Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001828-TA|BGIBMGA001828-PA|IPR007087|Zinc finger,
C2H2-type
(752 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 35 0.048
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 32 0.25
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 32 0.25
SPAC22H12.01c |mug35|SPAC23G3.13c|sequence orphan|Schizosaccharo... 30 1.0
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 30 1.0
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 30 1.4
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 29 3.1
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 29 3.1
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 4.1
SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 28 4.1
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 27 7.2
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 27 7.2
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 27 9.6
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 27 9.6
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 27 9.6
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 9.6
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 34.7 bits (76), Expect = 0.048
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 11/194 (5%)
Query: 3 ENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRI 62
E++E +N S L LS +D+ K + + + + ++S + L + +
Sbjct: 67 EDIEFFNENPSSLKYLSSINPEDLGKKVEKGPRPDIYDL-KKSQQFELDTSRLSSDEESV 125
Query: 63 IFQKRDSV-EVEYIFTTEKKSSLQRQRFNSLPVSEVPELLKNEFIAVENARQVHICTDCD 121
+ +DS E +Y SS + +N LP+ LL+N V N + ++ +
Sbjct: 126 LDYSKDSEDEQDYELRPRVSSSWNNESYNRLPIKTKDGLLQNVVADVNNGEE--FLSESE 183
Query: 122 VEIELNDEEPLMESLQKHFNLEVHLPKLKRESIDVAEPVILPNMSRRLSALECGEMPVLS 181
E L + + + QK + P+ I V + + + + A + E PV +
Sbjct: 184 SEASLEIDSDIKDEKQKSLEEQKIAPE-----IPVKQQIKNDKEALGIQAQQLLEEPVEN 238
Query: 182 LEQLRLRNPVEKLD 195
L +RN EK D
Sbjct: 239 LH--LIRNIFEKFD 250
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 542 PEYVAVPSFANIVEHFESNE-HMETVAKLLRLAVNNEVDKQFAALNKI 588
PE +A P+F N+ EH E + E + L + ++NE D A N +
Sbjct: 10 PEQIAEPTFENVSEHNEHDSGSAEAQVETLEVPLSNETDNDDATENAV 57
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 91 SLPVSEVPELLKNEFIAVENARQVHICTDCDVEIELNDEEP 131
++ +++PEL N+ NA +++ D DVEIEL +EEP
Sbjct: 350 AISATDIPEL--NDGFNTNNAAEINPEDDEDVEIELREEEP 388
>SPAC22H12.01c |mug35|SPAC23G3.13c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 224 IYQETYDKLCQDVSNIDFTN--QTSSVAPIIMSIRDNVYQNFSADANKNTDNDENEQSPE 281
+Y +T +L + S+ D T+ + V+P+ S + + + D N D +E+ +
Sbjct: 114 LYDKTQKQLLRRDSSGDLTSTDKERDVSPVSHSEKP-YWDRYDLDQPSNQDVEESRNLVQ 172
Query: 282 KPKAQTKKYRYYG 294
+PK ++KKY G
Sbjct: 173 EPKHRSKKYDRLG 185
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 30.3 bits (65), Expect = 1.0
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 587 KIEDLKCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANRADIISVYMKGNYILHSE 646
KI+ L+C++CN + NR+ + +H LN AD I + + +E
Sbjct: 91 KIKSLQCLFCNNEGLLNRQ---EWFEHSFHVHG-----LNIGLADNIVYINRLLEKIKNE 142
Query: 647 GASFTCVNCNGVFNSIRSLLMHLVHAEHFAYRPPAECTFRYYLELKHNINMLAKNKYVYY 706
SF C+ C+ + + L H+ + HF P + +Y+ IN + K +
Sbjct: 143 LESFRCLCCHVPCKNKKLLREHMNNKRHFRLDPKSSEYDEFYI-----INYASVTKSITI 197
Query: 707 SFGRF 711
S +F
Sbjct: 198 SHSQF 202
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 10/100 (10%)
Query: 577 EVDKQFA--ALNKIEDLKCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANRADIIS 634
E++ + A + ++ C++C F KH ++ H + E + + +
Sbjct: 192 EIEAELARRSSQRLSPRDCLFCAASFSSFDTCKKHMKAS--HSLYIPEREYLVDEPSLF- 248
Query: 635 VYMKGNYILHSEGASFTCVNCNGVFNSIRSLLMHLVHAEH 674
+Y+ FTC+ CN F S+ ++ H+ H
Sbjct: 249 -----DYLAEKISIGFTCLTCNREFKSLEAVRAHMQQKGH 283
Score = 27.5 bits (58), Expect = 7.2
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 14/100 (14%)
Query: 649 SFTCVNCNGVFNSIRSLLMHLVHAEHF-------AYRPP--AECTFRYYLELKHNINMLA 699
SF C C FN+ S +H H A PP AE L ++ N
Sbjct: 4 SFACTTCTVAFNNAESQKIHWKSDWHHYNLKRKVASLPPLSAEVFAGKILSIQKQ-NEEV 62
Query: 700 KNKYVYYSFGRFKCGVCDADIEEGENAKRHVLSPKHRENM 739
+ K +Y C VC+ H+ S KHR+N+
Sbjct: 63 QKKAEFYQ----NCEVCNKKFYSEGAYSSHMASKKHRDNL 98
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 200 SKLTNMLLKVLPDTSEASIAEALKIYQETYDKLCQDVSNI-DFTNQTSSVAPIIMSI 255
SK++ +L K+ PD + I + + T+ +L Q V I NQT S ++S+
Sbjct: 192 SKVSELLRKLSPDNEKPPIVQKIYFTSRTHSQLQQLVQEIKKLNNQTFSTPIRVVSL 248
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 28.7 bits (61), Expect = 3.1
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 4 NVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETHKRII 63
++ +ITK+ LT + KL ++K+ + F + I ++ S+ +Y K L+E ++
Sbjct: 115 SIPEITKDNLTLTEI-IAKLREMKEPIRLFGESEEATI-QRYYSLLKY-KKLEEIENELL 171
Query: 64 FQKRDSVEVEYIFTTEKKSSLQRQRFNSLPVSEVPELLK----NEFIAVENARQVHIC-- 117
+ ++++ E+ TT+ K S Q F + L N F + E+ Q+ I
Sbjct: 172 TKGVETIDFEHATTTKPKVSKQVVAFLQHGIRIWDNFLSSKSINSFESSESQMQLKIFRQ 231
Query: 118 --TDCDVEIELNDEEPLMESLQK 138
D DV I+L +E L + + K
Sbjct: 232 AKQDLDVLIQLIVDEALNDDIFK 254
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 599 DFRDNREAVKHALSNVYHQSAVAETKLNANRADIISVYMKGNYILHSEGASFTCVNCNGV 658
D N E K + N Y TKL +A + S +GN +L S N NG
Sbjct: 595 DVSKNIERKKETVHNTYRNLMSNRTKLEEMKASLSSSRSRGN-VLESLQRLHESDNLNGF 653
Query: 659 FNSIRSL 665
F + L
Sbjct: 654 FGRLGDL 660
>SPAC3F10.02c |trk1|sptrk|potassium ion transporter
Trk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 841
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 250 PIIMSIRDNV-YQNFSA-DANKNTDNDENEQSPEKPKAQTKKYRYYG 294
P + S+R +NFS D + +T+N +P PKA K Y+G
Sbjct: 151 PYLHSLRSPTSLKNFSRFDTHDSTNNPYFPDNPPSPKADISKDEYFG 197
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 337 DSVLSHVFSETHVHNLSCIMQSDKHIPFLMSETTIESIKEMNAKFLSGHNIT 388
DS+LSH S+T V + Q + L E E ++E + + S H+I+
Sbjct: 1795 DSMLSH--SDTLVRQALLVSQELIRVAILWHELWYEGLEEASQAYFSDHDIS 1844
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 27.5 bits (58), Expect = 7.2
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 4/147 (2%)
Query: 152 ESIDVAEPVILPNMSRRLSALECGEMPVLSLEQLRLRNPV---EKLDRNLCSKLTNMLLK 208
++I+ + + LP + L+ C E+ +E + E L NLC L LL
Sbjct: 269 DTIENNKDLDLPTQQQLLAQYRCDEIITEVMEPFSTACTILQKEFLPGNLCKDLPTKLLN 328
Query: 209 VLPDTSEASIAEALKIYQETYDKLCQD-VSNIDFTNQTSSVAPIIMSIRDNVYQNFSADA 267
+ EA +A + Y K Q+ ++++D A + ++ + F A
Sbjct: 329 MFETVIEAYDRQASRYNVHIYQKKKQELIASVDSHLYVFFQAQLNALHKELIKSFFDASN 388
Query: 268 NKNTDNDENEQSPEKPKAQTKKYRYYG 294
+D E S K K R G
Sbjct: 389 EFPSDTPFKESSSIKINELVNKMREEG 415
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 27.1 bits (57), Expect = 9.6
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 58 THKRIIFQKRDSVEVEYIFTTEKKSSLQRQRFNSLPVSEVPELLKNEFIAVENARQVHIC 117
T K + +S++ EY+ + E+ SSLQ F+ S P+L F ++ +R C
Sbjct: 68 TEKELYINVVNSLKREYVLSDEELSSLQ---FSLGLFSGAPKL--QAFSSIVQSRS---C 119
Query: 118 TDCDVEIELNDE 129
DCD ++L++E
Sbjct: 120 -DCDTWLQLDEE 130
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 91 SLPVSEVPELLKNEFIAVENARQVHICTDCDVE 123
SL VS+ P++++ E ++ +N R+VH +++
Sbjct: 463 SLNVSDFPQIVEQEELSSKNPRKVHFSDTLEIK 495
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 324 CIAC-EYYTLRFHYDSVLSHVFSETHVHNLSCIMQS 358
C C E+YT R ++ HV V N+ C++ S
Sbjct: 153 CFDCHEWYTCRHCHNDACDHVLERPAVENMLCMICS 188
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 254 SIRDNVYQNFSADANKNTDND-ENEQSPEKPKAQTKKYRYYG 294
S+++ +N + D +K++ E + S EKPKA K+ + YG
Sbjct: 31 SLKNKTEENKTIDKHKSSVGPKEPKSSLEKPKANRKRKQSYG 72
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.133 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,635,952
Number of Sequences: 5004
Number of extensions: 165634
Number of successful extensions: 568
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 558
Number of HSP's gapped (non-prelim): 18
length of query: 752
length of database: 2,362,478
effective HSP length: 78
effective length of query: 674
effective length of database: 1,972,166
effective search space: 1329239884
effective search space used: 1329239884
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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