Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001831-TA|BGIBMGA001831-PA|IPR001660|Sterile alpha motif
SAM, IPR010993|Sterile alpha motif homology
(142 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16056| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-04
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 41 5e-04
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_46461| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.013
SB_28884| Best HMM Match : SAM_2 (HMM E-Value=1.4e-24) 33 0.12
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_25904| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_12380| Best HMM Match : SAM_2 (HMM E-Value=1.6e-14) 32 0.16
SB_3759| Best HMM Match : UPF0181 (HMM E-Value=1.8) 32 0.16
SB_45206| Best HMM Match : SAM_2 (HMM E-Value=2.8e-05) 31 0.37
SB_54970| Best HMM Match : SAM_1 (HMM E-Value=3.4) 30 0.64
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 30 0.84
SB_45874| Best HMM Match : TIR (HMM E-Value=0.43) 29 1.1
SB_5466| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_42167| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 28 2.6
SB_18419| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_7357| Best HMM Match : SAM_2 (HMM E-Value=3e-12) 28 3.4
SB_33729| Best HMM Match : SAM_1 (HMM E-Value=0.00081) 28 3.4
SB_54428| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_45977| Best HMM Match : MBT (HMM E-Value=0) 27 4.5
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 27 5.9
SB_17285| Best HMM Match : rve (HMM E-Value=1.3e-16) 27 5.9
SB_1699| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7) 27 5.9
SB_27115| Best HMM Match : SAM_1 (HMM E-Value=1.7e-08) 27 5.9
SB_24353| Best HMM Match : CUB (HMM E-Value=0.18) 27 5.9
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_2890| Best HMM Match : rve (HMM E-Value=0.044) 27 5.9
SB_31038| Best HMM Match : NifT (HMM E-Value=0.76) 27 7.9
>SB_16056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 66 VVDALSFPIAFKWTEEEVASWAEDIGF-PQYKECFTDNNINGLRLLMFEDPSNLPCIGI 123
+VD P++ +W+ EEV W E+IG+ YKE DN I+G LL+ + +GI
Sbjct: 1 MVDEEKLPVS-QWSSEEVGLWLENIGYGDYYKEFVNDNRIDGQVLLILTENDLKDSLGI 58
>SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 41.1 bits (92), Expect = 3e-04
Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 78 WTEEEVASWAEDIGFPQYKECFTDNNINGLRLLMFEDPSNLPCIGIHDFIDILIRRPPLD 137
WT EEV +W E IG QY E F +N I+G L L + I D D D
Sbjct: 326 WTVEEVCTWLESIGLAQYSEVFRNNAIDGHELSNMTGNVLLTDLTIDDDDDAAAAAAD-D 384
Query: 138 EDPDA 142
+D DA
Sbjct: 385 DDDDA 389
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 40.7 bits (91), Expect = 5e-04
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 78 WTEEEVASWAEDIGFPQYKECFTDNNINGLRL 109
WT EEV +W E IG QY E F +N I+G L
Sbjct: 608 WTVEEVCTWLESIGLAQYSEVFRNNAIDGHEL 639
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 77 KWTEEEVASWAEDIGFPQYKECFTDNNINGLRL 109
+W+ ++V SW E +GF QY E F +N+I G L
Sbjct: 1860 EWSCDDVCSWLESLGFHQYVETFRENDIQGCHL 1892
>SB_46461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 817
Score = 35.9 bits (79), Expect = 0.013
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 78 WTEEEVASWAEDIGFPQYKECFTDNNINGLRLLMFE--DPSNLP-CIGIHDFIDILIRRP 134
WT ++V W I +Y + D+ ++G +++ E P + C+ IH +I+ R
Sbjct: 645 WTNDKVMRWCRSIDLQEYADNLRDSGVHGAMMVINETFGPDEMANCLAIHPSKNIIRRHL 704
Query: 135 PLDEDPD 141
D D D
Sbjct: 705 TRDVDDD 711
>SB_28884| Best HMM Match : SAM_2 (HMM E-Value=1.4e-24)
Length = 257
Score = 32.7 bits (71), Expect = 0.12
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 86 WAEDIGFPQYKECFTDNNINGLRL 109
W EDIG P YK+ F+D ++G L
Sbjct: 2 WLEDIGLPHYKDAFSDACVDGRML 25
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 32.7 bits (71), Expect = 0.12
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 78 WTEEEVASWAEDIGFPQYKECFTDNNINGLRL 109
WTEE+ W + +G ++E F +++NG L
Sbjct: 784 WTEEDAREWLDFVGLGHFREQFKAHHVNGRTL 815
>SB_25904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 32.7 bits (71), Expect = 0.12
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 73 PIAFKWTEEEVASWAEDIGFPQYK 96
P KW E+VA W E +GF QY+
Sbjct: 31 PSCIKWIIEDVAEWIEYLGFKQYR 54
>SB_12380| Best HMM Match : SAM_2 (HMM E-Value=1.6e-14)
Length = 218
Score = 32.3 bits (70), Expect = 0.16
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 78 WTEEEVASWAEDIGFPQYKECFTDNNINGLRLLMFE--DPSNLP-CIGIHDFIDILIR 132
WT ++V W I +Y + D+ ++G +++ E P + C+ IH +I+ R
Sbjct: 98 WTNDKVMRWCRSIDLQEYADNLRDSGVHGAMMVINETFGPDEMANCLAIHPSKNIIRR 155
>SB_3759| Best HMM Match : UPF0181 (HMM E-Value=1.8)
Length = 110
Score = 32.3 bits (70), Expect = 0.16
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 79 TEEEVASWAEDIGFPQYKECFTDNNINGLRLLMFEDP 115
TE + SW E I P+Y + F+D+++ G L F P
Sbjct: 6 TEADCRSWIESIQLPKYVKTFSDSSVYGPMLEAFIHP 42
>SB_45206| Best HMM Match : SAM_2 (HMM E-Value=2.8e-05)
Length = 169
Score = 31.1 bits (67), Expect = 0.37
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 58 TLYELAANVVDALSFPIAFKWTEEEVASWAEDIG--FPQYKECFTDNNINGLRLLM---- 111
TL + + +S P+ WT E+V+ W +G Y + F D+ ING+ L+
Sbjct: 44 TLAMILTSTEPLVSKPVT-SWTPEDVSKWVAGLGPWTKGYGQKFLDSGINGMVLVSLTET 102
Query: 112 -FEDPSNLPCIGIH 124
EDP + IH
Sbjct: 103 DLEDPPLEMKVAIH 116
>SB_54970| Best HMM Match : SAM_1 (HMM E-Value=3.4)
Length = 110
Score = 30.3 bits (65), Expect = 0.64
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 99 FTDNNINGLRLLMFEDPSNLPCIGIHDF 126
F+DN +NG RL+ D S LP +G+ DF
Sbjct: 11 FSDNLVNGRRLIQV-DASTLPRMGVTDF 37
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 29.9 bits (64), Expect = 0.84
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 16 VPARIPNFPSPDKSTCAECSCYPIEEPYQKNKKLKPCQISPLTLYELAANVVDALSFPIA 75
+PA NF + D+ C C C ++ PYQ L C + N+++A FP+
Sbjct: 1936 LPAADANFLAEDQELCPACFC-EVDNPYQ----LATC--GHVYCRGCVTNLIEAKQFPLT 1988
Query: 76 FKWTEEEVASWAEDIGFPQYKECFTDNNI 104
+ + D+ KEC N+I
Sbjct: 1989 CAYEDCSTLLAIHDV--DNLKECDIVNDI 2015
>SB_45874| Best HMM Match : TIR (HMM E-Value=0.43)
Length = 876
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 68 DALSFPIAFKWTEEEVASWAEDIG 91
D + P KW +E+VA W DIG
Sbjct: 795 DVVDRPDVSKWKKEDVAKWLSDIG 818
>SB_5466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 78 WTEEEVASWAEDIGFPQYKECFTDNNINGLRL 109
W +V +W ++G +Y N +NG +L
Sbjct: 426 WDVNQVVTWMNNLGLEEYSGTVKQNKVNGAKL 457
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 77 KWTEEEVASWAEDIGFPQYKECFTDNNINGLRLLMFEDPSNLPCIGIHD 125
+W E+V SW F + E F D + G +L + S L +GI+D
Sbjct: 128 EWAVEDVMSWLAVTHFYTFAELFRDAEMMGSKLKSMNEAS-LSELGIND 175
>SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1743
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 80 EEEVASWAEDIGFPQYKECFTDNNINGLRLLMFEDPSNLPCIGIHDFIDIL 130
+E + W E++ Y T N + +F+D LP IG+ +++L
Sbjct: 547 KEVLTGWLEELDLESYFRYMTTLNARSVVCRVFKDKHLLPWIGVEIALNVL 597
>SB_42167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 77 KWTEEEVASWAEDIGFPQYKECFTDNNINGLRLLMFEDPS 116
+W E+V SW F + E F D I+G +L + S
Sbjct: 39 EWAVEDVMSWLAVTHFYTFAELFRDAEIDGSKLKSMNEAS 78
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 28.3 bits (60), Expect = 2.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 21 PNFPSPDKSTCAECSCYPIEEPY 43
PN P K CA C+ Y + P+
Sbjct: 344 PNITCPTKKCCANCTAYTFDGPF 366
>SB_18419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 78 WTEEEVASWAEDIGFPQYKECFTDNNINGLRLLM 111
W ++VA++ IG Y E F I+G LL+
Sbjct: 845 WNMQDVANFMLSIGCSNYAEAFIKEEIDGKALLL 878
>SB_7357| Best HMM Match : SAM_2 (HMM E-Value=3e-12)
Length = 410
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 83 VASWAEDIGFPQYKECFTDNNINGLRLLMFEDPSNLPCIG---IHDFIDIL 130
V W +G QY + F DN + L + +L IG I D +DIL
Sbjct: 5 VEDWLRSLGLIQYTQEFLDNGYDELDICKEIGEEDLDAIGVENIRDRVDIL 55
>SB_33729| Best HMM Match : SAM_1 (HMM E-Value=0.00081)
Length = 196
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 77 KWTEEEVASWAEDIGFPQYKECFTDNNINGLRLLMFED 114
+W E+VAS+ + G F DN + G L +D
Sbjct: 41 EWNPEDVASFLDRSGHSDLIHIFKDNQVTGSDLAAIDD 78
>SB_54428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 100 TDNNINGLRLLMFEDPSNLPCIGIHDFIDILIRRP 134
T+ NIN L L ++D S I D +D I RP
Sbjct: 316 TEKNINKLNLAKYDDDSKQGLILEVDLVDSAIHRP 350
>SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1301
Score = 27.5 bits (58), Expect = 4.5
Identities = 22/97 (22%), Positives = 37/97 (38%)
Query: 46 NKKLKPCQISPLTLYELAANVVDALSFPIAFKWTEEEVASWAEDIGFPQYKECFTDNNIN 105
N + P +SP + + D S I + V+ A+ G ECF+D++ +
Sbjct: 256 NGSVLPVNLSPNNFHVSNVDGDDFQSHHIKESIPDNHVSKVAKSPGVQDGFECFSDSDDD 315
Query: 106 GLRLLMFEDPSNLPCIGIHDFIDILIRRPPLDEDPDA 142
+ PSNLP + + +P D A
Sbjct: 316 FESFQSSQVPSNLPAYKSSTSVQVSNNQPSNHNDKHA 352
>SB_45977| Best HMM Match : MBT (HMM E-Value=0)
Length = 1198
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 77 KWTEEEVASWAEDIGFPQYKECFTDNNINGLRLLM 111
KW ++V D+G P + F + I+G LL+
Sbjct: 1137 KWDVDDVVKHITDLGCPDQAKIFKEQQIDGEALLL 1171
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 17 PARIPNFPSPDKSTCAECSCYPIEEPYQKNKKLKPCQISPLTL 59
PA P P+PD +T A EEP +K P +TL
Sbjct: 1151 PATTPGVPTPDLATAALALQVSPEEPDAAEEKQGPSTPEAMTL 1193
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 17 PARIPNFPSPDKSTCAECSCYPIEEPYQKNKKLKPCQISPLTL 59
PA P P+PD +T A EEP +K P +TL
Sbjct: 1519 PATTPGVPTPDLATAALALQVSPEEPDAAEEKQGPSTPEAMTL 1561
>SB_17285| Best HMM Match : rve (HMM E-Value=1.3e-16)
Length = 560
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 17 PARIPNFPSPDKSTCAECSCYPIEEPYQKNKKLKPCQISPLTL 59
PA P P+PD +T A EEP +K P +TL
Sbjct: 489 PATTPGVPTPDLATAALALQVSPEEPDAAEEKQGPSTPEAMTL 531
>SB_1699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 8/32 (25%)
Query: 95 YKECFTDNNINGLRLLMFEDPSNLPCIGIHDF 126
Y +CFT+N +N + L +FED G+HDF
Sbjct: 144 YLKCFTNNKVNTV-LSLFED-------GVHDF 167
>SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7)
Length = 477
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 17 PARIPNFPSPDKSTCAECSCYPIEEPYQKNKKLKPCQISPLTL 59
PA P P+PD +T A EEP +K P +TL
Sbjct: 229 PATTPGVPTPDLATAALALQVSPEEPDAAEEKQGPSTPEAMTL 271
>SB_27115| Best HMM Match : SAM_1 (HMM E-Value=1.7e-08)
Length = 527
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 78 WTEEEVASWAEDIGFPQYKECFTDNNINGLRL 109
W+ ++V+ + I +Y E F +N I+G+ L
Sbjct: 454 WSIDDVSEFLRSIKLDKYVEVFRENQIDGMLL 485
>SB_24353| Best HMM Match : CUB (HMM E-Value=0.18)
Length = 564
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 89 DIGFPQYKECFTDNNINGLRLLMFEDPSNLP--CIGIHDFIDILIRRPPLD 137
D+G Y + +DNNI+ +R+ ++ + L C G H R P D
Sbjct: 385 DLGKCNYSQSCSDNNIDTVRVFIYNKNTTLRLYCGGFHRLSPSSFRAPGRD 435
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 17 PARIPNFPSPDKSTCAECSCYPIEEPYQKNKKLKPCQISPLTL 59
PA P P+PD +T A EEP +K P +TL
Sbjct: 1495 PATTPGVPTPDLATAALALQVSPEEPDAAEEKQGPSTPEAMTL 1537
>SB_2890| Best HMM Match : rve (HMM E-Value=0.044)
Length = 336
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 17 PARIPNFPSPDKSTCAECSCYPIEEPYQKNKKLKPCQISPLTL 59
PA P P+PD +T A EEP +K P +TL
Sbjct: 265 PATTPGVPTPDLATAALALQVSPEEPDAAEEKQGPSTPEAMTL 307
>SB_31038| Best HMM Match : NifT (HMM E-Value=0.76)
Length = 619
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 75 AFKWTEEEVASWAEDIGFPQYKECF--TDNNINGLRLLMFED--PSNLPCIGIHDFIDIL 130
AF+ EE++S F +E TD ++ G+ ++ +D P LP + IH D L
Sbjct: 428 AFRNVMEEISSLGVLRYFDPKEETVIQTDASLKGIGAVLLQDGQPGQLPQLSIHQVTDTL 487
Query: 131 IRRP 134
P
Sbjct: 488 PASP 491
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.140 0.451
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,783,633
Number of Sequences: 59808
Number of extensions: 254325
Number of successful extensions: 446
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 39
length of query: 142
length of database: 16,821,457
effective HSP length: 75
effective length of query: 67
effective length of database: 12,335,857
effective search space: 826502419
effective search space used: 826502419
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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