Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001829-TA|BGIBMGA001829-PA|IPR006055|Exonuclease,
IPR013520|Exonuclease, RNase T and DNA polymerase III,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
(224 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 1.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 1.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 1.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 1.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 1.7
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 5.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 5.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 5.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 5.3
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 5.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 5.3
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 5.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 5.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 5.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 7.1
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 7.1
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 127 NDHMLARVSLVNKF-GDCIYDKFVKPREEVKDYRTI 161
N+ + + L+ + DC YDK +P E+ I
Sbjct: 4 NNSSMTQTELLQELTNDCRYDKMTRPPGEINSINPI 39
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 53
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 256 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 286
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K+K
Sbjct: 256 HNEKEKFLEERTSRKRYSRSREREQKLYKNK 286
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 44 EEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNL 85
+EK A + T K ++ + E+ I + T +F+T+ +
Sbjct: 144 DEKNAGNNKITMKSKKEQNAEEDIVDPVEENETYDEFDTIRI 185
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.3
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSKDLQPTVRK 79
H E+++ +E+ + K + R+R+ EQK K+++ RK
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRK 61
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.3
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSKDLQPTVRK 79
H E+++ +E+ + K + R+R+ EQK K+++ RK
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRK 61
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.3
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSKDLQPTVRK 79
H E+++ +E+ + K + R+R+ EQK K+++ RK
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRK 61
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.3
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSKDLQPTVRK 79
H E+++ +E+ + K + R+R+ EQK K+++ RK
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRK 61
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.3
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSKDLQPTVRK 79
H E+++ +E+ + K + R+R+ EQK K+++ RK
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRK 61
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.3
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSKDLQPTVRK 79
H E+++ +E+ + K + R+R+ EQK K+++ RK
Sbjct: 23 HNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRK 61
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 23 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 53
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 23 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 53
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 23 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 53
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 23 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 53
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 256 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 256 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 256 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 256 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 256 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 286
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 42 HKEEKQAPKEQYTGK-FRRNRKTEQKINKSK 71
H E+++ +E+ + K + R+R+ EQK+ K++
Sbjct: 245 HNEKEKLLEERTSCKRYSRSREREQKLYKNE 275
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 43 KEEKQAPKEQY 53
+EE Q PKEQY
Sbjct: 143 EEEAQKPKEQY 153
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 7.1
Identities = 14/71 (19%), Positives = 30/71 (42%)
Query: 59 RNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCE 118
RN + + + S + ++R ++TL D+ GH + + + NK+ +
Sbjct: 30 RNVEASGQRSVSSGFRSSLRNYKTLISSHDELPGHINCDSSKFEEDLMNKLPTTPEYNNH 89
Query: 119 MVGIGYDGNDH 129
+ G D D+
Sbjct: 90 LYGSTPDSRDY 100
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,930
Number of Sequences: 429
Number of extensions: 2575
Number of successful extensions: 37
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 32
length of query: 224
length of database: 140,377
effective HSP length: 55
effective length of query: 169
effective length of database: 116,782
effective search space: 19736158
effective search space used: 19736158
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)
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