Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001825-TA|BGIBMGA001825-PA|IPR006649|Like-Sm
ribonucleoprotein, eukaryotic and archaea-type, core,
IPR010920|Like-Sm ribonucleoprotein-related, core, IPR001163|Like-Sm
ribonucleoprotein, core
(139 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001620-1|AAN71375.1| 154|Drosophila melanogaster RE35747p pro... 192 1e-49
AE014134-1871|AAF52938.3| 154|Drosophila melanogaster CG17768-P... 192 1e-49
AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p pro... 54 5e-08
AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclea... 54 5e-08
AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA... 54 5e-08
AE014296-2128|AAF49929.1| 95|Drosophila melanogaster CG10418-P... 50 9e-07
AY071359-1|AAL48981.1| 124|Drosophila melanogaster RE39488p pro... 42 4e-04
AE014296-2169|AAF49893.1| 124|Drosophila melanogaster CG10753-P... 42 4e-04
L33341-1|AAA28445.1| 101|Drosophila melanogaster membrane-assoc... 38 0.004
AY118862-1|AAM50722.1| 88|Drosophila melanogaster GM23968p pro... 38 0.004
AE013599-1415|AAF58559.2| 88|Drosophila melanogaster CG16792-P... 38 0.004
M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein ( D.me... 33 0.10
M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein ( D.me... 33 0.10
J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein ( D.me... 33 0.10
J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein ( D.me... 33 0.10
AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p pro... 33 0.10
AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA... 33 0.10
AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB... 33 0.10
AY113474-1|AAM29479.1| 79|Drosophila melanogaster RE43665p pro... 33 0.18
AE013599-3092|AAF46645.1| 79|Drosophila melanogaster CG9344-PA... 33 0.18
AE014296-1382|AAF50478.1| 283|Drosophila melanogaster CG13675-P... 29 1.7
X89858-1|CAA61954.1| 1201|Drosophila melanogaster actin binding ... 29 2.3
AY069520-1|AAL39665.1| 1239|Drosophila melanogaster LD23793p pro... 29 2.3
AE013599-457|AAM71099.1| 1212|Drosophila melanogaster CG2092-PA,... 29 2.3
AE013599-456|AAF59225.3| 1239|Drosophila melanogaster CG2092-PB,... 29 2.3
AY119610-1|AAM50264.1| 825|Drosophila melanogaster LD34829p pro... 29 3.0
AE013599-2414|AAM68495.2| 810|Drosophila melanogaster CG6967-PB... 29 3.0
AE013599-2413|AAF57908.2| 825|Drosophila melanogaster CG6967-PA... 29 3.0
BT022961-1|AAY55377.1| 156|Drosophila melanogaster IP04234p pro... 28 5.2
BT022249-1|AAY54665.1| 137|Drosophila melanogaster IP04848p pro... 28 5.2
BT022238-1|AAY54654.1| 137|Drosophila melanogaster IP04948p pro... 28 5.2
AY128442-1|AAM75035.1| 1261|Drosophila melanogaster LD17208p pro... 28 5.2
AE013599-3148|AAF46688.1| 137|Drosophila melanogaster CG4279-PA... 28 5.2
AE013599-1809|AAM68567.2| 1251|Drosophila melanogaster CG6701-PA... 28 5.2
AE013599-1179|AAF58747.1| 141|Drosophila melanogaster CG12938-P... 28 5.2
>BT001620-1|AAN71375.1| 154|Drosophila melanogaster RE35747p
protein.
Length = 154
Score = 192 bits (468), Expect = 1e-49
Identities = 84/100 (84%), Positives = 94/100 (94%)
Query: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
MLPLSLL+TAQ+HPMLVELKNGETYNGHLVSCD+WMNINLR+VICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY 60
Query: 61 IRGSTIKYLRIPDEVIDMVKEETQVKARGRNEVSKGRGQN 100
IRGSTIKYLRIPDEVIDMVKE+ Q K+R R E++K RG N
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDAQAKSRNRTEMNKNRGGN 100
>AE014134-1871|AAF52938.3| 154|Drosophila melanogaster CG17768-PA,
isoform A protein.
Length = 154
Score = 192 bits (468), Expect = 1e-49
Identities = 84/100 (84%), Positives = 94/100 (94%)
Query: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
MLPLSLL+TAQ+HPMLVELKNGETYNGHLVSCD+WMNINLR+VICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY 60
Query: 61 IRGSTIKYLRIPDEVIDMVKEETQVKARGRNEVSKGRGQN 100
IRGSTIKYLRIPDEVIDMVKE+ Q K+R R E++K RG N
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDAQAKSRNRTEMNKNRGGN 100
>AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p
protein.
Length = 151
Score = 54.4 bits (125), Expect = 5e-08
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61
+P+ +L A+ H + E GE Y G L+ ++ MN + ++ T RDG + + YI
Sbjct: 5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYI 63
Query: 62 RGSTIKYLRIPDEV--IDMVKEET 83
RGS I++L +PD + M K++T
Sbjct: 64 RGSKIRFLILPDMLKNAPMFKKQT 87
>AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclear
ribonucleoproteinSm D3 protein.
Length = 151
Score = 54.4 bits (125), Expect = 5e-08
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61
+P+ +L A+ H + E GE Y G L+ ++ MN + ++ T RDG + + YI
Sbjct: 5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYI 63
Query: 62 RGSTIKYLRIPDEV--IDMVKEET 83
RGS I++L +PD + M K++T
Sbjct: 64 RGSKIRFLILPDMLKNAPMFKKQT 87
>AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA
protein.
Length = 151
Score = 54.4 bits (125), Expect = 5e-08
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61
+P+ +L A+ H + E GE Y G L+ ++ MN + ++ T RDG + + YI
Sbjct: 5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYI 63
Query: 62 RGSTIKYLRIPDEV--IDMVKEET 83
RGS I++L +PD + M K++T
Sbjct: 64 RGSKIRFLILPDMLKNAPMFKKQT 87
>AE014296-2128|AAF49929.1| 95|Drosophila melanogaster CG10418-PA
protein.
Length = 95
Score = 50.4 bits (115), Expect = 9e-07
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
ML S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 58
Query: 58 ECYIRGSTIKYLRIPDEVID 77
C+IRGS ++Y+++P + +D
Sbjct: 59 NCFIRGSVVRYVQLPGDEVD 78
>AY071359-1|AAL48981.1| 124|Drosophila melanogaster RE39488p
protein.
Length = 124
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 7 LRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTI 66
L + + +ELKNG +G + D MN +L+ V T ++ D + IRG+ I
Sbjct: 7 LMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDHV-HLETLSIRGNNI 65
Query: 67 KYLRIPDE-------VIDMVKEETQVKARGR-NEVSKGRG 98
+Y +PD + D K +T+ K GR +GRG
Sbjct: 66 RYFILPDSLPLETLLIDDTPKSKTKKKDSGRVGNRGRGRG 105
>AE014296-2169|AAF49893.1| 124|Drosophila melanogaster CG10753-PA
protein.
Length = 124
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 7 LRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTI 66
L + + +ELKNG +G + D MN +L+ V T ++ D + IRG+ I
Sbjct: 7 LMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPV-HLETLSIRGNNI 65
Query: 67 KYLRIPDE-------VIDMVKEETQVKARGR-NEVSKGRG 98
+Y +PD + D K +T+ K GR +GRG
Sbjct: 66 RYFILPDSLPLETLLIDDTPKSKTKKKDSGRVGNRGRGRG 105
>L33341-1|AAA28445.1| 101|Drosophila melanogaster
membrane-associated protein protein.
Length = 101
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 3 PLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNI---NLREVICTSRDGDKFWRMPEC 59
P L P+LV+LK G+ Y G LVS D +MN+ N EVI +G + E
Sbjct: 9 PKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVI----EGSVTGNLGEV 64
Query: 60 YIRGSTIKYLR 70
IR + + Y++
Sbjct: 65 LIRCNNVLYIK 75
>AY118862-1|AAM50722.1| 88|Drosophila melanogaster GM23968p
protein.
Length = 88
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 3 PLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNI---NLREVICTSRDGDKFWRMPEC 59
P L P+LV+LK G+ Y G LVS D +MN+ N EVI +G + E
Sbjct: 9 PKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVI----EGSVTGNLGEV 64
Query: 60 YIRGSTIKYLR 70
IR + + Y++
Sbjct: 65 LIRCNNVLYIK 75
>AE013599-1415|AAF58559.2| 88|Drosophila melanogaster CG16792-PA
protein.
Length = 88
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 3 PLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNI---NLREVICTSRDGDKFWRMPEC 59
P L P+LV+LK G+ Y G LVS D +MN+ N EVI +G + E
Sbjct: 9 PKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVI----EGSVTGNLGEV 64
Query: 60 YIRGSTIKYLR 70
IR + + Y++
Sbjct: 65 LIRCNNVLYIK 75
>M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein (
D.melanogaster ninaCencoded short protein mRNA, complete
cds. ).
Length = 1135
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI-RG 63
SL + A+N PM+VE+ + L+ ++ M ++ E++ SRD ++ PE ++ RG
Sbjct: 262 SLEKNAENRPMMVEMVE-HPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRG 320
Query: 64 STIKYLRIPDEV 75
++ P+++
Sbjct: 321 YVKRFDEKPEKM 332
>M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCencoded long protein mRNA, complete
cds. ).
Length = 1501
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI-RG 63
SL + A+N PM+VE+ + L+ ++ M ++ E++ SRD ++ PE ++ RG
Sbjct: 262 SLEKNAENRPMMVEMVE-HPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRG 320
Query: 64 STIKYLRIPDEV 75
++ P+++
Sbjct: 321 YVKRFDEKPEKM 332
>J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein (
D.melanogaster ninaCprotein genes, complete cds. ).
Length = 1135
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI-RG 63
SL + A+N PM+VE+ + L+ ++ M ++ E++ SRD ++ PE ++ RG
Sbjct: 262 SLEKNAENRPMMVEMVE-HPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRG 320
Query: 64 STIKYLRIPDEV 75
++ P+++
Sbjct: 321 YVKRFDEKPEKM 332
>J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCprotein genes, complete cds. ).
Length = 1501
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI-RG 63
SL + A+N PM+VE+ + L+ ++ M ++ E++ SRD ++ PE ++ RG
Sbjct: 262 SLEKNAENRPMMVEMVE-HPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRG 320
Query: 64 STIKYLRIPDEV 75
++ P+++
Sbjct: 321 YVKRFDEKPEKM 332
>AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p
protein.
Length = 1135
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI-RG 63
SL + A+N PM+VE+ + L+ ++ M ++ E++ SRD ++ PE ++ RG
Sbjct: 262 SLEKNAENRPMMVEMVE-HPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRG 320
Query: 64 STIKYLRIPDEV 75
++ P+++
Sbjct: 321 YVKRFDEKPEKM 332
>AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA,
isoform A protein.
Length = 1135
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI-RG 63
SL + A+N PM+VE+ + L+ ++ M ++ E++ SRD ++ PE ++ RG
Sbjct: 262 SLEKNAENRPMMVEMVE-HPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRG 320
Query: 64 STIKYLRIPDEV 75
++ P+++
Sbjct: 321 YVKRFDEKPEKM 332
>AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB,
isoform B protein.
Length = 1501
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI-RG 63
SL + A+N PM+VE+ + L+ ++ M ++ E++ SRD ++ PE ++ RG
Sbjct: 262 SLEKNAENRPMMVEMVE-HPFLTELIENEDEMRSDIAEMLELSRDVKTLYKEPELFVDRG 320
Query: 64 STIKYLRIPDEV 75
++ P+++
Sbjct: 321 YVKRFDEKPEKM 332
>AY113474-1|AAM29479.1| 79|Drosophila melanogaster RE43665p
protein.
Length = 79
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 14 PMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYL 69
P+ V+L NG Y G L D +MNI L + +G + + +IRG+ + Y+
Sbjct: 18 PVAVKLNNGVDYRGVLACLDGYMNICLEQTE-EYVNGQLKNKYGDAFIRGNNVLYI 72
>AE013599-3092|AAF46645.1| 79|Drosophila melanogaster CG9344-PA
protein.
Length = 79
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 14 PMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYL 69
P+ V+L NG Y G L D +MNI L + +G + + +IRG+ + Y+
Sbjct: 18 PVAVKLNNGVDYRGVLACLDGYMNICLEQTE-EYVNGQLKNKYGDAFIRGNNVLYI 72
>AE014296-1382|AAF50478.1| 283|Drosophila melanogaster CG13675-PA
protein.
Length = 283
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 21 NGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPE 58
NG +N + CD W N+N ++ D+ +R+PE
Sbjct: 63 NGTVFNQAVRVCDWWSNVNCEGSEQLYQNNDELYRIPE 100
>X89858-1|CAA61954.1| 1201|Drosophila melanogaster actin binding
protein protein.
Length = 1201
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 30 VSCDNWMNINLREVICTSRDGDKF--WRMPECYIRGSTIKYLRIPDE 74
V+C+ +++ + + D F W CY+ GS I Y + PD+
Sbjct: 1061 VNCELSVSVEYKGFLTMFEDISGFGAWHRRWCYLNGSVINYWKYPDD 1107
>AY069520-1|AAL39665.1| 1239|Drosophila melanogaster LD23793p protein.
Length = 1239
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 30 VSCDNWMNINLREVICTSRDGDKF--WRMPECYIRGSTIKYLRIPDE 74
V+C+ +++ + + D F W CY+ GS I Y + PD+
Sbjct: 1099 VNCELSVSVEYKGFLTMFEDISGFGAWHRRWCYLNGSVINYWKYPDD 1145
>AE013599-457|AAM71099.1| 1212|Drosophila melanogaster CG2092-PA,
isoform A protein.
Length = 1212
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 30 VSCDNWMNINLREVICTSRDGDKF--WRMPECYIRGSTIKYLRIPDE 74
V+C+ +++ + + D F W CY+ GS I Y + PD+
Sbjct: 1072 VNCELSVSVEYKGFLTMFEDISGFGAWHRRWCYLNGSVINYWKYPDD 1118
>AE013599-456|AAF59225.3| 1239|Drosophila melanogaster CG2092-PB,
isoform B protein.
Length = 1239
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 30 VSCDNWMNINLREVICTSRDGDKF--WRMPECYIRGSTIKYLRIPDE 74
V+C+ +++ + + D F W CY+ GS I Y + PD+
Sbjct: 1099 VNCELSVSVEYKGFLTMFEDISGFGAWHRRWCYLNGSVINYWKYPDD 1145
>AY119610-1|AAM50264.1| 825|Drosophila melanogaster LD34829p
protein.
Length = 825
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 4 LSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINL 40
+ L R ++HP +V L N YNG L + M++NL
Sbjct: 553 MRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNL 589
>AE013599-2414|AAM68495.2| 810|Drosophila melanogaster CG6967-PB,
isoform B protein.
Length = 810
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 4 LSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINL 40
+ L R ++HP +V L N YNG L + M++NL
Sbjct: 538 MRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNL 574
>AE013599-2413|AAF57908.2| 825|Drosophila melanogaster CG6967-PA,
isoform A protein.
Length = 825
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 4 LSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINL 40
+ L R ++HP +V L N YNG L + M++NL
Sbjct: 553 MRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNL 589
>BT022961-1|AAY55377.1| 156|Drosophila melanogaster IP04234p
protein.
Length = 156
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 11 QNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLR 70
Q H +L++L N + G + D M L + R+G + +R I+ +
Sbjct: 34 QGHSVLIDLHNETSVAGIIDVADGHMTCELTHAVFIDRNGGQH-PFDHFMVRNRMIRQIH 92
Query: 71 IPDEVIDMVKEETQVKARG 89
IP +D +E RG
Sbjct: 93 IP-SYLDAEQELRSAMERG 110
>BT022249-1|AAY54665.1| 137|Drosophila melanogaster IP04848p
protein.
Length = 137
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 MLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPE--CYIRGSTIKYL 69
++V L++G T G+L S D + N+ L+ I G+++ +P IRG + L
Sbjct: 21 LMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLL 77
>BT022238-1|AAY54654.1| 137|Drosophila melanogaster IP04948p
protein.
Length = 137
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 MLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPE--CYIRGSTIKYL 69
++V L++G T G+L S D + N+ L+ I G+++ +P IRG + L
Sbjct: 21 LMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLL 77
>AY128442-1|AAM75035.1| 1261|Drosophila melanogaster LD17208p
protein.
Length = 1261
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 6 LLRTAQNHPMLVELKNGETYNGHL 29
L+R ++HP +V L N Y GHL
Sbjct: 770 LIRNFRSHPEIVSLYNNMYYEGHL 793
>AE013599-3148|AAF46688.1| 137|Drosophila melanogaster CG4279-PA
protein.
Length = 137
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 MLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPE--CYIRGSTIKYL 69
++V L++G T G+L S D + N+ L+ I G+++ +P IRG + L
Sbjct: 21 LMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLL 77
>AE013599-1809|AAM68567.2| 1251|Drosophila melanogaster CG6701-PA
protein.
Length = 1251
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 6 LLRTAQNHPMLVELKNGETYNGHL 29
L+R ++HP +V L N Y GHL
Sbjct: 760 LIRNFRSHPEIVSLYNNMYYEGHL 783
>AE013599-1179|AAF58747.1| 141|Drosophila melanogaster CG12938-PA
protein.
Length = 141
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 11 QNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLR 70
Q H +L++L N + G + D M L + R+G + +R I+ +
Sbjct: 24 QGHSVLIDLHNETSVAGIIDVADGHMTCELTHAVFIDRNGGQH-PFDHFMVRNRMIRQIH 82
Query: 71 IPDEVIDMVKEETQVKARG 89
IP +D +E RG
Sbjct: 83 IP-SYLDAEQELRSAMERG 100
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.318 0.134 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,586,760
Number of Sequences: 52641
Number of extensions: 202005
Number of successful extensions: 515
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 479
Number of HSP's gapped (non-prelim): 35
length of query: 139
length of database: 24,830,863
effective HSP length: 78
effective length of query: 61
effective length of database: 20,724,865
effective search space: 1264216765
effective search space used: 1264216765
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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