Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001829-TA|BGIBMGA001829-PA|IPR006055|Exonuclease,
IPR013520|Exonuclease, RNase T and DNA polymerase III,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
(224 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4... 153 5e-37
AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease ... 153 5e-37
AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens ... 153 5e-37
AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein. 153 5e-37
AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein. 153 5e-37
AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease ... 133 4e-31
BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein. 101 2e-21
AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated e... 101 2e-21
AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens ... 101 2e-21
BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated e... 99 6e-21
BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein. 99 6e-21
AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein SB... 99 6e-21
X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein. 94 3e-19
U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein. 94 3e-19
CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein. 94 3e-19
BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated g... 94 3e-19
BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated e... 94 3e-19
BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein. 87 5e-17
AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens ... 87 5e-17
BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein. 72 1e-12
AL158826-18|CAI12845.1| 189|Homo sapiens REX4, RNA exonuclease ... 69 1e-11
AL158826-20|CAI12847.1| 233|Homo sapiens REX4, RNA exonuclease ... 63 7e-10
BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein. 58 3e-08
BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp prot... 58 3e-08
AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens ... 58 3e-08
AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp prot... 58 3e-08
BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1... 57 4e-08
AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein. 57 4e-08
AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product pr... 55 2e-07
BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein. 54 3e-07
BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein. 54 3e-07
AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein. 54 3e-07
AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein FL... 34 0.35
BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific pept... 32 1.4
AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT POLY(A)... 32 1.4
AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein. 32 1.4
BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein. 32 1.9
AF121141-1|AAD17298.1| 2099|Homo sapiens endocrine regulator pro... 31 4.3
AF090114-1|AAD47387.1| 2099|Homo sapiens unknown protein. 31 4.3
BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 5.7
BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 5.7
AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein. 30 5.7
AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 5.7
AL590383-2|CAH71374.1| 2099|Homo sapiens zinc finger protein 318... 30 5.7
AL583834-1|CAI14459.1| 2099|Homo sapiens zinc finger protein 318... 30 5.7
AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 5.7
AF528529-1|AAM94279.1| 502|Homo sapiens hypothetical protein pr... 30 5.7
AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein. 30 5.7
AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense t... 30 5.7
AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein. 30 5.7
>BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 153 bits (371), Expect = 5e-37
Identities = 71/135 (52%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Query: 81 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 139
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 140 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 199
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 200 DLNVLFLSHPKRNIR 214
DL VLFL HPK+ IR
Sbjct: 331 DLKVLFLDHPKKKIR 345
>AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 153 bits (371), Expect = 5e-37
Identities = 71/135 (52%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Query: 81 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 139
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 140 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 199
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 200 DLNVLFLSHPKRNIR 214
DL VLFL HPK+ IR
Sbjct: 331 DLKVLFLDHPKKKIR 345
>AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21840 fis, clone HEP01804. ).
Length = 422
Score = 153 bits (371), Expect = 5e-37
Identities = 71/135 (52%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Query: 81 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 139
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 140 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 199
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 200 DLNVLFLSHPKRNIR 214
DL VLFL HPK+ IR
Sbjct: 331 DLKVLFLDHPKKKIR 345
>AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein.
Length = 422
Score = 153 bits (371), Expect = 5e-37
Identities = 71/135 (52%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Query: 81 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 139
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 140 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 199
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 200 DLNVLFLSHPKRNIR 214
DL VLFL HPK+ IR
Sbjct: 331 DLKVLFLDHPKKKIR 345
>AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein.
Length = 422
Score = 153 bits (371), Expect = 5e-37
Identities = 71/135 (52%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Query: 81 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 139
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 140 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 199
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 200 DLNVLFLSHPKRNIR 214
DL VLFL HPK+ IR
Sbjct: 331 DLKVLFLDHPKKKIR 345
>AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 374
Score = 133 bits (322), Expect = 4e-31
Identities = 62/122 (50%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 81 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 139
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 196 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 255
Query: 140 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 199
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 256 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 315
Query: 200 DL 201
DL
Sbjct: 316 DL 317
>BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein.
Length = 353
Score = 101 bits (242), Expect = 2e-21
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 5 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 59
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 60 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 118
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 119 MVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI 178
MVG G G+ LAR S+VN GD +YD+++ P + DYRT SGIRK+ ++N F I
Sbjct: 186 MVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKI 245
Query: 179 VQKEVADVIRGKILVGHSLKNDLNVLFLSHPK 210
+ ++ ++ GKI+VGH++ ND L HPK
Sbjct: 246 ARGQILKILTGKIVVGHAIHNDFKALQYFHPK 277
>AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated
exonuclease gene 20kDa-liker), member 1 (antiporter,
Na+/ protein.
Length = 353
Score = 101 bits (242), Expect = 2e-21
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 5 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 59
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 60 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 118
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 119 MVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI 178
MVG G G+ LAR S+VN GD +YD+++ P + DYRT SGIRK+ ++N F I
Sbjct: 186 MVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKI 245
Query: 179 VQKEVADVIRGKILVGHSLKNDLNVLFLSHPK 210
+ ++ ++ GKI+VGH++ ND L HPK
Sbjct: 246 ARGQILKILTGKIVVGHAIHNDFKALQYFHPK 277
>AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ12671 fis, clone NT2RM4002323, weakly similar to
ANTIGEN GOR. ).
Length = 353
Score = 101 bits (242), Expect = 2e-21
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 5 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 59
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 60 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 118
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 119 MVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI 178
MVG G G+ LAR S+VN GD +YD+++ P + DYRT SGIRK+ ++N F I
Sbjct: 186 MVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKI 245
Query: 179 VQKEVADVIRGKILVGHSLKNDLNVLFLSHPK 210
+ ++ ++ GKI+VGH++ ND L HPK
Sbjct: 246 ARGQILKILTGKIVVGHAIHNDFKALQYFHPK 277
>BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated
exonuclease gene 20kDa-like 1 protein.
Length = 325
Score = 99 bits (238), Expect = 6e-21
Identities = 44/105 (41%), Positives = 66/105 (62%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
+K +A+DCEMVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQH 167
Query: 170 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ F + QKE+ +++GK++VGH+L ND L HP+ R
Sbjct: 168 MRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTR 212
>BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein.
Length = 327
Score = 99 bits (238), Expect = 6e-21
Identities = 44/105 (41%), Positives = 66/105 (62%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
+K +A+DCEMVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQH 167
Query: 170 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ F + QKE+ +++GK++VGH+L ND L HP+ R
Sbjct: 168 MRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTR 212
>AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein
SBBI58 protein.
Length = 325
Score = 99 bits (238), Expect = 6e-21
Identities = 44/105 (41%), Positives = 66/105 (62%)
Query: 110 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 169
+K +A+DCEMVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQH 167
Query: 170 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
+ F + QKE+ +++GK++VGH+L ND L HP+ R
Sbjct: 168 MRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTR 212
>X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein.
Length = 181
Score = 94.3 bits (224), Expect = 3e-19
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 173 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
F++ + E+ +++GK++VGH LK+D L
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQAL 98
>U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein.
Length = 181
Score = 94.3 bits (224), Expect = 3e-19
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 173 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
F++ + E+ +++GK++VGH LK+D L
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQAL 98
>CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein.
Length = 181
Score = 94.3 bits (224), Expect = 3e-19
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 173 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
F++ + E+ +++GK++VGH LK+D L
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQAL 98
>BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated gene
20kDa protein.
Length = 181
Score = 94.3 bits (224), Expect = 3e-19
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 173 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
F++ + E+ +++GK++VGH LK+D L
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQAL 98
>BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated
exonuclease gene 20kDa protein.
Length = 181
Score = 94.3 bits (224), Expect = 3e-19
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 173 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVL 204
F++ + E+ +++GK++VGH LK+D L
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQAL 98
>BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein.
Length = 209
Score = 87.0 bits (206), Expect = 5e-17
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 119 MVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI 178
MVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++ + F +
Sbjct: 1 MVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQV 60
Query: 179 VQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
QKE+ +++GK++VGH+L ND L HP+ R
Sbjct: 61 AQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTR 96
>AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12484 fis, clone NT2RM1001102, weakly similar to
Human HEM45 mRNA. ).
Length = 209
Score = 87.0 bits (206), Expect = 5e-17
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 119 MVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI 178
MVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++ + F +
Sbjct: 1 MVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQV 60
Query: 179 VQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
QKE+ +++GK++VGH+L ND L HP+ R
Sbjct: 61 AQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTR 96
>BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein.
Length = 87
Score = 72.1 bits (169), Expect = 1e-12
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 113 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 172
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 173 GEDFSIVQKEV 183
F++ + EV
Sbjct: 67 ATPFAVARLEV 77
>AL158826-18|CAI12845.1| 189|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 189
Score = 68.9 bits (161), Expect = 1e-11
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 81 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 139
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 118 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 177
Query: 140 FGDCIYDKFVKP 151
+G C+YDK+VKP
Sbjct: 178 YGKCVYDKYVKP 189
>AL158826-20|CAI12847.1| 233|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 233
Score = 63.3 bits (147), Expect = 7e-10
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 174 EDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
E+ +VQKEVA++++G+ILVGH+L NDL VLFL HPK+ IR
Sbjct: 133 EELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIR 173
>BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein.
Length = 774
Score = 57.6 bits (133), Expect = 3e-08
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 174
+DCEM + G + L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPV 286
Query: 175 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+ VQ+++ ++ +LVGHSL DL L + HP
Sbjct: 287 TTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP 324
>BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 57.6 bits (133), Expect = 3e-08
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 174
+DCEM + G + L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPV 286
Query: 175 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+ VQ+++ ++ +LVGHSL DL L + HP
Sbjct: 287 TTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP 324
>AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens
cDNA FLJ32692 fis, clone TESTI2000238. ).
Length = 443
Score = 57.6 bits (133), Expect = 3e-08
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 174
+DCEM + G + L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPV 286
Query: 175 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+ VQ+++ ++ +LVGHSL DL L + HP
Sbjct: 287 TTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP 324
>AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 57.6 bits (133), Expect = 3e-08
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 174
+DCEM + G + L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPV 286
Query: 175 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+ VQ+++ ++ +LVGHSL DL L + HP
Sbjct: 287 TTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP 324
>BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1
homolog (S. cerevisiae) protein.
Length = 1221
Score = 57.2 bits (132), Expect = 4e-08
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y L RV++V+ +YD FVKP E+ DY T SG+ + DL
Sbjct: 1062 ALDCEM---SYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADL--- 1115
Query: 174 EDFSIVQKEVADVI-----RGKILVGHSLKNDLNVLFLSH 208
D S+ ++V V+ IL+GHSL++DL L + H
Sbjct: 1116 ADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIH 1155
>AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein.
Length = 1239
Score = 57.2 bits (132), Expect = 4e-08
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y L RV++V+ +YD FVKP E+ DY T SG+ + DL
Sbjct: 1080 ALDCEM---SYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADL--- 1133
Query: 174 EDFSIVQKEVADVI-----RGKILVGHSLKNDLNVLFLSH 208
D S+ ++V V+ IL+GHSL++DL L + H
Sbjct: 1134 ADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIH 1173
>AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product
protein.
Length = 547
Score = 54.8 bits (126), Expect = 2e-07
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 131 LARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI--VQKEVADVI- 187
L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N + VQ+++ ++
Sbjct: 155 LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPVTTKLKDVQRQLKALLP 213
Query: 188 RGKILVGHSLKNDLNVLFLSHP 209
+LVGHSL DL L + HP
Sbjct: 214 PDAVLVGHSLDLDLRALKMIHP 235
>BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein.
Length = 318
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + L RV++V+ +YD FVKP E+ DY T SG+ + D+
Sbjct: 146 ALDCEMC---YTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKT 202
Query: 174 E-DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
VQ + + IL+GHSL++DL L L H
Sbjct: 203 SITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIH 239
>BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein.
Length = 347
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + L RV++V+ +YD FVKP E+ DY T SG+ + D+
Sbjct: 175 ALDCEMC---YTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKT 231
Query: 174 E-DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
VQ + + IL+GHSL++DL L L H
Sbjct: 232 SITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIH 268
>AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein.
Length = 318
Score = 54.4 bits (125), Expect = 3e-07
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + L RV++V+ +YD FVKP E+ DY T SG+ + D+
Sbjct: 146 ALDCEMC---YTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKT 202
Query: 174 E-DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
VQ + + IL+GHSL++DL L L H
Sbjct: 203 SITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIH 239
>AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein
FLJ12484 variant protein.
Length = 188
Score = 34.3 bits (75), Expect = 0.35
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 182 EVADVIRGKILVGHSLKNDLNVLFLSHPKRNIR 214
++ +++GK++VGH+L ND L HP+ R
Sbjct: 43 QILKLLKGKVVVGHALHNDFQALKYVHPRSQTR 75
>BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific peptidase
52 protein.
Length = 1198
Score = 32.3 bits (70), Expect = 1.4
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 146 DKFVKPREEVKDYRTIVSGIRKEDL---INGEDFSIVQKEVAD----VIRGKILVGHSLK 198
D ++ +E+V DY T SGI+ DL I+ + + ++ + G VGH L+
Sbjct: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
Query: 199 NDLNVLFLSHPKRNIRTHLSTNHSKR 224
D V+ L PK + + H R
Sbjct: 1082 KDFRVINLMVPKDQVLDTVYLFHMPR 1107
>AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN2 protein.
Length = 1198
Score = 32.3 bits (70), Expect = 1.4
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 146 DKFVKPREEVKDYRTIVSGIRKEDL---INGEDFSIVQKEVAD----VIRGKILVGHSLK 198
D ++ +E+V DY T SGI+ DL I+ + + ++ + G VGH L+
Sbjct: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
Query: 199 NDLNVLFLSHPKRNIRTHLSTNHSKR 224
D V+ L PK + + H R
Sbjct: 1082 KDFRVINLMVPKDQVLDTVYLFHMPR 1107
>AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein.
Length = 1206
Score = 32.3 bits (70), Expect = 1.4
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 146 DKFVKPREEVKDYRTIVSGIRKEDL---INGEDFSIVQKEVAD----VIRGKILVGHSLK 198
D ++ +E+V DY T SGI+ DL I+ + + ++ + G VGH L+
Sbjct: 1030 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1089
Query: 199 NDLNVLFLSHPKRNIRTHLSTNHSKR 224
D V+ L PK + + H R
Sbjct: 1090 KDFRVINLMVPKDQVLDTVYLFHMPR 1115
>BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein.
Length = 1202
Score = 31.9 bits (69), Expect = 1.9
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 146 DKFVKPREEVKDYRTIVSGIRKEDL---INGEDFSIVQKEVAD----VIRGKILVGHSLK 198
D ++ +E+V DY T SGI+ DL I+ + + ++ + G VGH L+
Sbjct: 1026 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1085
Query: 199 NDLNVLFLSHPKRNIRTHLSTNHSKR 224
D V+ L PK + + H R
Sbjct: 1086 KDFRVVNLMVPKDQVLDTVYLFHMPR 1111
>AF121141-1|AAD17298.1| 2099|Homo sapiens endocrine regulator protein.
Length = 2099
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 36 SNLLMDHKEE--KQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADG 92
+ + + KEE K++P GKF +K E++ KS + P++ K E L D+ DG
Sbjct: 1073 TGIKLQFKEEVKKESPTSSSFGKFSW-KKPEKEEEKSSLVTPSISKEEILESSKDKEDG 1130
>AF090114-1|AAD47387.1| 2099|Homo sapiens unknown protein.
Length = 2099
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 36 SNLLMDHKEE--KQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADG 92
+ + + KEE K++P GKF +K E++ KS + P++ K E L D+ DG
Sbjct: 1073 TGIKLQFKEEVKKESPTSSSFGKFSW-KKPEKEEEKSSLVTPSISKEEILESSKDKEDG 1130
>BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 43 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 102
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 103 KQAKNK 108
+QAK +
Sbjct: 107 EQAKRQ 112
>BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 43 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 102
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 103 KQAKNK 108
+QAK +
Sbjct: 107 EQAKRQ 112
>AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 43 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 102
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 103 KQAKNK 108
+QAK +
Sbjct: 107 EQAKRQ 112
>AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 43 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 102
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 103 KQAKNK 108
+QAK +
Sbjct: 107 EQAKRQ 112
>AL590383-2|CAH71374.1| 2099|Homo sapiens zinc finger protein 318
protein.
Length = 2099
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 38 LLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADG 92
L + + +K++P GKF +K E++ KS + P++ K E L D+ DG
Sbjct: 1077 LQLKEEVKKESPTSSSFGKFSW-KKPEKEEEKSSLVTPSISKEEILESSKDKEDG 1130
>AL583834-1|CAI14459.1| 2099|Homo sapiens zinc finger protein 318
protein.
Length = 2099
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 38 LLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADG 92
L + + +K++P GKF +K E++ KS + P++ K E L D+ DG
Sbjct: 1077 LQLKEEVKKESPTSSSFGKFSW-KKPEKEEEKSSLVTPSISKEEILESSKDKEDG 1130
>AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 43 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 102
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 103 KQAKNK 108
+QAK +
Sbjct: 107 EQAKRQ 112
>AF528529-1|AAM94279.1| 502|Homo sapiens hypothetical protein
protein.
Length = 502
Score = 30.3 bits (65), Expect = 5.7
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 36 SNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHED 95
+NL++ +K+ +Q EQ K + K E+K + ++ + K E + D + ED
Sbjct: 298 NNLILLNKDVQQESSEQ---KNKSTDKGEKKPDSNEKGERKKEKKEKTEKKFDHSKKSED 354
Query: 96 DIALNDRKQAKNKITKFIAMDCE 118
+ D KQAK K + + + E
Sbjct: 355 TQKVKDEKQAKEKEVESLKLPSE 377
>AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 43 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 102
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 103 KQAKNK 108
+QAK +
Sbjct: 107 EQAKRQ 112
>AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense
transcripts 2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 43 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 102
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 103 KQAKNK 108
+QAK +
Sbjct: 107 EQAKRQ 112
>AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein.
Length = 1298
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 43 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 102
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 73 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 132
Query: 103 KQAKNK 108
+QAK +
Sbjct: 133 EQAKRQ 138
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,169,553
Number of Sequences: 224733
Number of extensions: 1172877
Number of successful extensions: 3287
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3228
Number of HSP's gapped (non-prelim): 51
length of query: 224
length of database: 73,234,838
effective HSP length: 87
effective length of query: 137
effective length of database: 53,683,067
effective search space: 7354580179
effective search space used: 7354580179
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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