Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001829-TA|BGIBMGA001829-PA|IPR006055|Exonuclease,
IPR013520|Exonuclease, RNase T and DNA polymerase III,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
(224 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB6C62 Cluster: PREDICTED: similar to XPMC2 prev... 167 1e-40
UniRef50_UPI00005884C7 Cluster: PREDICTED: hypothetical protein;... 162 7e-39
UniRef50_UPI00015B42FE Cluster: PREDICTED: hypothetical protein;... 161 1e-38
UniRef50_UPI000044938D Cluster: PREDICTED: hypothetical protein;... 161 1e-38
UniRef50_UPI0000ECA694 Cluster: UPI0000ECA694 related cluster; n... 161 1e-38
UniRef50_Q6DEW6 Cluster: RNA exonuclease 4; n=4; Euteleostomi|Re... 153 3e-36
UniRef50_Q9GZR2 Cluster: RNA exonuclease 4; n=16; Tetrapoda|Rep:... 153 3e-36
UniRef50_Q4SXK5 Cluster: Chromosome 15 SCAF12379, whole genome s... 150 2e-35
UniRef50_Q9VUC3 Cluster: CG6833-PA; n=2; Sophophora|Rep: CG6833-... 141 1e-32
UniRef50_Q7PQ12 Cluster: ENSANGP00000021838; n=2; Anopheles gamb... 137 2e-31
UniRef50_A2ALB1 Cluster: XPMC2 prevents mitotic catastrophe 2 ho... 134 2e-30
UniRef50_Q4PER6 Cluster: RNA exonuclease 4; n=1; Ustilago maydis... 134 2e-30
UniRef50_Q08237 Cluster: RNA exonuclease 4; n=6; Saccharomycetal... 131 1e-29
UniRef50_Q7F186 Cluster: Exonuclease-like protein; n=2; Oryza sa... 128 1e-28
UniRef50_Q9LK97 Cluster: Exonuclease-like protein; n=4; core eud... 126 3e-28
UniRef50_Q0CHU1 Cluster: RNA exonuclease 4; n=5; Eurotiomycetida... 125 1e-27
UniRef50_O94375 Cluster: RNA exonuclease 4; n=1; Schizosaccharom... 124 1e-27
UniRef50_Q01D40 Cluster: Xpmc2 protein; n=2; Ostreococcus|Rep: X... 124 2e-27
UniRef50_Q9HFB5 Cluster: MipD; n=1; Coprinopsis cinerea|Rep: Mip... 124 2e-27
UniRef50_Q9XXI3 Cluster: Putative uncharacterized protein; n=2; ... 122 9e-27
UniRef50_Q4WHF8 Cluster: RNA exonuclease 4; n=18; Fungi/Metazoa ... 122 9e-27
UniRef50_Q4IEV5 Cluster: RNA exonuclease 4; n=5; Pezizomycotina|... 119 7e-26
UniRef50_A5DHJ7 Cluster: Putative uncharacterized protein; n=1; ... 118 1e-25
UniRef50_Q5KJQ4 Cluster: RNA exonuclease 4; n=2; Filobasidiella ... 117 3e-25
UniRef50_Q4V7K3 Cluster: MGC115620 protein; n=5; Tetrapoda|Rep: ... 116 4e-25
UniRef50_A5E1X8 Cluster: RNA exonuclease 4; n=1; Lodderomyces el... 116 5e-25
UniRef50_A3GHY4 Cluster: 3'-5' exonuclease; n=1; Pichia stipitis... 116 5e-25
UniRef50_Q17KA7 Cluster: Exonuclease; n=1; Aedes aegypti|Rep: Ex... 116 6e-25
UniRef50_Q5A3Q0 Cluster: RNA exonuclease 4; n=2; Saccharomycetal... 115 8e-25
UniRef50_Q6CE69 Cluster: RNA exonuclease 4; n=1; Yarrowia lipoly... 109 7e-23
UniRef50_Q7S9B7 Cluster: RNA exonuclease 4; n=1; Neurospora cras... 109 7e-23
UniRef50_A2CF13 Cluster: Novel protein; n=2; Danio rerio|Rep: No... 107 3e-22
UniRef50_UPI0000E474E4 Cluster: PREDICTED: hypothetical protein;... 103 3e-21
UniRef50_Q9H9L3 Cluster: Interferon-stimulated 20 kDa exonucleas... 101 1e-20
UniRef50_UPI00004C0BB8 Cluster: PREDICTED: similar to interferon... 101 2e-20
UniRef50_UPI00005488F8 Cluster: PREDICTED: similar to LOC494737 ... 100 3e-20
UniRef50_Q54U94 Cluster: Putative uncharacterized protein; n=1; ... 99 4e-20
UniRef50_Q9BSA5 Cluster: Interferon stimulated exonuclease gene ... 99 4e-20
UniRef50_Q4S474 Cluster: Chromosome undetermined SCAF14743, whol... 100 6e-20
UniRef50_UPI000155C35F Cluster: PREDICTED: similar to HEM45; n=2... 97 2e-19
UniRef50_Q0TVG4 Cluster: Putative uncharacterized protein; n=1; ... 97 2e-19
UniRef50_Q63ZS9 Cluster: LOC494737 protein; n=2; Xenopus|Rep: LO... 97 3e-19
UniRef50_Q96AZ6 Cluster: Interferon-stimulated gene 20 kDa prote... 94 2e-18
UniRef50_Q01E67 Cluster: Exonuclease-like protein; n=2; Ostreoco... 93 5e-18
UniRef50_Q5MAV6 Cluster: Nucleolar mitotic checkpoint protein; n... 92 9e-18
UniRef50_Q9JL16 Cluster: Interferon-stimulated gene 20 kDa prote... 91 3e-17
UniRef50_A7SJI5 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 85 1e-15
UniRef50_Q22S54 Cluster: Exonuclease family protein; n=1; Tetrah... 83 5e-15
UniRef50_Q6CX99 Cluster: Similarities with sp|P53331 Saccharomyc... 80 5e-14
UniRef50_Q7REU4 Cluster: Unnamed protein product-related; n=5; P... 76 6e-13
UniRef50_A2D9N2 Cluster: Exonuclease family protein; n=1; Tricho... 75 2e-12
UniRef50_Q02524 Cluster: Nucleotide-binding protein; n=1; Schizo... 75 2e-12
UniRef50_A3FPM5 Cluster: Putative uncharacterized protein; n=2; ... 74 3e-12
UniRef50_A0CBQ5 Cluster: Chromosome undetermined scaffold_165, w... 73 8e-12
UniRef50_A3LWX8 Cluster: Predicted protein; n=1; Pichia stipitis... 72 1e-11
UniRef50_P53331 Cluster: RNA exonuclease 1 (EC 3.1.-.-) (RNase H... 72 1e-11
UniRef50_Q9FH89 Cluster: Emb|CAB62118.1; n=5; Arabidopsis thalia... 72 1e-11
UniRef50_Q0TVD4 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q017E2 Cluster: Exonuclease family protein; n=2; Ostreo... 71 3e-11
UniRef50_Q8SRL4 Cluster: Putative EXONUCLEASE; n=1; Encephalitoz... 71 3e-11
UniRef50_O94443 Cluster: Ribonuclease H70; n=1; Schizosaccharomy... 71 3e-11
UniRef50_A5DIP3 Cluster: Putative uncharacterized protein; n=1; ... 70 5e-11
UniRef50_Q6BJX1 Cluster: Similar to CA3219|IPF10003 Candida albi... 69 7e-11
UniRef50_Q6CEI3 Cluster: Yarrowia lipolytica chromosome B of str... 69 1e-10
UniRef50_Q9ZU79 Cluster: Expressed protein; n=3; Arabidopsis tha... 68 2e-10
UniRef50_Q25AL7 Cluster: H0212B02.12 protein; n=4; Oryza sativa|... 68 2e-10
UniRef50_Q4X025 Cluster: Exonuclease, putative; n=8; Eurotiomyce... 68 2e-10
UniRef50_Q8T023 Cluster: LD38414p; n=7; Sophophora|Rep: LD38414p... 67 3e-10
UniRef50_Q16RI6 Cluster: Rnase h; n=2; Culicini|Rep: Rnase h - A... 67 3e-10
UniRef50_Q6FTR3 Cluster: Similar to sp|P53331 Saccharomyces cere... 67 4e-10
UniRef50_Q014W5 Cluster: 3'-5' exonuclease; n=2; Ostreococcus|Re... 66 5e-10
UniRef50_A6S540 Cluster: Putative uncharacterized protein; n=1; ... 66 5e-10
UniRef50_A2R5A3 Cluster: Contig An15c0120, complete genome; n=1;... 66 5e-10
UniRef50_UPI0000E46A67 Cluster: PREDICTED: hypothetical protein;... 66 7e-10
UniRef50_A2E953 Cluster: Exonuclease family protein; n=1; Tricho... 66 7e-10
UniRef50_Q5AAW5 Cluster: Putative uncharacterized protein RNH70;... 66 7e-10
UniRef50_A4RNB0 Cluster: Putative uncharacterized protein; n=2; ... 66 9e-10
UniRef50_Q2H620 Cluster: Putative uncharacterized protein; n=2; ... 64 3e-09
UniRef50_A7ERC9 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q9GZR2-2 Cluster: Isoform 2 of Q9GZR2 ; n=2; Homo/Pan/G... 63 5e-09
UniRef50_A5DU41 Cluster: Putative uncharacterized protein; n=1; ... 63 5e-09
UniRef50_Q9LII7 Cluster: Exonuclease-like protein; n=7; Magnolio... 63 6e-09
UniRef50_Q569U5 Cluster: LOC733188 protein; n=2; Xenopus|Rep: LO... 62 8e-09
UniRef50_Q5K6U9 Cluster: Ribonuclease H, putative; n=2; Filobasi... 62 8e-09
UniRef50_A7ANV7 Cluster: Exonuclease family protein; n=1; Babesi... 62 1e-08
UniRef50_UPI00004CFDA9 Cluster: exonuclease NEF-sp; n=4; Xenopus... 62 1e-08
UniRef50_Q4P868 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q4SF45 Cluster: Chromosome 1 SCAF14609, whole genome sh... 61 2e-08
UniRef50_Q9VRX7 Cluster: CG8368-PA, isoform A; n=3; Coelomata|Re... 61 2e-08
UniRef50_A0BUQ6 Cluster: Chromosome undetermined scaffold_13, wh... 61 2e-08
UniRef50_O16312 Cluster: Putative uncharacterized protein; n=2; ... 60 3e-08
UniRef50_UPI0000F2CB48 Cluster: PREDICTED: similar to transcript... 60 4e-08
UniRef50_Q8IDV9 Cluster: Putative uncharacterized protein PF13_0... 60 6e-08
UniRef50_UPI00001E338C Cluster: PREDICTED: similar to REX1, RNA ... 59 8e-08
UniRef50_Q5KE53 Cluster: Putative uncharacterized protein; n=1; ... 59 8e-08
UniRef50_Q580Z1 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_Q174Z4 Cluster: Exonuclease nef-sp; n=2; Culicidae|Rep:... 59 1e-07
UniRef50_A2EBD2 Cluster: Exonuclease family protein; n=1; Tricho... 58 1e-07
UniRef50_Q4SMK5 Cluster: Chromosome 18 SCAF14547, whole genome s... 58 2e-07
UniRef50_A7S0U8 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 58 2e-07
UniRef50_Q96IC2 Cluster: Putative RNA exonuclease NEF-sp; n=25; ... 58 2e-07
UniRef50_Q9FNE7 Cluster: Exonuclease-like protein; n=2; Magnolio... 57 3e-07
UniRef50_Q8N1G1 Cluster: RNA exonuclease 1 homolog; n=39; cellul... 57 3e-07
UniRef50_Q0EWR1 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_Q5C620 Cluster: SJCHGC08852 protein; n=1; Schistosoma j... 57 4e-07
UniRef50_UPI0000D5597E Cluster: PREDICTED: similar to CG8368-PA,... 56 5e-07
UniRef50_A1L0Y1 Cluster: LOC100036702 protein; n=2; Xenopus trop... 56 5e-07
UniRef50_Q9U220 Cluster: Putative uncharacterized protein; n=3; ... 56 5e-07
UniRef50_Q54EC1 Cluster: Putative uncharacterized protein; n=1; ... 56 5e-07
UniRef50_Q9FTM4 Cluster: Putative uncharacterized protein P0005A... 56 7e-07
UniRef50_UPI00003C0619 Cluster: PREDICTED: similar to CG14801-PB... 56 9e-07
UniRef50_Q9SN09 Cluster: Putative uncharacterized protein F3A4.1... 56 9e-07
UniRef50_UPI0000519A04 Cluster: PREDICTED: similar to CG8368-PA,... 55 1e-06
UniRef50_Q5BXI2 Cluster: SJCHGC01934 protein; n=1; Schistosoma j... 54 2e-06
UniRef50_Q9P7H2 Cluster: RNA exonuclease 3; n=1; Schizosaccharom... 54 2e-06
UniRef50_Q8IX06 Cluster: Exonuclease GOR; n=21; Homo/Pan/Gorilla... 54 2e-06
UniRef50_Q5ZMH0 Cluster: Putative uncharacterized protein; n=3; ... 54 4e-06
UniRef50_UPI0000F2DC48 Cluster: PREDICTED: hypothetical protein;... 53 5e-06
UniRef50_Q013L2 Cluster: Exonuclease family protein; n=3; Ostreo... 53 5e-06
UniRef50_Q4QHI9 Cluster: Putative uncharacterized protein; n=3; ... 53 5e-06
UniRef50_Q17F53 Cluster: Rnase h; n=1; Aedes aegypti|Rep: Rnase ... 53 5e-06
UniRef50_A5K818 Cluster: Exonuclease, putative; n=1; Plasmodium ... 53 7e-06
UniRef50_Q0CUC0 Cluster: Predicted protein; n=1; Aspergillus ter... 53 7e-06
UniRef50_Q10124 Cluster: Putative RNA exonuclease pqe-1; n=8; Ca... 53 7e-06
UniRef50_A3GHV0 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 52 9e-06
UniRef50_UPI00005A2516 Cluster: PREDICTED: similar to transcript... 52 1e-05
UniRef50_Q5AL29 Cluster: RNA exonuclease 3; n=3; Saccharomycetal... 52 1e-05
UniRef50_Q7TSF9 Cluster: RIKEN cDNA 2610020H08 gene; n=2; Murina... 50 5e-05
UniRef50_Q12090 Cluster: RNA exonuclease 3; n=4; Saccharomycetal... 50 5e-05
UniRef50_UPI000023E3F6 Cluster: hypothetical protein FG03108.1; ... 50 6e-05
UniRef50_A7PU68 Cluster: Chromosome chr7 scaffold_31, whole geno... 49 8e-05
UniRef50_Q5KL74 Cluster: 3'-5' exonuclease, putative; n=1; Filob... 49 8e-05
UniRef50_Q2TXI8 Cluster: RIB40 genomic DNA, SC010; n=1; Aspergil... 49 8e-05
UniRef50_Q6CFE7 Cluster: RNA exonuclease 3; n=1; Yarrowia lipoly... 49 1e-04
UniRef50_Q4DG67 Cluster: Putative uncharacterized protein; n=2; ... 48 1e-04
UniRef50_UPI0000D8B54B Cluster: UPI0000D8B54B related cluster; n... 48 2e-04
UniRef50_Q3D960 Cluster: DnaQ family exonuclease/DinG family hel... 48 2e-04
UniRef50_Q7RX52 Cluster: Putative uncharacterized protein NCU050... 48 2e-04
UniRef50_Q0TU07 Cluster: Helicase, UvrD/REP/exonuclease family p... 47 3e-04
UniRef50_A6SIN6 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q6CJB5 Cluster: RNA exonuclease 3; n=2; Saccharomycetac... 47 4e-04
UniRef50_Q41GU3 Cluster: DNA polymerase III, epsilon subunit:Dna... 46 8e-04
UniRef50_A4VTT3 Cluster: Rad3-related DNA helicase; n=6; Strepto... 46 8e-04
UniRef50_Q5B523 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_A1KUV1 Cluster: DNA polymerase III, epsilon chain; n=4;... 44 0.002
UniRef50_Q26FQ2 Cluster: DNA polymerase III, epsilon subunit; n=... 44 0.004
UniRef50_Q5APK0 Cluster: PAB-dependent poly(A)-specific ribonucl... 44 0.004
UniRef50_O29290 Cluster: DNA polymerase III, subunit epsilon; n=... 42 0.009
UniRef50_Q81ST0 Cluster: DnaQ family exonuclease/DinG family hel... 42 0.012
UniRef50_Q55DD5 Cluster: Putative uncharacterized protein; n=1; ... 42 0.012
UniRef50_A2QKS9 Cluster: Remark: antibodies against GOR are pres... 42 0.012
UniRef50_Q7RBL5 Cluster: Putative uncharacterized protein PY0612... 42 0.016
UniRef50_Q1DHQ6 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_A2QW09 Cluster: Function: Rex1p of S. cerevisiae is req... 42 0.016
UniRef50_A5LFK6 Cluster: DNA polymerase III subunit epsilon; n=2... 41 0.022
UniRef50_Q9VB01 Cluster: CG12877-PA, isoform A; n=8; Diptera|Rep... 41 0.022
UniRef50_A1D8W3 Cluster: RNA exonuclease, putative; n=3; Trichoc... 41 0.028
UniRef50_Q4P5M2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.038
UniRef50_Q0A6Z2 Cluster: Putative PAS/PAC sensor protein precurs... 40 0.050
UniRef50_A0LZ46 Cluster: Exonuclease family protein; n=10; Flavo... 40 0.050
UniRef50_Q8L7M4 Cluster: Exonuclease-like protein; n=7; Magnolio... 40 0.050
UniRef50_A6RGR0 Cluster: Predicted protein; n=1; Ajellomyces cap... 40 0.050
UniRef50_P47729 Cluster: DNA polymerase III polC-type; n=1; Myco... 40 0.050
UniRef50_Q6KIN3 Cluster: DNA polymerase III alpha subunit; n=1; ... 40 0.066
UniRef50_A7FTJ8 Cluster: Helicase, UvrD/REP/exonuclease family p... 40 0.066
UniRef50_A6DK72 Cluster: DNA polymerase III; n=1; Lentisphaera a... 40 0.066
UniRef50_A0K225 Cluster: DNA polymerase III, epsilon subunit; n=... 40 0.066
UniRef50_Q4Q2Z3 Cluster: Putative uncharacterized protein; n=3; ... 40 0.066
UniRef50_Q23E97 Cluster: Putative uncharacterized protein; n=1; ... 40 0.066
UniRef50_Q8DWE0 Cluster: DNA polymerase III polC-type; n=60; Lac... 40 0.066
UniRef50_A4BWD8 Cluster: DNA polymerase III, epsilon subunit; n=... 39 0.087
UniRef50_P54394 Cluster: Probable ATP-dependent helicase dinG ho... 39 0.087
UniRef50_Q23AQ6 Cluster: Cation channel family protein; n=1; Tet... 39 0.11
UniRef50_Q2GQF2 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_A7EAD7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_UPI00006AA922 Cluster: hypothetical protein CHGG_08952;... 38 0.15
UniRef50_Q4G099 Cluster: Rad52 protein; n=10; Euteleostomi|Rep: ... 38 0.15
UniRef50_A6ESS3 Cluster: DNA polymerase III, epsilon subunit; n=... 38 0.15
UniRef50_Q4Q7T4 Cluster: Ubiquitin hydrolase, putative; n=5; Try... 38 0.15
UniRef50_A5K441 Cluster: Putative uncharacterized protein; n=2; ... 38 0.15
UniRef50_A5E1W0 Cluster: PAB-dependent poly(A)-specific ribonucl... 38 0.15
UniRef50_Q5KZZ7 Cluster: Hypothetical conserved protein; n=2; Ge... 38 0.20
UniRef50_Q0UDJ5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.20
UniRef50_Q6F1H8 Cluster: DNA polymerase III alpha subunit; n=5; ... 38 0.26
UniRef50_Q9EUN1 Cluster: Ycg4D; n=6; Bacteria|Rep: Ycg4D - Coryn... 38 0.26
UniRef50_Q15SW9 Cluster: Exonuclease, RNase T and DNA polymerase... 38 0.26
UniRef50_A1Z7K9 Cluster: CG8232-PA; n=4; Sophophora|Rep: CG8232-... 38 0.26
UniRef50_Q193G0 Cluster: DnaQ family exonuclease/DinG family hel... 37 0.35
UniRef50_Q03FN6 Cluster: Rad3-related DNA helicase; n=1; Pedioco... 37 0.35
UniRef50_Q00YG0 Cluster: Chromosome 11 contig 1, DNA sequence; n... 37 0.35
UniRef50_Q4UHA5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.35
UniRef50_Q96YR5 Cluster: DNA double-strand break repair rad50 AT... 37 0.35
UniRef50_Q9CGW0 Cluster: DNA polymerase III, epsilon chain; n=3;... 37 0.46
UniRef50_Q8EQD9 Cluster: ATP-dependent DNA helicase; n=1; Oceano... 37 0.46
UniRef50_A7K3S7 Cluster: DNA polymerase III, alpha subunit; n=2;... 37 0.46
UniRef50_A6ATQ8 Cluster: Gp41; n=4; Vibrio|Rep: Gp41 - Vibrio ha... 37 0.46
UniRef50_Q5CTD1 Cluster: Cus1p U2 snRNP protein; n=2; Cryptospor... 37 0.46
UniRef50_UPI0000DB7746 Cluster: PREDICTED: similar to CG8232-PA;... 36 0.61
UniRef50_UPI000023E8D0 Cluster: hypothetical protein FG08390.1; ... 36 0.61
UniRef50_Q5FJX1 Cluster: ATP-dependent DNA helicase; n=5; Lactob... 36 0.61
UniRef50_Q7QG93 Cluster: ENSANGP00000002784; n=3; Culicidae|Rep:... 36 0.61
UniRef50_Q6FPV2 Cluster: Similar to sp|P08964 Saccharomyces cere... 36 0.61
UniRef50_P53015 Cluster: Uncharacterized protein F31E3.4; n=2; C... 36 0.61
UniRef50_Q6C462 Cluster: PAB-dependent poly(A)-specific ribonucl... 36 0.61
UniRef50_Q5HP88 Cluster: Probable ATP-dependent helicase dinG ho... 36 0.61
UniRef50_Q97RK4 Cluster: DNA polymerase III, epsilon subunit/ATP... 36 0.81
UniRef50_Q4A745 Cluster: DNA polymerase III alpha subunit; n=1; ... 36 0.81
UniRef50_Q1MZX4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.81
UniRef50_A2TNW8 Cluster: DNA polymerase III, epsilon subunit; n=... 36 0.81
UniRef50_Q7R621 Cluster: GLP_81_22513_21725; n=1; Giardia lambli... 36 0.81
UniRef50_Q6CD76 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 36 0.81
UniRef50_Q2TZY8 Cluster: Predicted protein; n=1; Aspergillus ory... 36 0.81
UniRef50_O68045 Cluster: DNA polymerase III subunit epsilon-like... 36 0.81
UniRef50_Q7NAQ3 Cluster: CpsG; n=1; Mycoplasma gallisepticum|Rep... 36 1.1
UniRef50_A5IXK4 Cluster: DNA polymerase III alpha subunit; n=1; ... 36 1.1
UniRef50_Q8ILP6 Cluster: Glycine--tRNA ligase, putative; n=8; Pl... 36 1.1
UniRef50_Q238V8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q59QN1 Cluster: Putative uncharacterized protein; n=2; ... 36 1.1
UniRef50_Q5KHY2 Cluster: PAB-dependent poly(A)-specific ribonucl... 36 1.1
UniRef50_Q6FS70 Cluster: PAB-dependent poly(A)-specific ribonucl... 36 1.1
UniRef50_Q8UDP4 Cluster: DNA polymerase III, epsilon subunit; n=... 35 1.4
UniRef50_A6Q1S7 Cluster: DNA polymerase III, epsilon subunit; n=... 35 1.4
UniRef50_A4CM07 Cluster: DNA polymerase III, epsilon subunit; n=... 35 1.4
UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein; ... 35 1.4
UniRef50_Q23PY5 Cluster: Leucine Rich Repeat family protein; n=1... 35 1.4
UniRef50_A2E289 Cluster: Putative uncharacterized protein; n=2; ... 35 1.4
UniRef50_A7EY58 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_Q2SPW2 Cluster: Putative exonuclease; n=3; Hahella chej... 35 1.9
UniRef50_A5MUE3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_A4M5M6 Cluster: DNA polymerase III, alpha subunit; n=1;... 35 1.9
UniRef50_A1ZC44 Cluster: DNA polymerase III, epsilon subunit; n=... 35 1.9
UniRef50_Q22LM9 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q18263 Cluster: Putative uncharacterized protein; n=2; ... 35 1.9
UniRef50_A2ERV4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_A5E373 Cluster: Putative uncharacterized protein; n=4; ... 35 1.9
UniRef50_Q9WYW6 Cluster: DNA polymerase III, epsilon subunit, pu... 34 2.5
UniRef50_Q839U7 Cluster: DNA polymerase III, epsilon subunit; n=... 34 2.5
UniRef50_Q66BA7 Cluster: Similar to Orf81 bacteriophage 186; n=2... 34 2.5
UniRef50_Q8KQK8 Cluster: DNA polymerase III epsilon subunit; n=5... 34 2.5
UniRef50_A7H3V7 Cluster: Putative site-specific recombinase, pha... 34 2.5
UniRef50_A4C086 Cluster: DNA polymerase III subunit; n=2; Polari... 34 2.5
UniRef50_Q7RID0 Cluster: RNB-like protein, putative; n=8; Plasmo... 34 2.5
UniRef50_A7TJ26 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_A4QWG5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_UPI00006CB9FB Cluster: hypothetical protein TTHERM_0055... 34 3.3
UniRef50_A7LUS3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A0Y7J9 Cluster: Putative exonuclease; n=1; marine gamma... 34 3.3
UniRef50_Q7RLR0 Cluster: Erythrocyte binding protein homolog; n=... 34 3.3
UniRef50_Q4YSX4 Cluster: Putative uncharacterized protein; n=10;... 34 3.3
UniRef50_Q4XDT9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A7ANC1 Cluster: Exonuclease family protein; n=1; Babesi... 34 3.3
UniRef50_A5K9Q3 Cluster: Putative uncharacterized protein; n=2; ... 34 3.3
UniRef50_Q2GYE5 Cluster: Putative uncharacterized protein; n=4; ... 34 3.3
UniRef50_Q84F70 Cluster: Secreted alkaline metalloproteinase; n=... 34 3.3
UniRef50_UPI0000E4A335 Cluster: PREDICTED: similar to ubiquitin ... 33 4.3
UniRef50_UPI00006CCC8F Cluster: hypothetical protein TTHERM_0033... 33 4.3
UniRef50_Q3AAH9 Cluster: Putative DNA polymerase III, epsilon su... 33 4.3
UniRef50_A6ECG9 Cluster: DNA polymerase III, epsilon subunit; n=... 33 4.3
UniRef50_A4SW92 Cluster: Exonuclease, RNase T and DNA polymerase... 33 4.3
UniRef50_Q01H72 Cluster: PAB-dependent poly(A) ribonuclease, sub... 33 4.3
UniRef50_Q2F5U6 Cluster: Upf3 regulator of nonsense transcripts-... 33 4.3
UniRef50_Q29IM1 Cluster: GA12985-PA; n=2; pseudoobscura subgroup... 33 4.3
UniRef50_Q24G75 Cluster: Protein kinase domain containing protei... 33 4.3
UniRef50_Q22ZH8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_A2EUN2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_Q9ZHF6 Cluster: DNA polymerase III polC-type; n=3; Ther... 33 4.3
UniRef50_Q2Q0H1 Cluster: Putative DNA polymerase type III, exonu... 33 5.7
UniRef50_Q92AA9 Cluster: DinG protein; n=13; Listeria|Rep: DinG ... 33 5.7
UniRef50_Q8REC9 Cluster: ATP-dependent RNA helicase; n=2; Fusoba... 33 5.7
UniRef50_Q3CZR2 Cluster: Penicillin-binding protein 2b; n=8; Str... 33 5.7
UniRef50_Q1N495 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_Q03BY9 Cluster: DNA polymerase III, alpha subunit; n=1;... 33 5.7
UniRef50_A7A827 Cluster: Putative uncharacterized protein; n=2; ... 33 5.7
UniRef50_A6CHW6 Cluster: DNA polymerase III, alpha subunit; n=1;... 33 5.7
UniRef50_A3HRT4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A1Y2U5 Cluster: Transposase; n=3; Bacteria|Rep: Transpo... 33 5.7
UniRef50_A0L6G9 Cluster: Exonuclease, RNase T and DNA polymerase... 33 5.7
UniRef50_Q8IHX5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.7
UniRef50_Q7RQI9 Cluster: DEAD/DEAH box helicase, putative; n=6; ... 33 5.7
UniRef50_Q7R1J7 Cluster: GLP_38_10841_8949; n=1; Giardia lamblia... 33 5.7
UniRef50_Q54H40 Cluster: Putative uncharacterized protein; n=3; ... 33 5.7
UniRef50_Q22KL7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_Q228H1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A0DZZ0 Cluster: Chromosome undetermined scaffold_70, wh... 33 5.7
UniRef50_P53010 Cluster: PAB-dependent poly(A)-specific ribonucl... 33 5.7
UniRef50_Q09798 Cluster: PAB-dependent poly(A)-specific ribonucl... 33 5.7
UniRef50_Q9HMY5 Cluster: Probable porphobilinogen deaminase; n=1... 33 5.7
UniRef50_UPI0000F2E306 Cluster: PREDICTED: similar to chromosome... 33 7.5
UniRef50_UPI0000DB6FE2 Cluster: PREDICTED: similar to CG13980-PA... 33 7.5
UniRef50_UPI00006CCD08 Cluster: B-box zinc finger family protein... 33 7.5
UniRef50_UPI00006CAE89 Cluster: PHD-finger family protein; n=1; ... 33 7.5
UniRef50_Q4RIG2 Cluster: Chromosome 11 SCAF15043, whole genome s... 33 7.5
UniRef50_Q6MB40 Cluster: Putative heat shock protein 70, dnaK; n... 33 7.5
UniRef50_Q6FD40 Cluster: Bifunctional protein [Includes: ribonuc... 33 7.5
UniRef50_Q2B3X2 Cluster: ATP-dependent DNA helicase; n=2; Bacill... 33 7.5
UniRef50_Q11UG6 Cluster: DNA polymerase III, epsilon subunit; n=... 33 7.5
UniRef50_A6WH29 Cluster: Exonuclease RNase T and DNA polymerase ... 33 7.5
UniRef50_Q4ZCJ2 Cluster: ORF013; n=1; Staphylococcus phage 47|Re... 33 7.5
UniRef50_Q9W0B0 Cluster: CG7971-PC, isoform C; n=7; Endopterygot... 33 7.5
UniRef50_Q95ZS6 Cluster: Putative uncharacterized protein; n=5; ... 33 7.5
UniRef50_Q54GG4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q24CD3 Cluster: Leucine Rich Repeat family protein; n=1... 33 7.5
UniRef50_O44048 Cluster: Asparagine-rich protein; n=4; Plasmodiu... 33 7.5
UniRef50_A2FHE6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_A0DHA4 Cluster: Chromosome undetermined scaffold_50, wh... 33 7.5
UniRef50_A0CYV9 Cluster: Chromosome undetermined scaffold_31, wh... 33 7.5
UniRef50_A0CGN7 Cluster: Chromosome undetermined scaffold_18, wh... 33 7.5
UniRef50_Q9BHK6 Cluster: DNA-directed RNA polymerase; n=1; Sprag... 33 7.5
UniRef50_Q6C494 Cluster: Similarity; n=2; Eukaryota|Rep: Similar... 33 7.5
UniRef50_P62134 Cluster: DNA double-strand break repair rad50 AT... 33 7.5
UniRef50_A5DAD0 Cluster: PAB-dependent poly(A)-specific ribonucl... 33 7.5
UniRef50_Q754X1 Cluster: PAB-dependent poly(A)-specific ribonucl... 33 7.5
UniRef50_UPI00006CA9EC Cluster: hypothetical protein TTHERM_0032... 32 10.0
UniRef50_UPI000049A33F Cluster: hypothetical protein 476.t00003;... 32 10.0
UniRef50_UPI00004987D7 Cluster: hypothetical protein 29.t00018; ... 32 10.0
UniRef50_UPI000065E248 Cluster: PAB-dependent poly(A)-specific r... 32 10.0
UniRef50_Q9JFN3 Cluster: RNA polymerase; n=1; Tupaia paramyxovir... 32 10.0
UniRef50_Q99JJ9 Cluster: Usp52 protein; n=6; Deuterostomia|Rep: ... 32 10.0
UniRef50_Q14AD7 Cluster: E030019B06Rik protein; n=5; Murinae|Rep... 32 10.0
UniRef50_Q5HMK9 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
UniRef50_Q7VPU5 Cluster: Putative uncharacterized protein; n=2; ... 32 10.0
UniRef50_Q4V274 Cluster: Possible exonuclease; n=1; Bacillus cer... 32 10.0
UniRef50_Q1WSF5 Cluster: Exonuclease; n=1; Lactobacillus salivar... 32 10.0
UniRef50_A5IYM2 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
UniRef50_A5IU60 Cluster: Exonuclease, RNase T and DNA polymerase... 32 10.0
UniRef50_A4CLT9 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
UniRef50_A0NJE4 Cluster: DNA helicase, Rad3-related family; n=2;... 32 10.0
UniRef50_Q8ILU2 Cluster: Putative uncharacterized protein; n=2; ... 32 10.0
UniRef50_Q628G7 Cluster: Putative uncharacterized protein CBG003... 32 10.0
UniRef50_Q5BWF4 Cluster: SJCHGC04109 protein; n=1; Schistosoma j... 32 10.0
UniRef50_Q4Y1R0 Cluster: Putative uncharacterized protein; n=2; ... 32 10.0
UniRef50_Q4UBC4 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
UniRef50_Q24I87 Cluster: Cyclic nucleotide-binding domain contai... 32 10.0
UniRef50_Q235E3 Cluster: ABC transporter family protein; n=1; Te... 32 10.0
UniRef50_Q16XZ3 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
UniRef50_A2FSZ8 Cluster: Viral A-type inclusion protein, putativ... 32 10.0
UniRef50_A2DWZ3 Cluster: IPT/TIG domain containing protein; n=1;... 32 10.0
UniRef50_A0DKC0 Cluster: Chromosome undetermined scaffold_54, wh... 32 10.0
UniRef50_Q6FTU2 Cluster: Similar to sp|P53207 Saccharomyces cere... 32 10.0
UniRef50_Q6BPH3 Cluster: Debaryomyces hansenii chromosome E of s... 32 10.0
UniRef50_Q6BN86 Cluster: Similar to CA3255|IPF4729 Candida albic... 32 10.0
UniRef50_A5E796 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
UniRef50_P0C581 Cluster: PAB-dependent poly(A)-specific ribonucl... 32 10.0
UniRef50_Q504Q3 Cluster: PAB-dependent poly(A)-specific ribonucl... 32 10.0
UniRef50_P0A1G9 Cluster: DNA polymerase III subunit epsilon; n=8... 32 10.0
>UniRef50_UPI0000DB6C62 Cluster: PREDICTED: similar to XPMC2
prevents mitotic catastrophe 2 homolog; n=1; Apis
mellifera|Rep: PREDICTED: similar to XPMC2 prevents
mitotic catastrophe 2 homolog - Apis mellifera
Length = 278
Score = 167 bits (407), Expect = 1e-40
Identities = 81/146 (55%), Positives = 111/146 (76%), Gaps = 3/146 (2%)
Query: 69 KSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGND 128
KS Q + +K + L D H D+ + D +++ K+TK IA+DCEMVGIG DG +
Sbjct: 72 KSSPHQKSRKKHYSSILNVDHITSHNDEEVVFD--ESRKKLTKQIAIDCEMVGIG-DGTE 128
Query: 129 HMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIR 188
MLAR+S+VN+ G C+YDK+VKPRE V+DYRT VSGIR +L NGE+F IVQKEVA+++R
Sbjct: 129 SMLARISIVNRHGFCVYDKYVKPREPVQDYRTKVSGIRPHNLQNGEEFEIVQKEVAEILR 188
Query: 189 GKILVGHSLKNDLNVLFLSHPKRNIR 214
G+ILVGH+LK DL+VL+LSHP++++R
Sbjct: 189 GRILVGHALKYDLDVLYLSHPRKHLR 214
>UniRef50_UPI00005884C7 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 360
Score = 162 bits (393), Expect = 7e-39
Identities = 89/200 (44%), Positives = 126/200 (63%), Gaps = 13/200 (6%)
Query: 26 INANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKS--KDLQPTVRKFETL 83
+ +NW K LA+ L + PK + ++ E+K N+ D+ P + L
Sbjct: 108 VASNW-KALATKL---KASAPRNPKPKTKNSNASDKAVEKKENEIWFDDVDPAL-----L 158
Query: 84 NLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDC 143
E ++ + DIA Q NKITK +A+DCEMVGIG++G + +LARVS+VN++G C
Sbjct: 159 EAEKGSSEHNASDIAGAGAYQGDNKITKCVALDCEMVGIGHEGKESILARVSMVNEYGHC 218
Query: 144 IYDKFVKPREEVKDYRTIVSGIRKEDLI--NGEDFSIVQKEVADVIRGKILVGHSLKNDL 201
IYDKFVKPRE+V D+RT SG+R +DL N E+F VQKE+AD+++ +ILVGH+LKND+
Sbjct: 219 IYDKFVKPREKVTDFRTEFSGVRPKDLFKGNAEEFLTVQKEIADIMKDRILVGHALKNDM 278
Query: 202 NVLFLSHPKRNIRTHLSTNH 221
VLFL P++ IR S H
Sbjct: 279 KVLFLGQPRKLIRDTASYPH 298
>UniRef50_UPI00015B42FE Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 283
Score = 161 bits (392), Expect = 1e-38
Identities = 90/206 (43%), Positives = 127/206 (61%), Gaps = 16/206 (7%)
Query: 7 KRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQK 66
++K + + + LR + +NWQ L+ + P + + +RNRK Q
Sbjct: 26 QKKDVPASKKDANIGLR-IPGSNWQMF---KTLVTETSNETNPSDIQVKRKKRNRKRTQS 81
Query: 67 INKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNK-ITKFIAMDCEMVGIGYD 125
SK+ P + + ++ A + N++K+ N +TK +AMDCEMVGIG D
Sbjct: 82 ---SKEPAPK----QQIQVQQQAAKTETKE---NEKKEESNTGLTKVVAMDCEMVGIG-D 130
Query: 126 GNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVAD 185
G D M+ARVS+VN+ G C+YDK+VKP E+VKDYRT VSGI+ L G+DF +VQKEVA+
Sbjct: 131 GTDSMVARVSIVNRHGYCVYDKYVKPTEKVKDYRTAVSGIQPHHLETGQDFKVVQKEVAE 190
Query: 186 VIRGKILVGHSLKNDLNVLFLSHPKR 211
++RG+ LVGH+L NDL VLFLSHPKR
Sbjct: 191 ILRGRTLVGHALHNDLAVLFLSHPKR 216
>UniRef50_UPI000044938D Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 441
Score = 161 bits (391), Expect = 1e-38
Identities = 76/132 (57%), Positives = 96/132 (72%), Gaps = 2/132 (1%)
Query: 83 LNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGD 142
L LE Q+ + + + ++ + +T+ +AMDCEMVG+G G D ++ARVS+VN FG
Sbjct: 240 LGLEAGQSKQSVEQVLVKEK--SSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNLFGK 297
Query: 143 CIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLN 202
CIYDK+VKP EEV DYRT VSGIR E L GEDF VQKEVAD++ G+ILVGH+L NDL
Sbjct: 298 CIYDKYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADILNGRILVGHALHNDLK 357
Query: 203 VLFLSHPKRNIR 214
VLFL HPK+ IR
Sbjct: 358 VLFLDHPKKKIR 369
>UniRef50_UPI0000ECA694 Cluster: UPI0000ECA694 related cluster; n=2;
Gallus gallus|Rep: UPI0000ECA694 UniRef100 entry -
Gallus gallus
Length = 414
Score = 161 bits (391), Expect = 1e-38
Identities = 76/132 (57%), Positives = 96/132 (72%), Gaps = 2/132 (1%)
Query: 83 LNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGD 142
L LE Q+ + + + ++ + +T+ +AMDCEMVG+G G D ++ARVS+VN FG
Sbjct: 213 LGLEAGQSKQSVEQVLVKEK--SSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNLFGK 270
Query: 143 CIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLN 202
CIYDK+VKP EEV DYRT VSGIR E L GEDF VQKEVAD++ G+ILVGH+L NDL
Sbjct: 271 CIYDKYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADILNGRILVGHALHNDLK 330
Query: 203 VLFLSHPKRNIR 214
VLFL HPK+ IR
Sbjct: 331 VLFLDHPKKKIR 342
>UniRef50_Q6DEW6 Cluster: RNA exonuclease 4; n=4; Euteleostomi|Rep:
RNA exonuclease 4 - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 414
Score = 153 bits (372), Expect = 3e-36
Identities = 67/113 (59%), Positives = 89/113 (78%)
Query: 102 RKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTI 161
+++A +T+ +AMDCEMVG+G DG + MLARVS+VN FG C+YDK+V+P E V DYRT
Sbjct: 218 KEKAFEGLTRTVAMDCEMVGVGLDGEESMLARVSIVNLFGKCVYDKYVRPTERVTDYRTA 277
Query: 162 VSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
VSGIR +D+ NGE F VQ EVA+++RG+ LVGH++ NDL +LFL HPK+ IR
Sbjct: 278 VSGIRPDDIKNGEAFKDVQAEVAEILRGRTLVGHAVHNDLKILFLDHPKKAIR 330
>UniRef50_Q9GZR2 Cluster: RNA exonuclease 4; n=16; Tetrapoda|Rep:
RNA exonuclease 4 - Homo sapiens (Human)
Length = 422
Score = 153 bits (371), Expect = 3e-36
Identities = 71/135 (52%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Query: 81 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 139
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 140 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 199
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 200 DLNVLFLSHPKRNIR 214
DL VLFL HPK+ IR
Sbjct: 331 DLKVLFLDHPKKKIR 345
>UniRef50_Q4SXK5 Cluster: Chromosome 15 SCAF12379, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 15
SCAF12379, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 283
Score = 150 bits (364), Expect = 2e-35
Identities = 64/106 (60%), Positives = 86/106 (81%)
Query: 109 ITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKE 168
+TK +A+DCEMVG+G DG D +LARVSLVN+FG CIYDK+VKP E V D+RT VSGIR +
Sbjct: 86 LTKVVAIDCEMVGVGPDGEDSILARVSLVNQFGKCIYDKYVKPTERVTDFRTAVSGIRPQ 145
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
D+ +GE+ VQ+EVAD+++G+ +VGH++ NDL +L L HPK+ IR
Sbjct: 146 DIKSGEEVKTVQREVADILKGRTVVGHAIHNDLKILLLDHPKKKIR 191
>UniRef50_Q9VUC3 Cluster: CG6833-PA; n=2; Sophophora|Rep: CG6833-PA
- Drosophila melanogaster (Fruit fly)
Length = 290
Score = 141 bits (341), Expect = 1e-32
Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 102 RKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTI 161
R + K + +AMDCEMVG+G++ D MLARVS+VN+ G + DK+VKPR+EV DYRT
Sbjct: 107 RMKKKAHRNRILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTS 166
Query: 162 VSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
VSGIR +D+ NGEDF+ VQ EV +I G+ILVGH L+NDL VL + HP +IR T+H
Sbjct: 167 VSGIRPQDIANGEDFAAVQNEVMKLIHGRILVGHGLRNDLAVLGIRHPFHDIR---DTSH 223
Query: 222 SK 223
K
Sbjct: 224 YK 225
>UniRef50_Q7PQ12 Cluster: ENSANGP00000021838; n=2; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021838 - Anopheles gambiae
str. PEST
Length = 223
Score = 137 bits (331), Expect = 2e-31
Identities = 66/107 (61%), Positives = 81/107 (75%)
Query: 108 KITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRK 167
++T IA+DCEMVGIG DG +HMLARVS+VN+ GD I D +VKP+E V DYRT +SGIR
Sbjct: 45 EVTNRIALDCEMVGIGPDGKEHMLARVSIVNEQGDVIVDCYVKPQETVTDYRTEISGIRP 104
Query: 168 EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
E + G DF +++ V +I GKILVGH+LKNDL VL L HPK NIR
Sbjct: 105 EHVNKGVDFKTIRELVRQLIHGKILVGHALKNDLMVLNLKHPKYNIR 151
>UniRef50_A2ALB1 Cluster: XPMC2 prevents mitotic catastrophe 2
homolog; n=1; Mus musculus|Rep: XPMC2 prevents mitotic
catastrophe 2 homolog - Mus musculus (Mouse)
Length = 363
Score = 134 bits (324), Expect = 2e-30
Identities = 58/101 (57%), Positives = 82/101 (81%)
Query: 101 DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRT 160
+++QA +TK +A+DCEMVG+G G + + ARVS+VN++G C+YDK+VKP E V DYRT
Sbjct: 219 EKEQAFGGLTKALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRT 278
Query: 161 IVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDL 201
VSGIR E+L GE+F +V+KEVA++++G+ILVGH+L NDL
Sbjct: 279 AVSGIRPENLKQGEEFEVVKKEVAEMLKGRILVGHALHNDL 319
>UniRef50_Q4PER6 Cluster: RNA exonuclease 4; n=1; Ustilago
maydis|Rep: RNA exonuclease 4 - Ustilago maydis (Smut
fungus)
Length = 375
Score = 134 bits (323), Expect = 2e-30
Identities = 63/115 (54%), Positives = 86/115 (74%)
Query: 100 NDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYR 159
+D AK + ++A+DCEMVG+G G++ +LARVS+VN G IYD+FV+P+E+V DYR
Sbjct: 123 SDASSAKKEPGNYLAIDCEMVGVGDKGSESILARVSIVNFHGATIYDQFVRPQEKVTDYR 182
Query: 160 TIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
T VSG+R +DL FS VQ EVA++I+GK+LVGH+++NDL L LSHPK IR
Sbjct: 183 TWVSGVRPKDLKGAPSFSQVQGEVANLIKGKVLVGHAIQNDLKALLLSHPKVLIR 237
>UniRef50_Q08237 Cluster: RNA exonuclease 4; n=6;
Saccharomycetales|Rep: RNA exonuclease 4 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 289
Score = 131 bits (317), Expect = 1e-29
Identities = 66/143 (46%), Positives = 91/143 (63%), Gaps = 3/143 (2%)
Query: 72 DLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHML 131
+ P T EP + G +D +N K +I K+IAMDCE VG+G +G + L
Sbjct: 84 EFNPNKANTSTTIKEPVKV-GISEDTRINSNKS--KEIGKYIAMDCEFVGVGPEGKESAL 140
Query: 132 ARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKI 191
AR+S+VN FG + D+FVKPRE+V ++RT VSGI+ E + N F QK+ AD++ G+I
Sbjct: 141 ARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHMKNAITFKEAQKKTADILEGRI 200
Query: 192 LVGHSLKNDLNVLFLSHPKRNIR 214
LVGH+LK+DL L LSHPK +R
Sbjct: 201 LVGHALKHDLEALMLSHPKSLLR 223
>UniRef50_Q7F186 Cluster: Exonuclease-like protein; n=2; Oryza
sativa (japonica cultivar-group)|Rep: Exonuclease-like
protein - Oryza sativa subsp. japonica (Rice)
Length = 286
Score = 128 bits (309), Expect = 1e-28
Identities = 55/106 (51%), Positives = 82/106 (77%)
Query: 109 ITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKE 168
+TK +A+DCEMVG+G G+ L RV+LVN +G+ +YD++ +P E + DYRT +SGIR +
Sbjct: 90 LTKAVAVDCEMVGVGAGGSKSALGRVTLVNSWGNVVYDEYTRPVERIVDYRTHISGIRPK 149
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ +DF +VQK+VA++I+G+ILVGH+L +DL VL L HPK++IR
Sbjct: 150 HMNKAKDFWVVQKDVAELIKGRILVGHALHHDLKVLLLGHPKKDIR 195
>UniRef50_Q9LK97 Cluster: Exonuclease-like protein; n=4; core
eudicotyledons|Rep: Exonuclease-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 312
Score = 126 bits (305), Expect = 3e-28
Identities = 58/108 (53%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 107 NKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIR 166
+ +T +AMDCEMVG+ G L RV+LVNK+G+ +YD+FV+P E V D+RT +SGIR
Sbjct: 111 SSLTDEVAMDCEMVGVS-QGTKSALGRVTLVNKWGNVLYDEFVRPVEHVVDFRTSISGIR 169
Query: 167 KEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
DL +DF + Q +VA++I+GKILVGH+L NDL L L+HPK++IR
Sbjct: 170 PRDLRKAKDFRVAQTKVAELIKGKILVGHALHNDLKALLLTHPKKDIR 217
>UniRef50_Q0CHU1 Cluster: RNA exonuclease 4; n=5;
Eurotiomycetidae|Rep: RNA exonuclease 4 - Aspergillus
terreus (strain NIH 2624)
Length = 510
Score = 125 bits (301), Expect = 1e-27
Identities = 60/117 (51%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Query: 99 LNDRKQAKNKITKFIAMDCEMVGIGYD-GNDHMLARVSLVNKFGDCIYDKFVKPREEVKD 157
+N+ + ++ K++AMDCEMVG+G + +D LARVS+VN G+ +YD FV+P+E V D
Sbjct: 106 VNEGRSKTAELGKYVAMDCEMVGVGPNPDHDSALARVSIVNFNGEQVYDSFVRPKEMVTD 165
Query: 158 YRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+RT VSGI + VQKEVA++I G+ILVGH+L+NDL+ L LSHPKR+IR
Sbjct: 166 WRTHVSGILPRHMAEARTLEQVQKEVAEIIDGRILVGHALRNDLDALLLSHPKRDIR 222
>UniRef50_O94375 Cluster: RNA exonuclease 4; n=1;
Schizosaccharomyces pombe|Rep: RNA exonuclease 4 -
Schizosaccharomyces pombe (Fission yeast)
Length = 260
Score = 124 bits (300), Expect = 1e-27
Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 7/193 (3%)
Query: 27 NANWQKLLAS--NLLMDHKEEKQAPKEQYTGKFR-RNRKTEQKINKSKDLQPTVRKFETL 83
++NW+KL + E+K + +++Y + +N + E K ++KF
Sbjct: 3 SSNWEKLKKKLDSAKSGRVEKKHSNEKKYLKSVKGKNNENENSYIVDKKRMNELKKFAKE 62
Query: 84 NLEPDQA--DGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFG 141
N P+ D + D + RK + K+IAMDCEMVG+ D + +LARVS+VN G
Sbjct: 63 NDIPESQVLDAYGVDASKLTRKTNLETLGKYIAMDCEMVGVADDMS--VLARVSIVNYHG 120
Query: 142 DCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDL 201
+YD +V+P+E+V D+RT VSG++ + + F VQ EVA ++ ++LVGH++ NDL
Sbjct: 121 HVVYDTYVRPKEKVTDWRTWVSGVKSFHMRDAPSFEKVQAEVAKILDNRVLVGHAVHNDL 180
Query: 202 NVLFLSHPKRNIR 214
VL LSHP+R IR
Sbjct: 181 KVLLLSHPRRMIR 193
>UniRef50_Q01D40 Cluster: Xpmc2 protein; n=2; Ostreococcus|Rep:
Xpmc2 protein - Ostreococcus tauri
Length = 290
Score = 124 bits (299), Expect = 2e-27
Identities = 57/109 (52%), Positives = 79/109 (72%), Gaps = 3/109 (2%)
Query: 109 ITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKE 168
+T+ +A+DCEMVG+G DG +LARVS+VN+ G+ I D FV+P E V DYRT VSG+R
Sbjct: 89 VTRTLALDCEMVGVGEDGRRSVLARVSVVNEDGNVILDVFVQPTERVTDYRTAVSGVRPN 148
Query: 169 DL---INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
D+ F +VQ ++++++RGK+LVGHSLKND+ L L HPKR+ R
Sbjct: 149 DVKAESGARTFRVVQAQMSELLRGKVLVGHSLKNDMKALMLDHPKRDTR 197
>UniRef50_Q9HFB5 Cluster: MipD; n=1; Coprinopsis cinerea|Rep: MipD -
Coprinus cinereus (Inky cap fungus) (Hormographiella
aspergillata)
Length = 374
Score = 124 bits (299), Expect = 2e-27
Identities = 56/99 (56%), Positives = 77/99 (77%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
K++A+DCEMVG+G DG + LARVSLVN +G+ I D+FV+ RE V DYRT SGIR+ D+
Sbjct: 103 KYLALDCEMVGVGIDGEESSLARVSLVNFYGEVIMDEFVRQRERVVDYRTQWSGIRESDM 162
Query: 171 INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHP 209
++ + F VQK+VAD+++ +ILVGH++ NDL L LSHP
Sbjct: 163 VHAKLFLEVQKQVADLLKDRILVGHAVHNDLKALLLSHP 201
>UniRef50_Q9XXI3 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 269
Score = 122 bits (293), Expect = 9e-27
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 11/175 (6%)
Query: 43 KEEKQAPKEQYTGKFRR--NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHED-DIAL 99
K EK+A E F + +K +QK+N+ + Q E L + H D + +
Sbjct: 38 KAEKEANPEGSDDGFTKVQTKKQKQKMNRKRRAQ------EALAAASEVKRVHHDIPVVI 91
Query: 100 NDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYR 159
D + + ++TK IA+DCE VG G G +LAR+S+VN+ G +YDKFVKP E+V D+R
Sbjct: 92 EDSE--RGELTKVIAIDCEYVGAGMGGTTDILARISIVNELGKIVYDKFVKPTEKVTDFR 149
Query: 160 TIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
T VSGIR E++I F Q EV+ +I G+I++GH++ ND VL L+H ++ R
Sbjct: 150 TAVSGIRPENMIKAIPFDRAQTEVSKLIDGRIVIGHAVHNDFRVLKLNHIRKLTR 204
>UniRef50_Q4WHF8 Cluster: RNA exonuclease 4; n=18; Fungi/Metazoa
group|Rep: RNA exonuclease 4 - Aspergillus fumigatus
(Sartorya fumigata)
Length = 310
Score = 122 bits (293), Expect = 9e-27
Identities = 56/117 (47%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Query: 99 LNDRKQAKNKITKFIAMDCEMVGIGYD-GNDHMLARVSLVNKFGDCIYDKFVKPREEVKD 157
+N+ + +I K++AMDCEMVG+G + ND LARVS+VN G+ +YD +V+P+E + D
Sbjct: 103 VNEGRSPTAEIGKYVAMDCEMVGVGPNPDNDSALARVSIVNFNGEQVYDSYVRPKEMITD 162
Query: 158 YRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+RT VSGI + + VQK+VA+++ G+ILVGH++ NDL+ L L HPKR+IR
Sbjct: 163 WRTHVSGISPKHMAEARSLEQVQKDVAEILDGRILVGHAVSNDLDALLLGHPKRDIR 219
>UniRef50_Q4IEV5 Cluster: RNA exonuclease 4; n=5;
Pezizomycotina|Rep: RNA exonuclease 4 - Gibberella zeae
(Fusarium graminearum)
Length = 319
Score = 119 bits (286), Expect = 7e-26
Identities = 56/107 (52%), Positives = 79/107 (73%)
Query: 108 KITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRK 167
+I K+IA+DCEMVG+G G++ LARVS+V+ G IYD +VKP+E+V ++RT VSGI +
Sbjct: 129 EIGKYIAIDCEMVGVGPGGHESALARVSIVDFHGVQIYDSYVKPKEKVTNWRTAVSGISQ 188
Query: 168 EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ + DF VQ E+ ++RG+ILVGH LK+DL L LSHP ++IR
Sbjct: 189 KSMRFARDFEEVQAEIDKLLRGRILVGHDLKHDLEALILSHPGKDIR 235
>UniRef50_A5DHJ7 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 310
Score = 118 bits (284), Expect = 1e-25
Identities = 52/109 (47%), Positives = 77/109 (70%)
Query: 106 KNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGI 165
K I K++A+DCE VG+G +G + LARVS VN +G IYD+FV+PRE+V D+RT VSG+
Sbjct: 136 KKDIGKYVALDCEFVGVGPEGTESALARVSFVNFYGHVIYDRFVRPREKVTDWRTWVSGV 195
Query: 166 RKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ + + F QKE + ++ +IL+GH++ +DL+ LFLSHP+ IR
Sbjct: 196 TAQHMTDAISFDEAQKEASKILETRILIGHAVHHDLDSLFLSHPRFQIR 244
>UniRef50_Q5KJQ4 Cluster: RNA exonuclease 4; n=2; Filobasidiella
neoformans|Rep: RNA exonuclease 4 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 408
Score = 117 bits (281), Expect = 3e-25
Identities = 51/99 (51%), Positives = 74/99 (74%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
+++A+DCEMVG+G +G ++ LARVS+VN G I D FV+PRE V DYRT +SG+++ DL
Sbjct: 131 QYLAIDCEMVGVGPNGMENTLARVSIVNYHGAVILDTFVQPREPVTDYRTWISGVKQSDL 190
Query: 171 INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHP 209
+ F V K+VA+++ KIL+GH++ NDL VL L+HP
Sbjct: 191 LGAPQFDEVNKQVANLLHDKILIGHAIDNDLKVLMLTHP 229
>UniRef50_Q4V7K3 Cluster: MGC115620 protein; n=5; Tetrapoda|Rep:
MGC115620 protein - Xenopus laevis (African clawed frog)
Length = 369
Score = 116 bits (280), Expect = 4e-25
Identities = 52/104 (50%), Positives = 71/104 (68%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
K +A+DCEMVG G +G + LAR S+VN FGD +YDK++KP+ V DYRT SGIR+E L
Sbjct: 194 KAVAIDCEMVGTGPNGRNSDLARCSIVNWFGDVMYDKYIKPKSPVTDYRTRWSGIRREHL 253
Query: 171 INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+N F + QKE+ ++ GK++VGH++ ND L HPK R
Sbjct: 254 VNAIPFVVAQKEILKILNGKVVVGHAIHNDYKALNYFHPKEMTR 297
>UniRef50_A5E1X8 Cluster: RNA exonuclease 4; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: RNA exonuclease 4 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 279
Score = 116 bits (279), Expect = 5e-25
Identities = 55/129 (42%), Positives = 85/129 (65%)
Query: 96 DIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEV 155
++ +N + + K++AMDCE VGIG DG + LARVS+VN FG I D++V+P+ V
Sbjct: 97 EVIVNSPDDKRLEPGKYLAMDCEFVGIGKDGEHNALARVSIVNFFGHVIMDEYVRPKARV 156
Query: 156 KDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRT 215
D+RT +SG+ L + F VQK+V+ +I+ +ILVGH++ NDL L LSHP+R +R
Sbjct: 157 TDFRTSISGVAPWHLKDATPFDDVQKKVSALIKDRILVGHAIANDLECLQLSHPRRMLRD 216
Query: 216 HLSTNHSKR 224
+S + ++
Sbjct: 217 TVSCSEYRK 225
>UniRef50_A3GHY4 Cluster: 3'-5' exonuclease; n=1; Pichia
stipitis|Rep: 3'-5' exonuclease - Pichia stipitis
(Yeast)
Length = 271
Score = 116 bits (279), Expect = 5e-25
Identities = 56/115 (48%), Positives = 79/115 (68%), Gaps = 2/115 (1%)
Query: 100 NDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYR 159
ND + K + K+++MDCE VG+G +G + LARVS+VN +G I D+FVKPRE+V D+R
Sbjct: 94 NDHR--KKEPGKYLSMDCEFVGVGPEGTESALARVSIVNFYGHTILDEFVKPREKVTDWR 151
Query: 160 TIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
T VSG+ + + F QK AD+++ +ILVGH++ +DL LFLSHPK IR
Sbjct: 152 TWVSGVSPKHMNVAITFEEAQKRTADLLKNRILVGHAIHHDLEALFLSHPKSLIR 206
>UniRef50_Q17KA7 Cluster: Exonuclease; n=1; Aedes aegypti|Rep:
Exonuclease - Aedes aegypti (Yellowfever mosquito)
Length = 227
Score = 116 bits (278), Expect = 6e-25
Identities = 54/107 (50%), Positives = 78/107 (72%)
Query: 108 KITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRK 167
++T + +DCE VG G G +HMLARVS+VN+ + + D +VKP++ V DYRT +SGIR
Sbjct: 52 ELTDCLGLDCEFVGTGKGGKEHMLARVSIVNERLEVVLDSYVKPQKAVIDYRTEISGIRP 111
Query: 168 EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
E + +G+DFS V++ V +I G+ILVGH+LKND+ VL L HP+ +R
Sbjct: 112 ELMDSGQDFSSVRETVKLMIHGRILVGHALKNDMLVLNLRHPRHMVR 158
>UniRef50_Q5A3Q0 Cluster: RNA exonuclease 4; n=2;
Saccharomycetales|Rep: RNA exonuclease 4 - Candida
albicans (Yeast)
Length = 285
Score = 115 bits (277), Expect = 8e-25
Identities = 51/104 (49%), Positives = 74/104 (71%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
K++A+DCE VGIG DG + LAR+S++N +G + D +V+P+E V D+RT VSGI+ +
Sbjct: 115 KYVAIDCEFVGIGKDGEESALARISIINYYGVVLLDTYVRPQERVTDWRTWVSGIQSYHM 174
Query: 171 INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ DF Q + ++I KILVGH++ NDL++LFLSHPK IR
Sbjct: 175 QDAIDFKTAQLKTMELINNKILVGHAVNNDLDILFLSHPKSMIR 218
>UniRef50_Q6CE69 Cluster: RNA exonuclease 4; n=1; Yarrowia
lipolytica|Rep: RNA exonuclease 4 - Yarrowia lipolytica
(Candida lipolytica)
Length = 291
Score = 109 bits (261), Expect = 7e-23
Identities = 52/104 (50%), Positives = 72/104 (69%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
KFIA+DCE VG+G +G +LARVS+VN +G + D++VKP E V D+RT VSG+ +
Sbjct: 132 KFIALDCEFVGVGPNGARSILARVSIVNYYGHVLMDEYVKPIERVTDWRTWVSGVTPAMV 191
Query: 171 INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
NG FS Q+ V ++ G+ L+GH+L NDL VL L HP+ +IR
Sbjct: 192 ANGISFSEAQERVKRLLNGRTLIGHALINDLAVLGLDHPRADIR 235
>UniRef50_Q7S9B7 Cluster: RNA exonuclease 4; n=1; Neurospora
crassa|Rep: RNA exonuclease 4 - Neurospora crassa
Length = 406
Score = 109 bits (261), Expect = 7e-23
Identities = 54/119 (45%), Positives = 76/119 (63%)
Query: 96 DIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEV 155
D+AL + N + K++++DCEMVG G G +LAR S+V+ G IYD +V+P V
Sbjct: 200 DLALILQATKSNTLGKYLSIDCEMVGTGPSGATSVLARCSIVDFHGHQIYDSYVRPTAFV 259
Query: 156 KDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
D+RT VSGI K + + F VQ VA +++G+ILVGH +K+DL VL HP R+IR
Sbjct: 260 TDWRTHVSGISKRHMASARSFESVQATVAALLKGRILVGHDVKHDLEVLGFEHPHRDIR 318
>UniRef50_A2CF13 Cluster: Novel protein; n=2; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 321
Score = 107 bits (256), Expect = 3e-22
Identities = 49/99 (49%), Positives = 66/99 (66%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
K++A+DCEMVG G G LAR S+V+ GD +YDK+VKP V DYRT SGIR++DL
Sbjct: 135 KYLALDCEMVGTGPKGAQSELARCSIVSYDGDVVYDKYVKPINPVTDYRTRWSGIRRQDL 194
Query: 171 INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHP 209
++ F QKE+ +I GK++VGH++ ND L HP
Sbjct: 195 LHATPFYHAQKEIVKIITGKVVVGHAIHNDFKALKYFHP 233
>UniRef50_UPI0000E474E4 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 225
Score = 103 bits (248), Expect = 3e-21
Identities = 46/112 (41%), Positives = 73/112 (65%)
Query: 103 KQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIV 162
K N+ + +A+DCEMVG+G G LAR S+++ G+ IYD +VKP E + DYRT
Sbjct: 25 KDRGNRHREVVAIDCEMVGLGPKGRFTALARCSIIHHSGEIIYDSYVKPDEPITDYRTKW 84
Query: 163 SGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
SGIR +++N F+ Q++V ++++ KI++GH++ ND L SHP ++R
Sbjct: 85 SGIRPRNMVNAIPFNEAQEQVKNLLKDKIVIGHAVWNDFQALKFSHPPNDVR 136
>UniRef50_Q9H9L3 Cluster: Interferon-stimulated 20 kDa
exonuclease-like 2; n=14; Eutheria|Rep:
Interferon-stimulated 20 kDa exonuclease-like 2 - Homo
sapiens (Human)
Length = 353
Score = 101 bits (242), Expect = 1e-20
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 5 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 59
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 60 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 118
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 119 MVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI 178
MVG G G+ LAR S+VN GD +YD+++ P + DYRT SGIRK+ ++N F I
Sbjct: 186 MVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKI 245
Query: 179 VQKEVADVIRGKILVGHSLKNDLNVLFLSHPK 210
+ ++ ++ GKI+VGH++ ND L HPK
Sbjct: 246 ARGQILKILTGKIVVGHAIHNDFKALQYFHPK 277
>UniRef50_UPI00004C0BB8 Cluster: PREDICTED: similar to interferon
stimulated exonuclease gene 20-like 2; n=4;
Eutheria|Rep: PREDICTED: similar to interferon
stimulated exonuclease gene 20-like 2 - Canis familiaris
Length = 348
Score = 101 bits (241), Expect = 2e-20
Identities = 44/100 (44%), Positives = 65/100 (65%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
K +A+DCEMVG G G+ LAR S+VN GD +YD+++ P + DYRT SGIRK+ +
Sbjct: 173 KMVAIDCEMVGTGPKGHVSSLARCSIVNYHGDVLYDEYILPPCHIVDYRTRWSGIRKQHM 232
Query: 171 INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPK 210
+N F + + ++ ++ GKI+VGH++ ND L HPK
Sbjct: 233 VNATPFKVARGQILKILTGKIVVGHAIHNDFKALQYFHPK 272
>UniRef50_UPI00005488F8 Cluster: PREDICTED: similar to LOC494737
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
LOC494737 protein - Danio rerio
Length = 338
Score = 100 bits (239), Expect = 3e-20
Identities = 46/105 (43%), Positives = 68/105 (64%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
++ +AMDCEMVG G G +AR S+V+ +G+ +YD ++ P++ V DYRT SGIR
Sbjct: 133 SRIVAMDCEMVGTGPGGRRSEVARCSIVDYYGNVVYDSYILPQDPVTDYRTRWSGIRSHH 192
Query: 170 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
L F Q E+ +++GKI+VGH+L +DLNVL++S IR
Sbjct: 193 LRQAVPFEHAQNEILKILKGKIIVGHALYHDLNVLYISVQPHMIR 237
>UniRef50_Q54U94 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 298
Score = 99 bits (238), Expect = 4e-20
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 9/201 (4%)
Query: 17 NQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPT 76
++TV + IN+NW + + + Q KE T K+ + K +P
Sbjct: 32 SKTVENKQSINSNWN--VTKEKIKNKNNAYQKKKEAKLKLKSATPYTSTKVIEEK--KPH 87
Query: 77 VRKFETLNLEPDQADGHEDDIALNDRKQAKN--KITKFIAMDCEMVGIGYDGNDHMLARV 134
++ F L E + +D++ +K+ N + +KF ++DC+++ I +GN L +V
Sbjct: 88 IKDFNQLCQEHNIISPIDDNLVSPTQKEIDNLNESSKFFSIDCKIIEI--EGNKGTLGKV 145
Query: 135 SLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN-GEDFSIVQKEVADVIRGKILV 193
+ N+ G IY+K VKP +++ D+RT +G+ ++ + G DF VQKEV ++R KILV
Sbjct: 146 CIANQNGQIIYEKIVKPMDKIVDFRTKFTGLTRDKVQREGTDFLQVQKEVEKILRHKILV 205
Query: 194 GHSLKNDLNVLFLSHPKRNIR 214
GH L +DL L L+H K+ +R
Sbjct: 206 GHDLVHDLKNLKLAHKKKLLR 226
>UniRef50_Q9BSA5 Cluster: Interferon stimulated exonuclease gene 20
kDa-like protein 1; n=36; Euteleostomi|Rep: Interferon
stimulated exonuclease gene 20 kDa-like protein 1 - Homo
sapiens (Human)
Length = 327
Score = 99 bits (238), Expect = 4e-20
Identities = 44/105 (41%), Positives = 66/105 (62%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
+K +A+DCEMVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQH 167
Query: 170 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ F + QKE+ +++GK++VGH+L ND L HP+ R
Sbjct: 168 MRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTR 212
>UniRef50_Q4S474 Cluster: Chromosome undetermined SCAF14743, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF14743, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 303
Score = 99.5 bits (237), Expect = 6e-20
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
+K++A+DCEMVG G G+ L R S+V+ GD +YDKF+KP V +YRT SGIR +
Sbjct: 132 SKYLALDCEMVGSGPKGSVSQLGRCSVVSYDGDVVYDKFIKPPVPVTNYRTRWSGIRPRN 191
Query: 170 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHP 209
L N ++ +KE+ ++ GK+++GH++ ND VL HP
Sbjct: 192 LANATPYAAARKEILRLLAGKVVIGHAVHNDFKVLSYCHP 231
>UniRef50_UPI000155C35F Cluster: PREDICTED: similar to HEM45; n=2;
Mammalia|Rep: PREDICTED: similar to HEM45 -
Ornithorhynchus anatinus
Length = 281
Score = 97.5 bits (232), Expect = 2e-19
Identities = 42/96 (43%), Positives = 67/96 (69%)
Query: 109 ITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKE 168
I++ +++DCEMVG+G G++ LAR SLV G+ +YD+FV+P + DYRT VSG+ KE
Sbjct: 106 ISQVVSLDCEMVGLGPGGHESGLARCSLVGYHGNVLYDRFVRPEGTITDYRTRVSGVCKE 165
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
D+ N F+ ++E+ ++ GK++VGH L++D L
Sbjct: 166 DMKNATPFAEAREEILRLLEGKLVVGHDLQHDFEAL 201
>UniRef50_Q0TVG4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 356
Score = 97.5 bits (232), Expect = 2e-19
Identities = 55/109 (50%), Positives = 74/109 (67%), Gaps = 5/109 (4%)
Query: 111 KFIAMDCEMVGIGYDGN-DHMLARVSLVNKFGDCIYDKFVK-PRE-EVKDYRTIVSGIRK 167
K++A+DCEMVGIG + N D LARVSLVN G +YD +V+ PR+ EV DYRT VSGI
Sbjct: 149 KYVAVDCEMVGIGPEPNRDSALARVSLVNFHGHQVYDSYVQIPRKIEVTDYRTAVSGIEP 208
Query: 168 EDLIN--GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
L F V++++ ++ G+ILVGH++KNDL+VL L H + IR
Sbjct: 209 RHLRPDVARPFDEVREDLKTLLTGRILVGHAVKNDLDVLILKHEPKFIR 257
>UniRef50_Q63ZS9 Cluster: LOC494737 protein; n=2; Xenopus|Rep:
LOC494737 protein - Xenopus laevis (African clawed frog)
Length = 264
Score = 97.1 bits (231), Expect = 3e-19
Identities = 46/104 (44%), Positives = 63/104 (60%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
K +A+DCEMVG G G +AR S+VN GD +YDK++ P +K+YRT SGI K++L
Sbjct: 58 KCVAIDCEMVGTGPGGRIGEVARCSIVNYRGDVVYDKYINPELPIKNYRTRWSGITKQNL 117
Query: 171 INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
N F QKE+ +++ K +VGH+L ND L HP R
Sbjct: 118 KNAIPFKTAQKEILKILKDKRVVGHALHNDFKALKYFHPSSQTR 161
>UniRef50_Q96AZ6 Cluster: Interferon-stimulated gene 20 kDa protein;
n=9; Eutheria|Rep: Interferon-stimulated gene 20 kDa
protein - Homo sapiens (Human)
Length = 181
Score = 94.3 bits (224), Expect = 2e-18
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 173 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
F++ + E+ +++GK++VGH LK+D L
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQAL 98
>UniRef50_Q01E67 Cluster: Exonuclease-like protein; n=2;
Ostreococcus|Rep: Exonuclease-like protein -
Ostreococcus tauri
Length = 428
Score = 93.1 bits (221), Expect = 5e-18
Identities = 43/107 (40%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Query: 109 ITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKE 168
IT +A+DCEMVG+G G + +LA+V ++N+ G+ +Y + + V DYRT VSGI +
Sbjct: 246 ITDVLALDCEMVGVGDGGLESILAQVCVLNEHGNTVYTSYSRAYRAVTDYRTQVSGISQR 305
Query: 169 DL-INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ + +F V+ VA++I+G+++VGH+L+ND L L HP+ ++R
Sbjct: 306 HVDESAPEFHKVRCTVAELIKGRVVVGHALENDFKALQLHHPREDVR 352
>UniRef50_Q5MAV6 Cluster: Nucleolar mitotic checkpoint protein; n=1;
Toxoplasma gondii|Rep: Nucleolar mitotic checkpoint
protein - Toxoplasma gondii
Length = 361
Score = 92.3 bits (219), Expect = 9e-18
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+++DCEMVG G DGN LA+VS+ ++ G+ + D+FV P + D+R V+G+ L +
Sbjct: 59 VSLDCEMVGCGPDGNISALAQVSICDEKGEVLLDEFVMPDMRITDFRHHVTGLSWSILRD 118
Query: 173 -GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
G F+ + V D+IRGK+LVGH+L++DL VL L HP IR
Sbjct: 119 RGISFNAARTLVTDIIRGKVLVGHALQHDLQVLALDHPVHMIR 161
>UniRef50_Q9JL16 Cluster: Interferon-stimulated gene 20 kDa protein;
n=3; Eutheria|Rep: Interferon-stimulated gene 20 kDa
protein - Mus musculus (Mouse)
Length = 300
Score = 90.6 bits (215), Expect = 3e-17
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 109 ITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKE 168
I + +AMDCEMVG+G LAR S+VN G +YDK+++P E+ DYRT VSG+ +
Sbjct: 4 IPEVVAMDCEMVGLGPQRVSG-LARCSIVNIHGAVLYDKYIRPEGEITDYRTQVSGVTPQ 62
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
++ F + E+ +++GK++VGH LK+D N L
Sbjct: 63 HMVRATPFGEARLEILQLLKGKLVVGHDLKHDFNAL 98
>UniRef50_A7SJI5 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 167
Score = 85.0 bits (201), Expect = 1e-15
Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+A+DCEMVG+G + LAR S+VN G IYD +VKP E + D+RT SGIR +
Sbjct: 6 VALDCEMVGVGEEMKS-ALARCSIVNYDGKVIYDVYVKPDEPITDFRTRWSGIRPVHMDR 64
Query: 173 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+++ +++ ++LVGH+L+ DL+VL L+HP+ IR
Sbjct: 65 AISLRKARRQAKRLLKNRVLVGHALQFDLHVLKLNHPELLIR 106
>UniRef50_Q22S54 Cluster: Exonuclease family protein; n=1;
Tetrahymena thermophila SB210|Rep: Exonuclease family
protein - Tetrahymena thermophila SB210
Length = 599
Score = 83.0 bits (196), Expect = 5e-15
Identities = 48/174 (27%), Positives = 97/174 (55%), Gaps = 11/174 (6%)
Query: 45 EKQAPKEQYTG--KFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDI--ALN 100
+++AP+E + KF ++ T+ N+ + + ++ + ++ G++ ++ +L
Sbjct: 363 KQKAPQEVSSNWKKFMSSQPTQSNDNEDNSSKKQITNKKS---QSSESSGNQQNVFKSLE 419
Query: 101 DRKQAKNKITKFIAMDCEMVGIGYDGNDHM----LARVSLVNKFGDCIYDKFVKPREEVK 156
+K +T +A+DCEMV D LARVS+VN G + D +V+P++++K
Sbjct: 420 PQKDGYKGVTPIVAIDCEMVQCEASQKDGFPTQELARVSIVNYNGHVLLDTYVRPQKKIK 479
Query: 157 DYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPK 210
+Y T VSGI + N + V+ ++ ++++ KI+VGHS+++DL+ + PK
Sbjct: 480 NYLTKVSGITFTHIKNAPTYPEVKNKIFEILKDKIIVGHSVQHDLSSIKFEPPK 533
>UniRef50_Q6CX99 Cluster: Similarities with sp|P53331 Saccharomyces
cerevisiae YGR276c RNH70 ribonuclease H; n=3;
Saccharomycetaceae|Rep: Similarities with sp|P53331
Saccharomyces cerevisiae YGR276c RNH70 ribonuclease H -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 682
Score = 79.8 bits (188), Expect = 5e-14
Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 101 DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRT 160
D K + A+DCEM N H+L R S+VN GD IYDK VKP + DY T
Sbjct: 332 DTKTIDRDGPRTFAIDCEMC---MSENGHVLTRCSIVNFDGDLIYDKLVKPDVPIIDYLT 388
Query: 161 IVSGIRKEDLIN-GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHP 209
SGI +E L + VQ+++ ++I K +L+GHSL++DLNVL L HP
Sbjct: 389 KYSGITEEKLRDVTTTLKDVQEDLLNIISSKDVLIGHSLQSDLNVLKLRHP 439
>UniRef50_Q7REU4 Cluster: Unnamed protein product-related; n=5;
Plasmodium (Vinckeia)|Rep: Unnamed protein
product-related - Plasmodium yoelii yoelii
Length = 826
Score = 76.2 bits (179), Expect = 6e-13
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 28/230 (12%)
Query: 4 NSHKRKRTASDDHNQTVS--LRGLINANWQ-------KLLASNLLMDHKEEKQAPKEQYT 54
N K+K+T +D+H + + L LINA+ K L+SN +D + Q K++
Sbjct: 239 NYEKKKKTFTDEHIEIYAKILEKLINASSSITLEKTTKKLSSNSKVD-SQNNQKKKDEIK 297
Query: 55 GKFRRNRKTEQKI---------NKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQA 105
N K + N DL ET N E A HE +I + +
Sbjct: 298 QNGGDNSKVIENALLNGCNADENVETDLICDKGCDETANGETVDAQDHESEIETIPKTEP 357
Query: 106 K-NK----ITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRT 160
NK I ++DCEM G L +V++V+ + + IYD +V P ++ +Y T
Sbjct: 358 NTNKFEFDINNIFSIDCEMCETS--GGHRELTKVTIVDAYMNIIYDSYVLPDNKITNYLT 415
Query: 161 IVSGIRKEDLIN-GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
+ SGI + L N + VQ E+ +++ K IL+GHSL+NDL+ L + H
Sbjct: 416 LYSGINENTLKNVNTKLTDVQNELKNILNNKSILIGHSLENDLHALKIKH 465
>UniRef50_A2D9N2 Cluster: Exonuclease family protein; n=1;
Trichomonas vaginalis G3|Rep: Exonuclease family protein
- Trichomonas vaginalis G3
Length = 508
Score = 74.5 bits (175), Expect = 2e-12
Identities = 54/138 (39%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 79 KFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGI-GYDGNDH-MLARVSL 136
+FE ++P + L D NK+ IA+DCEM+ DG H LAR+S+
Sbjct: 163 RFEEFGIKPLTPEELSRFKCLPDHVDNANKV---IALDCEMIETTSEDGAKHDELARLSV 219
Query: 137 VNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN----GEDFSIVQKEVADVIRGKIL 192
VN+ G+ I D++ KP V D RT VSGI +E L N ED VAD + I+
Sbjct: 220 VNEKGEVIIDEYFKPIHPVSDLRTHVSGITQEHLDNAKLTSEDGVSALSAVAD--KETII 277
Query: 193 VGHSLKNDLNVLFLSHPK 210
VGH L+ND L L H K
Sbjct: 278 VGHGLENDFKALLLFHTK 295
>UniRef50_Q02524 Cluster: Nucleotide-binding protein; n=1;
Schizophyllum commune|Rep: Nucleotide-binding protein -
Schizophyllum commune (Bracket fungus)
Length = 192
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
+ +A+ VG+G G MLARV++++ G + D +V P V+DYR +GI+ E L
Sbjct: 7 RVVAISSVSVGVGPRGETDMLARVAVIDFTGAVLLDVYVAPTNPVRDYREAKTGIKPEYL 66
Query: 171 IN--GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ +D V + V V+R K++VGHS+ D VL L+HP ++ R
Sbjct: 67 YSSRAQDIRAVYQTVRQVLRNKVVVGHSMWLDFMVLGLTHPTKDTR 112
>UniRef50_A3FPM5 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 250
Score = 73.7 bits (173), Expect = 3e-12
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 105 AKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSG 164
+K + + I++DCEMVG G +G+ +L R+++V+ + D FVKP V ++RT SG
Sbjct: 2 SKKTLPRAISIDCEMVGCGENGHISVLGRIAVVDDKLKLLMDAFVKPSMRVTNFRTKWSG 61
Query: 165 IRKEDLINGEDFSIVQKEVADVIR--------GKILVGHSLKNDLNVLFLSHPKRNIR 214
+ + L GE F +QK+ ++ G + VGH + ND VL + P+ IR
Sbjct: 62 LTWDKLKYGESFESIQKKFLQIVEHYRKESTSGLVFVGHDISNDFQVLKWTPPESEIR 119
>UniRef50_A0CBQ5 Cluster: Chromosome undetermined scaffold_165,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_165,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 472
Score = 72.5 bits (170), Expect = 8e-12
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 83 LNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGD 142
+NL P + D + L+ +K KN++ F A+DCEMV N LARVS+V+
Sbjct: 169 MNLYPIDEKIYHDYVRLDGKKGQKNRMNIF-AIDCEMV---QTENRLELARVSIVDYNYR 224
Query: 143 CIYDKFVKPREEVKDYRTIVSGIRKEDLINGE-DFSIVQKEVADVI-RGKILVGHSLKND 200
+ D VKP+ + DY T SGI +E L N + QK V ++ IL+GHSL+ND
Sbjct: 225 VVLDILVKPQTIILDYNTKYSGITEEMLSNVTITLAEAQKMVKSILDEESILIGHSLEND 284
Query: 201 LNVLFLSHPK 210
LN L + H K
Sbjct: 285 LNALQMIHHK 294
>UniRef50_A3LWX8 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 645
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN- 172
A+DCE + +L R+SL+N G+ + DK+VKP EE+ DY T SGI +E L N
Sbjct: 290 ALDCEFCEAK---SGKVLTRISLINFQGEVVLDKYVKPDEEIIDYLTKYSGITEEKLANI 346
Query: 173 GEDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSHPK 210
+Q+E+ +I IL+GHSL++DLNV+ H K
Sbjct: 347 TTSLKDIQEELLSIISADDILIGHSLESDLNVMKFKHLK 385
>UniRef50_P53331 Cluster: RNA exonuclease 1 (EC 3.1.-.-) (RNase
H(70)); n=2; Saccharomyces cerevisiae|Rep: RNA
exonuclease 1 (EC 3.1.-.-) (RNase H(70)) - Saccharomyces
cerevisiae (Baker's yeast)
Length = 553
Score = 72.1 bits (169), Expect = 1e-11
Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM + G +L R+SLVN + IY++ VKP + DY T SGI +E L G
Sbjct: 227 ALDCEMC-LSEQGL--VLTRISLVNFDNEVIYEELVKPDVPIVDYLTRYSGITEEKLTVG 283
Query: 174 EDFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
++ VQK++ +I R IL+GHSL+NDL V+ L HP
Sbjct: 284 AKKTLREVQKDLLKIISRSDILIGHSLQNDLKVMKLKHP 322
>UniRef50_Q9FH89 Cluster: Emb|CAB62118.1; n=5; Arabidopsis
thaliana|Rep: Emb|CAB62118.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 782
Score = 71.7 bits (168), Expect = 1e-11
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 99 LNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDY 158
L +K K T+ +++DCEMV DG+ L RV V++ + DKFVKP + V DY
Sbjct: 132 LGKKKSKVIKSTRMLSIDCEMVTCE-DGSQ-ALVRVGAVDRDLKVVLDKFVKPDKPVIDY 189
Query: 159 RTIVSGIRKEDLINGE-DFSIVQKEVADVIR-GKILVGHSLKNDLNVLFLSHPK 210
+T ++G+ EDL + +QK++ + G ILVGH L NDL VL + H +
Sbjct: 190 KTDITGVTAEDLERATLSVADIQKKLRRFLSVGTILVGHGLHNDLQVLRIDHAR 243
>UniRef50_Q0TVD4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 747
Score = 70.9 bits (166), Expect = 2e-11
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
I++DCEM + + H+L RVSL+ G+ + D+ VKP +KDY T SGI L +
Sbjct: 382 ISVDCEMCKA--ENDQHVLTRVSLLGWDGEVVMDRLVKPDVAIKDYLTQYSGITAAMLEH 439
Query: 173 -GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHP 209
S +QKE+ ++ + ILVGHSL +DLN L L+HP
Sbjct: 440 VTTTLSDIQKELLRLVTPRTILVGHSLNSDLNALKLTHP 478
>UniRef50_Q017E2 Cluster: Exonuclease family protein; n=2;
Ostreococcus|Rep: Exonuclease family protein -
Ostreococcus tauri
Length = 404
Score = 70.5 bits (165), Expect = 3e-11
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLI 171
F+A+DCE Y L RVS+V + GD +YDK VKP E+ +Y T SGI E +
Sbjct: 241 FLALDCEFC---YTAEGLQLTRVSVVKEDGDVVYDKLVKPPTEITNYNTAHSGITAEQM- 296
Query: 172 NGEDFSI--VQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
G ++ VQ+E+ ++I + IL+GHSL+NDL+ L + H
Sbjct: 297 EGVTTTLQDVQRELLEMIPCETILIGHSLENDLHRLKIIH 336
>UniRef50_Q8SRL4 Cluster: Putative EXONUCLEASE; n=1; Encephalitozoon
cuniculi|Rep: Putative EXONUCLEASE - Encephalitozoon
cuniculi
Length = 370
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 133 RVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVI-RGKI 191
RV++V+ G+ IYDK +KP+E V DY T SG+ KE + G D IV+ EV + I +
Sbjct: 165 RVTMVDCNGEVIYDKIIKPKEPVVDYLTKYSGLTKEVVDRGIDIEIVRNEVLNFIGTNTV 224
Query: 192 LVGHSLKNDLNVLFLSHPKRNIRTHL 217
++GH ++NDL+ L L H K HL
Sbjct: 225 IIGHGIENDLSSLRLYHDKIIDTAHL 250
>UniRef50_O94443 Cluster: Ribonuclease H70; n=1; Schizosaccharomyces
pombe|Rep: Ribonuclease H70 - Schizosaccharomyces pombe
(Fission yeast)
Length = 623
Score = 70.5 bits (165), Expect = 3e-11
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
K +A+DCEMV N +ARV++V+ + IYD+FVKP V DY T SGI +E L
Sbjct: 267 KILAIDCEMVRTE---NGLEIARVTIVDMKSEVIYDEFVKPESPVTDYVTQYSGITEEKL 323
Query: 171 INGED-FSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSHPKRNIRTHLSTNHSK 223
N S VQ + + +L+GHSL +DLN L +HP I T NH++
Sbjct: 324 RNVTTVLSDVQSYLKKTVDNNTVLLGHSLNSDLNCLKFTHP-HIIDTANIYNHTR 377
>UniRef50_A5DIP3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 495
Score = 69.7 bits (163), Expect = 5e-11
Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
K +DCE G ++ +L R+ L+ + G I D+ VKP EE+ DY+T SGI +E L
Sbjct: 192 KIFGLDCEFCNAG---SEKVLTRICLIKEDGSVILDQLVKPSEEITDYKTEYSGITREML 248
Query: 171 INGEDF--SIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHLSTNHSK 223
N I +A + ILVGHSL +DL VL +SH R I T + H++
Sbjct: 249 ENVTTTLGQIQATLLATISSHDILVGHSLDSDLRVLKISH-SRIIDTSILYEHAQ 302
>UniRef50_Q6BJX1 Cluster: Similar to CA3219|IPF10003 Candida
albicans IPF10003; n=1; Debaryomyces hansenii|Rep:
Similar to CA3219|IPF10003 Candida albicans IPF10003 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 691
Score = 69.3 bits (162), Expect = 7e-11
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 85 LEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI 144
+E D+ + D +Q ++ + A+DCE + +L R+SL+N GD +
Sbjct: 289 VENDEHLNNVDSCEWVQTRQFDHEGSHTFALDCEFCQAA---SGKVLTRISLINFQGDVV 345
Query: 145 YDKFVKPREEVKDYRTIVSGIRKEDL--INGEDFSIVQKEVADVIRGKILVGHSLKNDLN 202
D VKP E + DY T SGI + L I I +K ++ V IL+GHSL++DLN
Sbjct: 346 IDLLVKPDEVITDYLTKYSGITEAKLEGITTNIKDIQEKILSIVSTDDILIGHSLESDLN 405
Query: 203 VLFLSHPKRNIRTHLSTNHSK 223
V+ + HP R I T L H +
Sbjct: 406 VMHIKHP-RIIDTALVFEHHR 425
>UniRef50_Q6CEI3 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 630
Score = 68.5 bits (160), Expect = 1e-10
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 106 KNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGI 165
K + + +DCEM + ++ R ++V+ GD IYDK VKP E + DY T SGI
Sbjct: 237 KKRGNTILGLDCEMCATA---SGPVVTRATVVDYNGDTIYDKLVKPDEPITDYLTQWSGI 293
Query: 166 RKEDLIN-GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHP 209
KE L + VQ ++ +I+ + ILVGHSL++DL VL L HP
Sbjct: 294 TKEMLDPVTTTLADVQDDLTKLIKTQDILVGHSLESDLGVLKLRHP 339
>UniRef50_Q9ZU79 Cluster: Expressed protein; n=3; Arabidopsis
thaliana|Rep: Expressed protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 344
Score = 68.1 bits (159), Expect = 2e-10
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
K +A+DCEMVG G DG A V LV+ + I+ V+P V DYR ++G+ KEDL
Sbjct: 131 KAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDL 190
Query: 171 INGEDFSIVQKEVADVIRG--------KILVGHSLKNDLNVLFLSHPKRNIR 214
+G V++ V + G +LVGH L++D++ L L +P +R
Sbjct: 191 KDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLR 242
>UniRef50_Q25AL7 Cluster: H0212B02.12 protein; n=4; Oryza
sativa|Rep: H0212B02.12 protein - Oryza sativa (Rice)
Length = 464
Score = 68.1 bits (159), Expect = 2e-10
Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 11/107 (10%)
Query: 106 KNKITKF-----IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRT 160
+ KIT F +A+DCEMV + +DG + L RV +VN + D+ V P + V DYRT
Sbjct: 132 EGKITNFMKSTMLAIDCEMV-LCHDGTE-ALVRVCVVNSNLEVKLDELVNPLKAVADYRT 189
Query: 161 IVSGIRKEDLINGEDFSI--VQKEVADVI-RGKILVGHSLKNDLNVL 204
++G+ K+DL G S+ VQK + ++ +GKIL+GHSL DL+ L
Sbjct: 190 SITGLSKKDL-KGVTCSLVDVQKSLKKLLSKGKILIGHSLSKDLHAL 235
>UniRef50_Q4X025 Cluster: Exonuclease, putative; n=8;
Eurotiomycetidae|Rep: Exonuclease, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 750
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+A+DCEM +G L R+SLV G+ + D+ VKP+ + DY T SGI KE L +
Sbjct: 364 LALDCEMCIT--EGGKSELTRISLVRWDGEVVLDELVKPQLPIIDYLTRFSGITKEKLDS 421
Query: 173 -GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHP 209
+ +Q+++ +++ + +LVGHSL +DLN L L+HP
Sbjct: 422 VTTTLADIQQKLLNILTPRTVLVGHSLNSDLNALKLTHP 460
>UniRef50_Q8T023 Cluster: LD38414p; n=7; Sophophora|Rep: LD38414p -
Drosophila melanogaster (Fruit fly)
Length = 787
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y G + +VSLV G +Y+ FV+P ++ DY T SGI + DL +G
Sbjct: 622 ALDCEM---SYTGRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSG 678
Query: 174 -EDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+ + VQ+++ +I IL+GH L+NDL L L H I T +S H
Sbjct: 679 AKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVH-NTLIDTSISFPH 727
>UniRef50_Q16RI6 Cluster: Rnase h; n=2; Culicini|Rep: Rnase h -
Aedes aegypti (Yellowfever mosquito)
Length = 254
Score = 67.3 bits (157), Expect = 3e-10
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y G L +V++V G +Y+K VKP E+ DY T SG+ + D +
Sbjct: 100 ALDCEM---SYTGRGLELTKVTVVAVDGSLVYEKLVKPDIEIVDYNTRYSGVTEADFSDP 156
Query: 174 EDFSIVQKEVADVIR----GKILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+++ +++ D+++ IL+GHS++NDL VL + H K I T ++ H
Sbjct: 157 RNYATLKQVQKDLLKFIYDDTILIGHSIENDLKVLKIIH-KTVIDTSITFPH 207
>UniRef50_Q6FTR3 Cluster: Similar to sp|P53331 Saccharomyces
cerevisiae YGR276c RNH70 ribonuclease H; n=1; Candida
glabrata|Rep: Similar to sp|P53331 Saccharomyces
cerevisiae YGR276c RNH70 ribonuclease H - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 660
Score = 66.9 bits (156), Expect = 4e-10
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 103 KQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIV 162
K+ ++ + A+DCEM ++ARVSLVN + IYD+ V P + DY T
Sbjct: 322 KEFEHDGSHIFALDCEMCKCE---TGFIVARVSLVNFENEVIYDELVIPEAPIVDYVTKY 378
Query: 163 SGIRKEDLING-EDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHP 209
SG+ KE L + VQ ++ ++I IL+GHSL NDL+VL + HP
Sbjct: 379 SGMTKEKLDGATKTVEQVQDDLLNIISANDILIGHSLSNDLSVLRIRHP 427
>UniRef50_Q014W5 Cluster: 3'-5' exonuclease; n=2; Ostreococcus|Rep:
3'-5' exonuclease - Ostreococcus tauri
Length = 579
Score = 66.5 bits (155), Expect = 5e-10
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 13/111 (11%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+A+DCE VG+G G +H ARV +V+ G + + +V P EV DYR ++G + E L
Sbjct: 317 VALDCEFVGVGETGEEHACARVCIVDSKGKVLLNTWVNPGVEVTDYRETLTGAKPEILER 376
Query: 173 GEDFSIVQKEVADVIRGK-------------ILVGHSLKNDLNVLFLSHPK 210
V+ +V +++ GK +LVGHS+++DL VL ++ K
Sbjct: 377 APPLEHVRGKVINILIGKAPTTRERHVGVRHLLVGHSVEHDLEVLNITWKK 427
>UniRef50_A6S540 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 753
Score = 66.5 bits (155), Expect = 5e-10
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 94 EDDIALNDRKQAKNKITKFI-AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPR 152
E + N+ +Q + + I AMDCEM G N+ L R+S+V G + D+ VKP
Sbjct: 313 EGSVPDNEFEQGSLTVGREIFAMDCEMCMTGK--NEFSLTRISIVGWDGSVVLDELVKPE 370
Query: 153 EEVKDYRTIVSGIRKEDLIN-GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHP 209
+ + DY T SGI +E L +QK + ++ + IL+GHSL +DL L L+HP
Sbjct: 371 KPIIDYLTQYSGITEEMLAPVTTTLQDIQKRLVELFHPRTILIGHSLDSDLKALKLTHP 429
>UniRef50_A2R5A3 Cluster: Contig An15c0120, complete genome; n=1;
Aspergillus niger|Rep: Contig An15c0120, complete genome
- Aspergillus niger
Length = 801
Score = 66.5 bits (155), Expect = 5e-10
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKE--DL 170
+A+DCEM +G L R+S+V G+ + D+ VKP+ + DY T SGI KE D
Sbjct: 278 LALDCEMCIT--EGGQSELTRISMVRWDGEVVLDELVKPQRPIIDYLTRFSGITKELLDP 335
Query: 171 INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHP 209
+ + QK ++ + ILVGHSL +D N L L+HP
Sbjct: 336 VTTTLADVQQKLLSLLTPRTILVGHSLNSDFNALKLTHP 374
>UniRef50_UPI0000E46A67 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 727
Score = 66.1 bits (154), Expect = 7e-10
Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
I +DCEMV I G + LARVSL + G +Y+ VKP V+DY T SGI K+ L
Sbjct: 412 IGIDCEMV-ITTAGTE--LARVSLTDDKGKMLYNSLVKPINPVRDYVTRYSGITKKLLEP 468
Query: 173 GED-FSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
E + QK V DV+ R ILVG L+NDL L + HP
Sbjct: 469 VETRLADAQKAVIDVLPRDAILVGQGLENDLRALKIYHP 507
>UniRef50_A2E953 Cluster: Exonuclease family protein; n=1;
Trichomonas vaginalis G3|Rep: Exonuclease family protein
- Trichomonas vaginalis G3
Length = 516
Score = 66.1 bits (154), Expect = 7e-10
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 98 ALNDRKQAKNKITK-FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVK 156
A ++ + KN T+ I++DCEMV Y +AR+S+ +K G+ + D+ KP EEV
Sbjct: 190 AYSELPEEKNPNTRDIISIDCEMV---YTKKGGEVARLSVTDKSGNVVMDQLFKPTEEVI 246
Query: 157 DYRTIVSGIRKEDLIN--GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPK 210
DY+T SG+ +E L N V+ + I+VGHSL+ND L L H K
Sbjct: 247 DYKTQFSGLTEEKLSNVTATPDEAVKYLSQVASKSTIIVGHSLENDFRALKLIHLK 302
>UniRef50_Q5AAW5 Cluster: Putative uncharacterized protein RNH70;
n=1; Candida albicans|Rep: Putative uncharacterized
protein RNH70 - Candida albicans (Yeast)
Length = 744
Score = 66.1 bits (154), Expect = 7e-10
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 50 KEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADG--------HEDDIALND 101
K + R+++ T+ I KDL T ++ +T N D + D N+
Sbjct: 271 KNEKNSLLRKSKATKITI---KDLLLTEQQLKTYNYPTTLVDSTWKATKDLYNTDSNNNE 327
Query: 102 RKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTI 161
+ ++ + ++ A+DCE G +L R+SL++ + D+ VKP+EE+ DY T
Sbjct: 328 KSDSETRKSRIYALDCEFCKAGAK---QVLTRISLLDFEAKVVMDELVKPKEEITDYVTK 384
Query: 162 VSGIRKEDL--INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSH 208
SGI +E L + I V V + IL+GHSL++DLNV+ + H
Sbjct: 385 YSGITEELLRDVTTTIEDIQNLFVNTVSQQDILIGHSLESDLNVMKIKH 433
>UniRef50_A4RNB0 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 720
Score = 65.7 bits (153), Expect = 9e-10
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Query: 95 DDIALNDRKQAKNKIT---KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKP 151
DD A+ + + IT + A+DCEM G +D L RV++++ G+ + D+ VKP
Sbjct: 293 DDGAVPEADIQQGSITAGREIFAIDCEMCRTGPTNHDLSLTRVTILSWDGEVVMDELVKP 352
Query: 152 REEVKDYRTIVSGIRKEDLIN-GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHP 209
+ DY T SGI KE L +QK + +++ + ILVGHSL +D+ L ++HP
Sbjct: 353 SLPILDYLTQFSGITKEMLEPVTTTLPDIQKRLLELLTPRSILVGHSLDSDMKALQMAHP 412
>UniRef50_Q2H620 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 697
Score = 64.1 bits (149), Expect = 3e-09
Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+A+DCEM G ++ L R+SLV+ G+ + D+ VKP + + +Y T SGI KE +I+
Sbjct: 298 LALDCEMCMTGEA--EYSLTRISLVSWDGEVVLDELVKPDKPITNYVTQFSGITKE-MID 354
Query: 173 GEDFSI--VQKEVADVIRGK-ILVGHSLKNDLNVLFLSHP 209
++ +Q + D++ + ILVGHSL +DL + L+HP
Sbjct: 355 PVTTTLKDIQTRLLDILHPRTILVGHSLDSDLKAMQLAHP 394
>UniRef50_A7ERC9 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 772
Score = 64.1 bits (149), Expect = 3e-09
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
+ AMDCEM D N+ L R+S+V+ G + D+ VKP + + DY T SGI + L
Sbjct: 326 EIFAMDCEMCMT--DKNEFSLTRISIVSWDGSVVLDELVKPEKPIIDYLTQYSGITESML 383
Query: 171 IN-GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHP 209
+QK + + + IL+GHSL +DL L L+HP
Sbjct: 384 APVTTTLQDIQKRLVKLFHSRSILIGHSLDSDLKALKLTHP 424
>UniRef50_Q9GZR2-2 Cluster: Isoform 2 of Q9GZR2 ; n=2;
Homo/Pan/Gorilla group|Rep: Isoform 2 of Q9GZR2 - Homo
sapiens (Human)
Length = 250
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 174 EDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
E+ +VQKEVA++++G+ILVGH+L NDL VLFL HPK+ IR
Sbjct: 133 EELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIR 173
>UniRef50_A5DU41 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 717
Score = 63.3 bits (147), Expect = 5e-09
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 47 QAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAK 106
+ P + K ++ E KI +DL T+ + E N D D L +
Sbjct: 272 KVPLTKQEKKLILDKLKEDKIT-IRDLLLTLEQREQFNYPLTLMD---QDWHLTTKSPNS 327
Query: 107 NKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIR 166
+K A+DCE +L R+SL++ G+ ++D+ VKP +E+ DY T SGI
Sbjct: 328 EGSSKIYALDCEFCKAN---ESQVLTRISLLDFEGNVVFDELVKPAQEITDYVTKFSGIT 384
Query: 167 KEDLIN-GEDFSIVQKEVA-DVIRGKILVGHSLKNDLNVLFLSH 208
+E L + D +Q V + ILVGHSL++DL V+ + H
Sbjct: 385 EEMLADVTTDLKDIQALFCKHVFQEDILVGHSLESDLRVMKILH 428
>UniRef50_Q9LII7 Cluster: Exonuclease-like protein; n=7;
Magnoliophyta|Rep: Exonuclease-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 353
Score = 62.9 bits (146), Expect = 6e-09
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 14/118 (11%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
+ +A+ C+MVG G DG+ + ARV + ++ + I+ +VKP V YR +GIR E+L
Sbjct: 130 RVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPENL 189
Query: 171 INGEDFSIVQKEVADVI--------------RGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ VQ+++ + + + +ILVGH L +DL+ L L +P IR
Sbjct: 190 RDAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIR 247
>UniRef50_Q569U5 Cluster: LOC733188 protein; n=2; Xenopus|Rep:
LOC733188 protein - Xenopus laevis (African clawed frog)
Length = 1143
Score = 62.5 bits (145), Expect = 8e-09
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 101 DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRT 160
++ Q + A+DCEM Y L RV+++N +YD FVKP ++ DY T
Sbjct: 971 EKSQPVDSNPGIFALDCEM---SYTTQGLELTRVTVINSELKVVYDTFVKPDNKIVDYNT 1027
Query: 161 IVSGIRKEDLIN-GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
SG+ +EDL N VQ + + K IL+GHSL++DL L + H
Sbjct: 1028 RFSGVTEEDLQNTAMTLRDVQAVLLSMFSSKTILIGHSLESDLFALKIIH 1077
>UniRef50_Q5K6U9 Cluster: Ribonuclease H, putative; n=2;
Filobasidiella neoformans|Rep: Ribonuclease H, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 655
Score = 62.5 bits (145), Expect = 8e-09
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 106 KNKITKFIAMDCEMVGIGYDGNDHMLARVSLVN-KFGDCIYDKFVKPREEVKDYRTIVSG 164
K+ I +A+DCEMV + DG++ LAR+S+++ G ++D+ V P E+ DYRT SG
Sbjct: 297 KDGIYPILAIDCEMV-VSKDGDE--LARISVIDFNSGKNVFDELVLPPGEIVDYRTQWSG 353
Query: 165 IRKEDLIN-GEDFSIVQKEVAD-----VIRGKILVGHSLKNDLNVLFLSHP 209
I E L++ S +Q + + IL+GHSL+ DLN L + HP
Sbjct: 354 ITAERLLSAAHTISSIQNLLLSGPSPLITPHTILLGHSLECDLNALRIRHP 404
>UniRef50_A7ANV7 Cluster: Exonuclease family protein; n=1; Babesia
bovis|Rep: Exonuclease family protein - Babesia bovis
Length = 480
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEMV G LAR+++V+ + ++D VKP +++DYRT SGI E L
Sbjct: 276 AIDCEMVTAG---GVTALARITIVDSLLNTVFDALVKPEGDIQDYRTPYSGITAESL--- 329
Query: 174 EDFSIVQKEVADVIR-----GKILVGHSLKNDLNVLFLSH 208
ED +I ++ + + ILVGHSL NDL ++H
Sbjct: 330 EDVTIRLSDIQECLNMLIGPDTILVGHSLDNDLKACEIAH 369
>UniRef50_UPI00004CFDA9 Cluster: exonuclease NEF-sp; n=4; Xenopus
tropicalis|Rep: exonuclease NEF-sp - Xenopus tropicalis
Length = 682
Score = 61.7 bits (143), Expect = 1e-08
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 174
+DCEM + G++ L R+SLV+ G CI D+ VKP ++DY T SGI ++ L+ +
Sbjct: 186 LDCEMC-LTDKGSE--LTRISLVDASGSCIMDELVKPDNTIRDYMTRYSGITRKLLLPVK 242
Query: 175 -DFSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSH 208
VQ+++ V+ +LVGHSL NDL L + H
Sbjct: 243 TKLKDVQQKLKSVLPPDAVLVGHSLDNDLRALQMIH 278
>UniRef50_Q4P868 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 671
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+A+DCE+ Y L R++LV++ G+ I D+ V+ R ++ DY T SGI E+
Sbjct: 450 VALDCEL---SYTTAGLTLTRLTLVDEEGEMILDELVRTRTDIVDYNTRFSGITPEEYEE 506
Query: 173 GEDFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHPK 210
F++ V+K +A + ILVGH L+NDL + L H K
Sbjct: 507 KAVFTLEQVRKTMAQFVGENTILVGHGLENDLRAIRLVHDK 547
>UniRef50_Q4SF45 Cluster: Chromosome 1 SCAF14609, whole genome shotgun
sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1342
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y L RV++++ IYD FVKP +V DY T SG+ +EDL N
Sbjct: 1183 ALDCEMC---YTKQGLELTRVTVIDSEMKVIYDTFVKPESQVVDYNTRFSGVTEEDLENT 1239
Query: 174 E-DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
VQ + + + IL+GHSL++DL L L H
Sbjct: 1240 TISLRDVQAVLLSLFSAESILIGHSLESDLLALKLIH 1276
>UniRef50_Q9VRX7 Cluster: CG8368-PA, isoform A; n=3; Coelomata|Rep:
CG8368-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 681
Score = 60.9 bits (141), Expect = 2e-08
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN-G 173
+DCEM N+ L R+S+VN+ + +Y+ V P + DY T SGI E +
Sbjct: 359 VDCEMCHTEAGCNE--LTRISIVNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVT 416
Query: 174 EDFSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+ +VQKEV++++ ILVG SL +DLN + + HP
Sbjct: 417 KRLDVVQKEVSELLPPDAILVGQSLNSDLNAMKMMHP 453
>UniRef50_A0BUQ6 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 276
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/103 (30%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 105 AKNKITKFIAMDCEMVGIGYD--GNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIV 162
++N+ +A+DCEMV + + MLAR+++VN G + D++ KPR +V++Y T +
Sbjct: 36 SQNQTGSILAIDCEMVECKNEIGASVQMLARITVVNYNGYVVLDQYYKPRFKVRNYITRI 95
Query: 163 SGIRKEDLINGEDFSIVQKEVADVI-RGKILVGHSLKNDLNVL 204
SGI + + + ++ +K+ ++ + K ++GH+LK+D + +
Sbjct: 96 SGITPQIIKDKPVYNDFEKQKLQLLFKDKTIIGHTLKSDFDAM 138
>UniRef50_O16312 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 594
Score = 60.5 bits (140), Expect = 3e-08
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 103 KQAKNKITK---FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYR 159
KQ KI+ ++DCEM D + L R+S+V++F + I D VKP + DY
Sbjct: 209 KQGYKKISASSPMFSVDCEMCET--DVANRELTRISIVDEFENTILDTLVKPEGRITDYV 266
Query: 160 TIVSGIRKEDLINGEDFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
T SGI D++ G ++ VQK + ++ ILVGHSL++DL + ++HP
Sbjct: 267 TRWSGI-TPDMMEGVTTTLGDVQKAIQSLLPPDAILVGHSLEHDLQAMKMTHP 318
>UniRef50_UPI0000F2CB48 Cluster: PREDICTED: similar to transcription
elongation factor B polypeptide 3 binding protein 1; n=2;
Amniota|Rep: PREDICTED: similar to transcription
elongation factor B polypeptide 3 binding protein 1 -
Monodelphis domestica
Length = 1259
Score = 60.1 bits (139), Expect = 4e-08
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y L R++++N +YD FVKP +V DY T SG+ +EDL N
Sbjct: 1100 ALDCEMC---YTKQGLELTRITVINSDLKVVYDTFVKPDNKVVDYNTRFSGVTEEDLQNA 1156
Query: 174 -EDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSH 208
VQ + ++ IL+GHSL++DL L L H
Sbjct: 1157 CITLRDVQAVLLNMFSSDTILIGHSLESDLFALKLIH 1193
>UniRef50_Q8IDV9 Cluster: Putative uncharacterized protein
PF13_0208; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0208 - Plasmodium
falciparum (isolate 3D7)
Length = 903
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/123 (26%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 88 DQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDK 147
D+ + +++ +++ + + ++DCEM + L ++++V+ + + IYD
Sbjct: 440 DENNSCDEENLIDETNYGEFDLDNIYSIDCEMCET--TNHQRELTKITVVDAYMNIIYDS 497
Query: 148 FVKPREEVKDYRTIVSGIRKEDLIN-GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLF 205
+V P ++ +Y T+ SGI + L N VQ+ + + K IL+GHSL+NDL+ L
Sbjct: 498 YVIPDNKITNYLTLYSGINESTLENVTTKLKDVQEHLKKFLNKKSILIGHSLENDLHALK 557
Query: 206 LSH 208
++H
Sbjct: 558 IAH 560
>UniRef50_UPI00001E338C Cluster: PREDICTED: similar to REX1, RNA
exonuclease 1 homolog (S. cerevisiae); n=4; Murinae|Rep:
PREDICTED: similar to REX1, RNA exonuclease 1 homolog
(S. cerevisiae) - Mus musculus
Length = 624
Score = 59.3 bits (137), Expect = 8e-08
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + L RV++V+ + +YD FVKP E+ DY T+ SG+ + DL++
Sbjct: 407 ALDCEM---SYTTHGLELTRVTVVDTDLNVVYDTFVKPDHEIVDYNTMFSGVTEADLVDT 463
Query: 174 E-DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
+ VQ + + + IL+GHSL++DL L H
Sbjct: 464 KVRLCDVQAVLLSMFSTETILIGHSLESDLLALKFIH 500
>UniRef50_Q5KE53 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 179
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 131 LARVSLVNKFGDCIYDKFVKPRE-EVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRG 189
LA++ +V+ +G+ + + FV+ V +Y T SGIR +DL+ + +Q ++ ++I+
Sbjct: 10 LAKIGIVDAYGNVLMESFVRHHPANVVNYVTRKSGIRPQDLVGAPTYEQIQPQIIELIKD 69
Query: 190 KILVGHSLKNDLNVLFLSHPKRNIR 214
KI++GH+L NDL V+ H +R
Sbjct: 70 KIVIGHTLFNDLAVIGHRHQYEMMR 94
>UniRef50_Q580Z1 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 789
Score = 58.8 bits (136), Expect = 1e-07
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 100 NDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVN-KFGDCIYDKFVKPREEVKDY 158
N + KN + A+DCEMV + N LARV+LV+ + + D VKP EEV DY
Sbjct: 380 NCADKTKNSLPNVFALDCEMVLV--KNNVSALARVTLVDVRASSVVVDTLVKPDEEVVDY 437
Query: 159 RTIVSGIRKEDLINGEDFSI---VQKEVADVIRGKILVGHSLKNDL 201
T SGI ++ G ++ QK V + LVGHSL+NDL
Sbjct: 438 VTRFSGI-DSGMLEGVTTTLKDCQQKLKRYVTKDAFLVGHSLENDL 482
>UniRef50_Q174Z4 Cluster: Exonuclease nef-sp; n=2; Culicidae|Rep:
Exonuclease nef-sp - Aedes aegypti (Yellowfever
mosquito)
Length = 586
Score = 58.8 bits (136), Expect = 1e-07
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 97 IALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVK 156
+ ND + + +DCEM ++ L RVS++++ G+ Y+ V+P ++
Sbjct: 236 VTTNDHYAPVSPKSPMFGLDCEMCKTSIGASE--LTRVSIIDEEGNEFYETLVRPENKIV 293
Query: 157 DYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGK-----ILVGHSLKNDLNVLFLSHP 209
DY T SGI E + +D S K+V +R K ILVG SL DLN L + HP
Sbjct: 294 DYLTQFSGITAEMM---KDVSKTLKDVQKDLRNKLPPDAILVGQSLNFDLNALKMMHP 348
>UniRef50_A2EBD2 Cluster: Exonuclease family protein; n=1;
Trichomonas vaginalis G3|Rep: Exonuclease family protein
- Trichomonas vaginalis G3
Length = 503
Score = 58.4 bits (135), Expect = 1e-07
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 12/115 (10%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
+ IA+DCEMV G++ LAR+S+ + G + D+ KP E+ DYRT SGI +E L
Sbjct: 192 EIIAIDCEMVETKL-GSE--LARLSVTDFEGKPLLDQLFKPTNEILDYRTPFSGISEETL 248
Query: 171 IN-----GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHLSTN 220
N + I+ K + R I+VGHSL+ND L L H R I T L N
Sbjct: 249 ANVTVTPDQALKILSKYAS---RKTIIVGHSLENDFRSLKLIH-HRCIDTALLYN 299
>UniRef50_Q4SMK5 Cluster: Chromosome 18 SCAF14547, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 18
SCAF14547, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 270
Score = 57.6 bits (133), Expect = 2e-07
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 92 GHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKP 151
G E+ + + A + F +DCEM + LARVSLV+ G C+ D+ VKP
Sbjct: 91 GLEEFVCTDSADHATDSSPLF-GLDCEMC---WTEKGLELARVSLVDSDGRCLLDELVKP 146
Query: 152 REEVKDYRTIVSGIRKEDLIN-GEDFSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSH 208
+ + DY T SGI L VQ ++ ++ +LVGHSL NDL L L H
Sbjct: 147 QNHILDYLTCFSGITAAMLSPVTTTLRDVQVQLRSLLPSDAVLVGHSLNNDLKALKLIH 205
>UniRef50_A7S0U8 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 126
Score = 57.6 bits (133), Expect = 2e-07
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM +G + L RVS+V + +YD FVKP + DY T SGI E +++G
Sbjct: 3 AIDCEMCTTS-EGLE--LTRVSVVEEDCTLLYDTFVKPDRPIIDYNTKYSGITAE-MLDG 58
Query: 174 EDFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSH 208
+ VQKE+ +I +G I+ GHSL+ DL L +++
Sbjct: 59 VTVKLADVQKELQAIIPQGAIVAGHSLECDLKALKMAY 96
>UniRef50_Q96IC2 Cluster: Putative RNA exonuclease NEF-sp; n=25;
Eutheria|Rep: Putative RNA exonuclease NEF-sp - Homo
sapiens (Human)
Length = 774
Score = 57.6 bits (133), Expect = 2e-07
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 174
+DCEM + G + L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPV 286
Query: 175 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+ VQ+++ ++ +LVGHSL DL L + HP
Sbjct: 287 TTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP 324
>UniRef50_Q9FNE7 Cluster: Exonuclease-like protein; n=2;
Magnoliophyta|Rep: Exonuclease-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 348
Score = 57.2 bits (132), Expect = 3e-07
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 14/118 (11%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
+ +A+ C+MVG G DG+ + ARV + ++ + ++ +VKP V +YR ++GIR E+L
Sbjct: 125 RVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENL 184
Query: 171 INGEDFSIVQKEVADVI--------------RGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ Q++V + + + +ILVGH L N L+ L L + IR
Sbjct: 185 RDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIR 242
>UniRef50_Q8N1G1 Cluster: RNA exonuclease 1 homolog; n=39; cellular
organisms|Rep: RNA exonuclease 1 homolog - Homo sapiens
(Human)
Length = 1221
Score = 57.2 bits (132), Expect = 3e-07
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y L RV++V+ +YD FVKP E+ DY T SG+ + DL
Sbjct: 1062 ALDCEM---SYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADL--- 1115
Query: 174 EDFSIVQKEVADVI-----RGKILVGHSLKNDLNVLFLSH 208
D S+ ++V V+ IL+GHSL++DL L + H
Sbjct: 1116 ADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIH 1155
>UniRef50_Q0EWR1 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 179
Score = 56.8 bits (131), Expect = 4e-07
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 109 ITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKE 168
++ + +D E G+G D + + ++N G+ + + VKP + + T + GI
Sbjct: 1 MSDILVLDTETTGLGDDAE---IIEIGIINGSGETVMNTLVKPTISIPEEATAIHGITDN 57
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHL 217
DL+N F+ V +E+ +I+GKIL+ ++ DL +L S K ++ +L
Sbjct: 58 DLLNAPVFADVVEELEGLIQGKILLIYNADYDLRLLRQSARKSKVQINL 106
>UniRef50_Q5C620 Cluster: SJCHGC08852 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08852 protein - Schistosoma
japonicum (Blood fluke)
Length = 212
Score = 56.8 bits (131), Expect = 4e-07
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 160 TIVSGIRKEDLI-NG--EDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
T SGIR DL NG F+ V KEVA++I+ KILVGHS+ DL VL LSHP+R IR
Sbjct: 1 TRFSGIRPCDLRKNGPARSFTDVHKEVAELIKNKILVGHSILKDLKVLRLSHPRRFIR 58
>UniRef50_UPI0000D5597E Cluster: PREDICTED: similar to CG8368-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG8368-PA, isoform A - Tribolium castaneum
Length = 631
Score = 56.4 bits (130), Expect = 5e-07
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 97 IALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVK 156
+ DR + +K +DCEM D L RVS+V++ + YD VKP +
Sbjct: 305 VLTKDRYEDVTPFSKMFGIDCEMCKTTI--GDLELTRVSVVDEHLNTFYDTLVKPDNRIT 362
Query: 157 DYRTIVSGIRKEDLINGEDFSIVQKEVADVIR-----GKILVGHSLKNDLNVLFLSHP 209
DY T SGI + + N + K+V D +R ILVG SL NDL+ L + HP
Sbjct: 363 DYLTRFSGITYKMMRN---ITTRLKDVQDDLRRLLPADAILVGQSLGNDLHALKMMHP 417
>UniRef50_A1L0Y1 Cluster: LOC100036702 protein; n=2; Xenopus
tropicalis|Rep: LOC100036702 protein - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 1026
Score = 56.4 bits (130), Expect = 5e-07
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN- 172
++DCEM Y L RVS+V+ +Y+ FVKP E+ DY T SG+ +++L N
Sbjct: 867 SVDCEMC---YTTCGLELTRVSVVDPSLQVVYETFVKPDNEIIDYNTRFSGVTEDNLKNV 923
Query: 173 GEDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSH 208
VQ + ++ IL+GHSL+NDL L L H
Sbjct: 924 STSILDVQAVMLNMFSADTILIGHSLENDLLALKLIH 960
>UniRef50_Q9U220 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 365
Score = 56.4 bits (130), Expect = 5e-07
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 107 NKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIR 166
++ K A+DCE+V + N +ARVSLV+ G + D F P EV + + SG+
Sbjct: 176 HRSNKVFALDCELV---HTLNGLEVARVSLVDMKGKVLLDTFALPVFEVISFNSTFSGVT 232
Query: 167 KEDLINGEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
++D+ + + ++ +I + +LVGHSL++DL L L H
Sbjct: 233 EKDMESAISLEACRLQLFQLINSETLLVGHSLESDLKALRLVH 275
>UniRef50_Q54EC1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 694
Score = 56.4 bits (130), Expect = 5e-07
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 68 NKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGN 127
N+ +D + T+N + D D + + I + K+ + +A+DCEM +G
Sbjct: 289 NQEEDNGASSPTTTTVNSDDDNNDNNNNLI-----NKLNLKVKEMLAIDCEMCRT--EGG 341
Query: 128 DHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGED-FSIVQKEVADV 186
L R+S+VN+ + ++ V P + + DY T SGI + L N + S + ++ +
Sbjct: 342 QLELTRISIVNEQKKVVLNELVLPEKPIIDYLTQYSGITADTLKNVTNRLSDIHAKLEKL 401
Query: 187 IR-GKILVGHSLKNDLNVLFLSHPK 210
+ +L+GHSL+NDL + H K
Sbjct: 402 VGVDTVLIGHSLENDLKAMKFIHRK 426
>UniRef50_Q9FTM4 Cluster: Putative uncharacterized protein
P0005A05.34; n=3; Oryza sativa|Rep: Putative
uncharacterized protein P0005A05.34 - Oryza sativa
subsp. japonica (Rice)
Length = 334
Score = 56.0 bits (129), Expect = 7e-07
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+A+ C+MVG G DG+ + ARV +V++ + D FVKP V YR +GIR E L +
Sbjct: 105 LALGCKMVGAGSDGSLDVCARVCVVDEQERVVLDTFVKPHIPVTHYRYDTTGIRPEHLRD 164
Query: 173 GEDFSIVQKEVADVI--------------RGKILVGHSLKNDLNVLFLSHPK 210
+ V +++ R +ILVGH L +DL L + +P+
Sbjct: 165 AMTPKQAARRVQELLLNGEPAWKARSSRGRARILVGHGLDHDLESLGMDYPE 216
>UniRef50_UPI00003C0619 Cluster: PREDICTED: similar to CG14801-PB,
isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG14801-PB, isoform B - Apis mellifera
Length = 709
Score = 55.6 bits (128), Expect = 9e-07
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 174
+DCEM + L +V++V+ G +YD V+P E+ DY T SGI DL N
Sbjct: 552 IDCEMC---FTRRGLELVKVTVVDMDGRVVYDTLVRPDVEIIDYNTRFSGISAHDLENVT 608
Query: 175 DFSI-VQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
I VQ+++ I + IL+GH ++NDL L L H
Sbjct: 609 KRLIDVQQDLLSFIFAETILIGHGMENDLRALKLLH 644
>UniRef50_Q9SN09 Cluster: Putative uncharacterized protein F3A4.170;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F3A4.170 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 322
Score = 55.6 bits (128), Expect = 9e-07
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
+ +A+DCEMV + DG + ++ RV V++ I D+FVKP + V DYRT ++G+ ED
Sbjct: 74 QMLALDCEMV-LCEDGTEGVV-RVGAVDRNLKVILDEFVKPHKPVVDYRTAITGVTAED- 130
Query: 171 INGEDFSIV--QKEVADVI-RGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ S+V Q+++ + G IL+ H + D +++F R +R
Sbjct: 131 VQKATLSLVDIQEKLRPFLSAGAILIDHPIVIDTSLVFKYPNSRKLR 177
>UniRef50_UPI0000519A04 Cluster: PREDICTED: similar to CG8368-PA,
isoform A; n=2; Apocrita|Rep: PREDICTED: similar to
CG8368-PA, isoform A - Apis mellifera
Length = 687
Score = 55.2 bits (127), Expect = 1e-06
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 85 LEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI 144
L+ + A +E+ I D N + +DCEM + L R+SLV++ I
Sbjct: 320 LKGELAKKYENYIMTKDVYVEVNAKSPMFGLDCEMCKT--TTGELELTRISLVDESMKII 377
Query: 145 YDKFVKPREEVKDYRTIVSGIRKEDLING--EDFSIVQKEVADVI-RGKILVGHSLKNDL 201
Y+ VKP + DY T SGI K ++++G S VQ+ + ++ ILVG SL +DL
Sbjct: 378 YNTLVKPDNPITDYLTRFSGITK-NMLDGVTTTLSDVQQTLRKLLPTDAILVGQSLNSDL 436
Query: 202 NVLFLSHP 209
+ L + HP
Sbjct: 437 HTLKMMHP 444
>UniRef50_Q5BXI2 Cluster: SJCHGC01934 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01934 protein - Schistosoma
japonicum (Blood fluke)
Length = 247
Score = 54.4 bits (125), Expect = 2e-06
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 106 KNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGI 165
+N A+DCEMV Y LAR+++VN I D+FV P V D + SG+
Sbjct: 92 ENSDCNVYALDCEMV---YTTGGCELARITIVNSKYQPILDEFVCPDNPVIDCNSRFSGL 148
Query: 166 RKEDLINGE-DFSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSHPK 210
+ ED+ + + +Q ++ ++ ILVGHSL++DL L L H K
Sbjct: 149 KLEDIEQAKYHITDIQAKLLNLFDSDTILVGHSLESDLIALKLIHKK 195
>UniRef50_Q9P7H2 Cluster: RNA exonuclease 3; n=1;
Schizosaccharomyces pombe|Rep: RNA exonuclease 3 -
Schizosaccharomyces pombe (Fission yeast)
Length = 540
Score = 54.4 bits (125), Expect = 2e-06
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRK----ED 169
A+DCE+ Y N LAR+++V K I D F+KP+ ++ T SGI E
Sbjct: 384 ALDCELC---YTTNGMELARLTVVAK-ESIIMDVFIKPKGKILSLNTRFSGIHDAKELES 439
Query: 170 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHLSTNHSK 223
I + I KE+ + + IL+GH L+NDLN + L H KR I T L H++
Sbjct: 440 GITMDQMYIKIKELG-MNKNTILIGHGLENDLNAMRLIH-KRVIDTALLFTHAR 491
>UniRef50_Q8IX06 Cluster: Exonuclease GOR; n=21; Homo/Pan/Gorilla
group|Rep: Exonuclease GOR - Homo sapiens (Human)
Length = 318
Score = 54.4 bits (125), Expect = 2e-06
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + L RV++V+ +YD FVKP E+ DY T SG+ + D+
Sbjct: 146 ALDCEMC---YTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKT 202
Query: 174 E-DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
VQ + + IL+GHSL++DL L L H
Sbjct: 203 SITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIH 239
>UniRef50_Q5ZMH0 Cluster: Putative uncharacterized protein; n=3;
Gallus gallus|Rep: Putative uncharacterized protein -
Gallus gallus (Chicken)
Length = 773
Score = 53.6 bits (123), Expect = 4e-06
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 174
+DCEM + GN+ + RVSLV+ G C+ ++ VKP + +Y T SG+ ++ L+ +
Sbjct: 225 LDCEMC-LTARGNE--VVRVSLVDAEGQCLLNELVKPESVIVNYCTRYSGVTRKMLLPVK 281
Query: 175 D-FSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+Q + ++ +LVGHSL DL L + HP
Sbjct: 282 TRLPDIQTRLKKILPHDAVLVGHSLNADLQALQMIHP 318
>UniRef50_UPI0000F2DC48 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 712
Score = 53.2 bits (122), Expect = 5e-06
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 107 NKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIR 166
N + +DCEM + +GN+ L RVSLV+ G C+ D+ VKP ++ +Y T SGI
Sbjct: 182 NDSSPLFGLDCEMC-LTPNGNE--LTRVSLVDAEGHCVMDELVKPDNKILNYLTRFSGIT 238
Query: 167 KEDL----INGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSH 208
++ L D + K++ + +LVGHSL DL L + H
Sbjct: 239 RKILKPVTTRLRDVQVKLKKL--LPPDAVLVGHSLNADLKALQMIH 282
>UniRef50_Q013L2 Cluster: Exonuclease family protein; n=3;
Ostreococcus|Rep: Exonuclease family protein -
Ostreococcus tauri
Length = 793
Score = 53.2 bits (122), Expect = 5e-06
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
+ + +DCEM D L VS+V++ G + VKP ++ D + ++G+ ++D+
Sbjct: 195 RLLGIDCEMCETDRDAR--ALVGVSVVDESGKVLLKTLVKPPGKIVDMKKEITGLEEKDV 252
Query: 171 INGED-FSIVQKEVADVIR-GKILVGHSLKNDLNVLFLSH 208
+N + VQ+ + + + G +LVGHSL DL L + H
Sbjct: 253 LNAKKTLEDVQEAIVKLCKPGTVLVGHSLVYDLKALKIDH 292
>UniRef50_Q4QHI9 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 931
Score = 53.2 bits (122), Expect = 5e-06
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 98 ALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVK 156
A D + + +A+DCEMV + +G + LAR +L++ G + D VKP + +
Sbjct: 437 ATTDSTASTTPLVTVVALDCEMVEV--EGGESALARATLIDVLTGKVVLDLLVKPHQRIT 494
Query: 157 DYRTIVSGIRKEDLIN-GEDFSIVQKEVADVI-RGKILVGHSLKND 200
DYRT SGI L + Q + +I +VGHSL+ND
Sbjct: 495 DYRTRFSGIDAATLQPVSTTLADCQHALQRIIDTHTFVVGHSLEND 540
>UniRef50_Q17F53 Cluster: Rnase h; n=1; Aedes aegypti|Rep: Rnase h -
Aedes aegypti (Yellowfever mosquito)
Length = 979
Score = 53.2 bits (122), Expect = 5e-06
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN- 172
A+DCEM Y L RV++V+ +YD VKP +V DY T SGI ++ L N
Sbjct: 823 ALDCEMC---YTTGGLELTRVTVVDINEKTVYDALVKPTNKVIDYNTRFSGITEQMLKNT 879
Query: 173 GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
+ VQ + + + ILVGHSL++D L L H
Sbjct: 880 TTNLHNVQAVLLSMFNSETILVGHSLESDFKALKLIH 916
>UniRef50_A5K818 Cluster: Exonuclease, putative; n=1; Plasmodium
vivax|Rep: Exonuclease, putative - Plasmodium vivax
Length = 881
Score = 52.8 bits (121), Expect = 7e-06
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN- 172
++DCEM + L ++++V+ + + +YD +V P ++ +Y T SGI + L +
Sbjct: 443 SIDCEMCETINKKKE--LTKITVVDAYMNIVYDSYVVPDNQITNYLTPYSGISESTLRDV 500
Query: 173 GEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
VQ+ + + K IL+GHSL+NDL+ L + H
Sbjct: 501 NTKLKDVQEHLKKIFNNKSILIGHSLENDLHALRIHH 537
>UniRef50_Q0CUC0 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 417
Score = 52.8 bits (121), Expect = 7e-06
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 111 KFIAMDCEMVGI-GYDGNDHM-LARVSLVNKF-GDCIYDKFVKPREEVKDYRTIVSGIRK 167
K + +DCEMVG+ G G +H + R S V+ G+ I D +V P+ V +RT SG+
Sbjct: 211 KAVVLDCEMVGVLGASGREHSEVVRFSAVDFLSGEVIIDSYVSPQGRVTSWRTKFSGVNA 270
Query: 168 EDLINGE--DFSIVQKEVADVIRGK------ILVGHSLKNDLNVLFLSH 208
L E SI+ A + + IL+GHSL NDL VL + H
Sbjct: 271 SVLAEKERQGKSIMGWRAARNLLWQFIDAQTILIGHSLNNDLAVLGMVH 319
>UniRef50_Q10124 Cluster: Putative RNA exonuclease pqe-1; n=8;
Caenorhabditis|Rep: Putative RNA exonuclease pqe-1 -
Caenorhabditis elegans
Length = 1647
Score = 52.8 bits (121), Expect = 7e-06
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
T+ A+DCEMV Y LAR+++V+ + + D FVKP +V D T SG+ E
Sbjct: 1476 TRVYALDCEMV---YTIAGPALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEFSGLTMEQ 1532
Query: 170 LINGEDF--SIVQKEVADVIRGKILVGHSLKNDLNVLFLSH 208
+ + D + QK V IL+GHSL++DL + + H
Sbjct: 1533 INSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVH 1573
>UniRef50_A3GHV0 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 369
Score = 52.4 bits (120), Expect = 9e-06
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 101 DRKQAKNKITKF-IAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDY 158
DR ++K + F I +DCEM GY L RV+ V+ F G + D FV+P EV D
Sbjct: 201 DRLFGESKGSLFAIGIDCEM---GYTTRGLELLRVTAVDFFSGKDVLDIFVRPYGEVVDL 257
Query: 159 RTIVSGIRKEDLINGEDFSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSH 208
T SG+ E F + ++ ++ + ILVGH L+ND+N + L H
Sbjct: 258 NTRYSGV-SEIKPEAVSFHEMLNQLGHIMDKNTILVGHGLENDMNAMRLIH 307
>UniRef50_UPI00005A2516 Cluster: PREDICTED: similar to transcription
elongation factor B polypeptide 3 binding protein 1
isoform 1; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to transcription elongation factor B polypeptide
3 binding protein 1 isoform 1 - Canis familiaris
Length = 795
Score = 52.0 bits (119), Expect = 1e-05
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A++CE+ Y L +V++V+ +YD FVKP +EV DY T +SG+ ++DL N
Sbjct: 643 AVNCEVC---YTAKGLELTQVTVVDPSLQVVYDTFVKPDDEVIDYNTRLSGVVEDDLKNT 699
Query: 174 E-DFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSH 208
+ VQ + ++ +L+GHS ++ L L L H
Sbjct: 700 KTSIRDVQAILLNLFSADTVLIGHSFEHSLYALKLIH 736
>UniRef50_Q5AL29 Cluster: RNA exonuclease 3; n=3;
Saccharomycetales|Rep: RNA exonuclease 3 - Candida
albicans (Yeast)
Length = 404
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTIVSGIRK- 167
++ + +DCEM G+ L R++ ++ F + D F+KP E+ D+ T SGI +
Sbjct: 239 SRVLGIDCEM---GFTTKGFELMRITAIDYFTSKTVLDIFIKPIGEIVDFNTRYSGIHEL 295
Query: 168 -EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSH 208
+D ++ E E+ D IL+GH L+ND+N + L H
Sbjct: 296 TDDFLSWEQSMEKLGEIMD--SETILIGHGLENDMNAMRLIH 335
>UniRef50_Q7TSF9 Cluster: RIKEN cDNA 2610020H08 gene; n=2;
Murinae|Rep: RIKEN cDNA 2610020H08 gene - Mus musculus
(Mouse)
Length = 479
Score = 50.0 bits (114), Expect = 5e-05
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 174
+DCE V + G + L R+SLV + G C+ D+ VKP ++ DY T +GI KE ++N
Sbjct: 227 LDCE-VCLTSMGKE--LTRISLVTEGGYCLIDELVKPDLKILDYLTSFTGITKE-ILNPV 282
Query: 175 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVL 204
+ VQK + +++ +LVGH L DL VL
Sbjct: 283 TTKLKDVQKLLRELLPPDAVLVGHCLDLDLRVL 315
>UniRef50_Q12090 Cluster: RNA exonuclease 3; n=4;
Saccharomycetales|Rep: RNA exonuclease 3 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 404
Score = 50.0 bits (114), Expect = 5e-05
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 109 ITKFIAMDCEMV--GIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTIVSGI 165
+ +++DCEM +GY+ + R+++V+ F G ++D ++P ++ D + SG+
Sbjct: 240 VENVLSLDCEMAFTSLGYE-----MIRLTIVDFFTGKTLFDHVIQPIGDIVDLNSDFSGV 294
Query: 166 RKEDLINGEDFSIVQKEVADVI-------RGKILVGHSLKNDLNVLFLSHPK 210
+ D N + KE DV + IL+GH L+NDLNV+ L H K
Sbjct: 295 HEIDRTNCPTY----KEALDVFLSENLINKNSILIGHGLENDLNVMRLFHNK 342
>UniRef50_UPI000023E3F6 Cluster: hypothetical protein FG03108.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG03108.1 - Gibberella zeae PH-1
Length = 327
Score = 49.6 bits (113), Expect = 6e-05
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTIVSGIRKED 169
K IA+DCEM G+ +GND +++ + +++ F G + + V+P E + ++RT + GI
Sbjct: 82 KAIALDCEMAGVR-NGNDEIIS-ICVIDFFTGQVLINSLVEPHEPILEWRTDIHGIGPAT 139
Query: 170 LI----NGE---DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHPK 210
+ G+ + ++E+ I + ILVG SL +DL VL +SH K
Sbjct: 140 IAIAASQGQVLRGWEAARQELFKHINMQTILVGQSLYHDLKVLRVSHEK 188
>UniRef50_A7PU68 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 345
Score = 49.2 bits (112), Expect = 8e-05
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVS-GIRKEDLI 171
IA+DCE VG G DG+ + ARV L+++ + I+ +V+P+ V +YR S
Sbjct: 122 IAIDCEKVGGGSDGSLDLCARVCLIDEDENIIFHTYVQPQIPVTNYRYDTSERCHATKGS 181
Query: 172 NGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
G+ + K +LVGH L++DL+ L + +P +R
Sbjct: 182 AGKSYGSFTKWRIHWATA-LLVGHDLRHDLDCLRMHYPDHLLR 223
>UniRef50_Q5KL74 Cluster: 3'-5' exonuclease, putative; n=1;
Filobasidiella neoformans|Rep: 3'-5' exonuclease,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 532
Score = 49.2 bits (112), Expect = 8e-05
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+AMDCEM+ + L RV++V++ G + D+ V+ + + D T SGI L N
Sbjct: 372 VAMDCEMI---FTTAGLSLGRVTVVDENGYTLLDELVRQKVPILDINTRFSGISPGQLDN 428
Query: 173 G-EDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
D V+ V I + I+VGH L+NDL L L H
Sbjct: 429 AIMDLDGVRAAVCMFIGPETIIVGHGLENDLRALRLLH 466
>UniRef50_Q2TXI8 Cluster: RIB40 genomic DNA, SC010; n=1; Aspergillus
oryzae|Rep: RIB40 genomic DNA, SC010 - Aspergillus
oryzae
Length = 368
Score = 49.2 bits (112), Expect = 8e-05
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 15/109 (13%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTIVSGI---RKE 168
+A+DCEMV +G N+ + +V V+ G+ + DK V P + V D+ T SG+ R E
Sbjct: 158 VAIDCEMVLVGPGQNE--VVQVCAVDVLSGEIVVDKGVVPTKPVTDWCTPWSGMTPQRLE 215
Query: 169 DL------INGEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHPK 210
D+ +NG + + EV + G ILVGH+L+ND+ L + H K
Sbjct: 216 DMKREGKTVNG--WEEARAEVLKFVDGDTILVGHALRNDVRALKMQHAK 262
>UniRef50_Q6CFE7 Cluster: RNA exonuclease 3; n=1; Yarrowia
lipolytica|Rep: RNA exonuclease 3 - Yarrowia lipolytica
(Candida lipolytica)
Length = 757
Score = 48.8 bits (111), Expect = 1e-04
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 104 QAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVS 163
QA + T +A+DCEM+ Y L RV+ ++ G D+ V+P + DY T S
Sbjct: 589 QAGSLQTSVVAVDCEML---YTSLGMELCRVTCIDYHGKKTLDRVVRPTGRILDYNTRFS 645
Query: 164 GIR--KEDLI--NGEDFSIVQKEVAD------VIRGKILVGHSLKNDLNVLFLSHPK 210
GI E +I +GE + E A + + ILVGH L+NDL + L H +
Sbjct: 646 GISDINEPIITESGEKGDSISFEEAHRLILKLINKQTILVGHGLENDLIAMRLIHDR 702
>UniRef50_Q4DG67 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 840
Score = 48.4 bits (110), Expect = 1e-04
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVN-KFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
+ AMDCEMV + N LAR++L++ + G + D VKP +V DY T SG+ E
Sbjct: 431 RVFAMDCEMVLVA--DNVSALARITLLDVRAGAVVLDTLVKPATKVVDYITRYSGV-DEA 487
Query: 170 LINGEDFSI--VQKEVADVIRGK-ILVGHSLKND 200
++ G ++ Q+E+ I + +VGHSL+ND
Sbjct: 488 MLEGVTTTLQDCQRELQRHIDTETFVVGHSLEND 521
>UniRef50_UPI0000D8B54B Cluster: UPI0000D8B54B related cluster; n=1;
Mus musculus|Rep: UPI0000D8B54B UniRef100 entry - Mus
musculus
Length = 903
Score = 47.6 bits (108), Expect = 2e-04
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 14/100 (14%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + + RV++V+ +YD FVKP EV DY T +SG+ + +L+
Sbjct: 755 ALDCEM---SYTYLE--VIRVTVVDTDLQVMYDTFVKPDNEVVDY-TRLSGVTEANLV-- 806
Query: 174 EDFSIVQKEVADVI-----RGKILVGHSLKNDLNVLFLSH 208
D SI ++V V+ IL+GHSL++DL L + H
Sbjct: 807 -DTSIKLQDVQAVLLSMFSADTILIGHSLESDLLALKVIH 845
>UniRef50_Q3D960 Cluster: DnaQ family exonuclease/DinG family
helicase, putative; n=26; Streptococcus|Rep: DnaQ family
exonuclease/DinG family helicase, putative -
Streptococcus agalactiae COH1
Length = 835
Score = 47.6 bits (108), Expect = 2e-04
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 96 DIALNDR-KQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLV-NKFGDCIYDKFVKPRE 153
DIA +R + K+ K+ +D E G G + + + V + NK D Y+ V P E
Sbjct: 6 DIACYNRLTMTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDS-YETDVNPHE 64
Query: 154 EVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+ ++ ++GI + L+ DF V + +I I V H++K D N+L
Sbjct: 65 SLDEHIVHLTGITDKQLVKAPDFGQVAHHIYQLIEDCIFVAHNVKFDANLL 115
>UniRef50_Q7RX52 Cluster: Putative uncharacterized protein
NCU05036.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU05036.1 - Neurospora crassa
Length = 420
Score = 47.6 bits (108), Expect = 2e-04
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTIVSGIRKEDLI 171
+A+DCEM G+ D ++ R+SL++ F G + D+ V+P ++ T SG+ ++DL
Sbjct: 150 VAIDCEM-GVSSDFESELI-RLSLIDYFSGQVLIDRLVRPNVPMQHMNTRYSGVTRQDLQ 207
Query: 172 NG--------EDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
N +KEV + + +++GHS++NDL+ L H
Sbjct: 208 NAIRNGTCIIGGLEEARKEVWKFVGPQTVVIGHSVRNDLSALRWIH 253
>UniRef50_Q0TU07 Cluster: Helicase, UvrD/REP/exonuclease family
protein; n=3; Clostridium perfringens|Rep: Helicase,
UvrD/REP/exonuclease family protein - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 870
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI--YDKFVKPREEVKDYRTIVSGIRKEDL 170
I D E G+ ++ + +NK G+ + ++KF+K ++ VKD V G E L
Sbjct: 505 IVFDVESTGVDVTEDEIIQIAAIKLNKNGEVVDKFEKFLKNKKPVKD-SYYVHGFSDEML 563
Query: 171 IN-GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNI 213
GED V KE + + I+VGH+++ D+N+L + N+
Sbjct: 564 QRIGEDKEKVLKEFVEYSKDSIIVGHNVQYDINILCSELERNNL 607
>UniRef50_A6SIN6 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 470
Score = 47.2 bits (107), Expect = 3e-04
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 113 IAMDCEMVGI-GYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLI 171
+ +DCEM G G G ML + + G + +FV PRE++ R+ + GI K L
Sbjct: 222 VTVDCEMAGTSGGTGEVVMLCVIDYIT--GAVLLHRFVCPREKITQMRSSIHGISKSTLD 279
Query: 172 N----GEDFSIVQKEVADVIR----GKILVGHSLKNDLNVLFLSHPK 210
N G+ S + +++ + ILVGH+L++DL+ L + HP+
Sbjct: 280 NANLQGQALSGWEGARSELWKYIDDHTILVGHALQHDLDALRIIHPR 326
>UniRef50_Q6CJB5 Cluster: RNA exonuclease 3; n=2;
Saccharomycetaceae|Rep: RNA exonuclease 3 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 478
Score = 46.8 bits (106), Expect = 4e-04
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFG-DCIYDKFVKPREEVKDYRTIVSGIRKEDLI 171
+A+DCEM + + + R+++V+ + + +YDK +KP E+ D + SGI D
Sbjct: 321 LALDCEMA---FTSKGYEMIRITIVDFWSSEVVYDKVIKPLGEIIDLNSKFSGIHHIDDT 377
Query: 172 NGEDFSIVQKEVAD--VIRGKILVGHSLKNDLNVLFLSHPK 210
+ + + + IL+GH L NDL V+ + H K
Sbjct: 378 APTIHEAEKCYICPSMINQNSILIGHGLDNDLRVMRIVHDK 418
>UniRef50_Q41GU3 Cluster: DNA polymerase III, epsilon subunit:DnaQ
exonuclease/DinG helicase; n=1; Exiguobacterium
sibiricum 255-15|Rep: DNA polymerase III, epsilon
subunit:DnaQ exonuclease/DinG helicase - Exiguobacterium
sibiricum 255-15
Length = 937
Score = 46.0 bits (104), Expect = 8e-04
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI--YDKFVKPREEVKDYRTIVSGIRKE 168
KF+ +D E G D M+ V + G FV+P++ + + + ++GI E
Sbjct: 4 KFVVVDLETTGHSIKSGDEMIEIGVAVIEDGQITERLSAFVRPQKPIPPFISQLTGITDE 63
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
D+ E F+ + V ++ G + V H+++ DL L
Sbjct: 64 DVAQAESFATIAPRVLQLLDGGVFVAHNVQFDLTFL 99
>UniRef50_A4VTT3 Cluster: Rad3-related DNA helicase; n=6;
Streptococcus|Rep: Rad3-related DNA helicase -
Streptococcus suis (strain 05ZYH33)
Length = 837
Score = 46.0 bits (104), Expect = 8e-04
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 93 HEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI--YDKFVK 150
HE + A+ + + ++ +D E G G D + V + N G+ I Y +
Sbjct: 9 HEREYAIMNSMKDTRTSNRYAVVDLEATGTGTDAKIIQIGIVLVEN--GEIIDSYATDIN 66
Query: 151 PREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
P E + D+ ++GI + L DF V + D+I I V H++K D N+L
Sbjct: 67 PYELLDDHIKNLTGITDQQLSQAPDFGQVASTIYDMIGDAIFVAHNVKFDANLL 120
>UniRef50_Q5B523 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 560
Score = 46.0 bits (104), Expect = 8e-04
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 14/120 (11%)
Query: 105 AKN-KITKFIAMDCEMVGIGYDGNDHM--LARVSLVNKF-GDCIYDKFVKPR--EEVKDY 158
AKN + + +DCEMVG+ N + + R++ V+ G+ + + FV+P + V ++
Sbjct: 360 AKNANARQAVVLDCEMVGVVGPNNSEVSEVVRLAAVDFLSGEVLVNTFVEPAADQRVINW 419
Query: 159 RTIVSGIRKEDL--INGEDFSIVQKEVA-DVI-----RGKILVGHSLKNDLNVLFLSHPK 210
RT VSG+ K L + + ++ E A D++ + IL+GHSL NDL VL + H +
Sbjct: 420 RTRVSGVNKSLLSEMKKQGQTVQGWEAARDLLWMFVDKQTILIGHSLHNDLAVLGMVHQR 479
>UniRef50_A1KUV1 Cluster: DNA polymerase III, epsilon chain; n=4;
Neisseria|Rep: DNA polymerase III, epsilon chain -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 253
Score = 44.4 bits (100), Expect = 0.002
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 99 LNDRKQAKNKITKFIAMDCEMVGIGYDGNDHML--ARVSLVNK-FGDCIYDKFVKPREEV 155
+ + K+ + I + I +D E G+ DG D ++ A + +VN+ D +V P ++
Sbjct: 1 MENLKKEADMIQRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLYVHPERDM 60
Query: 156 KDYRTIVSGIRKEDLI--NGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNI 213
+ V G+ E L N F+ V +++AD +RG L+ H+ K D+ L + + +
Sbjct: 61 PEEAARVHGLTIEVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFLNMEFRRMGL 120
Query: 214 RT 215
T
Sbjct: 121 PT 122
>UniRef50_Q26FQ2 Cluster: DNA polymerase III, epsilon subunit; n=1;
Flavobacteria bacterium BBFL7|Rep: DNA polymerase III,
epsilon subunit - Flavobacteria bacterium BBFL7
Length = 466
Score = 43.6 bits (98), Expect = 0.004
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF---VKPREEVKDYRTIVSGIRKE 168
+ +D E G GN + + +V GD I DK+ + P + DY T ++GI
Sbjct: 8 YCVVDIETTGNRMTGN--RMTEICIVRMRGDTILDKYSSLIDPEVLIPDYITTLTGIDNA 65
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+ + F+ V +E+ + + I V H++ D NVL
Sbjct: 66 MVASAPVFADVAEEILNFTKDYIFVAHNVNFDYNVL 101
>UniRef50_Q5APK0 Cluster: PAB-dependent poly(A)-specific ribonuclease
subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent
poly(A)-nuclease); n=2; Saccharomycetales|Rep:
PAB-dependent poly(A)-specific ribonuclease subunit PAN2
(EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease) -
Candida albicans (Yeast)
Length = 1190
Score = 43.6 bits (98), Expect = 0.004
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 111 KFIAMDCEMVGIGYDGNDHM-------LARVSLVNKFGDCIYDKFVKPREEVKDYRTIVS 163
+F+ + E + I YDG + LAR+S++ + G D ++ ++ DY T S
Sbjct: 993 EFVMLKPEELEIHYDGYKKLIKPKQLSLARISVLRENGIPFIDDYIVHTSDIYDYLTNFS 1052
Query: 164 GIRKED----LINGEDFSIVQKEVAD----VIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
GI D L N E+ +Q + G I VGH L ND + L P+R IR
Sbjct: 1053 GIEPNDLNLTLSNRENLVTLQTAYRKLWLLLNLGVIFVGHGLYNDFRTINLQVPERQIR 1111
>UniRef50_O29290 Cluster: DNA polymerase III, subunit epsilon; n=1;
Archaeoglobus fulgidus|Rep: DNA polymerase III, subunit
epsilon - Archaeoglobus fulgidus
Length = 205
Score = 42.3 bits (95), Expect = 0.009
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI-----YDKFVKPREEVKDYRTIVSGI 165
+F+++D E G+ D ++A + V G I Y + ++P E+ K G+
Sbjct: 9 QFLSIDLETTGLNQK-KDEIIA-IGAVPIIGTRILAGESYYRLLRP-EKFKHESMKFHGL 65
Query: 166 RKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
L DFS + +EVAD++RGK+LVG++++ D L
Sbjct: 66 DPARLKTAHDFSEIAEEVADLLRGKVLVGYAIELDYGFL 104
>UniRef50_Q81ST0 Cluster: DnaQ family exonuclease/DinG family
helicase, putative; n=10; Bacillus cereus group|Rep:
DnaQ family exonuclease/DinG family helicase, putative -
Bacillus anthracis
Length = 934
Score = 41.9 bits (94), Expect = 0.012
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 111 KFIAMDCEMVGIGY-DGNDHMLARVSLVNKFGDC--IYDKFVKPREEVKDYRTIVSGIRK 167
+++ +D E G + DG D + ++V + G+ I+ F+ P+ E+ + T ++GI +
Sbjct: 4 RYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTGIDE 63
Query: 168 EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+ F V V ++++G V H++ D N L
Sbjct: 64 SMVKQAPLFEDVAPMVVELLQGAAFVAHNVHFDWNFL 100
>UniRef50_Q55DD5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1536
Score = 41.9 bits (94), Expect = 0.012
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 110 TKFIAMDCEMVGIGYDGN-------DHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIV 162
T+F+++ E + DG + LARVS++ + G+ +D +++ E V DY T
Sbjct: 1275 TEFVSIGPEETEVSSDGKRVIIQPGNFSLARVSIIRENGEAFFDDYIQSIEPVTDYLTRF 1334
Query: 163 SGIRKEDL---INGEDF----SIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNI 213
SGI DL ++ ++ S K V +G VGH LK D ++ + P I
Sbjct: 1335 SGINPGDLDPKLSTKNVITLKSCYLKLRYLVDQGVKFVGHGLKKDFRIINIYVPPNQI 1392
>UniRef50_A2QKS9 Cluster: Remark: antibodies against GOR are present
in individuals with hepatitis C; n=1; Aspergillus
niger|Rep: Remark: antibodies against GOR are present in
individuals with hepatitis C - Aspergillus niger
Length = 379
Score = 41.9 bits (94), Expect = 0.012
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 16/123 (13%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTIVSGIRKEDL- 170
+++DCEMV G L +VS+V+ G+ + D+ V P E V D+RT SG+ E +
Sbjct: 156 VSLDCEMV-TDTTGRTQ-LCQVSMVDVLTGELLLDQPVLPSEPVSDWRTKWSGMTAELMA 213
Query: 171 --------INGEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+NG + + V + I K ILVG SL DL+VL + H +R + T+L
Sbjct: 214 QHVAAGRTVNG--YEGARARVWEYIDQKTILVGQSLNFDLDVLGIVH-ERVVDTYLLMRG 270
Query: 222 SKR 224
+R
Sbjct: 271 QRR 273
>UniRef50_Q7RBL5 Cluster: Putative uncharacterized protein PY06128;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY06128 - Plasmodium yoelii yoelii
Length = 1974
Score = 41.5 bits (93), Expect = 0.016
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Query: 32 KLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQAD 91
K LA L + K EK+ K+ Y KF K + N K Q + +K E N E ++
Sbjct: 202 KNLAYKNLYNLKNEKEK-KKSYNYKFITTDKKFENENSDK-FQKSYKKNEIKNTEIEENY 259
Query: 92 GHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIY-DKFVK 150
+ L D+ ++K +D I DG+ ++++N F ++ D +K
Sbjct: 260 EEMXEEELIDKNESKKDNDSMYCIDTNNCTIINDGSYFCEDVLNIINHFRKTVFNDHIIK 319
Query: 151 PREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIR 188
E ++ I I K D +N +++++ + I+
Sbjct: 320 QTEYYNMFKDIEKLIYKRDFLNLNIIKTIKEKIIESIK 357
>UniRef50_Q1DHQ6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 418
Score = 41.5 bits (93), Expect = 0.016
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRK----E 168
IA+DCEMV H ++ ++ G + + +KP V D+RT SGI + E
Sbjct: 194 IALDCEMVST--IAGQHPVSISAIDYLTGSVLINYLIKPSVRVLDWRTKFSGITEAMVTE 251
Query: 169 DLINGEDFSIVQKEVADVIRGK------ILVGHSLKNDLNVLFLSHPKRNIRTHLSTNHS 222
+ NG ++ E A + IL+G SL NDLN L + H R + + + T H+
Sbjct: 252 AVTNGT--ALPHWEAARALLWTYMTPQTILIGQSLSNDLNALGMVH-TRVVDSEILTRHA 308
>UniRef50_A2QW09 Cluster: Function: Rex1p of S. cerevisiae is
required for 5S rRNA and tRNA-Arg3 maturation; n=1;
Aspergillus niger|Rep: Function: Rex1p of S. cerevisiae
is required for 5S rRNA and tRNA-Arg3 maturation -
Aspergillus niger
Length = 518
Score = 41.5 bits (93), Expect = 0.016
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 103 KQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTI 161
K K + +DCEMV + ++A ++ V+ G+ + + +V P+ + ++ T
Sbjct: 300 KSGHRKARGAVVIDCEMVQA--EKGRRVIAYLAAVDFITGEVLINSYVDPQRRIFNWCTR 357
Query: 162 VSGIR----KEDLINGED---FSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHPK 210
SGI K+ + NG+ + ++ + D I +L+GH +K+DLN L + HP+
Sbjct: 358 YSGITLKAMKKAVANGDTLRGWMGARRALWDFIDSDTVLIGHDIKHDLNCLGIIHPR 414
>UniRef50_A5LFK6 Cluster: DNA polymerase III subunit epsilon; n=2;
Streptococcus pneumoniae|Rep: DNA polymerase III subunit
epsilon - Streptococcus pneumoniae SP3-BS71
Length = 307
Score = 41.1 bits (92), Expect = 0.022
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDC-IYDKF---VKPREEVKDYRTIVSGIRK 167
++A+D E + G+ + + LV KF D I D F + P EE D+ + GI
Sbjct: 5 YVALDVETAN-DFRGS---VCSIGLV-KFKDGNIVDTFYTLINPEEEFDDFNIFIHGITP 59
Query: 168 EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
ED+++ F V+K + D I I+V H + D+ L
Sbjct: 60 EDVLDSPTFPEVRKSIVDFIGLDIVVAHFAQFDMGAL 96
>UniRef50_Q9VB01 Cluster: CG12877-PA, isoform A; n=8; Diptera|Rep:
CG12877-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1010
Score = 41.1 bits (92), Expect = 0.022
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 26/117 (22%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTI------------ 161
A+DCEM Y + L RV++V+ G +YD VKP ++ DY T
Sbjct: 835 ALDCEMC---YTTHGIELTRVTVVDINGRSVYDALVKPDNQIVDYNTTWVNVAFRLFRIN 891
Query: 162 -------VSGIRKEDLINGEDFSI--VQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
SGI E +++ E +I VQ + + K +LVGHSL++DL L L H
Sbjct: 892 LQYSDFSYSGI-TEAMLSNETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIH 947
>UniRef50_A1D8W3 Cluster: RNA exonuclease, putative; n=3;
Trichocomaceae|Rep: RNA exonuclease, putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 426
Score = 40.7 bits (91), Expect = 0.028
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 15/107 (14%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTIVSGIRKEDL- 170
+A+DCEMV + +G +A++ V+ G+ I D +V P + V D+RT SG+ ++ L
Sbjct: 215 VALDCEMVEV--EGGCAEVAQICAVDILAGEVIVDIYVVPSKMVTDWRTPWSGMSQKLLE 272
Query: 171 --------INGEDFSIVQKEV-ADVIRGKILVGHSLKNDLNVLFLSH 208
+NG + +K + A + ILVG SL++DL+++ + H
Sbjct: 273 EMKEAGKTVNG--WEEARKALWAHIDPDTILVGQSLQHDLDIMRMVH 317
>UniRef50_Q4P5M2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1444
Score = 40.3 bits (90), Expect = 0.038
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 111 KFIAMDCEMVGIGYDGNDHM-------LARVSLVN----KFGDCIYDKFVKPREEVKDYR 159
+F+A++ E + I DG + LARVS+V K G D + +E+V DY
Sbjct: 1198 EFVALNQEELEIRSDGTRSVIRPTKLSLARVSVVRGQGAKEGISFIDDHIYTQEQVVDYL 1257
Query: 160 TIVSGIRKEDLI-NGEDFSIVQKEVAD------VIRGKILVGHSLKNDLNVLFLSHPKRN 212
T SGI DL + ++V + A V RG I +GH LK D ++ + PK
Sbjct: 1258 TKFSGILPGDLDPHTSKHTVVPLKSAYKKLRLLVDRGCIFIGHGLKKDFRIINIFVPKEQ 1317
Query: 213 IRTHLSTNHS 222
+ + HS
Sbjct: 1318 VIDTVDLYHS 1327
>UniRef50_Q0A6Z2 Cluster: Putative PAS/PAC sensor protein precursor;
n=1; Alkalilimnicola ehrlichei MLHE-1|Rep: Putative
PAS/PAC sensor protein precursor - Alkalilimnicola
ehrlichei (strain MLHE-1)
Length = 714
Score = 39.9 bits (89), Expect = 0.050
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 112 FIAMDCEMVGIGYDGNDHM--LARVSLVN--KFGDCIYDKFVKPREEVKDYRTIVSGIRK 167
F+ DCEM G+ +G D + +A V +VN +D+ + P + GI
Sbjct: 509 FVVFDCEMTGLNPEGGDEIISIAGVRVVNGRVLTGETFDRIINPGRPIPPGSVRFHGITD 568
Query: 168 EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+D+ + +V + + +LV H+ D+ + + + +R
Sbjct: 569 DDVQDKPPIEVVLPQFKSFVGDAVLVAHNAAFDMKFISMKEREAGVR 615
>UniRef50_A0LZ46 Cluster: Exonuclease family protein; n=10;
Flavobacteria|Rep: Exonuclease family protein - Gramella
forsetii (strain KT0803)
Length = 457
Score = 39.9 bits (89), Expect = 0.050
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF---VKPREEVKDYRTIVSGIRKE 168
+ +D E G Y N+ + +++ G + D+F V P + ++ + ++GI +
Sbjct: 2 YAILDIETTGGKY--NEEGITEIAIYKFDGQKVVDQFISLVNPEQPIQPFVVNLTGINND 59
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
L N F V K + ++ ILV H+ K D +L
Sbjct: 60 MLKNAPKFYEVAKRIVEITEDCILVAHNAKFDYRIL 95
>UniRef50_Q8L7M4 Cluster: Exonuclease-like protein; n=7;
Magnoliophyta|Rep: Exonuclease-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 39.9 bits (89), Expect = 0.050
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGI 165
+ +A+DCEM I +G + L RV+LV+ G + DK V P + DY T SGI
Sbjct: 214 EIVALDCEMC-ITKEGLE--LTRVTLVDIQGQVLLDKLVMPTNPITDYNTRYSGI 265
>UniRef50_A6RGR0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 661
Score = 39.9 bits (89), Expect = 0.050
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIY-DKFVKPREEVKDYRTIVSGIRKEDLI 171
+A+DCEM G G D L R++L++ F + D V P +++ YRT SG+ + D+
Sbjct: 365 VAIDCEM-GQAASG-DSELIRITLIDYFSSAVLIDSLVYPSVKMEHYRTRFSGVNRRDME 422
Query: 172 NGEDFS--IVQKEVAD------VIRGKILVGHSLKNDLNVLFLSH 208
+ I+ ++ A V ++VGHS NDL L H
Sbjct: 423 AAKTAGSCIMGRDNARFAVWRYVGPETVVVGHSAHNDLESLRWIH 467
>UniRef50_P47729 Cluster: DNA polymerase III polC-type; n=1;
Mycoplasma pulmonis|Rep: DNA polymerase III polC-type -
Mycoplasma pulmonis
Length = 1435
Score = 39.9 bits (89), Expect = 0.050
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI--YDKFVKPREEVKDYRTIVSGIRKE 168
+++ D E G+ N+ + S++ K G I + F+KP+ ++ + T ++GI +E
Sbjct: 403 EYVVYDIETTGLSPMLNELIQFGASVI-KNGRIIETHHFFIKPKSKLDSFTTKLTGITQE 461
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
L G + ++++ + + +I+V H+ D N L
Sbjct: 462 HLEKGYELQEALEKISSIFKARIMVAHNAAFDHNFL 497
>UniRef50_Q6KIN3 Cluster: DNA polymerase III alpha subunit; n=1;
Mycoplasma mobile|Rep: DNA polymerase III alpha subunit
- Mycoplasma mobile
Length = 1433
Score = 39.5 bits (88), Expect = 0.066
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 100 NDRKQAKNKITKFIAMDCEMVGIG--YDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKD 157
N +K K ++ D E G+ +D A+ L K D + FVKP +E+ +
Sbjct: 388 NLKKNTLIKNETYVVFDLETTGLSPIFDDIIEFGAQKILNGKVIDTL-QFFVKPNKEISE 446
Query: 158 YRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
T+++GI+ +D+ N K++ + + +V H+ D+N +
Sbjct: 447 KITLITGIKNQDVENAISEKEALKKILEFMGDHTVVAHNATFDMNFI 493
>UniRef50_A7FTJ8 Cluster: Helicase, UvrD/REP/exonuclease family
protein; n=4; Clostridium botulinum|Rep: Helicase,
UvrD/REP/exonuclease family protein - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 855
Score = 39.5 bits (88), Expect = 0.066
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI--YDKFVKPREEVKDYRTIVSGIRKEDL 170
+ D E GI ++ + +N G+ I + +F+ P++ V D +V G + L
Sbjct: 496 VVFDVESTGINTTEDEIVQIAGIKINNKGEVIESFQRFLTPKKFVGD-SYLVHGFSDQFL 554
Query: 171 I-NGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
NGE+ +V K+ + I+ ++VGH++ D+++L
Sbjct: 555 KENGENKKVVLKDFLEFIKDTVIVGHNVAFDISIL 589
>UniRef50_A6DK72 Cluster: DNA polymerase III; n=1; Lentisphaera
araneosa HTCC2155|Rep: DNA polymerase III - Lentisphaera
araneosa HTCC2155
Length = 210
Score = 39.5 bits (88), Expect = 0.066
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFG-----DCIYDKFVKPREEVKDYRTIVSGIR 166
++ +DCEM G+ D +L+ ++ G + Y + +++++D ++ +
Sbjct: 30 YVVIDCEMTGLK-PKQDKLLSIAAVKISQGRIQSQESFYRVIFQEKQKLRDETILIHRLN 88
Query: 167 KEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHLST 219
E + G D V KE +D + I VGH DL+ L P + HL T
Sbjct: 89 HEQISTGSDQIAVLKEFSDFCQNCIPVGHFFDIDLSFLNPVMPLPFLYPHLDT 141
>UniRef50_A0K225 Cluster: DNA polymerase III, epsilon subunit; n=3;
Bacteria|Rep: DNA polymerase III, epsilon subunit -
Arthrobacter sp. (strain FB24)
Length = 406
Score = 39.5 bits (88), Expect = 0.066
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI----YDKFVKPREEVKDYRTIVSGIRK 167
F +D E G+ + GN H +A +++V+ D ++ V P+ ++ + GIR
Sbjct: 5 FAVVDVETTGL-FPGN-HRIAEIAVVHVDPDGTVSNRWETLVNPQRDLGPQH--IHGIRA 60
Query: 168 EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSH 208
D+++ F + +V +++ G++LV H++ D F+SH
Sbjct: 61 ADILHAPVFGDIAHDVMELLAGRVLVAHNVHFDYR--FVSH 99
>UniRef50_Q4Q2Z3 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1882
Score = 39.5 bits (88), Expect = 0.066
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 11 TASDDHNQTVSLRGLINANWQKLLAS-----NLLMDHKEEKQAPKEQYTGKFRRNRKTEQ 65
T++ H ++R ++ W++ L+S N + EK+A K + G + N KTE+
Sbjct: 701 TSNKRHYDEATIRFVLRCFWKERLSSFSQQMNARVSAVNEKRARKRELEGTLQ-NGKTEK 759
Query: 66 KINKSKDLQPTVRKFETLNLEPDQADGHEDDIALN 100
+I+ + + P V + + D++D EDD+A+N
Sbjct: 760 RISPTGECLPPVSESSARS---DESDDDEDDVAVN 791
>UniRef50_Q23E97 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1548
Score = 39.5 bits (88), Expect = 0.066
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 7 KRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQK 66
K + A+DD+N+ + ++ + A+NL + ++K A + ++ + E
Sbjct: 696 KNQNIAADDNNE-------LEYKFEDISANNLTL---KQKNAASNNFQQTLKQEIQQENN 745
Query: 67 INKSKDLQ-PTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKI 109
+ K + LQ + + ET+N+ DQ + DDIA KQ K ++
Sbjct: 746 LKKEEQLQNKNIIQQETININNDQKNQLHDDIAKAQNKQIKRRV 789
>UniRef50_Q8DWE0 Cluster: DNA polymerase III polC-type; n=60;
Lactobacillales|Rep: DNA polymerase III polC-type -
Streptococcus mutans
Length = 1465
Score = 39.5 bits (88), Expect = 0.066
Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 97 IALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI--YDKFVKPREE 154
I N+ N+ T ++ D E G+ ND + S ++K G+ + +D+F+ P
Sbjct: 411 IVYNEVDMDMNEAT-YVVFDVETTGLSAINNDLIQIAASKMHK-GNIVEQFDEFIDPGHP 468
Query: 155 VKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNI 213
+ + T ++GI + + + S V +E + +LV H+ D+ + ++ + ++
Sbjct: 469 LSQFTTDLTGITDQHVKGAKPISQVLQEFQSFCQDTVLVAHNATFDVGFMNANYERHDL 527
>UniRef50_A4BWD8 Cluster: DNA polymerase III, epsilon subunit; n=3;
Flavobacteriales|Rep: DNA polymerase III, epsilon
subunit - Polaribacter irgensii 23-P
Length = 462
Score = 39.1 bits (87), Expect = 0.087
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF---VKPREEVKDYRTIVSGIRKE 168
+ +D E G G G + +S + G I D+F V P + + + T ++GI
Sbjct: 3 YAVVDIETTGNGPKGQK--ITEISALIFDGKKIVDEFTSLVNPEQNIPAFITSLTGITNA 60
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+ N F + K+VA++ I V H++ D N++
Sbjct: 61 MVRNAPRFFEIAKKVAEITENTIFVAHNVNFDYNII 96
>UniRef50_P54394 Cluster: Probable ATP-dependent helicase dinG
homolog; n=5; Bacillus|Rep: Probable ATP-dependent
helicase dinG homolog - Bacillus subtilis
Length = 931
Score = 39.1 bits (87), Expect = 0.087
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI--YDKFVKPREEVKDYRTIVSGIRKE 168
+F+ +D E G D ++ ++V + G + K++ P + + + ++GI +
Sbjct: 5 RFVVIDVETTGNSPKKGDKIIQIAAVVIENGQITERFSKYINPNKSIPAFIEQLTGISNQ 64
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDL 201
+ N + F V +EV ++ G V H++ DL
Sbjct: 65 MVENEQPFEAVAEEVFQLLDGAYFVAHNIHFDL 97
>UniRef50_Q23AQ6 Cluster: Cation channel family protein; n=1;
Tetrahymena thermophila SB210|Rep: Cation channel family
protein - Tetrahymena thermophila SB210
Length = 2636
Score = 38.7 bits (86), Expect = 0.11
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Query: 4 NSHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKT 63
NSH R+ + ++T L N + QK+ +SN L D Q ++ Y+ R + T
Sbjct: 2262 NSHSRRDYVLNQLSKTKQL----NMSLQKIQSSNSLRD-----QTKQQDYSSNEERQQTT 2312
Query: 64 EQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKI--TKFIA--MDCEM 119
E+K N+S K + ++P+Q G + N + Q +NKI + ++ +D
Sbjct: 2313 EKKSNQSI----VSSKHLNMQIQPNQGSGQLLETQQNIQNQTQNKIQNSNYLIQNLDENK 2368
Query: 120 VGIGYDGNDHMLARVSLVNKF 140
+GI ++ + S+VN +
Sbjct: 2369 LGIFKQNENNFENKQSVVNNY 2389
>UniRef50_Q2GQF2 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 443
Score = 38.7 bits (86), Expect = 0.11
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTIVSGIRKEDL- 170
+A+DCEM G +DG D L R+++V+ F G + D V P + + T SG+ K D+
Sbjct: 178 VAIDCEM-GTAFDG-DSELIRLTVVDYFTGKALIDSLVYPDVPMMHFNTRWSGVTKGDME 235
Query: 171 -INGEDFSIVQKEVA--DVIR----GKILVGHSLKNDL 201
E I+ K A + R I++GH ++DL
Sbjct: 236 RARREHKCILGKAAARKAIFRYVGPSTIVIGHGAQSDL 273
>UniRef50_A7EAD7 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 916
Score = 38.7 bits (86), Expect = 0.11
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 129 HMLARVSLVNKFGDC----IYDKFVKPREEVKDYRTIVSGIRKEDLI------NGEDFSI 178
H LARVS+V FG+ D ++ ++ + DY T SGI DL N
Sbjct: 652 HALARVSVVRGFGEDEGFPFIDDYINCKDPIVDYLTSYSGISPGDLDPRQSRHNLVSLKT 711
Query: 179 VQKEVADVIR-GKILVGHSLKNDLNVLFLSHPKRNI 213
K++ ++ G VGH LK D V+ + PK ++
Sbjct: 712 AYKKLWILLNLGCKFVGHGLKTDFRVINIQIPKSHV 747
>UniRef50_UPI00006AA922 Cluster: hypothetical protein CHGG_08952;
n=1; Chaetomium globosum CBS 148.51|Rep: hypothetical
protein CHGG_08952 - Chaetomium globosum CBS 148.51
Length = 1002
Score = 38.3 bits (85), Expect = 0.15
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 129 HMLARVSLVN----KFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL------INGEDFSI 178
H LARVS+V G+ D ++ RE V DY T+ SGI DL N +
Sbjct: 811 HALARVSVVRGQGEHEGEAFIDDYIAIREPVVDYLTLYSGITPGDLDPRTTKHNLVSLKV 870
Query: 179 VQKEVADVIR-GKILVGHSLKNDLNVLFLSHPKRNI 213
K++ ++ G +GH L+ D V+ + P+ +
Sbjct: 871 AYKKLWVLLNLGCKFLGHGLRQDFRVINIQVPRAQV 906
>UniRef50_Q4G099 Cluster: Rad52 protein; n=10; Euteleostomi|Rep:
Rad52 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 434
Score = 38.3 bits (85), Expect = 0.15
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 32 KLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQAD 91
+L +S+ L+D K++++ ++Q KFR+ + ++ + + KD QP TL+++ +Q
Sbjct: 275 ELSSSDPLLDSKQQRKLRQQQLQQKFRQEMEAKKLLQEKKDQQP------TLHIKQEQGV 328
Query: 92 GHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGND 128
G + N K + +++A D EM DG D
Sbjct: 329 GPVNHSTPNGHLVTKQE--QYLADDPEMWDFTLDGID 363
>UniRef50_A6ESS3 Cluster: DNA polymerase III, epsilon subunit; n=1;
unidentified eubacterium SCB49|Rep: DNA polymerase III,
epsilon subunit - unidentified eubacterium SCB49
Length = 460
Score = 38.3 bits (85), Expect = 0.15
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF---VKPREEVKDYRTIVSGIRKE 168
+ +D E G Y N+ + +++ G+ + D+F V P ++ + ++GI +
Sbjct: 3 YAILDIETTGGKY--NEEGITEIAIYRFDGEKVVDQFCSLVNPERPIQPFVVNLTGINSD 60
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
L N F V K + ++ + ILV H+ + D +L
Sbjct: 61 MLKNAPKFYEVAKRIVEITKDCILVAHNAQFDNRIL 96
>UniRef50_Q4Q7T4 Cluster: Ubiquitin hydrolase, putative; n=5;
Trypanosomatidae|Rep: Ubiquitin hydrolase, putative -
Leishmania major
Length = 1131
Score = 38.3 bits (85), Expect = 0.15
Identities = 39/105 (37%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 129 HM-LARVSLV--NKFGD--CIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDF------- 176
HM LARVS + +K GD I D +V EE++DY T SGI DL E
Sbjct: 875 HMGLARVSCILSSKDGDERTIVDDYVHIPEEIEDYVTQYSGIHPGDLDPLESSKSLTSLK 934
Query: 177 SIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
S K A V G + VGH L D V + P++ I L H
Sbjct: 935 STYLKLRALVDGGVVFVGHGLAQDFRVCNIVVPRKQIIDTLEIFH 979
>UniRef50_A5K441 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 5540
Score = 38.3 bits (85), Expect = 0.15
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 39 LMDHKEEKQAPKEQYTGKFRRNRK-------TEQKINKSKDLQPTVRKFETLNLEPDQAD 91
+M K+ KQ K++ T K R N+K E++ K+K+ + + F L PD +
Sbjct: 1294 IMQLKKMKQIVKKESTDKERENKKGQAQEIEEEEEEEKNKENEDPLMYFSYLRPHPDDTE 1353
Query: 92 GHEDDI--ALNDRKQAKNKITKF 112
ED I L+D ++ KN+ ++F
Sbjct: 1354 TKEDTIYFTLSDTRECKNEYSQF 1376
>UniRef50_A5E1W0 Cluster: PAB-dependent poly(A)-specific ribonuclease
subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent
poly(A)-nuclease); n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: PAB-dependent poly(A)-specific ribonuclease
subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent
poly(A)-nuclease) - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 1234
Score = 38.3 bits (85), Expect = 0.15
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL-ING 173
++ + G D N+++ + FG+ D ++ + + DY T SGI DL I+
Sbjct: 1046 INSNITGNNNDDNNNISGMIIDDPLFGEAFIDDYIVHKSHIYDYTTNFSGIEPNDLDIHK 1105
Query: 174 EDFSIVQKEVAD------VIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
++V + A + G I VGH L D + L P+ IR
Sbjct: 1106 SSKNLVTLQTAYRKLWLLLNLGVIFVGHGLYTDFRTINLQVPEEQIR 1152
>UniRef50_Q5KZZ7 Cluster: Hypothetical conserved protein; n=2;
Geobacillus|Rep: Hypothetical conserved protein -
Geobacillus kaustophilus
Length = 242
Score = 37.9 bits (84), Expect = 0.20
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF---VKPREEVKDYRTIVSGIRKE 168
F+ +D E G + D +LA ++ G + D + VKP + + ++ + ++GI +
Sbjct: 62 FVIIDMETTGFSPEQGDEILA-MAAAKTVGGVVTDAYMTLVKPEKPIPEHISALTGIEAK 120
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSH 208
D++ + + I +L+G+ + +DL FL H
Sbjct: 121 DVVFAPPLAEALRTFVPFIAAGVLIGYHIGHDL--AFLRH 158
>UniRef50_Q0UDJ5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 401
Score = 37.9 bits (84), Expect = 0.20
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFG-DCIYDKFVKPREEVKDYRTIVSGIRKEDLI 171
+A+DCEM G +G D L R++L++ F D + D V+P E+ T SG+ D+
Sbjct: 173 VAIDCEM-GQAANG-DSELIRITLIDYFSEDVLIDNLVEPEVEMAHLNTRYSGVTWGDIK 230
Query: 172 NG-EDFSIVQKEVAD-------VIRGKILVGHSLKNDLNVLFLSH 208
D +I++ + A V +VGH L NDL L H
Sbjct: 231 KARRDKTILRGKAAARKAIWRYVGPHTAVVGHGLVNDLRSLRWFH 275
>UniRef50_Q6F1H8 Cluster: DNA polymerase III alpha subunit; n=5;
Mollicutes|Rep: DNA polymerase III alpha subunit -
Mesoplasma florum (Acholeplasma florum)
Length = 1493
Score = 37.5 bits (83), Expect = 0.26
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 65 QKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGY 124
+KINK+K + ++ L + + ED + + K K + +K + D E G+
Sbjct: 396 KKINKNKAEEDKLKLIYGLEMNMIEK---EDYWIVKNPKGQKIRESKMVVFDLETTGLSP 452
Query: 125 DGNDHM-LARVSLVNKFGDCI-YDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKE 182
+ N+ + V G YD KP++ +K + ++ I E L + ++ +
Sbjct: 453 EFNEIIEFGAVVFDPVTGKTTKYDYLFKPKQPLKQFTIDLTNITPEMLEDKKNIDDDFDK 512
Query: 183 VADVIRGKILVGHSLKNDLNVL 204
+ ++I+ ILV H+ D N L
Sbjct: 513 IYELIKDSILVAHNANFDFNFL 534
>UniRef50_Q9EUN1 Cluster: Ycg4D; n=6; Bacteria|Rep: Ycg4D -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 296
Score = 37.5 bits (83), Expect = 0.26
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+ +D E G+GYD + +++ + G ++D +KP ++ V GI + LIN
Sbjct: 115 LVLDTETTGLGYDAQ---VIEIAIADASGKVLFDTRIKPTVAIEAAAQEVHGISPDALIN 171
Query: 173 GEDFSIVQKEVADVIRGKILV 193
+ V + ++ G+ ++
Sbjct: 172 APSWPEVANRIEALLSGRTVI 192
>UniRef50_Q15SW9 Cluster: Exonuclease, RNase T and DNA polymerase
III; n=1; Pseudoalteromonas atlantica T6c|Rep:
Exonuclease, RNase T and DNA polymerase III -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 251
Score = 37.5 bits (83), Expect = 0.26
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 110 TKFIAMDCEMVGIGYDGNDHM-LARVSLVNKFGDCIYDK--FVKPREEVKDYRTIVSGIR 166
T +A+D E G+ + + + V++ K C + +KP E+K ++ GI
Sbjct: 58 TPLVALDFETTGLNPKTDSIVSIGLVAMTVKRIRCQEAQHWIIKPDTELKTKSVVIHGIT 117
Query: 167 KEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLS 207
D+ + F+ V E+ ++GK++V H D+ V FL+
Sbjct: 118 HSDVADAPSFNRVLDELLQHLQGKVVVAH--HKDIEVRFLN 156
>UniRef50_A1Z7K9 Cluster: CG8232-PA; n=4; Sophophora|Rep: CG8232-PA -
Drosophila melanogaster (Fruit fly)
Length = 1241
Score = 37.5 bits (83), Expect = 0.26
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 129 HM-LARVSLVNKFGDC----IYDKFVKPREEVKDYRTIVSGIRKEDL--------INGED 175
HM +AR+S + G D ++ +E+V DY T SGI+ DL +
Sbjct: 1065 HMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALK 1124
Query: 176 FSIVQ-KEVADVIRGKILVGHSLKNDLNVLFLSHPKRNI 213
+S + K + DV G I VGH LKND V+ + P I
Sbjct: 1125 YSYQKLKYLVDV--GVIFVGHGLKNDFRVINIYVPSEQI 1161
>UniRef50_Q193G0 Cluster: DnaQ family exonuclease/DinG family
helicase, putative; n=2; Desulfitobacterium
hafniense|Rep: DnaQ family exonuclease/DinG family
helicase, putative - Desulfitobacterium hafniense
(strain DCB-2)
Length = 929
Score = 37.1 bits (82), Expect = 0.35
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 111 KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI--YDKFVKPREEVKDYRTIVSGIRKE 168
K + +D E G ND ++ +L + G+ + + PR +V + ++GI E
Sbjct: 5 KIVVIDIETTGFDIY-NDEIIEFAALCIEEGEEAEAFSVLISPRRQVPERILRLTGISPE 63
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+L + ++ D+ + I+VGH+++ DL L
Sbjct: 64 ELKQAGSLQAYRDKILDLFQDAIIVGHNVEFDLGFL 99
>UniRef50_Q03FN6 Cluster: Rad3-related DNA helicase; n=1;
Pediococcus pentosaceus ATCC 25745|Rep: Rad3-related DNA
helicase - Pediococcus pentosaceus (strain ATCC 25745 /
183-1w)
Length = 929
Score = 37.1 bits (82), Expect = 0.35
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF---VKPREEVKDYRTIVSGIR 166
TK+ +D EM G +DG D+ + ++ I D F V P+ + T ++GI
Sbjct: 4 TKYAVVDLEMTGSDFDG-DNRIIQIGCAFVENGKIVDTFQSKVNPQRPIPAGITKLTGIT 62
Query: 167 KEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
E + N F+ + EV + + V H+++ D L
Sbjct: 63 DEQVQNAPKFNDIVDEVYRKLVDTVFVAHNVEFDFPFL 100
>UniRef50_Q00YG0 Cluster: Chromosome 11 contig 1, DNA sequence; n=2;
Ostreococcus|Rep: Chromosome 11 contig 1, DNA sequence -
Ostreococcus tauri
Length = 243
Score = 37.1 bits (82), Expect = 0.35
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLV-NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL- 170
+++D E V G +D +A++++V + + D FVK +EV+ Y T ++GI KE L
Sbjct: 29 VSLDVECVATGPKHHDRSVAQIAVVCARTERVLCDVFVKQTKEVRSYLTPLTGIDKETLE 88
Query: 171 INGEDFSIVQKEVADVIRGK-ILVGHSLKNDL 201
G + V V+ + ++VG + D+
Sbjct: 89 TRGIPLDEALERVRSVLGPRHVVVGQGVLKDV 120
>UniRef50_Q4UHA5 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 991
Score = 37.1 bits (82), Expect = 0.35
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 44 EEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRK 103
E+K+A KE+ TGK + ++K KS + +PT +K E+ + + E D+ + +K
Sbjct: 690 EKKKADKEE-TGKKKESKKESSDKKKSTEKKPTEKKKES---DSQEESKEESDVQIKKKK 745
Query: 104 QAKNKITK 111
K+K+ K
Sbjct: 746 GIKSKLGK 753
>UniRef50_Q96YR5 Cluster: DNA double-strand break repair rad50
ATPase; n=2; Sulfolobus tokodaii|Rep: DNA double-strand
break repair rad50 ATPase - Sulfolobus tokodaii
Length = 879
Score = 37.1 bits (82), Expect = 0.35
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 59 RNRKTEQKINKSKDLQPTVRKFETLNL-EPDQADGHEDDIALNDRKQAKNK 108
+N QKI K K+L+ R+ E LN+ E + +ED + LN+ ++ K K
Sbjct: 193 KNESENQKIQKEKELENIKRELEDLNIKEEKERKKYEDIVKLNEEEEKKEK 243
>UniRef50_Q9CGW0 Cluster: DNA polymerase III, epsilon chain; n=3;
Lactococcus lactis|Rep: DNA polymerase III, epsilon
chain - Lactococcus lactis subsp. lactis (Streptococcus
lactis)
Length = 277
Score = 36.7 bits (81), Expect = 0.46
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 111 KFIAMDCEMVGIGYDGNDHM-LARVSL-VNKFGDCIYDKFVK-PREEVKDYRTIVSGIRK 167
K++ D E G N+ + + V N +++ VK R V T ++GI+
Sbjct: 4 KYVVFDFETTGFSAQKNEIIQIGAVKYDENNQEQARFNQLVKNQRSYVSTEITQLTGIKP 63
Query: 168 EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLF 205
DL+N + E D I+G +LV H+ D++ L+
Sbjct: 64 ADLLNQPTIEEILPEFLDFIKGHLLVAHNAPFDISFLY 101
>UniRef50_Q8EQD9 Cluster: ATP-dependent DNA helicase; n=1;
Oceanobacillus iheyensis|Rep: ATP-dependent DNA helicase
- Oceanobacillus iheyensis
Length = 939
Score = 36.7 bits (81), Expect = 0.46
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 109 ITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDK---FVKPREEVKDYRTIVSGI 165
+ +F+ +D E G ND ++ + +V GD I D F P + + + T ++GI
Sbjct: 1 MNRFVVIDLETTGHAPSKNDKII-EIGMVIIEGDEIIDTKTTFFNPGQPIPPFITNLTGI 59
Query: 166 RKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+D+ + F+ + ++ ++ H++ DL L
Sbjct: 60 SDDDVADAPLFTEKALSIKSILEDSYIIAHNVNFDLGFL 98
>UniRef50_A7K3S7 Cluster: DNA polymerase III, alpha subunit; n=2;
Vibrio sp. Ex25|Rep: DNA polymerase III, alpha subunit -
Vibrio sp. Ex25
Length = 226
Score = 36.7 bits (81), Expect = 0.46
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
I +D E G+G D ++ ++ G+ I D+ VKP + T + GI ED+ +
Sbjct: 31 IIIDTETTGLGADAE--IVEFTAICANSGEVIVDELVKPTCSIPADATAIHGITNEDVKD 88
Query: 173 GEDFSIV-QKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
DF ++ ++ G+ ++ ++ D ++ S K ++ + H
Sbjct: 89 APDFHLMFSNRFLPLLNGRPIIIYNSDFDTRLIIQSLDKHCNAAYVQSVH 138
>UniRef50_A6ATQ8 Cluster: Gp41; n=4; Vibrio|Rep: Gp41 - Vibrio
harveyi HY01
Length = 218
Score = 36.7 bits (81), Expect = 0.46
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 97 IALNDRKQAKNKIT--KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREE 154
+ LN + A K++ I +D E G+G D ++ ++ G I ++ VKP
Sbjct: 3 VTLNSQGVAMKKLSTENAIIIDTETTGLGSDAE--IVEFTAICADSGKVIVNELVKPTCS 60
Query: 155 VKDYRTIVSGIRKEDLINGEDFSIV-QKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNI 213
+ T + GI ED+ + DF +V ++ G+ ++ ++ D ++ S K
Sbjct: 61 IPADATAIHGITNEDVKDAPDFHLVFSNHFLPLLNGRPIIIYNSDFDTRLIIQSLDKHCN 120
Query: 214 RTHLSTNH 221
++ + H
Sbjct: 121 AAYVQSVH 128
>UniRef50_Q5CTD1 Cluster: Cus1p U2 snRNP protein; n=2;
Cryptosporidium|Rep: Cus1p U2 snRNP protein -
Cryptosporidium parvum Iowa II
Length = 602
Score = 36.7 bits (81), Expect = 0.46
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 40 MDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIAL 99
+++K+ + K+Q + R+ RK+EQ N+ KDL T K T N+ ++ + E+DI
Sbjct: 45 LEYKKLQNKLKKQRNKENRKKRKSEQVGNQYKDLLKTNEKRLTNNIS-NREEKEEEDIVF 103
Query: 100 NDRKQAKNKITKFIAMDCEMVGIGYD 125
+ Q +++ K C+++ IG D
Sbjct: 104 --KIQENDELKKMFGESCKLL-IGLD 126
>UniRef50_UPI0000DB7746 Cluster: PREDICTED: similar to CG8232-PA; n=2;
Apocrita|Rep: PREDICTED: similar to CG8232-PA - Apis
mellifera
Length = 1301
Score = 36.3 bits (80), Expect = 0.61
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 141 GDCIYDKFVKPREEVKDYRTIVSGIRKEDL---INGEDF----SIVQKEVADVIRGKILV 193
G D ++ +E+V DY T SGI+ DL + + S QK V G + V
Sbjct: 1142 GTPFIDDYISTQEQVVDYLTKFSGIQPGDLDANFSSKHLTTLKSTYQKLRFLVDNGIMFV 1201
Query: 194 GHSLKNDLNVLFLSHPKRNI 213
GH LKND V+ L P I
Sbjct: 1202 GHGLKNDFRVINLVVPPEQI 1221
>UniRef50_UPI000023E8D0 Cluster: hypothetical protein FG08390.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08390.1 - Gibberella zeae PH-1
Length = 1130
Score = 36.3 bits (80), Expect = 0.61
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 30/167 (17%)
Query: 65 QKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGY 124
Q N + D PT + + L+ + D+ G IAL+ T+F+A+ + +
Sbjct: 777 QDFNPNAD--PTTKTYRVLDPD-DEVPGPNTIIALD---------TEFVAVRQPEIEMNS 824
Query: 125 DGND-------HMLARVSLVNKFGDC----IYDKFVKPREEVKDYRTIVSGIRKEDL--- 170
DG + LAR S+V G+ D ++ RE + DY T SGI ++DL
Sbjct: 825 DGERETIRPIVYALARASVVRGTGEDEGMPFIDDYISIREPIVDYLTSYSGITEQDLDPR 884
Query: 171 INGED---FSIVQKEVADVIR-GKILVGHSLKNDLNVLFLSHPKRNI 213
++ +V K++ ++ G +GH LK D V+ + PK +
Sbjct: 885 VSKHSLLPLKMVYKKMWILLNLGCKFLGHGLKQDFRVINIHIPKSQV 931
>UniRef50_Q5FJX1 Cluster: ATP-dependent DNA helicase; n=5;
Lactobacillus|Rep: ATP-dependent DNA helicase -
Lactobacillus acidophilus
Length = 927
Score = 36.3 bits (80), Expect = 0.61
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 107 NKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCI--YDKFVKPREEVKDYRTIVSG 164
NK T F +D E G + H++ + K + Y + P E+ ++G
Sbjct: 6 NKDT-FAVVDLETTGTQRENGHHIIQFGCAIIKNMKVVKTYSFLINPHREIPQSVVNLTG 64
Query: 165 IRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
I ED+ +DF ++ +++ + V H++ DL L
Sbjct: 65 ISNEDVQKQKDFDYYAPKIVSILQDTVFVAHNVDFDLPFL 104
>UniRef50_Q7QG93 Cluster: ENSANGP00000002784; n=3; Culicidae|Rep:
ENSANGP00000002784 - Anopheles gambiae str. PEST
Length = 1226
Score = 36.3 bits (80), Expect = 0.61
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 129 HM-LARVSLVNKFGDC----IYDKFVKPREEVKDYRTIVSGIRKEDL-INGEDFSIV--- 179
HM +AR++ + GD D ++ +E+V DY T SGI+ DL N + +
Sbjct: 1051 HMSVARITCIRGQGDYEGVPFMDDYISTQEQVVDYLTKFSGIKPGDLDANFSNKRLTTLK 1110
Query: 180 ---QKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNI 213
QK V G I VGH L+ND V+ + P +
Sbjct: 1111 NSYQKLRFLVDSGVIFVGHGLRNDFRVINIIVPPEQV 1147
>UniRef50_Q6FPV2 Cluster: Similar to sp|P08964 Saccharomyces
cerevisiae YHR023w MYO1; n=1; Candida glabrata|Rep:
Similar to sp|P08964 Saccharomyces cerevisiae YHR023w
MYO1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1884
Score = 36.3 bits (80), Expect = 0.61
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 5 SHKRKRTA--SDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRK 62
+ K+ TA +D N+ ++ L++ +KL + L+ E+Q E + R ++
Sbjct: 853 TEKKIHTAKHNDLLNELNDVKNLLDVEKEKLKRNEQLLSKSNEQQREIETMIKEIREDKS 912
Query: 63 T-----EQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDC 117
T E I+K ++L+ +K E N E D A E L+ + K IT+ I+MD
Sbjct: 913 TLLSEKEAAISKIQELELVRQKLEEKNNEKD-ASIAELTRKLSSLESEKGDITRQISMDT 971
Query: 118 EMV 120
E++
Sbjct: 972 EVL 974
>UniRef50_P53015 Cluster: Uncharacterized protein F31E3.4; n=2;
Caenorhabditis|Rep: Uncharacterized protein F31E3.4 -
Caenorhabditis elegans
Length = 1131
Score = 36.3 bits (80), Expect = 0.61
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 131 LARVSLVNKFGD-CIYDKFVKPREEVK--DYRTIVSGIRKEDLI--NGEDFSIVQKEV-- 183
+ R S V+ G+ I+D VK ++V+ DY T SGI K DL E + K +
Sbjct: 935 VGRASCVDSTGERIIFDDHVKLTDDVEVVDYLTKFSGIVKADLCPTTSEKYLTTHKRLLL 994
Query: 184 ---ADVIRGKILVGHSLKNDLNVL 204
+ RG VGH+L ND VL
Sbjct: 995 RMHVLIQRGVTFVGHALHNDFTVL 1018
>UniRef50_Q6C462 Cluster: PAB-dependent poly(A)-specific
ribonuclease subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent
poly(A)-nuclease); n=2; Yarrowia lipolytica|Rep:
PAB-dependent poly(A)-specific ribonuclease subunit PAN2
(EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease) -
Yarrowia lipolytica (Candida lipolytica)
Length = 1008
Score = 36.3 bits (80), Expect = 0.61
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 131 LARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIR-- 188
LARV+L+N+ G + ++ E + DY T SGI DL D SI +K + +
Sbjct: 839 LARVTLLNEDGHPFINDYIAINEHIVDYLTAFSGIEPGDL----DPSISRKPLVSLPTSY 894
Query: 189 ---------GKILVGHSLKNDLNVLFLSHPKRNI 213
G + VGH L ND + + P +
Sbjct: 895 RRLWLLLNLGCVFVGHGLANDFRTINMQVPPEQV 928
>UniRef50_Q5HP88 Cluster: Probable ATP-dependent helicase dinG
homolog; n=17; Staphylococcus|Rep: Probable
ATP-dependent helicase dinG homolog - Staphylococcus
epidermidis (strain ATCC 35984 / RP62A)
Length = 902
Score = 36.3 bits (80), Expect = 0.61
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 109 ITKFIAMDCEMVGIGYDGNDHMLARVSLV--NKFGDCIYDKFVKPREEVKDYRTIVSGIR 166
I F +D E G D ++ + ++ V N+ D Y ++ E+ + ++ I
Sbjct: 3 IATFAVVDLETTGNQLDYDEIIQIGITFVRQNQVIDT-YHSMIRTDLEIPPFIQALTSIE 61
Query: 167 KEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+E L+ F+ V ++ +I+ + V H++ DLN + + K NI+
Sbjct: 62 EEMLVQAPYFNEVADDIYQLIKDCVFVAHNISFDLNFIKKAFEKCNIQ 109
>UniRef50_Q97RK4 Cluster: DNA polymerase III, epsilon
subunit/ATP-dependent helicase DinG; n=11; Streptococcus
pneumoniae|Rep: DNA polymerase III, epsilon
subunit/ATP-dependent helicase DinG - Streptococcus
pneumoniae
Length = 816
Score = 35.9 bits (79), Expect = 0.81
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 145 YDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
Y V P E + + ++G+ + L DFS V +++ D++ I V H+++ D N+L
Sbjct: 41 YTTDVNPHEPLDAHIKELTGLTDQRLAQAPDFSQVARKIFDLVEDGIFVAHNVQFDANLL 100
>UniRef50_Q4A745 Cluster: DNA polymerase III alpha subunit; n=1;
Mycoplasma synoviae 53|Rep: DNA polymerase III alpha
subunit - Mycoplasma synoviae (strain 53)
Length = 1451
Score = 35.9 bits (79), Expect = 0.81
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 104 QAKNKIT-KFIAMDCEMVGIG-YDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTI 161
Q ++ IT +++ D E + Y G A + NK D F+K +E++ + T
Sbjct: 402 QNQDLITGRYVVFDIETTSLSAYHGEIIEFAATIIENKAVVDKVDIFIKSKEKLSHFTTR 461
Query: 162 VSGIRKEDLIN-GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
++ I E L G + +++ DV+ + V H+ D N L + N++
Sbjct: 462 LTSITNEMLDQKGIELKEALQKIYDVLNNNVAVAHNANFDYNFLIEKFDQNNMQ 515
>UniRef50_Q1MZX4 Cluster: Putative uncharacterized protein; n=1;
Oceanobacter sp. RED65|Rep: Putative uncharacterized
protein - Oceanobacter sp. RED65
Length = 738
Score = 35.9 bits (79), Expect = 0.81
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 77 VRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSL 136
+R+ + ++L+ + +G + + D K N ++ +D E G + H + V +
Sbjct: 540 LRRNQLISLQSLKRNGFDVRVQTTDWKI--NPEQPYVIVDVETTGGRKE--QHRVTEVGM 595
Query: 137 VNKFGDCIYDKF---VKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILV 193
V I D++ + P + T ++GI E + N F V E+A+ G + V
Sbjct: 596 VKVLNGEIVDEWQSLINPMRHIPQSITRLTGISNEMVSNAPVFDDVADEIAEFCAGSVFV 655
Query: 194 GHSLKND 200
H++ D
Sbjct: 656 AHNVNFD 662
>UniRef50_A2TNW8 Cluster: DNA polymerase III, epsilon subunit; n=1;
Dokdonia donghaensis MED134|Rep: DNA polymerase III,
epsilon subunit - Dokdonia donghaensis MED134
Length = 466
Score = 35.9 bits (79), Expect = 0.81
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF---VKPREEVKDYRTIVSGIRKEDLI 171
+D E G G +GN + ++ K G+ I DKF V P + + + T ++GI +
Sbjct: 12 IDVETTGKGINGN-RITEFCAVRLKDGEII-DKFTSLVNPEQYIPPFITNLTGIDDAMVE 69
Query: 172 NGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+ F + + V ++ G I V H++ D NV+
Sbjct: 70 DAPLFEEIAQRVLEITEGAIFVAHNVNFDFNVI 102
>UniRef50_Q7R621 Cluster: GLP_81_22513_21725; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_22513_21725 - Giardia lamblia
ATCC 50803
Length = 262
Score = 35.9 bits (79), Expect = 0.81
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 131 LARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGK 190
LAR+ ++ IY+ P + DYRT + + D + V+ EV + K
Sbjct: 60 LARLIAIDSSKRIIYNSVFLPYAPITDYRTPETSLTAADFEGAISIADVRSEVRKFLVNK 119
Query: 191 ILVGHSLKNDLNVLFLSHPKRNIRTHLSTNHS 222
+L G + + LN L + P R I L NHS
Sbjct: 120 VL-GFNTQKILNQLGVHVPSRRI---LDLNHS 147
>UniRef50_Q6CD76 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 191
Score = 35.9 bits (79), Expect = 0.81
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 57 FRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDI 97
FRR RK+E ++ K K + ++K ET+ +EP++ G D+
Sbjct: 100 FRRERKSEARLEKLKKKKLALKKEETVEVEPEEVAGEMVDV 140
>UniRef50_Q2TZY8 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 267
Score = 35.9 bits (79), Expect = 0.81
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 141 GDCIYDKFVKPREEVKDYRTIVSGIRK----EDLINGE---DFSIVQKEVADVIRGK-IL 192
G+ + + +V+P +V D+ T +SGI E + G+ + ++E+ I + IL
Sbjct: 22 GEVLINNYVRPTGKVTDWTTRISGITPAAMAEAVARGQALNGWQSARQELYKYIDSQTIL 81
Query: 193 VGHSLKNDLNVLFLSHPK 210
+GH+L +DL+VL + H +
Sbjct: 82 IGHALNSDLDVLGIYHSR 99
>UniRef50_O68045 Cluster: DNA polymerase III subunit epsilon-like
protein; n=5; Rhodobacteraceae|Rep: DNA polymerase III
subunit epsilon-like protein - Rhodobacter capsulatus
(Rhodopseudomonas capsulata)
Length = 704
Score = 35.9 bits (79), Expect = 0.81
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 107 NKITKFIAMDCEMVGIGYDGNDHM--LARVSLVN--KFGDCIYDKFVKPREEVKDYRTIV 162
+K+T F+ D E G+ G D + +A V +VN + ++D V P + T V
Sbjct: 506 DKLT-FVVFDTETTGLFPTGGDEIVQIAAVRIVNGRRVAGEVFDTLVNPGRPIPAASTAV 564
Query: 163 SGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
GI + + + V + G +LV H+ DL L
Sbjct: 565 HGITEAMVATAPAIAEVGRRFHKFAEGAVLVAHNAPFDLEFL 606
>UniRef50_Q7NAQ3 Cluster: CpsG; n=1; Mycoplasma gallisepticum|Rep:
CpsG - Mycoplasma gallisepticum
Length = 559
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 104 QAKNKITKFIAMDCEMVGIGYDGNDHMLARV--SLVNK-FGDCIYDKFVKPREEVKDYRT 160
Q KI F+ CE++ + Y ND ++ + + ++ F D D + +EVKD++
Sbjct: 181 QDAQKIIDFMPKSCEILNLEYQPNDRLVKFIPDEIYDRYFADIYRDLYTTDHKEVKDFKV 240
Query: 161 IVSG 164
I +G
Sbjct: 241 IFTG 244
>UniRef50_A5IXK4 Cluster: DNA polymerase III alpha subunit; n=1;
Mycoplasma agalactiae|Rep: DNA polymerase III alpha
subunit - Mycoplasma agalactiae
Length = 1459
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 148 FVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQ--KEVADVIRGKILVGHSLKNDLNVL 204
F+KP+ ++ + T ++GI ++ +++ E SI + + D + GK+ + H+ K D N L
Sbjct: 463 FIKPQAKIGAFTTELTGITQQ-MLDSEGLSIKDGLQRIYDCLDGKVAIAHNAKFDFNFL 520
>UniRef50_Q8ILP6 Cluster: Glycine--tRNA ligase, putative; n=8;
Plasmodium|Rep: Glycine--tRNA ligase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 879
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/140 (18%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 40 MDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIAL 99
++ +K +++ + + +K + IN++K+ + N E ++ + ++++
Sbjct: 259 IEELRKKNTKGDEHVDEKEKKQKRDDDINENKENNKNNENNK--NDENNENNKNDENNKN 316
Query: 100 NDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYR 159
ND N + +C+MVG ++GN+ ++ ++ L+ + D + ++ +K E +K+Y
Sbjct: 317 NDNNNNNNNSCNY---NCDMVGGLHNGNERLIQKIELILRKLDGMNEEEIK--EIIKEYN 371
Query: 160 TIVSGIRKEDLINGEDFSIV 179
+ K DL F+++
Sbjct: 372 --IKSPLKNDLSEPFPFNLM 389
>UniRef50_Q238V8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 620
Score = 35.5 bits (78), Expect = 1.1
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 3 ENSHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRK 62
++S++R+ +S D++ +N ++ SNL ++ Q +QY K R
Sbjct: 314 QSSYRRQHNSSQDYSNQQRNNESLNKENERFQKSNL--SDTQKYQNKYDQYITKDEHERM 371
Query: 63 TEQKINKSKDLQPTVRKF----ETLNLEPD-QADGHEDDIALNDRKQAK 106
E+ I + +DL+ + K +T N++ D Q +ED I N + ++K
Sbjct: 372 REKFIRQIEDLESQINKLNNDVKTKNIDIDTQKSVNEDLIKKNQKLESK 420
>UniRef50_Q59QN1 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 1278
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 44 EEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEP 87
E K+ K+ K +++ +EQK ++K L+PT RKFE N P
Sbjct: 694 EPKKLKKKNTISKKTKSKTSEQKQIETKQLEPTKRKFEEPNTSP 737
>UniRef50_Q5KHY2 Cluster: PAB-dependent poly(A)-specific ribonuclease
subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent
poly(A)-nuclease); n=2; Eukaryota|Rep: PAB-dependent
poly(A)-specific ribonuclease subunit PAN2 (EC 3.1.13.4)
(PAB1P-dependent poly(A)-nuclease) - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1183
Score = 35.5 bits (78), Expect = 1.1
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 111 KFIAMDCEMVGIGYDGN------DHM-LARVSLVNKFGDC----IYDKFVKPREEVKDYR 159
+F+A+ E + DG HM LARVS++ G+ D ++ E V DY
Sbjct: 921 EFVALQQEEMEFRSDGTKNILRPSHMSLARVSVLRGEGEMEGKPFIDDYIHTSEAVVDYL 980
Query: 160 TIVSGIRKEDL-INGEDFSIVQKEVAD------VIRGKILVGHSLKNDLNVLFLSHPKRN 212
T SGI+ DL N ++V +VA V G I VGH L D + + P
Sbjct: 981 TEFSGIKAGDLDPNNSPHTLVPLKVAYKKLRLLVDLGCIFVGHGLSKDFRTINIFVPPEQ 1040
Query: 213 I 213
+
Sbjct: 1041 V 1041
>UniRef50_Q6FS70 Cluster: PAB-dependent poly(A)-specific ribonuclease
subunit PAN2 (EC 3.1.13.4) (PAB1P-dependent
poly(A)-nuclease); n=1; Candida glabrata|Rep:
PAB-dependent poly(A)-specific ribonuclease subunit PAN2
(EC 3.1.13.4) (PAB1P-dependent poly(A)-nuclease) -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1093
Score = 35.5 bits (78), Expect = 1.1
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 11/111 (9%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVN----KFGDCIYDKFVKPREEVKDYRTIVSGIRKEDL 170
+DC LAR+S+V +FG D ++ + + DY T SGI DL
Sbjct: 904 IDCRGAKTVVQSKVSALARISVVRGNEEQFGVPFIDDYIIIEKNIDDYLTKFSGILPGDL 963
Query: 171 I-NGEDFSIVQKEVAD------VIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ +V + VA + G +GH L+ND + +S PK IR
Sbjct: 964 DPKTSNKHLVPRNVAYRKIWLLMQLGCTFIGHGLQNDFKHINISVPKEQIR 1014
>UniRef50_Q8UDP4 Cluster: DNA polymerase III, epsilon subunit; n=3;
Rhizobium/Agrobacterium group|Rep: DNA polymerase III,
epsilon subunit - Agrobacterium tumefaciens (strain C58
/ ATCC 33970)
Length = 202
Score = 35.1 bits (77), Expect = 1.4
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 144 IYDKFVKPRE-EVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLN 202
+ ++ ++PR+ + V GIR D+ + +F V +E D G ++ H+ D +
Sbjct: 34 VEERLIRPRDMRFSPFNIAVHGIRPRDVEDAPEFPEVMEEFIDDFHGATMIAHNAAFDFS 93
Query: 203 VLFLSHPK 210
V+ S K
Sbjct: 94 VMRASFDK 101
>UniRef50_A6Q1S7 Cluster: DNA polymerase III, epsilon subunit; n=1;
Nitratiruptor sp. SB155-2|Rep: DNA polymerase III,
epsilon subunit - Nitratiruptor sp. (strain SB155-2)
Length = 276
Score = 35.1 bits (77), Expect = 1.4
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 80 FETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVN- 138
+ETL D E+ I L K IT + + +V I +G+ ++V +
Sbjct: 39 YETLKARGFPLDEKENTIFL------KTAITPYQEQEFVVVDIETNGSKPEFSQVIEIGA 92
Query: 139 -KF-GDCIYDKFVK--PREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVG 194
KF G+ I D+F E+V +Y + ++GI +EDL N V + ++ + V
Sbjct: 93 IKFKGNTIIDRFESFIYAEDVPEYISKLTGILQEDLENAPSQKEVLLSFKEFLQDAVFVA 152
Query: 195 HSLKNDLNVL 204
H+++ D N +
Sbjct: 153 HNVRFDYNFI 162
>UniRef50_A4CM07 Cluster: DNA polymerase III, epsilon subunit; n=1;
Robiginitalea biformata HTCC2501|Rep: DNA polymerase
III, epsilon subunit - Robiginitalea biformata HTCC2501
Length = 456
Score = 35.1 bits (77), Expect = 1.4
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVN----KFGDCIYDKFVKPREEVKDYRTIVSGIRK 167
+ +D E G G GN + ++L N + D Y V P E+ + T ++GI
Sbjct: 2 YTVVDIETTGNGIYGN--RITEIALFNIDQGRIADS-YSTLVNPGCEIPAFITGLTGITT 58
Query: 168 EDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+ N DFS + ++ G++ V HS+ D ++
Sbjct: 59 AMVRNAPDFSEIAPKIDAFSSGRVFVAHSVNFDYPIV 95
>UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 895
Score = 35.1 bits (77), Expect = 1.4
Identities = 21/110 (19%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 2 VENSHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNR 61
V++ K+ D + +N +++ N + +++E+++ +E K N+
Sbjct: 245 VDSIINEKKKKHDSSVSDLDWLSKFRSNNDEIIEKNQSIVYRDEEESEEEDVNNK--ENK 302
Query: 62 KTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITK 111
K + KI+ +K+ + +K + N + + DG +D+ + K ++ TK
Sbjct: 303 KDKMKIDDNKENKKEKKKDKKKNKKDNDNDGDDDESKIKPIKYFEHDYTK 352
>UniRef50_Q23PY5 Cluster: Leucine Rich Repeat family protein; n=1;
Tetrahymena thermophila SB210|Rep: Leucine Rich Repeat
family protein - Tetrahymena thermophila SB210
Length = 740
Score = 35.1 bits (77), Expect = 1.4
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 39 LMDHKEEKQAPKEQYTG----KFRRNRKTEQKINKSKDLQPT-VRKFETLNLEPDQADGH 93
L KEE EQ T K+++ K E+K N ++L+ T + K LE +
Sbjct: 522 LSKKKEESHLQVEQTTNYFYSKYQQEYKLEKKKNFIENLKDTLIPKQNDKQLEDKDLKEY 581
Query: 94 EDDIALNDRKQAKNK 108
EDD+ L RKQ K K
Sbjct: 582 EDDLYLQKRKQDKEK 596
>UniRef50_A2E289 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 280
Score = 35.1 bits (77), Expect = 1.4
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 14 DDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDL 73
D+H ++ + + ++KL A LL +E+KQ +E ++N +N+S +
Sbjct: 130 DEHATDKVIKDSLESKFEKLEAEQLLKQEQEDKQRLEE-----LKQN--YNDNVNQSNSI 182
Query: 74 QPTVRKFETLN-LEPDQADGHEDDIALNDRKQAKNK 108
Q E L L P+ ADG + I L + K+ K
Sbjct: 183 QTKRENMEKLQLLPPEPADGVQMAILLPNNKKVMRK 218
>UniRef50_A7EY58 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 456
Score = 35.1 bits (77), Expect = 1.4
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVN-KFGDCIYDKFVKPREEVKDYRTIVSGIRKE 168
T+ I +DCEM GY + L R++ + G + D V+P E+ D + SGI +
Sbjct: 190 TQPICIDCEM---GYTVHGLELIRLTATSWPSGSSLLDILVRPYGEILDLNSRYSGIYPQ 246
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLF 205
D+ + +S ++ +GK+ + S ++LF
Sbjct: 247 DITSAVPYSFPGSQLLAESKGKLRIVDSPAIARSLLF 283
>UniRef50_Q2SPW2 Cluster: Putative exonuclease; n=3; Hahella
chejuensis KCTC 2396|Rep: Putative exonuclease - Hahella
chejuensis (strain KCTC 2396)
Length = 192
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
++ + +D E G+ D ++ +S+++ G+ ++D+ V+P V + G+ E
Sbjct: 15 SRVVVLDTETTGL--DDQAEVI-EISVMDMRGNVLFDQLVRPLNPVPPEAAEIHGVTNEK 71
Query: 170 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
L N +F V + I G+ +V ++ D +L
Sbjct: 72 LANKPNFPDVYISLWRAIGGRTVVAYNADFDRRLL 106
>UniRef50_A5MUE3 Cluster: Putative uncharacterized protein; n=1;
Streptococcus pneumoniae SP23-BS72|Rep: Putative
uncharacterized protein - Streptococcus pneumoniae
SP23-BS72
Length = 308
Score = 34.7 bits (76), Expect = 1.9
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLI 171
FIA+D E + G+ + V ++ + + P E+ + I+ ED+I
Sbjct: 5 FIALDVETAN-SFRGSLCSIGLVKFIDGQEVDSFYTLINPEEKFSSRNIKIHAIKPEDVI 63
Query: 172 NGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
F VQKE+ + I +V H+ + D L
Sbjct: 64 GAPTFPEVQKEIINFIDNLPIVAHNARFDAYAL 96
>UniRef50_A4M5M6 Cluster: DNA polymerase III, alpha subunit; n=1;
Petrotoga mobilis SJ95|Rep: DNA polymerase III, alpha
subunit - Petrotoga mobilis SJ95
Length = 1388
Score = 34.7 bits (76), Expect = 1.9
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 103 KQAKNKITKFIAMDCEMVGIGYDGNDHM-LARVSLVNKFGDCIYDKFVKPREEVKDYRTI 161
K K T+F+ D E G+ N+ + + V + N + + VKPR+ V ++ +
Sbjct: 373 KDKKISETEFVVFDLETTGLEPAMNEIIEIGAVKIKNMKIVSKFHRLVKPRKPVSNFTSN 432
Query: 162 VSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHS 196
+GI + L + V + I G +LV H+
Sbjct: 433 FTGITNQMLEVEKPIEEVLPQFLSFIEGAVLVAHN 467
>UniRef50_A1ZC44 Cluster: DNA polymerase III, epsilon subunit; n=1;
Microscilla marina ATCC 23134|Rep: DNA polymerase III,
epsilon subunit - Microscilla marina ATCC 23134
Length = 463
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF---VKPREEVKDYRTIVSGIRKE 168
+ +D E G+ D + +++ G+ + D F V P + D T ++GI +
Sbjct: 2 YTIIDVETTGLR--PTDDKITEIAIYKHDGESVVDSFHSLVNPECYISDRITQITGITND 59
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKND 200
+ N F + K++ + G + V H+ D
Sbjct: 60 MVANAPKFYEIAKDILAITEGTVFVAHNAHFD 91
>UniRef50_Q22LM9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1552
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 40 MDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLN-LEPDQADGHEDDIA 98
MD EE+ ++QY + + + E K+ K QP ++K E L+ ++ D A + +
Sbjct: 1159 MDQNEEQSDERDQYDQQLEKEQHQETKLQK----QPVIQKIENLDVIDNDLAQNSQTESK 1214
Query: 99 LNDRKQAKNKITKF 112
+ KQ++ K+ F
Sbjct: 1215 ESVEKQSEMKLICF 1228
>UniRef50_Q18263 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 673
Score = 34.7 bits (76), Expect = 1.9
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 KLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQAD 91
K +S+ D K+EK+ KE+ + K ++ +K ++K KSK ++P E +N D +
Sbjct: 4 KSRSSSKEKDSKKEKKKDKEK-SSKEKKEKK-DKKEKKSKTIKPEPEP-EPVNEYEDDFE 60
Query: 92 GHEDDIALNDRKQAK 106
+EDD +D ++ K
Sbjct: 61 DYEDDFEEDDEEEKK 75
>UniRef50_A2ERV4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1095
Score = 34.7 bits (76), Expect = 1.9
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 5 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTE 64
S+ +K D N T ++ LIN + +N L D +E + E+Y N KT+
Sbjct: 555 SNLQKSKEESDKNLTEKIQNLIN---DRTKLNNTLNDLSKENKEITEKYQNLSSENEKTK 611
Query: 65 -QKINKSKDLQPTVRKFETLNLEPDQADGHEDDI--ALNDRKQAKNK 108
Q N K+L ++ T+ + + D+ LND K+ K +
Sbjct: 612 SQNQNLEKNLDLATKELSTIKEQNKELVKQNQDMQTELNDLKKFKQE 658
>UniRef50_A5E373 Cluster: Putative uncharacterized protein; n=4;
Saccharomycetales|Rep: Putative uncharacterized protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 1225
Score = 34.7 bits (76), Expect = 1.9
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 51 EQYTGKFRRNRKTEQKINKSK-DLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKI 109
EQ+ G R N K ++ D +P R + L P H+DD + DR Q +N I
Sbjct: 946 EQFLGLNRTNEKANHSLDDEVLDRRPKPRARSSYELHPQNGTRHKDDNFMVDR-QFENHI 1004
Query: 110 TKFIAMDCEMVGIGYDGN 127
+ + + GY GN
Sbjct: 1005 NERMKLTQTWKNKGYKGN 1022
>UniRef50_Q9WYW6 Cluster: DNA polymerase III, epsilon subunit,
putative; n=2; Thermotoga|Rep: DNA polymerase III,
epsilon subunit, putative - Thermotoga maritima
Length = 189
Score = 34.3 bits (75), Expect = 2.5
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIY-----DKFVKPREEVKDYRTIVSG 164
T F +D E G D ++ ++ V F IY V PR + V G
Sbjct: 9 TVFCVVDTETTGTDPFAGDRIV-EIAAVPVFKGKIYRNKAFHSLVNPRIRIPALIQKVHG 67
Query: 165 IRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
I D++ D V D ++G +LV H+ DL L
Sbjct: 68 ISNMDIVEAPDMDTVYDLFRDYVKGTVLVFHNANFDLTFL 107
>UniRef50_Q839U7 Cluster: DNA polymerase III, epsilon subunit; n=1;
Enterococcus faecalis|Rep: DNA polymerase III, epsilon
subunit - Enterococcus faecalis (Streptococcus faecalis)
Length = 289
Score = 34.3 bits (75), Expect = 2.5
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 106 KNKITKFIAMDCEMVGIGYDGNDHM-LARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSG 164
+ ++ +FIA D E G+ + + + ++ V+ +D V + + D T ++G
Sbjct: 2 QTEVKEFIAFDIETTGLDFHQDAVIQISAARYVDGIEVDYFDTLVNS-DYIPDEITKLTG 60
Query: 165 IRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 199
I + ++N V + D + ILVGH++K+
Sbjct: 61 ITNDQVLNAPTLDEVMPYLFDYLGDTILVGHNIKS 95
>UniRef50_Q66BA7 Cluster: Similar to Orf81 bacteriophage 186; n=2;
root|Rep: Similar to Orf81 bacteriophage 186 - Yersinia
pseudotuberculosis
Length = 217
Score = 34.3 bits (75), Expect = 2.5
Identities = 20/101 (19%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLI 171
++ +D E G+G ND + +S+++ G + D VKP + + T + GI E +
Sbjct: 45 YLILDTETTGLG---NDAEIIEISIIDCTGKILLDTLVKPLKAIPAEVTAIHGITNEMVA 101
Query: 172 NGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRN 212
+ + + + + + L+ ++ D ++F + N
Sbjct: 102 DAPTWRDIHYQFMTLTNDRTLLIYNALFDSRLIFQTAAANN 142
>UniRef50_Q8KQK8 Cluster: DNA polymerase III epsilon subunit; n=5;
Candidatus Tremblaya princeps|Rep: DNA polymerase III
epsilon subunit - Tremblaya princeps
Length = 212
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 145 YDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+ ++ PR+ + V G+R E L FS + + + + LVGH+L DLN L
Sbjct: 26 FHAYINPRQRMTRGAQAVHGLRDEFLATQPAFSAIAQRLLFFLCQSTLVGHNLSFDLNFL 85
>UniRef50_A7H3V7 Cluster: Putative site-specific recombinase, phage
integrase family; n=1; Campylobacter jejuni subsp.
doylei 269.97|Rep: Putative site-specific recombinase,
phage integrase family - Campylobacter jejuni subsp.
doylei 269.97
Length = 399
Score = 34.3 bits (75), Expect = 2.5
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 76 TVRKFETLNLEP--DQADGHEDDIALNDRKQAKNKIT-KFIAMD-CEMVGIGYDGNDHML 131
T+ ++ TLNL Q D + ++A ND + K++IT K +A++ E+ + +
Sbjct: 53 TLGEYPTLNLANARKQRDNLKVNLAENDSIREKSEITFKELALEKMELKKLELSEKTYK- 111
Query: 132 ARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGED--FSIVQKEVADVIRG 189
+ VS + +F IY + + + ++KD RKE++ G D F+++ + +
Sbjct: 112 SYVSYLQRFAFGIYGEIILDKLQIKDILKSFEKFRKENIREGADKFFTLLNEIFRHGVIK 171
Query: 190 KILVGHSLKN-DLNVLFLSHPKRNIRTHLSTNHSK 223
+ + + + N + L ++ +N T L T K
Sbjct: 172 EYIKSNPMANLNRKELLINKASKNHATLLETKEIK 206
>UniRef50_A4C086 Cluster: DNA polymerase III subunit; n=2;
Polaribacter|Rep: DNA polymerase III subunit -
Polaribacter irgensii 23-P
Length = 361
Score = 34.3 bits (75), Expect = 2.5
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 112 FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF---VKPREEVKDYRTIVSGIRKE 168
+ +D E G + N+ + +++ G + D+F V P +E++ + ++GI +
Sbjct: 2 YAILDIETTGGKF--NEEGITEIAIYKFDGHSVVDQFISLVNPEKEIQQFVVRLTGINNK 59
Query: 169 DLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
L + F + K + ++ + LV H+ D +L
Sbjct: 60 MLRSAPKFYEIAKRIIEITKDCTLVAHNTTFDYRIL 95
>UniRef50_Q7RID0 Cluster: RNB-like protein, putative; n=8; Plasmodium
(Vinckeia)|Rep: RNB-like protein, putative - Plasmodium
yoelii yoelii
Length = 2804
Score = 34.3 bits (75), Expect = 2.5
Identities = 31/154 (20%), Positives = 65/154 (42%), Gaps = 8/154 (5%)
Query: 3 ENSHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRK 62
EN + T H +T W++ + KE ++ K+ + ++ +K
Sbjct: 1104 ENEQGKNVTIEKKHKKTKEKGKKKKKEWKRKRKEDXKKKKKESREEKKKIKKEQMKKEKK 1163
Query: 63 TEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGI 122
E+K K + + V ET + ++ + D+ L +K+ K K +K + + I
Sbjct: 1164 KEKK--KEESAKEKVDN-ETEEIAKEKGYHTQSDV-LXKKKKKKKKXSKDKLKNSDYSFI 1219
Query: 123 GYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVK 156
N+ + L+N+ CIYD+++ + +K
Sbjct: 1220 DVGSNEE---KTKLLNR-QMCIYDEYITQEKAIK 1249
>UniRef50_A7TJ26 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1168
Score = 34.3 bits (75), Expect = 2.5
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLV-----NKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
+DC+ + LARVS++ + +G D ++ + ++DY T SGI D
Sbjct: 970 IDCKGIKTIIRPKKTALARVSVLRGEEGDLYGVPFIDDYIVQTDHIQDYVTKYSGINPGD 1029
Query: 170 LI-NGEDFSIVQKEVAD------VIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
L ++V + VA + G + VGH L ND + ++ P+ IR
Sbjct: 1030 LDPKNSSKALVTRTVAYRKIWLLMQLGCVFVGHGLSNDFKQININVPQEQIR 1081
>UniRef50_A4QWG5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 701
Score = 34.3 bits (75), Expect = 2.5
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 30/124 (24%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVN-KFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLI 171
+ DCEM GY + R + + G+ + D V+P EV D + SG+ EDL
Sbjct: 486 VCFDCEM---GYTVKGFEMIRFTATSWPSGEELMDVLVRPFGEVLDLNSQYSGVWPEDLA 542
Query: 172 NGEDFSIV-------QK-------------EVA-DVI-----RGKILVGHSLKNDLNVLF 205
N F++ QK EVA D++ R L+GH L+NDLN +
Sbjct: 543 NARPFALASDKPLPPQKAGERKRLQMVSSPEVARDLLFSLISRDTPLMGHGLENDLNCMR 602
Query: 206 LSHP 209
+ HP
Sbjct: 603 VVHP 606
>UniRef50_UPI00006CB9FB Cluster: hypothetical protein
TTHERM_00557990; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00557990 - Tetrahymena
thermophila SB210
Length = 912
Score = 33.9 bits (74), Expect = 3.3
Identities = 20/91 (21%), Positives = 38/91 (41%)
Query: 6 HKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQ 65
HK + SD HNQ + LRG Q + + ++ ++ Y N +
Sbjct: 33 HKYQNFISDQHNQVLGLRGARAKKIQNIYKLQYVQQQNRVNRSGEKDYLLMSVGNNQFNL 92
Query: 66 KINKSKDLQPTVRKFETLNLEPDQADGHEDD 96
N + Q +V K+ T ++ P++ + +D
Sbjct: 93 TNNNEEFEQSSVMKYNTHDITPERGNSLMND 123
>UniRef50_A7LUS3 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 854
Score = 33.9 bits (74), Expect = 3.3
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 122 IGYDGNDHMLARVSLVNKFGDCIYD------KFVKPREEVKDYRTIVSGIRKEDLINGED 175
+GYDG D + ++LV K IYD + P KD ++G ED+I G++
Sbjct: 413 VGYDGVDKRIDELALVIKHEGTIYDLMKVEQAYAPPFSSAKD-PVALAGYVAEDIITGKN 471
Query: 176 FSIVQKEVADV 186
+ +E+ D+
Sbjct: 472 NPVYWRELRDI 482
>UniRef50_A0Y7J9 Cluster: Putative exonuclease; n=1; marine gamma
proteobacterium HTCC2143|Rep: Putative exonuclease -
marine gamma proteobacterium HTCC2143
Length = 255
Score = 33.9 bits (74), Expect = 3.3
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+ +D E G+ L + +++ G+ + ++ VKP +V V GI+ DL +
Sbjct: 43 VILDTETTGLSETAQ---LIEICILDFEGNILLNERVKPSVKVSKGAREVHGIKARDLKS 99
Query: 173 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
+ V ++ +V GK +V ++ K D ++
Sbjct: 100 CRSWPDVYRDYVEVTAGKNIVAYNAKFDRRII 131
>UniRef50_Q7RLR0 Cluster: Erythrocyte binding protein homolog; n=4;
Plasmodium|Rep: Erythrocyte binding protein homolog -
Plasmodium yoelii yoelii
Length = 497
Score = 33.9 bits (74), Expect = 3.3
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 4 NSHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKT 63
N ++RK A D N+ + IN +LL +D KE+ A ++ K R + K
Sbjct: 98 NVYERKYXA--DENKLNKIFENINEVNIQLLKDIKNIDDKEK--AINKKVIEKVREDIKK 153
Query: 64 EQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALND--RKQAKNKITKFIAM 115
Q+ N+ D++ + K E N + DG ED+ N + KN++ K + M
Sbjct: 154 YQETNEIMDIKGNIVKSEVSNKHKGKEDGQEDNNFTNSDMDEDEKNEVLKKLYM 207
>UniRef50_Q4YSX4 Cluster: Putative uncharacterized protein; n=10;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 2411
Score = 33.9 bits (74), Expect = 3.3
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 40 MDHKEEKQAPK--EQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQA----DGH 93
MD +EK+ + E Y K NR TE K+N+ D++ TVR E + D+A + H
Sbjct: 895 MDASKEKKIDEFLEIYDKKSGLNRYTESKMNEFLDIRDTVRSIEEAE-KIDKAKKFFENH 953
Query: 94 EDDIALNDRKQAKNKIT-----KFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKF 148
+ I +++ N ++ K I + + Y N L + L+ +G+ YD
Sbjct: 954 DKIIDIHESLSVNNLLSTYDHIKDIEENKDQSAYKYKNNIEDLNKNELLEYWGNYHYD-- 1011
Query: 149 VKPREEVKDYRTIVSGIRKEDLIN 172
V ++ K + + KE IN
Sbjct: 1012 VIKKDTPKHNNSFIYASGKEAKIN 1035
>UniRef50_Q4XDT9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 749
Score = 33.9 bits (74), Expect = 3.3
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 78 RKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLV 137
+KFE NLE + + + L D+ +K + +D I DG ++++
Sbjct: 592 KKFEIKNLEDEDSYDEIYEEELTDKNGSKKETESMYCIDTNNCTIINDGTYFCEDVLNII 651
Query: 138 NKF-GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIR 188
N + + I D +K E ++ I I + D +N I+++++ + I+
Sbjct: 652 NNYPKNEINDNIIKQSEYNNMFKDIEKLIYRRDFLNLNIIKIIREKIIESIK 703
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,283,667
Number of Sequences: 1657284
Number of extensions: 10117122
Number of successful extensions: 34055
Number of sequences better than 10.0: 345
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 33684
Number of HSP's gapped (non-prelim): 416
length of query: 224
length of database: 575,637,011
effective HSP length: 98
effective length of query: 126
effective length of database: 413,223,179
effective search space: 52066120554
effective search space used: 52066120554
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 70 (32.3 bits)
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