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 30 2.1
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 30 2.1
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 30 2.1
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 30 2.1
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 30 2.1
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 29 2.8
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 29 2.8
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 2.8
SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pomb... 29 2.8
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 29 2.8
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 29 3.7
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 29 3.7
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 3.7
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 29 3.7
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 29 4.9
SPAC19G12.13c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 4.9
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 29 4.9
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 29 4.9
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 29 4.9
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 28 6.4
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 28 6.4
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 28 6.4
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 28 6.4
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 28 6.4
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 28 6.4
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 28 6.4
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 28 6.4
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 28 6.4
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 8.5
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 8.5
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 28 8.5
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 8.5
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 28 8.5
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 711 KKHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
++ +D L KF+ + N+L+ATA EEGID+P CNLV+R++
Sbjct: 410 RRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFN 449
Score = 29.9 bits (64), Expect = 2.1
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 1000 YCGKLPSDTFTRLAPQCWTDKVRLPGRDGVERDAYICTLRLPLNCPVKYNIVGHPMPSRV 1059
+C L D +TR P +T + L G Y + LP C V G P S
Sbjct: 544 FCNTLSRDVYTRYYPT-FTAQPCLSGW-------YCFEVELPKACKVPA-AQGSPAKSIR 594
Query: 1060 LARRMVALQACRILHRSGELDDQLQPIGKENFKAAELDSRDSSE 1103
A++ A C L R G +D L+P+ K A+L++ + E
Sbjct: 595 KAKQNAAFIMCLDLIRMGLIDKHLKPLDFRR-KIADLETLEEDE 637
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 37.1 bits (82), Expect = 0.014
Identities = 26/100 (26%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 140 KQADNS--EDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPNEITCDSDIGSLKD 197
KQ D+S E+S++ +S + + E++ ++E SE ++ + + +E + S ++
Sbjct: 32 KQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEE 91
Query: 198 TKTDLEQDIVAEDKSLESENIDDFDMYEKLEWKIEQLENE 237
+T+ E+D D+S ESE+ + + E+ E + E E+E
Sbjct: 92 EETESEEDSEVSDES-ESESESESESEEESESEEESDESE 130
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/100 (18%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 134 EDIHNDKQADNSEDSNKRDSCNL-----KDMLIEEDKHDNERSEKDMRHSQTDSPNEITC 188
E+ + ++++SE+ ++ + + K + ED + S ++ ++++ +E++
Sbjct: 45 EESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSD 104
Query: 189 DSDIGSLKDTKTDLEQDIVAEDKSLESENIDDFDMYEKLE 228
+S+ S +++++ E++ +E++S ESE +K E
Sbjct: 105 ESE--SESESESESEEESESEEESDESERSGPSSFLKKPE 142
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 35.5 bits (78), Expect = 0.043
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 484 TDKENFASLNNAVNVVADL----CGSTENVKNGDNGGRLNNTSPNETDNTQVKTEPDEEK 539
T +ENF SL NA+ D C V+ N + TD K E+
Sbjct: 768 TLRENFDSLQNAIMETFDKQVTHCSVNHLVQQIRKLKDENKKDQSGTDKLMKKIYHCEQS 827
Query: 540 IKSKTLELLSAI-EKCDFAYLADRIEDKVNAYEANLKEIDVYIDKCDRDGDSEPNETGAQ 598
+K KT L + + EK + L D A + L+ + + + G S P+E
Sbjct: 828 LKEKTNSLETLVSEKKELKNLLDAERRSKKAIQLELENLSSQAFRRNLSGSSSPSERSQS 887
Query: 599 EERKSSYCNEK 609
E K +EK
Sbjct: 888 RELKLLQASEK 898
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 34.7 bits (76), Expect = 0.074
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 138 NDKQADNSEDSNKRDSCNLKDM-LIEEDK-HDNERSEKDMRH--SQTDSPNEITCDSDIG 193
N ++ ++ ++SNK +S NL D+ ++EE K HDN E + + P
Sbjct: 26 NIEEPEHHDNSNK-ESTNLDDLNMLEEPKYHDNSNKESTNLDDLNMLEEPEHHDNSKKES 84
Query: 194 SLKDTKTDLEQDIVAEDKSLESENIDDFDMYEK 226
+ D LE+ ++ + ES N+DD +M E+
Sbjct: 85 TNLDDSNMLEEPKHHDNSNKESTNLDDLNMSEE 117
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 139 DKQADNSEDSNKRDSCNLKDMLIEE-DKHDNERSEKDMRH--SQTDSPNEITCDSDIGSL 195
D ++S+D NK +S + IEE + HDN E + + P + +
Sbjct: 5 DITLEHSDDLNKEESGESNRVNIEEPEHHDNSNKESTNLDDLNMLEEPKYHDNSNKESTN 64
Query: 196 KDTKTDLEQDIVAEDKSLESENIDDFDMYEK 226
D LE+ ++ ES N+DD +M E+
Sbjct: 65 LDDLNMLEEPEHHDNSKKESTNLDDSNMLEE 95
Score = 29.1 bits (62), Expect = 3.7
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 78 MTDLSLCEA-EKYDDVYDWYAELDKKEIMQVYKDSEESKRPRILSLTYPLFGSHKKFEDI 136
+ DL++ E E +D+ LD +++ K + S + +L K D
Sbjct: 65 LDDLNMLEEPEHHDNSKKESTNLDDSNMLEEPKHHDNSNKEST-NLDDLNMSEEPKHHDS 123
Query: 137 HNDKQADNSEDSNKRDSCNLKDMLIEEDKHDNE-RSE--KDMRHSQTDSPNEITCDSDI 192
N K++ N ++SN +S N K+ IEE K + R+E K S+ + P E+ +S I
Sbjct: 124 SN-KESTNLDNSNMDESENQKNFKIEEPKPSGDFRNEGPKQCDDSKIEKP-ELHVNSKI 180
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 33.5 bits (73), Expect = 0.17
Identities = 27/121 (22%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 129 SHKKFEDIHNDKQADNSEDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPNEITC 188
+ K +++ + + + + SN++ + N + L+ K D+ ++ +D + + E++
Sbjct: 4000 NEKLWDEPNEEDLLETEQKSNEQSAANNESDLV--SKEDDNKALEDKDRQEKEDEEEMS- 4056
Query: 189 DSDIGSLKDTKTDLEQDIVAEDKSLESENIDDFDMYEKLEWKIEQLENELCCKMDLAEDI 248
D+G + D +++ DI + EN D D+ E L K+++ E ++ DL ED+
Sbjct: 4057 -DDVG-IDD---EIQPDIQENNSQPPPENEDHLDLPEDL--KLDEKEGDVSKDSDL-EDM 4108
Query: 249 D 249
D
Sbjct: 4109 D 4109
Score = 33.5 bits (73), Expect = 0.17
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 1/144 (0%)
Query: 75 LRIMTDLSLCEAEKYDDVYDWYAELDKKEIMQVYKDSEESKRPRILSLTYPLFGSHKKFE 134
L + DL L E E ++D + + ++++ K + PL ++ E
Sbjct: 4084 LDLPEDLKLDEKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDFEDPLEENNTLDE 4143
Query: 135 DIHNDKQADNSEDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPNEITCDSDIG- 193
DI D +D +ED K + ++ + E ++ + + D Q + P + D+
Sbjct: 4144 DIQQDDFSDLAEDDEKMNEDGFEENVQENEESTEDGVKSDEELEQGEVPEDQAIDNHPKM 4203
Query: 194 SLKDTKTDLEQDIVAEDKSLESEN 217
K T E D DK + EN
Sbjct: 4204 DAKSTFASAEADEENTDKGIVGEN 4227
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 135 DIHNDKQADNSEDSNKRDSCNLKDMLIEEDKHDNERS--EKDMRHSQTDSPNEITCDSDI 192
D+ D + D E +DS +L+DM +E + E + EKD + P E D
Sbjct: 4085 DLPEDLKLDEKEGDVSKDS-DLEDMDMEAADENKEEADAEKDEPMQDFEDPLEENNTLDE 4143
Query: 193 GSLKDTKTDLEQDIVAEDKSLESENIDD 220
+D +DL +D ++ EN+ +
Sbjct: 4144 DIQQDDFSDLAEDDEKMNEDGFEENVQE 4171
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 711 KKHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
K + +K+F+ E N L+AT+ EEG+D+ ++++ +D
Sbjct: 479 KLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYD 518
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 32.7 bits (71), Expect = 0.30
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 708 RQNKKHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
R ++ E L+ FR ++++ATA G+D+P V+ +D
Sbjct: 464 RTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYD 506
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 133 FEDIHNDKQADNSE--DSNKRDSCNLKDMLIEEDKHDNERS---EKDMRHSQTDSPNEIT 187
+ H D D S + K S K ++ D D +R+ E H Q S
Sbjct: 3 YPSFHEDPTKDESTVAEQRKGQSNEEKPLIDLNDSLDEQRNAYNEHCKNHDQQPSQQVRN 62
Query: 188 CDSDIGSLKDTKTDLEQDIVAEDKSLESENIDD 220
+ + + T + +Q+++ E +SL+ EN +D
Sbjct: 63 MEDEANQYEQTDSSSDQEVMNEKQSLDKENRND 95
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 32.3 bits (70), Expect = 0.40
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 801 QQQEDEADTFTGLIKPYAPNDNKKHVLRMEPSIDHMKDSKKETKLSENYVTVSDVSDVNE 860
+ Q+D D + K +++ E D + + +E +++EN V++ + +
Sbjct: 385 EPQKDSKDDSEKVEKETEVERKEENEAEAEAVFDDWEAALEEPEVAENNEVVTEKKETDI 444
Query: 861 LND--KRNVKEKDDKKIEWTKTEDV----DVISNKSESDL-CQTCNDSDPCPSEVSKVYS 913
+D + ++K+K+D K + K +D+ SN SESDL C + +K+
Sbjct: 445 KSDAVEHSIKDKEDSKTD--KVDDIPQAAPAESNVSESDLRSPICCILGHVDTGKTKLLD 502
Query: 914 DLKYDVKCENETGG 927
+L+ E E GG
Sbjct: 503 NLRRSNVQEGEAGG 516
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 838 DSKKETKLSENYVT-VSDVSDVNELN-DKRNVKEKDDKKIEWTKTEDVDVISNKSESDLC 895
D + + LSE Y VS S + N ++NV++++ +KI + + +SN + L
Sbjct: 44 DLEPSSMLSEGYYGFVSQPSGSSNSNKQEKNVQQQNPEKISTLQQVKEEEVSNTFSAPLN 103
Query: 896 QTCNDSDPCPSEVSKVYSDLK 916
T N S P+ + Y DL+
Sbjct: 104 ATGNFSSANPASIDLAYLDLQ 124
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 712 KHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
K E+ L KFR E +L+AT L GID +V+ +D
Sbjct: 326 KREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFD 364
>SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 314
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 125 PLFGSHKKFEDIHNDKQADNSEDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPN 184
P+FGS KK+ D+ ND +N E++ R NL D + + E++E+++ + N
Sbjct: 167 PVFGS-KKYFDVINDSNVENKEETKDR---NL-DRALSKFTQSREKNEQNLSSKASVLRN 221
Query: 185 EITCDSDIGSLKDTKTDLEQDIVAEDKS 212
+ + + +T+ E+D A + S
Sbjct: 222 KKSILLKKRNQDETQLTTEEDFSANNDS 249
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 31.9 bits (69), Expect = 0.52
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 476 HVILESGNTDKENFASLNNAVNVVADLCGSTENVKNGDNGGRLNNTSPNETD-NTQVKTE 534
H++ + ++++ N +L S + ++ LN E D N ++K
Sbjct: 582 HILDMAVESERQKLLLTNKRYKAQIELLNSEIDKHRSESQAALNRRVKWENDFNNKIKAL 641
Query: 535 PDEEKI-KSKTLELLSAIE------------KCDFAYLADRIEDKVNAYEANLKEIDVYI 581
+E+K KS+ EL S+IE + D A+ +++E K+ YE LKE + ++
Sbjct: 642 REEKKAWKSEESELKSSIESLISQLESIRNSQIDIAFSKNQLELKLQLYETKLKEYEQHL 701
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 31.5 bits (68), Expect = 0.69
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 160 LIEEDKHDNE--RSEKDMRHS------QTDSPNEITCDSDIGSLKDTKTDLEQDIVAEDK 211
L+ EDK + E RSE D +S QT + N SL DLE I + +
Sbjct: 375 LLPEDKEEYEGLRSEADKLNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLHE 434
Query: 212 SLESENIDDFDMYEKLEWKIEQLENE 237
S+ S + + D+ K+ KIE LE E
Sbjct: 435 SVSSLDTERADLLAKINEKIESLELE 460
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 134 EDIHNDKQADNSEDSNKRDSCNLKDMLIEEDKHDNERSE-KDMRHSQTDSPNEITCDSD 191
E+I +KQ N +S+ ++ + + I ++ +N R + +++S TD+ ++ DSD
Sbjct: 408 EEITKNKQKQNFNESDLKNMASRIETFINDEASNNHREDFYGVKNSDTDTDSDSLADSD 466
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 31.1 bits (67), Expect = 0.91
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 812 GLIKPYAPNDNKKHVLRMEPSIDHMKDSKKETKLSENYVTVSD-VSDVNELNDKRNVKEK 870
GL++P+ DN+ ++ E I + K++++L++ V + + + +R V
Sbjct: 80 GLLEPFDAEDNEAKKMKREKEILRQQRQKRKSELTQLSQKVKEKFKKMRKKPARRIVTIA 139
Query: 871 DDKKIEWTKTEDVDVISNKSESDLCQTCNDSDPCPSEVSKVYSDLKYDV 919
+D++ E +T D D KS + N +D S +S + + DV
Sbjct: 140 NDEEEEDDQTMDEDAFERKSMQGELKERNLTDK-TSTLSTSFGETSPDV 187
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 127 FGSHKKFEDIHNDKQADNSEDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPNE 185
F K+ + H D + + S+D + S N + +EE K DN E + S ++SP E
Sbjct: 68 FRQRKEELESHVDSEIETSKDES---SVNKVEEKVEEFKEDNVEQEIKQKRSLSESPQE 123
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 168 NERSEKDMRHSQTDSPNEITCDSDIGSLKDTKTDLEQDIVAEDKSLESENIDDFDMYEKL 227
NE+ +D+R S T PNE D ++ +K+ + ++++ +D+ LE + +
Sbjct: 85 NEKEPRDVRISLTFQPNEYLQDDNLTLVKEVR--IKEEKAKDDEGLEKKITKYTSQPVDI 142
Query: 228 EWK 230
WK
Sbjct: 143 HWK 145
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 7/127 (5%)
Query: 103 EIMQVYKDSEESKRPRILSLTYPLFGSHKKFEDIHNDKQADNSEDSNKRDSCNLKDMLIE 162
E + V +S + ++ L+ PL S FED+ AD ED + + E
Sbjct: 632 EDVNVNLESISNTNESVVDLSDPLV-SKNGFEDVERSSVADLEEDV-----LETRSSIFE 685
Query: 163 EDKHDNERSEKDMRHSQTDSPNEIT-CDSDIGSLKDTKTDLEQDIVAEDKSLESENIDDF 221
D+ + D S S +E + +++ + D S E EN+DDF
Sbjct: 686 TSDIDDRLTVIDRSQSVVPSESEFSIAGANLTRRNAVDFSVSLDTYELYVSDEVENVDDF 745
Query: 222 DMYEKLE 228
++ LE
Sbjct: 746 SLFPSLE 752
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/134 (17%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Query: 140 KQADNSEDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPNEITC-DSDIGSLKDT 198
K+A + E S K K EE ++E + S +E + +S+ S + +
Sbjct: 59 KRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESS 118
Query: 199 KTDLEQDIVAE-----DKSLESENIDDFDMYEKLEWKIEQLENELCCKMDLAEDIDTGKR 253
++ E++++ + + S ES + + + E+ KIE+ + + ++
Sbjct: 119 SSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESE 178
Query: 254 TAAASTKPNELIVE 267
++++ ++ E +VE
Sbjct: 179 SSSSESEEEEEVVE 192
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 90 DDVYDWYAELDK-KEIMQVYKDSEESKRPRILSLTYPLFGSHKKFEDIHNDKQADNSEDS 148
+D+ + +AE K EI QV +D +++ + + +LT +N ++ D +ED
Sbjct: 256 EDITELFAEQVKCSEIAQVVRDEQDTAKDPVKALT-----------STNNVEEEDPAEDI 304
Query: 149 NKR-DSCNLKDMLIEEDKHDNERSEKDMRHSQTD 181
K S + L ++++ N SEKD + TD
Sbjct: 305 GKIIASGQTRAYLAQKEREKNGESEKDEKPDNTD 338
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Query: 142 ADNSEDSNKRDSCNLKDML-IEEDKHDNERSEKDMRHSQTDSPNEITCDSDIGSLK-DTK 199
++ +E N NL++ + E+K + + K H + + + D G + D K
Sbjct: 400 SEKTEAKNADSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVK 459
Query: 200 TDLEQDIVAEDKSLESENIDDFDMYEKLEWK 230
I A DK ++++ + D E+ E K
Sbjct: 460 AKETDSIEANDKDEKTDSKETEDKVEETESK 490
Score = 29.1 bits (62), Expect = 3.7
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 493 NNAVNVVADLCGSTENVKNGDNGGRLNNTSPNETDNTQV--KTEPDEEKIKSKTLELLSA 550
NN ++ D+ + N D G + ETD+ + K E + K +E +
Sbjct: 430 NNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEETES 489
Query: 551 IEKCDFAYLADRIEDKVNAYEANLKEIDVYIDKCDRDGDSEPNETGAQEERKSSYCNEK 609
E A D IE + + KE DK ++ + NE A+++ K + NEK
Sbjct: 490 KEADVKAKETDSIEVDDKEEKTDSKET---ADKVEQTDSKDTNEKPAKDDNKEA--NEK 543
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/129 (20%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 139 DKQADNSEDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPNEITCDSDIGSLKDT 198
++ A + + ++ R S N D+L +D + + + + S DS NE D+ I +D
Sbjct: 22 EQDAASVKINSTRASPNGSDLL-NDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGEDG 80
Query: 199 KTDLEQDIVAEDKSLESENIDDFDMYEKLEWKIEQLENELCCKMDLAEDIDT--GKRTAA 256
+ ++ DK + +N+++ + E+ + E+ E+E + D ++ ++ G+R A
Sbjct: 81 NENEVDNVNNNDKKEDEDNVEENE--EEADANEEEEEDEEDDEEDEEDEDESGGGRRKRA 138
Query: 257 ASTKPNELI 265
+ N+ +
Sbjct: 139 RHDRRNQFL 147
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
Query: 97 AELDKKEIMQVYKDSE--ESKRPRILSLTYPLFGSHKKFEDIHNDKQADNSEDSNKRDSC 154
+ LD + I Q Y+ E S I S+ + + + H+ K ++ K
Sbjct: 886 SNLDMQGITQKYRFLELITSTWSAISSIHVLTITNDRDMDLEHSLKVLLDNVTVEKSPFA 945
Query: 155 NLKDMLIEEDKHDNERSEKDMRHSQTDSPNEITCDSDIGSLKDTKTDLEQDIVAEDK--S 212
L+++ + K + E + S N+ DS++ L + T LE +V +DK S
Sbjct: 946 QLEELEVVRKKREAEIEASSKTVKRLASNNKFLTDSNVEGLLEAPTSLENSLVEDDKWAS 1005
Query: 213 LESENIDDFDMYEKLE 228
L + D+ +K+E
Sbjct: 1006 LRQKIKAARDLLKKVE 1021
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 869 EKDDKKIEWTKTEDVDVISNKSESDLCQTCNDSDPCPSEVSKVYSDLKYD 918
E + + W E+ + + E + C+ PS+VS++Y LKYD
Sbjct: 634 EVEQVQSRWCCNENPALFRERWEKLFSEFCDSEKADPSKVSELYDTLKYD 683
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Query: 804 EDEADTFTGLIKPYAPNDNKKHVLRMEPSIDHMKDSKKETKLSENYVTVSDVSDVNELND 863
E E + G I Y N + K + + + +E + S + T ++++N D
Sbjct: 398 EQENKSLKGSIDEYQNNLSSK-----DKMVKQVSSQLEEARSSLAHAT-GKLAEINSERD 451
Query: 864 KRNVKEKDDKKIEWTKTEDVDVISNKSESDLCQTCNDSDPCPSEVSKVYSDLKYDVKCEN 923
+N K KD +KIE +D+ N S ++L + D E++ + +K K
Sbjct: 452 FQNKKIKDFEKIE----QDLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSE 507
Query: 924 ETGGSV 929
T S+
Sbjct: 508 STQSSL 513
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 167 DNERSEKDMRHSQTDSPNEITCDSDIGSLKDTKTD------LEQDIVAED-----KSLES 215
D E+ E+D+R S NE+ S + KD + + EQ V+E +SL+
Sbjct: 459 DFEKIEQDLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSLQR 518
Query: 216 ENIDDFDMYEKLEWKIEQLENELCCKMDLAEDIDTGKRTAAA 257
+ +++ +E E ++ +L+ EL ++ +E + + T AA
Sbjct: 519 DILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLSTLAA 560
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 717 LKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
L+ FR +CN LLAT GID+ +V+ ++
Sbjct: 547 LEDFRDGKCNYLLATDVASRGIDIKGIEVVINYE 580
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 517 RLNNTSPNETDNTQVKTEPDEEKIKSKTLELLSAIEKCDFAYL-ADRIEDKVNAYEANLK 575
++N PN DN+ + +P+EEK+ S ++E D Y A I K+ N+
Sbjct: 89 KVNGLFPN--DNSVIALKPNEEKLNSSL-----SVENNDSTYTDATLIAPKIGLDRPNIN 141
Query: 576 EIDVYIDKCDRDGDSEPNETGAQEERKSSYCNEKIPQPHLDPL 618
I + D DG S NE + ++ S ++ + + D L
Sbjct: 142 AITI-----DVDGHSLQNEISSSTDKLSPSQSDALFEQKQDSL 179
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 717 LKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
L +FR +L+AT G+D+P LV+ +D
Sbjct: 301 LGRFRAEAAKILVATDVASRGLDIPSVQLVINFD 334
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 485 DKENFASLNNAVNVVADLCGST--ENVKNG-----DNGGRLNNTSPNETDNTQVKTE 534
D +N +S NA V + G+ +N DNG NT+ N DNTQ T+
Sbjct: 759 DSQNESSQENATYTVVESNGNANGDNTATNSQGATDNGQTTTNTTQNNVDNTQATTD 815
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 29.9 bits (64), Expect = 2.1
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 111 SEESKRPRILSLTYPLFGSHKKFEDIHNDKQADNSEDSNKRDSCNLKDMLIEEDKHDNER 170
S++ + P++L+ F + + I ++ S+D + D +L+D EE+ DNE
Sbjct: 579 SKKWENPQLLAQLKSRFITGSLLDSIEGQEEV--SQDDEEGDFEDLED---EENSSDNEM 633
Query: 171 SEKDMRHSQTDSPNEITCDSDIGSLKDTKTDLEQDI-VAEDKSLESENIDDFDMYEK-LE 228
E S + NE + D D +T+ E++ E+ L E D D +K ++
Sbjct: 634 EESS--GSSVTAENEESADE-----VDFQTEREENARKKEELRLRFEEEDRGDPEKKDVD 686
Query: 229 WKIEQLE---NELCCKMDLAEDIDTGKR 253
W E+ E +L + ED+D R
Sbjct: 687 WYTEEKEKIARQLVINREAFEDMDPESR 714
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 708 RQNKKHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
+ ++ E +++ R ++L+AT GID+P +LVL ++
Sbjct: 550 KSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYN 592
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 709 QNKKHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
+ + + ++ FR+ +L+ T + GID+ + NLV+ +D
Sbjct: 387 EGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYD 428
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 838 DSKKETKLSENYVTVSDV-SDVNELNDKRNVKEKD--DKK--IEWTKTEDVDVISNKSE- 891
+++ E++L E V + S+ NEL +K +++EKD D K +E + + V+S K+E
Sbjct: 917 NNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGELESLRENNATVLSEKAEF 976
Query: 892 SDLCQTCNDS----DPCPSEVSKVYSDLKYDVK 920
++ C++ ++ D +++K SD K +++
Sbjct: 977 NEQCKSLQETIVTKDAELDKLTKYISDYKTEIQ 1009
>SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pombe|chr
3|||Manual
Length = 983
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 992 ERWQTFVLYCGKLPSDTFTRLAP 1014
E W TF++Y KLP +TFT L P
Sbjct: 687 ELWSTFLMYIQKLP-ETFTLLIP 708
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 840 KKETKLSENYVTVSDVSDVNELNDK-RNVKEKDDKKIEWTKTEDVDVISNKSESDLCQTC 898
KKET++ E + D LN + + D++ ++W + K+++ +
Sbjct: 74 KKETEVHEKPSQLPDSGLNYGLNIRVASSSAADNEIVDWKANNS----NEKAQNKIATNK 129
Query: 899 NDSDPCPSEVSKVYSDLKYDVKCEN 923
+D P EV V +DL DVK N
Sbjct: 130 ESTDILPEEVQLVLNDLNDDVKSAN 154
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 858 VNELNDKRNVKEKDDKKIEWTKTEDVDVISNKSESDLCQTCNDSDPCPSEVSKVYSDLKY 917
+ E++D+ KEK KK++ T TE ++ NK++ T N S+ E + Y L
Sbjct: 238 IEEVDDESEKKEKKTKKVKETTTETEEL--NKTKP--IWTRNPSEVTKEEYASFYKSLTN 293
Query: 918 D 918
D
Sbjct: 294 D 294
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 29.1 bits (62), Expect = 3.7
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 28 LAVEYSNFIATRLVYEEAYKIRGSLYDNKQRSVHVTREDRIKCTAYDLRIMTDLSLCEAE 87
L +E +N + T+ E+ K + + + Q + RE ++ +L DL EAE
Sbjct: 109 LLIEAANNLKTQKQIEDLKKEKEEMEGSLQGKEKLERE--VENLRKELDKYKDLVETEAE 166
Query: 88 KYDDVYDWYAELDKKEIMQVYKDSEESKRPRILSLTYPLFGSHKKFEDIHNDKQADNSED 147
K + E E ++YKD E+ I LT + + + +D QA +E
Sbjct: 167 KRAAITKEECEKSWLEQQKLYKDMEQENASTIQKLTSKI--RELQASQLDHDLQASQNES 224
Query: 148 S 148
+
Sbjct: 225 A 225
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.1 bits (62), Expect = 3.7
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 129 SHKKFEDIHNDKQADNSEDSNKRDSCNLKDMLIEEDKH--DNERSEKDMRHSQTDSPNEI 186
S+K ++ K+ + S++ CN + +E+ H DN +SE + S D
Sbjct: 745 SYKSLQEQLASKKIEVQNVSSQLSICNSQ---LEQSNHIVDNLKSENLLLTSVKDK---- 797
Query: 187 TCDSDIGSLKDTKTDLEQDIVAEDKSLESENIDDFDMYEKLEWKIEQLENEL 238
+D+ +L+ + L+QD +ES N + + + +I +L N+L
Sbjct: 798 -LKADLSNLESKLSSLQQDNFHMKAQIESSNQEYTATVDSMNSRILELSNDL 848
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 140 KQADNSEDSNKRDSCNLKDMLI--EEDKHDNERSEKDMRH 177
K +D+SE S++ + NLK + H+N S+KD+ H
Sbjct: 257 KSSDSSETSHESSNSNLKKSSESGSTNHHNNHESDKDLHH 296
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 141 QADNSEDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPNEITCDSDIGSLKDTKT 200
+ D SEDSN +ED N S+ D + + + +T DI S + +K
Sbjct: 582 KGDQSEDSNDHIEVVPVASAHDEDDDWNSDSDNDENNVEIVTAEAMTLAQDIASRRKSKA 641
Query: 201 DL 202
DL
Sbjct: 642 DL 643
>SPAC19G12.13c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 677 LSRCHPKLSYVCAQYCAVENPEESLEPRECQRQNKKHEDVLKKF 720
+++ P + +Y + N E LE E +RQN ED L K+
Sbjct: 79 ITQTQPDSQQILWEYSLISNALERLENIELERQNCMREDGLVKY 122
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 703 PRECQRQNKKHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRW 749
P Q KK L+KF+ + +L+ T GID+P V+ +
Sbjct: 418 PLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAARGIDIPSVTHVIHY 464
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 717 LKKFRMHECNLLLATAALEEGIDLPRCNLVL 747
L F+ +C +L+AT G+D+P+ LV+
Sbjct: 459 LNDFKSGKCPVLVATDVAARGLDIPKVQLVI 489
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 717 LKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
+ FR+ + NLL+ T GID+P V+ +D
Sbjct: 389 INNFRLGKTNLLVVTDVASRGIDIPLLANVINYD 422
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 314 LYEEFKNIPDPTNEPKMMFKQFLHVLEELGPYAADKAAFSILTKLEK-LKIKVPYERHFL 372
L E ++N P T + + K ++H+ E KAA +L +L++ +K+
Sbjct: 370 LTEAYENAPQSTIISECLAKYYIHLKEYEYAIGLSKAALEVLKRLQQDTGVKLDKLTRIF 429
Query: 373 LLCL 376
LCL
Sbjct: 430 QLCL 433
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/132 (22%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 129 SHKKFEDIHN-DKQADNSEDSN---KRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPN 184
S++ F++ +N D++ED KR ++ L+E D++ E EK +
Sbjct: 3 SNENFDNDYNLPPPNDSAEDLKIFIKRYERSVDSTLLEIDENKREALEKYIEERDRKMKY 62
Query: 185 EITCDSDIGSLKDTKTDLEQDIVAEDKSLESEN---IDDF------DMYEKLEWKIEQLE 235
EI C+ + K K +E++I +E++S E + ID++ ++E++ K++ ++
Sbjct: 63 EIECNERLQGWK--KLAIEREI-SEEQSGEVQFPRWIDEWANTKLGGIFERIFSKMDSMQ 119
Query: 236 NELCCKMDLAED 247
N++ + D ++
Sbjct: 120 NDMNSRFDAMQN 131
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 712 KHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
+ + ++ +FR +L+ T L GID+ + +LV+ +D
Sbjct: 296 QRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYD 334
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 28.3 bits (60), Expect = 6.4
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 108 YKDSEESKRPRILSLTYPLFGSHKK--FEDIHNDKQADNSED--SNKRDSCNLKDMLIEE 163
Y++ ++S R S+ PL G K NSE S K++ + ++
Sbjct: 637 YRNPKKSAAARGHSIMQPLAGGLSKGYVPGSTYSGVPMNSEQFTSKKQEEIPVDELFFYR 696
Query: 164 DKHDNERSEKDMRHSQTDSPNEITCDSDI--GSLKDTKTDLEQDIVAEDKSLESENIDD- 220
+D K R ++ D E D D +L D+K LE D E+ +SE +D
Sbjct: 697 FFNDKYIKGKQARKTKVDRDEEGEIDEDEVWKALVDSKPQLEMD--EEESDFDSEEMDKA 754
Query: 221 -FDMYEKLEWKIEQLENE 237
DM E ++ +NE
Sbjct: 755 MTDMGSDSEQSADENDNE 772
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/132 (22%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 129 SHKKFEDIHN-DKQADNSEDSN---KRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPN 184
S++ F++ +N D++ED KR ++ L+E D++ E EK +
Sbjct: 3 SNENFDNDYNLPPPNDSAEDLKIFIKRYERSVDSTLLEIDENKREALEKYIEERDRKMKY 62
Query: 185 EITCDSDIGSLKDTKTDLEQDIVAEDKSLESEN---IDDF------DMYEKLEWKIEQLE 235
EI C+ + K K +E++I +E++S E + ID++ ++E++ K++ ++
Sbjct: 63 EIECNERLQGWK--KLAIEREI-SEEQSGEVQFPRWIDEWANTKLGGIFERIFSKMDSMQ 119
Query: 236 NELCCKMDLAED 247
N++ + D ++
Sbjct: 120 NDMNSRFDAMQN 131
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 146 EDSNKRDSCNLKDMLIEEDKHDNERSE--KDMRHSQTDSPNE 185
ED DSCN K + +++ K D E E K + +Q DS E
Sbjct: 38 EDVGTDDSCNKKFLEVQKQKEDEEDEEILKGVDLTQQDSVRE 79
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 711 KKHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
K+ + +++ FR +L+ T GID+ + +LV+ +D
Sbjct: 297 KERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYD 336
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/39 (28%), Positives = 25/39 (64%)
Query: 712 KHEDVLKKFRMHECNLLLATAALEEGIDLPRCNLVLRWD 750
+ ++ + +FR N L+AT+ EEG+D+ ++++ +D
Sbjct: 519 QQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYD 557
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 854 DVSDVNELNDKRNVKEKDDKKIEWTKTEDVDVISNK--SESDLCQTCNDSDPCPSEVSKV 911
D S E+N K+ ++E++D+ +E +K + NK S +++ +T + V ++
Sbjct: 195 DESQGTEINLKQKIEEENDEILEDSKESKDENEENKETSTTNVAETDAPEEETVDTVEEI 254
Query: 912 YSDLKYDVKCEN 923
+ K+ VK E+
Sbjct: 255 ADEEKHSVKEES 266
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 114 SKRPRILSLTYPLFGSHKKFEDIHNDKQADNSEDSNKRDSCNLK---DMLIEEDKHDNER 170
S I S T S F + N + ++ +SNK DS LK D I E+ +
Sbjct: 128 SSHETIASATSLFENSSSNFSEDPNKPNSSDAFESNKEDSPLLKSFNDSAIPENAANLSS 187
Query: 171 SEKDMRHSQTDS 182
S K+M+ S S
Sbjct: 188 SSKNMKDSTLSS 199
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 483 NTDKENFASLNNAVNVVADLCGSTENV-KNGDNGGRLNNTSPNETDNTQVKTEPDEEKIK 541
N DK +LN ++ AD S E++ KN N +L + + N Q K + K
Sbjct: 823 NQDKNQIETLNERISAAADELSSMESINKNQANELKL---AKQKCSNLQEKINFGNKLAK 879
Query: 542 SKTLELLSAIEK 553
T E +S++EK
Sbjct: 880 EHT-EKISSLEK 890
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 82 SLCEAEKYDDVYDWYAELDKKEIMQVYKDSEESKRPRILSL--TYPLFGSHKKFEDIHND 139
S C+A + D+ E D K+++++Y + +E++ + L L Y + E + ND
Sbjct: 295 SFCQATWHGDLSPCKLEGDSKKLVEMYLNYQENEPEKALELEKRYGKRIIDRLVEQVKND 354
Query: 140 KQAD 143
++A+
Sbjct: 355 EEAE 358
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/114 (17%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Query: 140 KQADNSEDSNKRDSCNLKDMLIEED-KHDNERSEKDMRHSQTDSPNEITCDSDIGSLKDT 198
+Q + K+ + + L+E D +++NE D S ++++ + D K+
Sbjct: 284 RQIKIKKSKKKKSKSDRRKRLVELDAENENENDPSDFVLPNGQSNSDLSVEQDSAIFKEQ 343
Query: 199 KTDLEQDIVAEDKSLESENIDDFDMYEKLEWKIEQLENELCCKMDLAEDIDTGK 252
K Q + E ++ + DD ++ ++ Q ++ D+AE + +
Sbjct: 344 KKMKIQKRMRELETQSFADDDDLQQSIAMQRRLAQKRAKILKPEDVAEQLQNAE 397
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 528 NTQVKTEPDEEKIKSKT-LELLSAIEKCDFAYLADRIEDKVNAYEANLKEIDVYIDKCDR 586
NT+ I S+ L S++ DFA + I+ +V +E + ++DV I R
Sbjct: 115 NTRAAANLRNNSINSEAALSTTSSLLDDDFARRLEEIDRQVQEFEKSSSDMDVQIHTHKR 174
Query: 587 DGDSEPNETGA 597
+ + + + T A
Sbjct: 175 EIEEDDDNTSA 185
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,322,946
Number of Sequences: 5004
Number of extensions: 241286
Number of successful extensions: 971
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 895
Number of HSP's gapped (non-prelim): 109
length of query: 1139
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1058
effective length of database: 1,957,154
effective search space: 2070668932
effective search space used: 2070668932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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