Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001824-TA|BGIBMGA001824-PA|undefined
(269 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|ch... 30 0.30
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 30 0.30
SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr 1|||M... 29 0.93
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 28 1.6
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 28 1.6
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 27 3.7
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 27 3.7
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 5.0
SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase Mpg1|Sc... 26 5.0
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 26 5.0
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 6.6
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 6.6
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 26 6.6
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 26 6.6
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 26 6.6
SPBC215.05 |gpd1||glycerol-3-phosphate dehydrogenase Gpd1|Schizo... 25 8.7
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 25 8.7
SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|c... 25 8.7
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 8.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 8.7
>SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 232
Score = 30.3 bits (65), Expect = 0.30
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 35 TYEGHAEVNEKAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDE 87
T EG + N K T PN D D ++ DD + VP SA +N ++ NIDE
Sbjct: 5 TIEG--DENRKENTKSNTKPNFDDLDDLDDILDD-LDVP-SAFKNEEKKNIDE 53
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 30.3 bits (65), Expect = 0.30
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 40 AEVNEKAMTDVKLTPNVGDATDA--PNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDF 97
AE N+ AM+ T +V + A P +T D P D+ N+DE K
Sbjct: 129 AEANDAAMSSSAPTVDVSEGNSAAEPKITPDDSDTPRLNVDMNDKINVDEAAAKS--DSK 186
Query: 98 LERQNVNFETEAPKDV 113
L +N TE+ K V
Sbjct: 187 LNVDQINSTTESEKRV 202
>SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 28.7 bits (61), Expect = 0.93
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 58 DATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVNFETEAPKDVLFIK 117
D D +T V + +S+E VD +E KK I + L+ NV +TE P + K
Sbjct: 100 DEIDFQLITSKVTKLIDSSEIEVDAEPKEE--NKKEIPEKLK--NVKVDTENPSAEPYTK 155
Query: 118 AKNNEDIEKTTKAETRRHGTDTRKLKIKSLNCAELDCNN 156
AK + K K +R R S L CNN
Sbjct: 156 AKGDVSFLKFQKRLSRAPDQIMRYYHATSNEFPGLWCNN 194
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 155 NNTQDSEYVWDKHTRVNSWSLSMGI 179
N T +S + W ++V+S+++SMG+
Sbjct: 843 NRTDESVFAWANKSKVSSFTVSMGV 867
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 27.9 bits (59), Expect = 1.6
Identities = 8/28 (28%), Positives = 19/28 (67%)
Query: 226 VAWYMRPLSECVGGKKADLQQNRAFVNW 253
++W++ L C+GGKK+ + + + V++
Sbjct: 267 LSWFLNTLHNCLGGKKSTIAKPTSIVHY 294
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 118 AKNNEDIEKTTKAETRRHGTDTRKLKIKSLNCAELDC 154
A N ++ K T +++H D L++ ++C +DC
Sbjct: 451 AYNYQNDPKATLGFSKKHSVDLSSLRMCMVDCLNVDC 487
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 26.6 bits (56), Expect = 3.7
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 19 LDSRCHIPKNNSDVFVTYEGHAEVNEKAMTDV---KLTPNVGDATDAPNVTDDV--IFVP 73
L+ +P N V V+ G +N D+ ++ P T+A + DD + V
Sbjct: 279 LEGSVVVPGYNKPVLVS--GRENLNRAVQGDIVCIQILPQDQWKTEAEEIADDDEDVVVS 336
Query: 74 NSAERNVDRFNIDEIITKK 92
+AE + R N E+ITK+
Sbjct: 337 TAAEPDSARINDLELITKR 355
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein
ligase E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 53 TPNVGDATDAPNVTDDVIFVPN--SAERNVDRFNIDEII--TKK 92
TPN+ + + ++T+ +F+PN S N R N E + TKK
Sbjct: 9 TPNLPNLIHSESITNSPVFIPNLRSKSDNKHRLNTSEELPFTKK 52
>SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase
Mpg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 5.0
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Query: 15 PFFILDSRCHIPKNNSDVFVTYEGHAEVNEKAMTDVKLTPNVGDATDAPNVTDDVI--FV 72
PFF+L+S +D+ ++ H +T V+ G PN ++ +I FV
Sbjct: 103 PFFVLNSDVICEYPFADLAAFHKAHGAEGTIVVTKVEEPSKYGVVVHYPN-SESLIERFV 161
Query: 73 PNSAERNVDRFNIDEIITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIE 125
E +R N I ++ D +E + + E E ++ K ++ D+E
Sbjct: 162 EKPVEFVSNRINGGIYILNPSVLDRIEPRPTSIEKEVFPAMVNDKQLHSFDLE 214
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 42 VNEKAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAE---RNVDRFNIDEII 89
+ E ++ + + PN+ + ++ D++ F+P +AE ++R N D I+
Sbjct: 116 LRESSVHTILINPNIATIQSSHSLADEIYFLPVTAEYLTHLIERENPDGIL 166
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 25.8 bits (54), Expect = 6.6
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 16/86 (18%)
Query: 79 NVDRFNIDE-IITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIEKTTKAETRRHGT 137
N ++F +DE ++ + I +ERQ + AK IE+T + T
Sbjct: 605 NTNKFTVDETLLIGQAIYQTMERQGE------------LVAKFYGQIEQTCLSMLNNENT 652
Query: 138 DTRKLKIKSLNCAELDCNNTQDSEYV 163
D +KI SLN A L C T ++
Sbjct: 653 D---IKISSLNIARLLCQMTSSDAFI 675
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 25.8 bits (54), Expect = 6.6
Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 40 AEVNEKAMTDVKLTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLE 99
++V+++ T L N ++ VT+D F + N D I + +I D
Sbjct: 538 SDVDDEVATIRSLKQNNATNSEVETVTNDPSFSQQPGTHSRILRNFDAISSIDSIPDSFS 597
Query: 100 RQNVNFETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLKIK 145
V+ ++ K L K ++N ++ + AE ++ K+ +K
Sbjct: 598 DSAVDLPVDSSKYTLVGKTQSNSNLLQ-DNAEKHISKSNLEKVDVK 642
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 25.8 bits (54), Expect = 6.6
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 77 ERNVDRFNIDEIIT--KKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDI-----EKTTK 129
+R D +D++I K+ + E N N + + +K K ED EK +
Sbjct: 24 KRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQKEIGLKMKAKEDASELLEEKNSL 83
Query: 130 AETRRHGTDTRKLKIKS-LNCAELDCNNTQDSEYVW---DKHTRVNSWSLS-MGINGRYC 184
E +++ + K K LN N DS V D + + W+ + + + C
Sbjct: 84 TERKKNLIEQETAKNKEMLNVVSSIGNIVHDSVPVSMDEDNNEIIRKWAPEGVTVEKKNC 143
Query: 185 -THTCPTSCPDSYDPQCAISQTGQKKVFANHCKMDYNSCL--YGV 226
+H + D YDP+ + +G + F + +N L YG+
Sbjct: 144 LSHHEVLTRLDGYDPERGVKVSGHRGYFLRQYGVFFNLALIQYGL 188
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 123 DIEKTTKAETRRHGTDTRKLKIKSLNC 149
DIE+ K R HG D ++L I LNC
Sbjct: 748 DIERALKM-VRVHGPDQQELYIMMLNC 773
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 138 DTRKLKIKSLNCAELDCNNTQDSEYVWDK-HTRVNSWSL--SMGINGRYCTHT 187
DT++ +I L + LD N+TQ + + + VN+WS+ S N + H+
Sbjct: 339 DTKRFEILQLISSVLDWNDTQREQTGLQRPGSSVNNWSIPHSASSNSLFSDHS 391
>SPBC215.05 |gpd1||glycerol-3-phosphate dehydrogenase
Gpd1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 385
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 88 IITKKTIGDF---LERQNVNFETEAPKDVLFIKAKNNEDIEKTTKAET 132
++TK + DF N+++E PKD++ + ED E ET
Sbjct: 337 LLTKDMVKDFPLFTAVYNISYEDMDPKDLIIVLQPLKEDSENEGGTET 384
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.4 bits (53), Expect = 8.7
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 55 NVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVNFETEAPKDVL 114
N ++T + DD+I P S + F+ + T+ T GD+L+ V+ +++
Sbjct: 132 NEDESTTFKDEEDDLIS-PKSYLTSSKTFSYPKAPTESTNGDYLDEDYVDGQSDPESSNA 190
Query: 115 FIK--AKNNEDIEKTTKAETRRHGTDTRKLK 143
A + +D+ K R G RK++
Sbjct: 191 SDSDFADSPDDLTKVRSPIPSRRGRRKRKMR 221
>SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 25.4 bits (53), Expect = 8.7
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 119 KNNEDIEKTTKAETRRHGTDTRKLKIKSLNCAELDCNNTQDSEYVWDKHTRVNSWSLSMG 178
+ N+D KT + + D +++ K + N DS + + + SWSL+
Sbjct: 99 QGNKDT-KTALTKKYKSNEDVSRMRKKGNKYPQCKSKNLYDSLKLEEC---IESWSLNQK 154
Query: 179 INGRYCTHTCPTSCPDSYDPQC 200
N + HT S DS C
Sbjct: 155 QNENFYEHTHLNSRDDSNPSSC 176
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.4 bits (53), Expect = 8.7
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 58 DATDAPNVTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQNVNFETEAPKDVLFIK 117
D+ N+ DD + + N + +N D F K L+R N N + + + +
Sbjct: 872 DSVGLTNLQDDWVAIRNKSSQNGDMFL--RCFFKTEFITTLKRINRNIQVIVGPTIQYCR 929
Query: 118 AKNNEDIEKTTKAETRR 134
KT K ET +
Sbjct: 930 KPGKVQTVKTAKDETTK 946
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 103 VNFETEAPKDVLFIKAKNNEDIEKTTKAETRRHGTDTRKLKIK 145
+N E E KDV+ + + NE ++ A + H T ++ +++
Sbjct: 683 LNKEVEDQKDVILSQKRTNETLKTEIDALQKSHVTQIQRSEVE 725
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,362,127
Number of Sequences: 5004
Number of extensions: 60404
Number of successful extensions: 162
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 157
Number of HSP's gapped (non-prelim): 21
length of query: 269
length of database: 2,362,478
effective HSP length: 72
effective length of query: 197
effective length of database: 2,002,190
effective search space: 394431430
effective search space used: 394431430
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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