Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001824-TA|BGIBMGA001824-PA|undefined
(269 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88184-10|AAK31514.2| 728|Caenorhabditis elegans Hypothetical p... 31 0.65
U88184-9|ABC71833.1| 843|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 31 0.87
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 31 1.1
U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical pr... 28 8.1
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 28 8.1
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 8.1
>U88184-10|AAK31514.2| 728|Caenorhabditis elegans Hypothetical
protein F36H5.3a protein.
Length = 728
Score = 31.5 bits (68), Expect = 0.65
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 31 DVFVTYEGHAEVNEKAMTDVK-LTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEII 89
D +VT E H E+ + D+ L P++ +A D F + N+ RF DE
Sbjct: 394 DDYVTIEAHVEIYDIVEKDIDLLAPSLSNALDEQTFYAGSFFSAFTIS-NISRFEDDE-- 450
Query: 90 TKKTIGDFLERQNVNFETEAPKDVLFIKAK---NNEDIEKTTK 129
K G+ +R N+ + A K F++ + E+I T K
Sbjct: 451 --KQWGNTEKRYNIPWRLRAKKSFDFLEINLFCDEENIMTTNK 491
>U88184-9|ABC71833.1| 843|Caenorhabditis elegans Hypothetical
protein F36H5.3b protein.
Length = 843
Score = 31.5 bits (68), Expect = 0.65
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 31 DVFVTYEGHAEVNEKAMTDVK-LTPNVGDATDAPNVTDDVIFVPNSAERNVDRFNIDEII 89
D +VT E H E+ + D+ L P++ +A D F + N+ RF DE
Sbjct: 394 DDYVTIEAHVEIYDIVEKDIDLLAPSLSNALDEQTFYAGSFFSAFTIS-NISRFEDDE-- 450
Query: 90 TKKTIGDFLERQNVNFETEAPKDVLFIKAK---NNEDIEKTTK 129
K G+ +R N+ + A K F++ + E+I T K
Sbjct: 451 --KQWGNTEKRYNIPWRLRAKKSFDFLEINLFCDEENIMTTNK 491
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 31.1 bits (67), Expect = 0.87
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 22/199 (11%)
Query: 19 LDSRCHIPKNNS--DVFVTYEGHAEVNEKAMTDVKLTPNVGDATDAPNVTDDVIFVPNSA 76
LDS C +P NS + FV E + + K++ + ++ + + N+T I V
Sbjct: 633 LDSPCALPAENSPDESFVCLE---DQSTKSLCEYQMLSCIFERGYGVNLTVQYIGVCCPP 689
Query: 77 ERNVDRFNIDEIITKKTIGDFLERQNVNFET------EAPKDVLFIKAKNNEDIEKTTKA 130
+ D D + T FL +N E + PK V+ + +D+ +
Sbjct: 690 VESCDTEKPDPVCTDSG-ATFLTECELNIENCKLKKLDQPKLVVVSQGICEKDMLTDDFS 748
Query: 131 ETRRHGTDTRKLKIKS-LNCAELDCNNTQDSEYVWDKHTRVNSWSL--------SMGING 181
R + K ++ NC+ ++C+N+ D + T N+ SL + I
Sbjct: 749 SNRNFQKPNIEFKRENTFNCS-MECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEV 807
Query: 182 RYCTHTCPTSCPDSYDPQC 200
Y C T+CP + P C
Sbjct: 808 AYTGMCCDTNCPSDFSPVC 826
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 188 CPTSCPDSYDPQCAISQTGQKKVFANHCKMDYNSCL 223
C +CP Y P CA GQ V N C++D CL
Sbjct: 868 CNNACPKEYSPVCA--SNGQNIV--NECELDKIRCL 899
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 144 IKSLNCAELDCNNTQDSEYVWDKHTRVNSWSLSMGINGRYCTHTCPTSCPDSYDPQCAIS 203
I+S C C+NTQ S + + + S S S+ + + T C +C S QC +
Sbjct: 44 IQSQTCT---CHNTQQSTSASNCNCVLKSNSKSVPVTIKVSTKLCAPACQQSCSQQCQDN 100
Query: 204 QT 205
QT
Sbjct: 101 QT 102
>U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical
protein C48B6.2 protein.
Length = 183
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 84 NIDEIITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIEKTTKA-ETRRHGTD 138
NI + KT D +E+ +V T+ D F+ +++ED+ TKA + ++H D
Sbjct: 116 NIGMCESVKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMITWTKASKIKKHVMD 171
>Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical
protein F35G12.12 protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 71 FVPNSAERNVDRFNI-DEIITKKTIGDFLERQNVNFETEAPKDVLFIKAKNNEDIEKTTK 129
+ P+ A R + + D++ +G F ++ F EA K+ L K+++D+E T
Sbjct: 278 YFPDLARRLMLEIRMFDQLSVVSRLGAFDHFASMCFSVEA-KETLEDMFKDSKDLENTLG 336
Query: 130 AETRRHGTDTRKLKIKSLNCAELDCNNTQD 159
A T +LK ++L L NT +
Sbjct: 337 AAGAACTMGTMELKCRTLQAVTLLFQNTTE 366
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 188 CPTSCPDSYDPQCAISQTGQKKVFANHCKMDYNSC 222
CP C D P CA + + F N C+M SC
Sbjct: 393 CPNRCEDVMRPVCATN----GETFDNECEMKKKSC 423
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 65 VTDDVIFVPNSAERNVDRFNIDEIITKKTIGDFLERQ--NVNFETEAPKD----VLFIKA 118
+TDD I V + + + F+I+E + GD E + NV F+++ +D V IK
Sbjct: 159 LTDDRIAVLINLSKKISDFSIEEENKPEGDGDIYENEGVNVQFDSDEEEDDGGMVNEIKG 218
Query: 119 KNNEDIEKTTKAET 132
+ E+ E+ +T
Sbjct: 219 DSEEESEEEEGVDT 232
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.134 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,415,141
Number of Sequences: 27539
Number of extensions: 334712
Number of successful extensions: 880
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 876
Number of HSP's gapped (non-prelim): 13
length of query: 269
length of database: 12,573,161
effective HSP length: 80
effective length of query: 189
effective length of database: 10,370,041
effective search space: 1959937749
effective search space used: 1959937749
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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