Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001829-TA|BGIBMGA001829-PA|IPR006055|Exonuclease,
IPR013520|Exonuclease, RNase T and DNA polymerase III,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
(224 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060760-1|AAL28308.1| 290|Drosophila melanogaster GH21710p pro... 141 8e-34
AE014296-2352|AAF49764.1| 290|Drosophila melanogaster CG6833-PA... 141 8e-34
AY069617-1|AAL39762.1| 787|Drosophila melanogaster LD38414p pro... 67 2e-11
AY052100-1|AAK93524.1| 757|Drosophila melanogaster SD04906p pro... 67 2e-11
AL024456-1|CAA19660.1| 515|Drosophila melanogaster EG:131F2.2 p... 67 2e-11
AE014298-264|AAN09060.1| 742|Drosophila melanogaster CG14801-PD... 67 2e-11
AE014298-263|AAF45671.2| 761|Drosophila melanogaster CG14801-PC... 67 2e-11
AE014298-262|AAF45670.2| 761|Drosophila melanogaster CG14801-PA... 67 2e-11
AE014298-261|AAF45669.2| 787|Drosophila melanogaster CG14801-PB... 67 2e-11
BT023775-1|AAZ41783.1| 681|Drosophila melanogaster LD29573p pro... 61 1e-09
AE014296-1132|AAN12085.1| 681|Drosophila melanogaster CG8368-PB... 61 1e-09
AE014296-1131|AAF50654.1| 681|Drosophila melanogaster CG8368-PA... 61 1e-09
BT021282-1|AAX33430.1| 991|Drosophila melanogaster RE36502p pro... 60 2e-09
BT001509-1|AAN71264.1| 746|Drosophila melanogaster LD40727p pro... 60 2e-09
BT001493-1|AAN71248.1| 864|Drosophila melanogaster LD30051p pro... 60 2e-09
AE014297-4177|ABC66193.1| 991|Drosophila melanogaster CG12877-P... 60 2e-09
AE014297-4178|AAN14129.1| 956|Drosophila melanogaster CG12877-P... 41 0.001
AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-P... 41 0.001
AY095049-1|AAM11377.1| 930|Drosophila melanogaster LD37466p pro... 38 0.015
AE013599-748|AAF59018.2| 1241|Drosophila melanogaster CG8232-PA ... 38 0.015
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro... 33 0.42
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,... 33 0.42
AE014296-325|AAZ66051.1| 849|Drosophila melanogaster CG7971-PD,... 33 0.42
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,... 33 0.42
AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA... 31 1.7
X75374-1|CAA53148.1| 1209|Drosophila melanogaster three rows pro... 30 2.2
U03276-1|AAB60210.1| 1209|Drosophila melanogaster THREE ROWS pro... 30 2.2
S69585-1|AAB29824.1| 1209|Drosophila melanogaster thr protein. 30 2.2
AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p pro... 30 3.0
AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-P... 30 3.0
AY061399-1|AAL28947.1| 242|Drosophila melanogaster LD32555p pro... 29 3.9
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 29 3.9
AE014297-893|AAF54349.1| 242|Drosophila melanogaster CG8436-PA ... 29 3.9
AY118455-1|AAM49824.1| 581|Drosophila melanogaster AT23067p pro... 29 5.2
AE014297-2303|AAN13730.1| 581|Drosophila melanogaster CG3983-PB... 29 5.2
AE014297-2302|AAF55384.3| 581|Drosophila melanogaster CG3983-PA... 29 5.2
AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC... 29 6.9
AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB... 29 6.9
AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA... 29 6.9
>AY060760-1|AAL28308.1| 290|Drosophila melanogaster GH21710p
protein.
Length = 290
Score = 141 bits (341), Expect = 8e-34
Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 102 RKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTI 161
R + K + +AMDCEMVG+G++ D MLARVS+VN+ G + DK+VKPR+EV DYRT
Sbjct: 107 RMKKKAHRNRILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTS 166
Query: 162 VSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
VSGIR +D+ NGEDF+ VQ EV +I G+ILVGH L+NDL VL + HP +IR T+H
Sbjct: 167 VSGIRPQDIANGEDFAAVQNEVMKLIHGRILVGHGLRNDLAVLGIRHPFHDIR---DTSH 223
Query: 222 SK 223
K
Sbjct: 224 YK 225
>AE014296-2352|AAF49764.1| 290|Drosophila melanogaster CG6833-PA
protein.
Length = 290
Score = 141 bits (341), Expect = 8e-34
Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 102 RKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTI 161
R + K + +AMDCEMVG+G++ D MLARVS+VN+ G + DK+VKPR+EV DYRT
Sbjct: 107 RMKKKAHRNRILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTS 166
Query: 162 VSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
VSGIR +D+ NGEDF+ VQ EV +I G+ILVGH L+NDL VL + HP +IR T+H
Sbjct: 167 VSGIRPQDIANGEDFAAVQNEVMKLIHGRILVGHGLRNDLAVLGIRHPFHDIR---DTSH 223
Query: 222 SK 223
K
Sbjct: 224 YK 225
>AY069617-1|AAL39762.1| 787|Drosophila melanogaster LD38414p
protein.
Length = 787
Score = 67.3 bits (157), Expect = 2e-11
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y G + +VSLV G +Y+ FV+P ++ DY T SGI + DL +G
Sbjct: 622 ALDCEM---SYTGRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSG 678
Query: 174 -EDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+ + VQ+++ +I IL+GH L+NDL L L H I T +S H
Sbjct: 679 AKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVH-NTLIDTSISFPH 727
>AY052100-1|AAK93524.1| 757|Drosophila melanogaster SD04906p
protein.
Length = 757
Score = 67.3 bits (157), Expect = 2e-11
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y G + +VSLV G +Y+ FV+P ++ DY T SGI + DL +G
Sbjct: 592 ALDCEM---SYTGRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSG 648
Query: 174 -EDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+ + VQ+++ +I IL+GH L+NDL L L H I T +S H
Sbjct: 649 AKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVH-NTLIDTSISFPH 697
>AL024456-1|CAA19660.1| 515|Drosophila melanogaster EG:131F2.2
protein.
Length = 515
Score = 67.3 bits (157), Expect = 2e-11
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y G + +VSLV G +Y+ FV+P ++ DY T SGI + DL +G
Sbjct: 350 ALDCEM---SYTGRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSG 406
Query: 174 -EDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+ + VQ+++ +I IL+GH L+NDL L L H I T +S H
Sbjct: 407 AKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVH-NTLIDTSISFPH 455
>AE014298-264|AAN09060.1| 742|Drosophila melanogaster CG14801-PD,
isoform D protein.
Length = 742
Score = 67.3 bits (157), Expect = 2e-11
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y G + +VSLV G +Y+ FV+P ++ DY T SGI + DL +G
Sbjct: 577 ALDCEM---SYTGRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSG 633
Query: 174 -EDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+ + VQ+++ +I IL+GH L+NDL L L H I T +S H
Sbjct: 634 AKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVH-NTLIDTSISFPH 682
>AE014298-263|AAF45671.2| 761|Drosophila melanogaster CG14801-PC,
isoform C protein.
Length = 761
Score = 67.3 bits (157), Expect = 2e-11
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y G + +VSLV G +Y+ FV+P ++ DY T SGI + DL +G
Sbjct: 596 ALDCEM---SYTGRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSG 652
Query: 174 -EDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+ + VQ+++ +I IL+GH L+NDL L L H I T +S H
Sbjct: 653 AKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVH-NTLIDTSISFPH 701
>AE014298-262|AAF45670.2| 761|Drosophila melanogaster CG14801-PA,
isoform A protein.
Length = 761
Score = 67.3 bits (157), Expect = 2e-11
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y G + +VSLV G +Y+ FV+P ++ DY T SGI + DL +G
Sbjct: 596 ALDCEM---SYTGRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSG 652
Query: 174 -EDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+ + VQ+++ +I IL+GH L+NDL L L H I T +S H
Sbjct: 653 AKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVH-NTLIDTSISFPH 701
>AE014298-261|AAF45669.2| 787|Drosophila melanogaster CG14801-PB,
isoform B protein.
Length = 787
Score = 67.3 bits (157), Expect = 2e-11
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y G + +VSLV G +Y+ FV+P ++ DY T SGI + DL +G
Sbjct: 622 ALDCEM---SYTGRGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSG 678
Query: 174 -EDFSIVQKEVADVIRG-KILVGHSLKNDLNVLFLSHPKRNIRTHLSTNH 221
+ + VQ+++ +I IL+GH L+NDL L L H I T +S H
Sbjct: 679 AKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVH-NTLIDTSISFPH 727
>BT023775-1|AAZ41783.1| 681|Drosophila melanogaster LD29573p
protein.
Length = 681
Score = 60.9 bits (141), Expect = 1e-09
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN-G 173
+DCEM N+ L R+S+VN+ + +Y+ V P + DY T SGI E +
Sbjct: 359 VDCEMCHTEAGCNE--LTRISIVNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVT 416
Query: 174 EDFSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+ +VQKEV++++ ILVG SL +DLN + + HP
Sbjct: 417 KRLDVVQKEVSELLPPDAILVGQSLNSDLNAMKMMHP 453
>AE014296-1132|AAN12085.1| 681|Drosophila melanogaster CG8368-PB,
isoform B protein.
Length = 681
Score = 60.9 bits (141), Expect = 1e-09
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN-G 173
+DCEM N+ L R+S+VN+ + +Y+ V P + DY T SGI E +
Sbjct: 359 VDCEMCHTEAGCNE--LTRISIVNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVT 416
Query: 174 EDFSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+ +VQKEV++++ ILVG SL +DLN + + HP
Sbjct: 417 KRLDVVQKEVSELLPPDAILVGQSLNSDLNAMKMMHP 453
>AE014296-1131|AAF50654.1| 681|Drosophila melanogaster CG8368-PA,
isoform A protein.
Length = 681
Score = 60.9 bits (141), Expect = 1e-09
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 115 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN-G 173
+DCEM N+ L R+S+VN+ + +Y+ V P + DY T SGI E +
Sbjct: 359 VDCEMCHTEAGCNE--LTRISIVNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVT 416
Query: 174 EDFSIVQKEVADVI-RGKILVGHSLKNDLNVLFLSHP 209
+ +VQKEV++++ ILVG SL +DLN + + HP
Sbjct: 417 KRLDVVQKEVSELLPPDAILVGQSLNSDLNAMKMMHP 453
>BT021282-1|AAX33430.1| 991|Drosophila melanogaster RE36502p
protein.
Length = 991
Score = 60.1 bits (139), Expect = 2e-09
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + L RV++V+ G +YD VKP ++ DY T SGI E +++
Sbjct: 835 ALDCEMC---YTTHGIELTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGI-TEAMLSN 890
Query: 174 EDFSI--VQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
E +I VQ + + K +LVGHSL++DL L L H
Sbjct: 891 ETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIH 928
>BT001509-1|AAN71264.1| 746|Drosophila melanogaster LD40727p
protein.
Length = 746
Score = 60.1 bits (139), Expect = 2e-09
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + L RV++V+ G +YD VKP ++ DY T SGI E +++
Sbjct: 590 ALDCEMC---YTTHGIELTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGI-TEAMLSN 645
Query: 174 EDFSI--VQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
E +I VQ + + K +LVGHSL++DL L L H
Sbjct: 646 ETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIH 683
>BT001493-1|AAN71248.1| 864|Drosophila melanogaster LD30051p
protein.
Length = 864
Score = 60.1 bits (139), Expect = 2e-09
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + L RV++V+ G +YD VKP ++ DY T SGI E +++
Sbjct: 708 ALDCEMC---YTTHGIELTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGI-TEAMLSN 763
Query: 174 EDFSI--VQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
E +I VQ + + K +LVGHSL++DL L L H
Sbjct: 764 ETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIH 801
>AE014297-4177|ABC66193.1| 991|Drosophila melanogaster CG12877-PC,
isoform C protein.
Length = 991
Score = 60.1 bits (139), Expect = 2e-09
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 173
A+DCEM Y + L RV++V+ G +YD VKP ++ DY T SGI E +++
Sbjct: 835 ALDCEMC---YTTHGIELTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGI-TEAMLSN 890
Query: 174 EDFSI--VQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
E +I VQ + + K +LVGHSL++DL L L H
Sbjct: 891 ETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIH 928
>AE014297-4178|AAN14129.1| 956|Drosophila melanogaster CG12877-PB,
isoform B protein.
Length = 956
Score = 41.1 bits (92), Expect = 0.001
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 26/117 (22%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTI------------ 161
A+DCEM Y + L RV++V+ G +YD VKP ++ DY T
Sbjct: 781 ALDCEMC---YTTHGIELTRVTVVDINGRSVYDALVKPDNQIVDYNTTWVNVAFRLFRIN 837
Query: 162 -------VSGIRKEDLINGEDFSI--VQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
SGI E +++ E +I VQ + + K +LVGHSL++DL L L H
Sbjct: 838 LQYSDFSYSGI-TEAMLSNETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIH 893
>AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-PA,
isoform A protein.
Length = 1010
Score = 41.1 bits (92), Expect = 0.001
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 26/117 (22%)
Query: 114 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTI------------ 161
A+DCEM Y + L RV++V+ G +YD VKP ++ DY T
Sbjct: 835 ALDCEMC---YTTHGIELTRVTVVDINGRSVYDALVKPDNQIVDYNTTWVNVAFRLFRIN 891
Query: 162 -------VSGIRKEDLINGEDFSI--VQKEVADVIRGK-ILVGHSLKNDLNVLFLSH 208
SGI E +++ E +I VQ + + K +LVGHSL++DL L L H
Sbjct: 892 LQYSDFSYSGI-TEAMLSNETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIH 947
>AY095049-1|AAM11377.1| 930|Drosophila melanogaster LD37466p
protein.
Length = 930
Score = 37.5 bits (83), Expect = 0.015
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 129 HM-LARVSLVNKFGDC----IYDKFVKPREEVKDYRTIVSGIRKEDL--------INGED 175
HM +AR+S + G D ++ +E+V DY T SGI+ DL +
Sbjct: 754 HMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALK 813
Query: 176 FSIVQ-KEVADVIRGKILVGHSLKNDLNVLFLSHPKRNI 213
+S + K + DV G I VGH LKND V+ + P I
Sbjct: 814 YSYQKLKYLVDV--GVIFVGHGLKNDFRVINIYVPSEQI 850
>AE013599-748|AAF59018.2| 1241|Drosophila melanogaster CG8232-PA
protein.
Length = 1241
Score = 37.5 bits (83), Expect = 0.015
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 129 HM-LARVSLVNKFGDC----IYDKFVKPREEVKDYRTIVSGIRKEDL--------INGED 175
HM +AR+S + G D ++ +E+V DY T SGI+ DL +
Sbjct: 1065 HMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALK 1124
Query: 176 FSIVQ-KEVADVIRGKILVGHSLKNDLNVLFLSHPKRNI 213
+S + K + DV G I VGH LKND V+ + P I
Sbjct: 1125 YSYQKLKYLVDV--GVIFVGHGLKNDFRVINIYVPSEQI 1161
>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
protein.
Length = 1062
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 DHKEEKQAPKEQYTGKFRRNRKTEQKI---NKSKDLQPTVRKFETLNLEPDQADGHEDDI 97
D K+ K+ +E R+ +K +K +KSK + RK + D+ EDD
Sbjct: 225 DKKKRKKRARESSASPERKKKKKSKKHKKESKSKKKKSRKRKHSESGRDSDRDSDEEDDS 284
Query: 98 ALNDRKQAKN 107
+ +R+++KN
Sbjct: 285 SEEERRESKN 294
>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
isoform A protein.
Length = 1062
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 DHKEEKQAPKEQYTGKFRRNRKTEQKI---NKSKDLQPTVRKFETLNLEPDQADGHEDDI 97
D K+ K+ +E R+ +K +K +KSK + RK + D+ EDD
Sbjct: 225 DKKKRKKRARESSASPERKKKKKSKKHKKESKSKKKRSRKRKHSESGRDSDRDSDEEDDS 284
Query: 98 ALNDRKQAKN 107
+ +R+++KN
Sbjct: 285 SEEERRESKN 294
>AE014296-325|AAZ66051.1| 849|Drosophila melanogaster CG7971-PD,
isoform D protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 DHKEEKQAPKEQYTGKFRRNRKTEQKI---NKSKDLQPTVRKFETLNLEPDQADGHEDDI 97
D K+ K+ +E R+ +K +K +KSK + RK + D+ EDD
Sbjct: 225 DKKKRKKRARESSASPERKKKKKSKKHKKESKSKKKRSRKRKHSESGRDSDRDSDEEDDS 284
Query: 98 ALNDRKQAKN 107
+ +R+++KN
Sbjct: 285 SEEERRESKN 294
>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
isoform C protein.
Length = 1107
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 DHKEEKQAPKEQYTGKFRRNRKTEQKI---NKSKDLQPTVRKFETLNLEPDQADGHEDDI 97
D K+ K+ +E R+ +K +K +KSK + RK + D+ EDD
Sbjct: 225 DKKKRKKRARESSASPERKKKKKSKKHKKESKSKKKRSRKRKHSESGRDSDRDSDEEDDS 284
Query: 98 ALNDRKQAKN 107
+ +R+++KN
Sbjct: 285 SEEERRESKN 294
>AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA
protein.
Length = 1978
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 17 NQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKD---L 73
NQ V + N + A M ++ + + GK ++E + + S +
Sbjct: 1186 NQAVQTADAVEDNRRDSRAELQKMQETLQEANQRIEILGKQLEASRSESRESASPQGGVV 1245
Query: 74 QPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIA 114
+ T+ F TL LE DQ+ D+ +R Q++ ++K +A
Sbjct: 1246 EKTILSFHTLLLEKDQSIQKYQDLLQTERDQSQQALSKQVA 1286
>X75374-1|CAA53148.1| 1209|Drosophila melanogaster three rows protein
protein.
Length = 1209
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 32 KLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQA 90
K+L L+ +H E + K TG + T K+ +S P R +E L L P A
Sbjct: 1024 KILRRALVFNHSPEDK--KRTATGSVSAVKNTASKVKQSAKKAPRFRIYEELELRPPSA 1080
>U03276-1|AAB60210.1| 1209|Drosophila melanogaster THREE ROWS protein.
Length = 1209
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 32 KLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQA 90
K+L L+ +H E + K TG + T K+ +S P R +E L L P A
Sbjct: 1024 KILRRALVFNHSPEDK--KRTATGSVSAVKNTASKVKQSAKKAPRFRIYEELELRPPSA 1080
>S69585-1|AAB29824.1| 1209|Drosophila melanogaster thr protein.
Length = 1209
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 32 KLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQA 90
K+L L+ +H E + K TG + T K+ +S P R +E L L P A
Sbjct: 1024 KILRRALVFNHSPEDK--KRTATGSVSAVKNTASKVKQSAKKAPRFRIYEELELRPPSA 1080
>AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p
protein.
Length = 359
Score = 29.9 bits (64), Expect = 3.0
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 24 GLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETL 83
GL+ + K +++ + +E+K A K+ K R ++ + I K+ Q + +
Sbjct: 65 GLVTLDEMKAKQEDIVRE-REKKLAQKKDE--KDREKQRALEAIQAEKNKQKRQIQALSF 121
Query: 84 NLEPDQADGHEDDIALNDRKQAKNK 108
NL+ D+ + EDD +D+KQ K K
Sbjct: 122 NLDDDEEEEEEDD-EDHDKKQLKIK 145
>AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-PA
protein.
Length = 359
Score = 29.9 bits (64), Expect = 3.0
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 24 GLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETL 83
GL+ + K +++ + +E+K A K+ K R ++ + I K+ Q + +
Sbjct: 65 GLVTLDEMKAKQEDIVRE-REKKLAQKKDE--KDREKQRALEAIQAEKNKQKRQIQALSF 121
Query: 84 NLEPDQADGHEDDIALNDRKQAKNK 108
NL+ D+ + EDD +D+KQ K K
Sbjct: 122 NLDDDEEEEEEDD-EDHDKKQLKIK 145
>AY061399-1|AAL28947.1| 242|Drosophila melanogaster LD32555p
protein.
Length = 242
Score = 29.5 bits (63), Expect = 3.9
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 24 GLINANWQKLLASNL--LMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFE 81
GL NAN K + + ++D +E +APKEQ K R RK +K+ K+++ +FE
Sbjct: 87 GLDNANEGKEIIVKIQQILDDADEAEAPKEQPRVK-REIRK--RKLTKTEESGEQNLEFE 143
Query: 82 TLNLE 86
N+E
Sbjct: 144 ISNVE 148
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 42 HK-EEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKF-ETLNLEPDQADGHEDDIAL 99
HK EE ++ ++ TG+ + + KI + + QP ++K T LE D+ + E +++
Sbjct: 1037 HKSEEPESNTKETTGETEASDSNDSKIGEKETEQPRIKKLPSTAELE-DRFNALERKMSV 1095
Query: 100 NDRKQAKNK 108
+KNK
Sbjct: 1096 QKSSPSKNK 1104
>AE014297-893|AAF54349.1| 242|Drosophila melanogaster CG8436-PA
protein.
Length = 242
Score = 29.5 bits (63), Expect = 3.9
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 24 GLINANWQKLLASNL--LMDHKEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFE 81
GL NAN K + + ++D +E +APKEQ K R RK +K+ K+++ +FE
Sbjct: 87 GLDNANEGKEIIVKIQQILDDADEAEAPKEQPRVK-REIRK--RKLTKTEESGEQNLEFE 143
Query: 82 TLNLE 86
N+E
Sbjct: 144 ISNVE 148
>AY118455-1|AAM49824.1| 581|Drosophila melanogaster AT23067p
protein.
Length = 581
Score = 29.1 bits (62), Expect = 5.2
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 3 ENSHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRK 62
+++ K +R A + + + LI ++L + +E KQ + + + R K
Sbjct: 28 DHNKKERRAAKKNPKKGSKKQKLIQIPNICPFKDDILKEVEEAKQRQEAERLAR-REAFK 86
Query: 63 TEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITK 111
E++ NK K L+ V + + HE+D D K+ KN +TK
Sbjct: 87 AEREQNKIKTLESMVEDADMRSTV--HGIMHENDAQDQDEKKYKNAVTK 133
>AE014297-2303|AAN13730.1| 581|Drosophila melanogaster CG3983-PB,
isoform B protein.
Length = 581
Score = 29.1 bits (62), Expect = 5.2
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 3 ENSHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRK 62
+++ K +R A + + + LI ++L + +E KQ + + + R K
Sbjct: 28 DHNKKERRAAKKNPKKGSKKQKLIQIPNICPFKDDILKEVEEAKQRQEAERLAR-REAFK 86
Query: 63 TEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITK 111
E++ NK K L+ V + + HE+D D K+ KN +TK
Sbjct: 87 AEREQNKFKTLESMVEDADMRSTV--HGIMHENDAQDQDEKKYKNAVTK 133
>AE014297-2302|AAF55384.3| 581|Drosophila melanogaster CG3983-PA,
isoform A protein.
Length = 581
Score = 29.1 bits (62), Expect = 5.2
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 3 ENSHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRNRK 62
+++ K +R A + + + LI ++L + +E KQ + + + R K
Sbjct: 28 DHNKKERRAAKKNPKKGSKKQKLIQIPNICPFKDDILKEVEEAKQRQEAERLAR-REAFK 86
Query: 63 TEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITK 111
E++ NK K L+ V + + HE+D D K+ KN +TK
Sbjct: 87 AEREQNKFKTLESMVEDADMRSTV--HGIMHENDAQDQDEKKYKNAVTK 133
>AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC,
isoform C protein.
Length = 1579
Score = 28.7 bits (61), Expect = 6.9
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 2 VENSHKRKRTASDDHNQTV-SLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRN 60
V++ + TA ++ +Q+ +L+G N K L S++ +H EE + + Q ++N
Sbjct: 990 VQSGNVVNHTALEELDQSPQNLKGSHNQKIVKSLVSDIQQNHNEELNSHQHQVKQANKQN 1049
Query: 61 RKTEQKINKSKDLQP----TVRKFETLNLEPDQADGHEDDIALNDRKQAKNK 108
T+Q +S L+P RK E + Q + + +D+++A N+
Sbjct: 1050 LNTKQNAAQSA-LKPINNENDRKREQTEEKKRQREERKRQQLEDDKRRALNE 1100
>AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB,
isoform B protein.
Length = 1579
Score = 28.7 bits (61), Expect = 6.9
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 2 VENSHKRKRTASDDHNQTV-SLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRN 60
V++ + TA ++ +Q+ +L+G N K L S++ +H EE + + Q ++N
Sbjct: 990 VQSGNVVNHTALEELDQSPQNLKGSHNQKIVKSLVSDIQQNHNEELNSHQHQVKQANKQN 1049
Query: 61 RKTEQKINKSKDLQP----TVRKFETLNLEPDQADGHEDDIALNDRKQAKNK 108
T+Q +S L+P RK E + Q + + +D+++A N+
Sbjct: 1050 LNTKQNAAQSA-LKPINNENDRKREQTEEKKRQREERKRQQLEDDKRRALNE 1100
>AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA,
isoform A protein.
Length = 1572
Score = 28.7 bits (61), Expect = 6.9
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 2 VENSHKRKRTASDDHNQTV-SLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRRN 60
V++ + TA ++ +Q+ +L+G N K L S++ +H EE + + Q ++N
Sbjct: 983 VQSGNVVNHTALEELDQSPQNLKGSHNQKIVKSLVSDIQQNHNEELNSHQHQVKQANKQN 1042
Query: 61 RKTEQKINKSKDLQP----TVRKFETLNLEPDQADGHEDDIALNDRKQAKNK 108
T+Q +S L+P RK E + Q + + +D+++A N+
Sbjct: 1043 LNTKQNAAQSA-LKPINNENDRKREQTEEKKRQREERKRQQLEDDKRRALNE 1093
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,069,112
Number of Sequences: 52641
Number of extensions: 458570
Number of successful extensions: 2048
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2000
Number of HSP's gapped (non-prelim): 47
length of query: 224
length of database: 24,830,863
effective HSP length: 82
effective length of query: 142
effective length of database: 20,514,301
effective search space: 2913030742
effective search space used: 2913030742
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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