GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001823-TA|BGIBMGA001823-PA|IPR003579|Ras small GTPase,
Rab type, IPR013753|Ras
         (131 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            56   3e-10
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   4.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   4.4  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    22   7.8  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    22   7.8  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 56.4 bits (130), Expect = 3e-10
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 4   IYYRGAHAAIICYEPSSHESWTRLRHWLHEL-RTVEDSCKVYLCGTKKDLLDGGFVKREV 62
           +YYRGA AAI+ Y+  + +S+ R + W+ EL R    +  + L G K DL +   V  E 
Sbjct: 92  MYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEE 151

Query: 63  AEEIVNTYSQDLNGHFL-TSSKTGENVDELFQKIVDDL 99
           A++    Y+ D    F+ TS+KT  NV+++F  I   L
Sbjct: 152 AKQ----YADDNRLLFMETSAKTAVNVNDIFLAIAKKL 185


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 97  DDLAADVEVMKTVTESRLLLT 117
           +DL  DVE MKT+ E    L+
Sbjct: 736 NDLTDDVECMKTIYEEHTRLS 756


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/44 (22%), Positives = 24/44 (54%)

Query: 78  FLTSSKTGENVDELFQKIVDDLAADVEVMKTVTESRLLLTELDK 121
           F+  ++    V++ FQ+ V + +++  +  +V   +  L EL+K
Sbjct: 90  FIIKTEAEGEVEKTFQRSVINASSEYRINGSVVSPQHYLAELEK 133


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)

Query: 108 TVTESRLLLTELDK 121
           T+ E RLL+ ELDK
Sbjct: 520 TMDEQRLLMIELDK 533


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)

Query: 108 TVTESRLLLTELDK 121
           T+ E RLL+ ELDK
Sbjct: 519 TMDEQRLLMIELDK 532


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.133    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,650
Number of Sequences: 2123
Number of extensions: 4910
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 5
length of query: 131
length of database: 516,269
effective HSP length: 58
effective length of query: 73
effective length of database: 393,135
effective search space: 28698855
effective search space used: 28698855
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)